####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS086_2-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS086_2-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 39 2 - 40 4.95 7.81 LONGEST_CONTINUOUS_SEGMENT: 39 3 - 41 4.83 7.79 LCS_AVERAGE: 85.69 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 19 7 - 25 1.87 10.70 LCS_AVERAGE: 33.73 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 7 - 18 0.82 11.36 LCS_AVERAGE: 19.32 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 4 39 0 3 4 6 6 9 12 12 14 16 18 19 21 24 30 33 36 37 39 40 LCS_GDT V 3 V 3 3 7 39 0 5 6 6 9 10 12 15 19 22 27 29 33 35 37 38 39 39 39 40 LCS_GDT Q 4 Q 4 5 7 39 2 5 7 10 10 14 15 19 23 26 29 31 34 35 37 38 39 39 39 40 LCS_GDT G 5 G 5 5 7 39 2 7 9 11 15 18 21 25 29 31 33 33 34 35 37 38 39 39 39 40 LCS_GDT P 6 P 6 5 15 39 3 5 5 6 9 17 21 25 29 31 33 33 34 35 37 38 39 39 39 40 LCS_GDT W 7 W 7 12 19 39 3 11 12 14 17 20 21 25 29 31 33 33 34 35 37 38 39 39 39 40 LCS_GDT V 8 V 8 12 19 39 6 11 12 14 17 20 21 25 29 31 33 33 34 35 37 38 39 39 39 40 LCS_GDT G 9 G 9 12 19 39 8 11 12 14 17 20 21 25 29 31 33 33 34 35 37 38 39 39 39 40 LCS_GDT S 10 S 10 12 19 39 8 11 12 14 17 20 21 25 29 31 33 33 34 35 37 38 39 39 39 40 LCS_GDT S 11 S 11 12 19 39 8 11 12 14 17 20 21 25 29 31 33 33 34 35 37 38 39 39 39 40 LCS_GDT Y 12 Y 12 12 19 39 8 11 12 14 17 20 21 25 29 31 33 33 34 35 37 38 39 39 39 40 LCS_GDT V 13 V 13 12 19 39 8 11 12 14 17 20 21 25 29 31 33 33 34 35 37 38 39 39 39 40 LCS_GDT A 14 A 14 12 19 39 8 11 12 14 17 20 21 25 29 31 33 33 34 35 37 38 39 39 39 40 LCS_GDT E 15 E 15 12 19 39 8 11 12 14 17 20 21 25 29 31 33 33 34 35 37 38 39 39 39 40 LCS_GDT T 16 T 16 12 19 39 8 11 12 14 17 20 21 25 29 31 33 33 34 35 37 38 39 39 39 40 LCS_GDT G 17 G 17 12 19 39 4 11 12 14 17 20 21 25 29 31 33 33 34 35 37 38 39 39 39 40 LCS_GDT Q 18 Q 18 12 19 39 0 4 11 12 15 17 20 24 29 31 33 33 34 35 37 38 39 39 39 40 LCS_GDT N 19 N 19 11 19 39 3 10 11 14 17 20 21 25 29 31 33 33 34 35 37 38 39 39 39 40 LCS_GDT W 20 W 20 11 19 39 4 10 12 14 17 20 21 25 29 31 33 33 34 35 37 38 39 39 39 40 LCS_GDT A 21 A 21 11 19 39 4 10 11 14 17 20 21 25 29 31 33 33 34 35 37 38 39 39 39 40 LCS_GDT S 22 S 22 11 19 39 4 10 11 14 17 20 21 25 29 31 33 33 34 35 37 38 39 39 39 40 LCS_GDT L 23 L 23 11 19 39 5 10 11 14 17 20 21 25 29 31 33 33 34 35 37 38 39 39 39 40 LCS_GDT A 24 A 24 11 19 39 5 10 11 14 17 20 21 25 29 31 33 33 34 35 37 38 39 39 39 40 LCS_GDT A 25 A 25 11 19 39 5 10 11 14 17 20 21 25 29 31 33 33 34 35 37 38 39 39 39 40 LCS_GDT N 26 N 26 11 17 39 5 10 11 14 16 20 21 25 29 31 33 33 34 35 37 38 39 39 39 40 LCS_GDT E 27 E 27 11 17 39 5 10 11 14 16 20 21 25 29 31 33 33 34 35 37 38 39 39 39 40 LCS_GDT L 28 L 28 11 17 39 4 10 11 14 15 20 21 25 29 31 33 33 34 35 37 38 39 39 39 40 LCS_GDT R 29 R 29 11 17 39 4 8 11 14 15 18 21 25 29 31 33 33 34 35 37 38 39 39 39 40 LCS_GDT V 30 V 30 11 17 39 4 8 11 14 15 18 21 25 29 31 33 33 34 35 37 38 39 39 39 40 LCS_GDT T 31 T 31 9 17 39 4 5 11 13 14 18 21 24 29 31 33 33 34 35 37 38 39 39 39 40 LCS_GDT E 32 E 32 6 17 39 4 6 6 8 12 15 19 23 29 31 33 33 34 35 37 38 39 39 39 40 LCS_GDT R 33 R 33 6 17 39 4 6 11 13 14 18 21 24 29 31 33 33 34 35 37 38 39 39 39 40 LCS_GDT P 34 P 34 6 17 39 4 6 6 7 14 18 21 24 29 31 33 33 34 35 37 38 39 39 39 40 LCS_GDT F 35 F 35 6 17 39 4 6 11 13 14 18 21 24 29 31 33 33 34 35 37 38 39 39 39 40 LCS_GDT W 36 W 36 6 17 39 4 6 11 13 14 18 21 24 26 30 33 33 34 35 37 38 39 39 39 40 LCS_GDT I 37 I 37 6 17 39 3 6 10 13 14 18 21 24 26 29 33 33 34 35 37 38 39 39 39 40 LCS_GDT S 38 S 38 4 6 39 3 4 4 5 6 13 18 22 26 27 29 30 31 35 37 38 39 39 39 40 LCS_GDT S 39 S 39 4 6 39 3 4 4 5 7 12 15 22 26 27 29 30 31 34 37 38 39 39 39 40 LCS_GDT F 40 F 40 4 6 39 3 4 4 5 6 8 13 18 26 27 29 30 31 34 35 38 39 39 39 40 LCS_GDT I 41 I 41 4 6 39 3 4 4 5 8 13 18 22 26 27 29 30 31 32 35 37 39 39 39 40 LCS_GDT G 42 G 42 4 6 35 3 4 4 5 6 7 9 11 14 20 22 24 28 29 30 31 31 32 34 34 LCS_GDT R 43 R 43 4 6 34 3 4 4 4 6 7 7 9 12 12 14 14 19 19 26 28 31 32 34 34 LCS_GDT S 44 S 44 4 6 15 0 3 4 4 6 6 6 9 10 11 12 14 15 15 16 17 18 19 24 25 LCS_GDT K 45 K 45 4 6 15 0 3 4 4 6 6 6 6 10 11 12 14 15 15 16 17 17 19 20 20 LCS_AVERAGE LCS_A: 46.25 ( 19.32 33.73 85.69 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 8 11 12 14 17 20 21 25 29 31 33 33 34 35 37 38 39 39 39 40 GDT PERCENT_AT 18.18 25.00 27.27 31.82 38.64 45.45 47.73 56.82 65.91 70.45 75.00 75.00 77.27 79.55 84.09 86.36 88.64 88.64 88.64 90.91 GDT RMS_LOCAL 0.29 0.53 0.70 1.21 1.57 2.12 2.20 2.67 3.17 3.33 3.54 3.54 3.74 3.93 4.42 4.60 4.83 4.83 4.83 5.15 GDT RMS_ALL_AT 12.04 11.81 11.76 7.98 11.04 9.73 9.83 9.01 8.71 8.54 8.39 8.39 8.34 8.27 7.97 7.88 7.79 7.79 7.79 7.73 # Checking swapping # possible swapping detected: E 15 E 15 # possible swapping detected: E 32 E 32 # possible swapping detected: F 35 F 35 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 14.793 0 0.668 0.609 16.684 0.000 0.000 - LGA V 3 V 3 8.595 0 0.088 1.055 10.731 0.000 0.000 5.156 LGA Q 4 Q 4 7.189 0 0.700 0.962 10.932 0.000 0.000 10.932 LGA G 5 G 5 3.487 0 0.050 0.050 5.831 6.364 6.364 - LGA P 6 P 6 3.398 0 0.048 0.120 4.572 19.545 15.584 3.326 LGA W 7 W 7 3.507 0 0.411 1.210 14.841 17.727 5.065 14.841 LGA V 8 V 8 3.618 0 0.115 0.160 3.901 14.545 12.987 3.901 LGA G 9 G 9 3.065 0 0.051 0.051 3.419 31.364 31.364 - LGA S 10 S 10 2.288 0 0.106 0.667 3.046 49.545 44.545 1.653 LGA S 11 S 11 1.915 0 0.019 0.051 2.989 50.909 43.030 2.989 LGA Y 12 Y 12 2.038 0 0.106 1.107 7.538 41.364 19.091 7.538 LGA V 13 V 13 0.975 0 0.016 0.057 2.221 59.091 64.416 1.721 LGA A 14 A 14 2.204 0 0.035 0.036 3.819 31.818 35.636 - LGA E 15 E 15 4.051 0 0.057 1.103 5.722 7.727 6.667 3.856 LGA T 16 T 16 3.723 0 0.032 0.073 4.115 10.909 15.065 2.283 LGA G 17 G 17 3.525 0 0.671 0.671 3.571 14.545 14.545 - LGA Q 18 Q 18 4.645 0 0.299 1.334 10.831 9.091 4.040 10.264 LGA N 19 N 19 1.873 0 0.640 1.032 6.246 62.273 33.409 3.550 LGA W 20 W 20 0.998 0 0.064 1.056 5.349 65.909 42.597 3.560 LGA A 21 A 21 2.089 0 0.047 0.052 2.534 41.364 38.545 - LGA S 22 S 22 2.204 0 0.154 0.226 2.450 41.364 40.303 2.450 LGA L 23 L 23 0.935 0 0.081 0.105 1.435 77.727 73.636 1.217 LGA A 24 A 24 0.784 0 0.024 0.032 1.136 77.727 75.273 - LGA A 25 A 25 1.087 0 0.058 0.059 1.663 65.909 65.818 - LGA N 26 N 26 1.457 0 0.040 0.134 2.310 59.091 53.409 1.777 LGA E 27 E 27 1.580 0 0.068 0.155 2.163 51.364 52.929 2.163 LGA L 28 L 28 2.028 0 0.050 0.195 3.203 33.636 44.091 1.845 LGA R 29 R 29 3.893 0 0.101 1.567 6.497 8.636 6.612 3.932 LGA V 30 V 30 4.190 0 0.073 0.084 4.782 5.909 7.792 4.656 LGA T 31 T 31 6.756 0 0.664 0.952 10.412 0.000 0.000 7.960 LGA E 32 E 32 6.977 0 0.680 1.108 8.699 0.000 0.000 8.142 LGA R 33 R 33 7.088 0 0.024 1.348 13.477 0.000 0.000 13.477 LGA P 34 P 34 7.576 0 0.291 0.317 8.853 0.000 0.000 8.704 LGA F 35 F 35 6.265 0 0.058 1.118 6.579 0.000 4.463 3.322 LGA W 36 W 36 7.709 0 0.669 1.057 15.642 0.000 0.000 14.857 LGA I 37 I 37 7.865 0 0.056 0.954 10.809 0.000 0.000 5.448 LGA S 38 S 38 11.730 0 0.034 0.081 14.733 0.000 0.000 10.935 LGA S 39 S 39 13.585 0 0.047 0.110 15.687 0.000 0.000 11.658 LGA F 40 F 40 12.106 0 0.119 1.082 14.434 0.000 0.000 11.333 LGA I 41 I 41 13.316 0 0.219 0.661 17.319 0.000 0.000 9.774 LGA G 42 G 42 20.161 0 0.050 0.050 23.641 0.000 0.000 - LGA R 43 R 43 20.857 0 0.419 0.475 26.086 0.000 0.000 26.086 LGA S 44 S 44 22.954 0 0.682 0.815 25.615 0.000 0.000 23.335 LGA K 45 K 45 25.494 0 0.687 0.788 30.018 0.000 0.000 27.188 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 7.478 7.707 8.670 21.715 19.484 14.390 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 25 2.67 50.000 47.737 0.903 LGA_LOCAL RMSD: 2.668 Number of atoms: 25 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 9.008 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 7.478 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.336745 * X + -0.745569 * Y + 0.575092 * Z + -13.905561 Y_new = -0.768816 * X + -0.134907 * Y + -0.625078 * Z + 16.507051 Z_new = 0.543623 * X + -0.652631 * Y + -0.527775 * Z + -8.122002 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.983630 -0.574747 -2.250813 [DEG: -113.6536 -32.9306 -128.9621 ] ZXZ: 0.743773 2.126776 2.447068 [DEG: 42.6151 121.8553 140.2067 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS086_2-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS086_2-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 25 2.67 47.737 7.48 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS086_2-D1 PFRMAT TS TARGET T0953s2 MODEL 2 PARENT N/A ATOM 20 N ALA 2 -0.910 42.945 5.707 1.00 7.00 N ATOM 21 CA ALA 2 -0.991 43.110 7.166 1.00 7.00 C ATOM 22 C ALA 2 0.404 42.902 7.761 1.00 7.00 C ATOM 23 O ALA 2 0.652 43.135 8.949 1.00 7.00 O ATOM 24 CB ALA 2 -1.972 42.133 7.773 1.00 7.00 C ATOM 30 N VAL 3 1.298 42.435 6.895 1.00 7.00 N ATOM 31 CA VAL 3 2.694 42.158 7.167 1.00 7.00 C ATOM 32 C VAL 3 3.635 42.788 6.147 1.00 7.00 C ATOM 33 O VAL 3 3.261 43.119 5.008 1.00 7.00 O ATOM 34 CB VAL 3 2.981 40.652 7.200 1.00 7.00 C ATOM 35 CG1 VAL 3 2.212 40.026 8.257 1.00 7.00 C ATOM 36 CG2 VAL 3 2.629 40.007 5.853 1.00 7.00 C ATOM 46 N GLN 4 4.902 42.838 6.547 1.00 7.00 N ATOM 47 CA GLN 4 6.036 43.316 5.760 1.00 7.00 C ATOM 48 C GLN 4 6.322 42.512 4.490 1.00 7.00 C ATOM 49 O GLN 4 7.051 42.972 3.613 1.00 7.00 O ATOM 50 CB GLN 4 7.311 43.293 6.599 1.00 7.00 C ATOM 51 CG GLN 4 7.335 44.204 7.815 1.00 7.00 C ATOM 52 CD GLN 4 6.777 43.535 9.066 1.00 7.00 C ATOM 53 OE1 GLN 4 5.883 42.677 8.985 1.00 7.00 O ATOM 54 NE2 GLN 4 7.297 43.918 10.222 1.00 7.00 N ATOM 63 N GLY 5 5.833 41.285 4.430 1.00 7.00 N ATOM 64 CA GLY 5 6.110 40.445 3.280 1.00 7.00 C ATOM 65 C GLY 5 5.857 38.956 3.528 1.00 7.00 C ATOM 66 O GLY 5 5.672 38.522 4.676 1.00 7.00 O ATOM 70 N PRO 6 6.015 38.132 2.471 1.00 7.00 N ATOM 71 CA PRO 6 5.822 36.693 2.439 1.00 7.00 C ATOM 72 C PRO 6 6.756 35.978 3.391 1.00 7.00 C ATOM 73 O PRO 6 6.485 34.857 3.799 1.00 7.00 O ATOM 74 CB PRO 6 6.124 36.335 0.976 1.00 7.00 C ATOM 75 CG PRO 6 6.998 37.449 0.467 1.00 7.00 C ATOM 76 CD PRO 6 6.518 38.685 1.182 1.00 7.00 C ATOM 84 N TRP 7 7.858 36.632 3.753 1.00 7.00 N ATOM 85 CA TRP 7 8.833 36.071 4.665 1.00 7.00 C ATOM 86 C TRP 7 8.322 36.043 6.102 1.00 7.00 C ATOM 87 O TRP 7 8.793 35.242 6.916 1.00 7.00 O ATOM 88 CB TRP 7 10.134 36.862 4.560 1.00 7.00 C ATOM 89 CG TRP 7 10.014 38.321 4.905 1.00 7.00 C ATOM 90 CD1 TRP 7 9.779 39.346 4.032 1.00 7.00 C ATOM 91 CD2 TRP 7 10.160 38.932 6.205 1.00 7.00 C ATOM 92 NE1 TRP 7 9.766 40.539 4.699 1.00 7.00 N ATOM 93 CE2 TRP 7 10.001 40.308 6.029 1.00 7.00 C ATOM 94 CE3 TRP 7 10.420 38.433 7.489 1.00 7.00 C ATOM 95 CZ2 TRP 7 10.092 41.192 7.084 1.00 7.00 C ATOM 96 CZ3 TRP 7 10.504 39.322 8.544 1.00 7.00 C ATOM 97 CH2 TRP 7 10.344 40.668 8.346 1.00 7.00 C ATOM 108 N VAL 8 7.337 36.892 6.411 1.00 7.00 N ATOM 109 CA VAL 8 6.759 36.952 7.738 1.00 7.00 C ATOM 110 C VAL 8 5.837 35.764 7.831 1.00 7.00 C ATOM 111 O VAL 8 5.842 35.009 8.812 1.00 7.00 O ATOM 112 CB VAL 8 5.957 38.255 7.943 1.00 7.00 C ATOM 113 CG1 VAL 8 5.257 38.241 9.296 1.00 7.00 C ATOM 114 CG2 VAL 8 6.880 39.441 7.811 1.00 7.00 C ATOM 124 N GLY 9 5.019 35.639 6.789 1.00 7.00 N ATOM 125 CA GLY 9 4.052 34.560 6.678 1.00 7.00 C ATOM 126 C GLY 9 4.738 33.197 6.682 1.00 7.00 C ATOM 127 O GLY 9 4.400 32.316 7.482 1.00 7.00 O ATOM 131 N SER 10 5.717 33.035 5.791 1.00 7.00 N ATOM 132 CA SER 10 6.451 31.794 5.637 1.00 7.00 C ATOM 133 C SER 10 7.151 31.383 6.914 1.00 7.00 C ATOM 134 O SER 10 7.068 30.213 7.300 1.00 7.00 O ATOM 135 CB SER 10 7.469 31.927 4.525 1.00 7.00 C ATOM 136 OG SER 10 8.193 30.738 4.357 1.00 7.00 O ATOM 142 N SER 11 7.824 32.323 7.595 1.00 7.00 N ATOM 143 CA SER 11 8.513 31.989 8.829 1.00 7.00 C ATOM 144 C SER 11 7.529 31.454 9.863 1.00 7.00 C ATOM 145 O SER 11 7.785 30.418 10.492 1.00 7.00 O ATOM 146 CB SER 11 9.230 33.207 9.367 1.00 7.00 C ATOM 147 OG SER 11 9.899 32.913 10.561 1.00 7.00 O ATOM 153 N TYR 12 6.386 32.135 10.030 1.00 7.00 N ATOM 154 CA TYR 12 5.394 31.686 10.987 1.00 7.00 C ATOM 155 C TYR 12 4.977 30.260 10.713 1.00 7.00 C ATOM 156 O TYR 12 5.012 29.415 11.614 1.00 7.00 O ATOM 157 CB TYR 12 4.157 32.571 10.940 1.00 7.00 C ATOM 158 CG TYR 12 3.061 32.097 11.831 1.00 7.00 C ATOM 159 CD1 TYR 12 3.072 32.406 13.168 1.00 7.00 C ATOM 160 CD2 TYR 12 2.052 31.319 11.311 1.00 7.00 C ATOM 161 CE1 TYR 12 2.078 31.934 13.976 1.00 7.00 C ATOM 162 CE2 TYR 12 1.064 30.853 12.106 1.00 7.00 C ATOM 163 CZ TYR 12 1.067 31.150 13.447 1.00 7.00 C ATOM 164 OH TYR 12 0.074 30.656 14.269 1.00 7.00 O ATOM 174 N VAL 13 4.593 29.986 9.469 1.00 7.00 N ATOM 175 CA VAL 13 4.107 28.667 9.116 1.00 7.00 C ATOM 176 C VAL 13 5.190 27.611 9.302 1.00 7.00 C ATOM 177 O VAL 13 4.954 26.545 9.878 1.00 7.00 O ATOM 178 CB VAL 13 3.560 28.662 7.672 1.00 7.00 C ATOM 179 CG1 VAL 13 3.224 27.235 7.222 1.00 7.00 C ATOM 180 CG2 VAL 13 2.303 29.541 7.620 1.00 7.00 C ATOM 190 N ALA 14 6.415 27.910 8.877 1.00 7.00 N ATOM 191 CA ALA 14 7.498 26.950 9.005 1.00 7.00 C ATOM 192 C ALA 14 7.708 26.498 10.454 1.00 7.00 C ATOM 193 O ALA 14 8.031 25.329 10.688 1.00 7.00 O ATOM 194 CB ALA 14 8.783 27.564 8.484 1.00 7.00 C ATOM 200 N GLU 15 7.531 27.397 11.428 1.00 7.00 N ATOM 201 CA GLU 15 7.720 27.006 12.823 1.00 7.00 C ATOM 202 C GLU 15 6.446 26.559 13.561 1.00 7.00 C ATOM 203 O GLU 15 6.529 25.738 14.478 1.00 7.00 O ATOM 204 CB GLU 15 8.380 28.133 13.622 1.00 7.00 C ATOM 205 CG GLU 15 9.809 28.466 13.198 1.00 7.00 C ATOM 206 CD GLU 15 10.463 29.514 14.084 1.00 7.00 C ATOM 207 OE1 GLU 15 9.796 30.030 14.953 1.00 7.00 O ATOM 208 OE2 GLU 15 11.633 29.773 13.906 1.00 7.00 O ATOM 215 N THR 16 5.275 27.086 13.184 1.00 7.00 N ATOM 216 CA THR 16 4.041 26.798 13.922 1.00 7.00 C ATOM 217 C THR 16 2.968 25.972 13.193 1.00 7.00 C ATOM 218 O THR 16 2.020 25.506 13.837 1.00 7.00 O ATOM 219 CB THR 16 3.369 28.104 14.348 1.00 7.00 C ATOM 220 OG1 THR 16 3.017 28.829 13.193 1.00 7.00 O ATOM 221 CG2 THR 16 4.278 28.960 15.199 1.00 7.00 C ATOM 229 N GLY 17 3.086 25.784 11.879 1.00 7.00 N ATOM 230 CA GLY 17 2.076 25.079 11.102 1.00 7.00 C ATOM 231 C GLY 17 1.199 26.029 10.293 1.00 7.00 C ATOM 232 O GLY 17 1.142 27.240 10.533 1.00 7.00 O ATOM 236 N GLN 18 0.467 25.480 9.327 1.00 7.00 N ATOM 237 CA GLN 18 -0.355 26.335 8.474 1.00 7.00 C ATOM 238 C GLN 18 -1.661 26.675 9.168 1.00 7.00 C ATOM 239 O GLN 18 -2.728 26.152 8.840 1.00 7.00 O ATOM 240 CB GLN 18 -0.598 25.668 7.115 1.00 7.00 C ATOM 241 CG GLN 18 -1.423 26.496 6.137 1.00 7.00 C ATOM 242 CD GLN 18 -0.744 27.775 5.704 1.00 7.00 C ATOM 243 OE1 GLN 18 0.364 27.762 5.165 1.00 7.00 O ATOM 244 NE2 GLN 18 -1.419 28.892 5.931 1.00 7.00 N ATOM 253 N ASN 19 -1.542 27.575 10.126 1.00 7.00 N ATOM 254 CA ASN 19 -2.647 27.980 10.961 1.00 7.00 C ATOM 255 C ASN 19 -3.420 29.117 10.335 1.00 7.00 C ATOM 256 O ASN 19 -2.884 29.909 9.564 1.00 7.00 O ATOM 257 CB ASN 19 -2.161 28.383 12.333 1.00 7.00 C ATOM 258 CG ASN 19 -1.516 27.255 13.061 1.00 7.00 C ATOM 259 OD1 ASN 19 -1.918 26.091 12.926 1.00 7.00 O ATOM 260 ND2 ASN 19 -0.523 27.572 13.843 1.00 7.00 N ATOM 267 N TRP 20 -4.671 29.180 10.737 1.00 7.00 N ATOM 268 CA TRP 20 -5.678 30.168 10.392 1.00 7.00 C ATOM 269 C TRP 20 -5.469 31.537 11.021 1.00 7.00 C ATOM 270 O TRP 20 -5.004 31.657 12.159 1.00 7.00 O ATOM 271 CB TRP 20 -7.008 29.580 10.743 1.00 7.00 C ATOM 272 CG TRP 20 -8.177 30.420 10.544 1.00 7.00 C ATOM 273 CD1 TRP 20 -8.896 30.962 11.528 1.00 7.00 C ATOM 274 CD2 TRP 20 -8.811 30.825 9.318 1.00 7.00 C ATOM 275 NE1 TRP 20 -9.930 31.679 11.015 1.00 7.00 N ATOM 276 CE2 TRP 20 -9.897 31.603 9.673 1.00 7.00 C ATOM 277 CE3 TRP 20 -8.556 30.586 7.973 1.00 7.00 C ATOM 278 CZ2 TRP 20 -10.731 32.145 8.748 1.00 7.00 C ATOM 279 CZ3 TRP 20 -9.406 31.131 7.039 1.00 7.00 C ATOM 280 CH2 TRP 20 -10.462 31.890 7.434 1.00 7.00 C ATOM 291 N ALA 21 -5.853 32.573 10.281 1.00 7.00 N ATOM 292 CA ALA 21 -5.631 33.963 10.659 1.00 7.00 C ATOM 293 C ALA 21 -6.147 34.360 12.030 1.00 7.00 C ATOM 294 O ALA 21 -5.469 35.093 12.737 1.00 7.00 O ATOM 295 CB ALA 21 -6.290 34.871 9.644 1.00 7.00 C ATOM 301 N SER 22 -7.276 33.832 12.489 1.00 7.00 N ATOM 302 CA SER 22 -7.781 34.255 13.802 1.00 7.00 C ATOM 303 C SER 22 -6.855 33.825 14.944 1.00 7.00 C ATOM 304 O SER 22 -7.010 34.275 16.083 1.00 7.00 O ATOM 305 CB SER 22 -9.174 33.722 14.074 1.00 7.00 C ATOM 306 OG SER 22 -9.169 32.344 14.302 1.00 7.00 O ATOM 312 N LEU 23 -5.932 32.905 14.662 1.00 7.00 N ATOM 313 CA LEU 23 -4.986 32.422 15.645 1.00 7.00 C ATOM 314 C LEU 23 -3.610 33.034 15.365 1.00 7.00 C ATOM 315 O LEU 23 -2.941 33.577 16.259 1.00 7.00 O ATOM 316 CB LEU 23 -4.890 30.898 15.502 1.00 7.00 C ATOM 317 CG LEU 23 -6.212 30.103 15.683 1.00 7.00 C ATOM 318 CD1 LEU 23 -5.939 28.631 15.388 1.00 7.00 C ATOM 319 CD2 LEU 23 -6.770 30.292 17.092 1.00 7.00 C ATOM 331 N ALA 24 -3.205 32.951 14.090 1.00 7.00 N ATOM 332 CA ALA 24 -1.905 33.408 13.609 1.00 7.00 C ATOM 333 C ALA 24 -1.715 34.903 13.850 1.00 7.00 C ATOM 334 O ALA 24 -0.603 35.363 14.145 1.00 7.00 O ATOM 335 CB ALA 24 -1.766 33.046 12.142 1.00 7.00 C ATOM 341 N ALA 25 -2.816 35.657 13.732 1.00 7.00 N ATOM 342 CA ALA 25 -2.854 37.090 13.945 1.00 7.00 C ATOM 343 C ALA 25 -2.440 37.462 15.349 1.00 7.00 C ATOM 344 O ALA 25 -1.799 38.496 15.567 1.00 7.00 O ATOM 345 CB ALA 25 -4.268 37.607 13.691 1.00 7.00 C ATOM 351 N ASN 26 -2.765 36.639 16.337 1.00 7.00 N ATOM 352 CA ASN 26 -2.397 37.040 17.663 1.00 7.00 C ATOM 353 C ASN 26 -0.941 36.712 17.895 1.00 7.00 C ATOM 354 O ASN 26 -0.193 37.531 18.432 1.00 7.00 O ATOM 355 CB ASN 26 -3.315 36.388 18.664 1.00 7.00 C ATOM 356 CG ASN 26 -4.691 36.995 18.596 1.00 7.00 C ATOM 357 OD1 ASN 26 -4.853 38.170 18.230 1.00 7.00 O ATOM 358 ND2 ASN 26 -5.685 36.220 18.927 1.00 7.00 N ATOM 365 N GLU 27 -0.490 35.580 17.359 1.00 7.00 N ATOM 366 CA GLU 27 0.877 35.148 17.621 1.00 7.00 C ATOM 367 C GLU 27 1.919 36.143 17.112 1.00 7.00 C ATOM 368 O GLU 27 2.927 36.383 17.779 1.00 7.00 O ATOM 369 CB GLU 27 1.119 33.797 16.956 1.00 7.00 C ATOM 370 CG GLU 27 0.334 32.642 17.564 1.00 7.00 C ATOM 371 CD GLU 27 0.716 32.333 18.968 1.00 7.00 C ATOM 372 OE1 GLU 27 1.858 32.027 19.206 1.00 7.00 O ATOM 373 OE2 GLU 27 -0.133 32.447 19.814 1.00 7.00 O ATOM 380 N LEU 28 1.681 36.749 15.946 1.00 7.00 N ATOM 381 CA LEU 28 2.636 37.738 15.444 1.00 7.00 C ATOM 382 C LEU 28 2.190 39.197 15.555 1.00 7.00 C ATOM 383 O LEU 28 2.825 40.059 14.949 1.00 7.00 O ATOM 384 CB LEU 28 2.992 37.528 13.970 1.00 7.00 C ATOM 385 CG LEU 28 3.649 36.242 13.513 1.00 7.00 C ATOM 386 CD1 LEU 28 3.904 36.424 12.035 1.00 7.00 C ATOM 387 CD2 LEU 28 4.927 35.952 14.273 1.00 7.00 C ATOM 399 N ARG 29 1.104 39.497 16.271 1.00 7.00 N ATOM 400 CA ARG 29 0.578 40.873 16.309 1.00 7.00 C ATOM 401 C ARG 29 0.296 41.414 14.886 1.00 7.00 C ATOM 402 O ARG 29 0.736 42.507 14.519 1.00 7.00 O ATOM 403 CB ARG 29 1.546 41.823 17.015 1.00 7.00 C ATOM 404 CG ARG 29 1.848 41.482 18.459 1.00 7.00 C ATOM 405 CD ARG 29 2.738 42.490 19.080 1.00 7.00 C ATOM 406 NE ARG 29 3.042 42.162 20.470 1.00 7.00 N ATOM 407 CZ ARG 29 3.879 42.863 21.271 1.00 7.00 C ATOM 408 NH1 ARG 29 4.499 43.935 20.816 1.00 7.00 N ATOM 409 NH2 ARG 29 4.077 42.465 22.518 1.00 7.00 N ATOM 423 N VAL 30 -0.437 40.632 14.090 1.00 7.00 N ATOM 424 CA VAL 30 -0.760 40.960 12.697 1.00 7.00 C ATOM 425 C VAL 30 -2.238 41.132 12.420 1.00 7.00 C ATOM 426 O VAL 30 -3.031 40.233 12.649 1.00 7.00 O ATOM 427 CB VAL 30 -0.184 39.874 11.764 1.00 7.00 C ATOM 428 CG1 VAL 30 -0.596 40.103 10.331 1.00 7.00 C ATOM 429 CG2 VAL 30 1.326 39.942 11.843 1.00 7.00 C ATOM 439 N THR 31 -2.585 42.274 11.860 1.00 7.00 N ATOM 440 CA THR 31 -3.960 42.625 11.535 1.00 7.00 C ATOM 441 C THR 31 -4.590 41.557 10.632 1.00 7.00 C ATOM 442 O THR 31 -3.983 41.122 9.664 1.00 7.00 O ATOM 443 CB THR 31 -3.990 44.018 10.854 1.00 7.00 C ATOM 444 OG1 THR 31 -3.377 44.983 11.723 1.00 7.00 O ATOM 445 CG2 THR 31 -5.419 44.464 10.603 1.00 7.00 C ATOM 453 N GLU 32 -5.828 41.151 10.929 1.00 7.00 N ATOM 454 CA GLU 32 -6.540 40.120 10.160 1.00 7.00 C ATOM 455 C GLU 32 -6.727 40.456 8.667 1.00 7.00 C ATOM 456 O GLU 32 -7.017 39.580 7.843 1.00 7.00 O ATOM 457 CB GLU 32 -7.885 39.840 10.806 1.00 7.00 C ATOM 458 CG GLU 32 -7.801 39.182 12.189 1.00 7.00 C ATOM 459 CD GLU 32 -7.582 40.156 13.336 1.00 7.00 C ATOM 460 OE1 GLU 32 -7.367 41.335 13.084 1.00 7.00 O ATOM 461 OE2 GLU 32 -7.633 39.715 14.462 1.00 7.00 O ATOM 468 N ARG 33 -6.654 41.722 8.322 1.00 7.00 N ATOM 469 CA ARG 33 -6.764 42.088 6.933 1.00 7.00 C ATOM 470 C ARG 33 -5.716 43.135 6.579 1.00 7.00 C ATOM 471 O ARG 33 -5.578 44.132 7.289 1.00 7.00 O ATOM 472 CB ARG 33 -8.152 42.632 6.605 1.00 7.00 C ATOM 473 CG ARG 33 -8.561 43.940 7.284 1.00 7.00 C ATOM 474 CD ARG 33 -9.933 44.321 6.884 1.00 7.00 C ATOM 475 NE ARG 33 -10.359 45.583 7.466 1.00 7.00 N ATOM 476 CZ ARG 33 -11.580 46.133 7.293 1.00 7.00 C ATOM 477 NH1 ARG 33 -12.482 45.521 6.555 1.00 7.00 N ATOM 478 NH2 ARG 33 -11.867 47.291 7.866 1.00 7.00 N ATOM 492 N PRO 34 -4.992 42.950 5.466 1.00 7.00 N ATOM 493 CA PRO 34 -4.849 41.795 4.566 1.00 7.00 C ATOM 494 C PRO 34 -3.931 40.678 5.140 1.00 7.00 C ATOM 495 O PRO 34 -2.699 40.744 5.022 1.00 7.00 O ATOM 496 CB PRO 34 -4.206 42.430 3.320 1.00 7.00 C ATOM 497 CG PRO 34 -4.446 43.914 3.465 1.00 7.00 C ATOM 498 CD PRO 34 -4.372 44.154 4.953 1.00 7.00 C ATOM 506 N PHE 35 -4.484 39.670 5.819 1.00 7.00 N ATOM 507 CA PHE 35 -3.611 38.679 6.430 1.00 7.00 C ATOM 508 C PHE 35 -2.885 37.923 5.310 1.00 7.00 C ATOM 509 O PHE 35 -3.507 37.607 4.283 1.00 7.00 O ATOM 510 CB PHE 35 -4.423 37.711 7.249 1.00 7.00 C ATOM 511 CG PHE 35 -3.680 37.075 8.247 1.00 7.00 C ATOM 512 CD1 PHE 35 -3.448 37.800 9.356 1.00 7.00 C ATOM 513 CD2 PHE 35 -3.221 35.832 8.160 1.00 7.00 C ATOM 514 CE1 PHE 35 -2.785 37.318 10.360 1.00 7.00 C ATOM 515 CE2 PHE 35 -2.534 35.311 9.194 1.00 7.00 C ATOM 516 CZ PHE 35 -2.322 36.076 10.305 1.00 7.00 C ATOM 526 N TRP 36 -1.594 37.586 5.529 1.00 7.00 N ATOM 527 CA TRP 36 -0.728 36.912 4.536 1.00 7.00 C ATOM 528 C TRP 36 -1.274 35.639 3.902 1.00 7.00 C ATOM 529 O TRP 36 -0.929 35.290 2.765 1.00 7.00 O ATOM 530 CB TRP 36 0.618 36.515 5.159 1.00 7.00 C ATOM 531 CG TRP 36 0.570 35.431 6.251 1.00 7.00 C ATOM 532 CD1 TRP 36 0.517 34.080 6.059 1.00 7.00 C ATOM 533 CD2 TRP 36 0.665 35.605 7.670 1.00 7.00 C ATOM 534 NE1 TRP 36 0.560 33.427 7.250 1.00 7.00 N ATOM 535 CE2 TRP 36 0.663 34.330 8.241 1.00 7.00 C ATOM 536 CE3 TRP 36 0.769 36.695 8.484 1.00 7.00 C ATOM 537 CZ2 TRP 36 0.762 34.139 9.578 1.00 7.00 C ATOM 538 CZ3 TRP 36 0.875 36.496 9.841 1.00 7.00 C ATOM 539 CH2 TRP 36 0.876 35.249 10.378 1.00 7.00 C ATOM 550 N ILE 37 -2.179 34.974 4.581 1.00 7.00 N ATOM 551 CA ILE 37 -2.737 33.727 4.090 1.00 7.00 C ATOM 552 C ILE 37 -3.411 33.918 2.738 1.00 7.00 C ATOM 553 O ILE 37 -3.358 33.032 1.874 1.00 7.00 O ATOM 554 CB ILE 37 -3.720 33.133 5.115 1.00 7.00 C ATOM 555 CG1 ILE 37 -2.913 32.661 6.359 1.00 7.00 C ATOM 556 CG2 ILE 37 -4.535 31.996 4.498 1.00 7.00 C ATOM 557 CD1 ILE 37 -3.734 32.315 7.579 1.00 7.00 C ATOM 569 N SER 38 -4.117 35.031 2.592 1.00 7.00 N ATOM 570 CA SER 38 -4.876 35.303 1.394 1.00 7.00 C ATOM 571 C SER 38 -4.069 35.773 0.189 1.00 7.00 C ATOM 572 O SER 38 -4.586 35.695 -0.931 1.00 7.00 O ATOM 573 CB SER 38 -5.904 36.371 1.704 1.00 7.00 C ATOM 574 OG SER 38 -5.282 37.620 1.919 1.00 7.00 O ATOM 580 N SER 39 -2.810 36.220 0.379 1.00 7.00 N ATOM 581 CA SER 39 -2.046 36.811 -0.729 1.00 7.00 C ATOM 582 C SER 39 -0.597 36.338 -0.895 1.00 7.00 C ATOM 583 O SER 39 -0.002 36.504 -1.972 1.00 7.00 O ATOM 584 CB SER 39 -2.014 38.299 -0.541 1.00 7.00 C ATOM 585 OG SER 39 -1.321 38.603 0.627 1.00 7.00 O ATOM 591 N PHE 40 0.002 35.772 0.147 1.00 7.00 N ATOM 592 CA PHE 40 1.374 35.319 0.034 1.00 7.00 C ATOM 593 C PHE 40 1.505 33.823 0.218 1.00 7.00 C ATOM 594 O PHE 40 2.079 33.109 -0.613 1.00 7.00 O ATOM 595 CB PHE 40 2.276 35.972 1.085 1.00 7.00 C ATOM 596 CG PHE 40 2.502 37.471 0.982 1.00 7.00 C ATOM 597 CD1 PHE 40 2.804 38.077 -0.231 1.00 7.00 C ATOM 598 CD2 PHE 40 2.479 38.268 2.118 1.00 7.00 C ATOM 599 CE1 PHE 40 3.052 39.424 -0.304 1.00 7.00 C ATOM 600 CE2 PHE 40 2.739 39.613 2.036 1.00 7.00 C ATOM 601 CZ PHE 40 3.022 40.189 0.827 1.00 7.00 C ATOM 611 N ILE 41 0.963 33.313 1.314 1.00 7.00 N ATOM 612 CA ILE 41 1.246 31.917 1.603 1.00 7.00 C ATOM 613 C ILE 41 0.150 31.026 1.091 1.00 7.00 C ATOM 614 O ILE 41 -0.715 30.574 1.837 1.00 7.00 O ATOM 615 CB ILE 41 1.485 31.711 3.104 1.00 7.00 C ATOM 616 CG1 ILE 41 2.539 32.759 3.602 1.00 7.00 C ATOM 617 CG2 ILE 41 1.957 30.275 3.405 1.00 7.00 C ATOM 618 CD1 ILE 41 3.890 32.763 2.906 1.00 7.00 C ATOM 630 N GLY 42 0.256 30.744 -0.196 1.00 7.00 N ATOM 631 CA GLY 42 -0.697 29.930 -0.937 1.00 7.00 C ATOM 632 C GLY 42 -1.768 30.755 -1.652 1.00 7.00 C ATOM 633 O GLY 42 -2.479 30.227 -2.506 1.00 7.00 O ATOM 637 N ARG 43 -1.867 32.048 -1.331 1.00 7.00 N ATOM 638 CA ARG 43 -2.847 32.925 -1.966 1.00 7.00 C ATOM 639 C ARG 43 -4.253 32.372 -1.907 1.00 7.00 C ATOM 640 O ARG 43 -4.873 32.148 -2.950 1.00 7.00 O ATOM 641 CB ARG 43 -2.478 33.224 -3.414 1.00 7.00 C ATOM 642 CG ARG 43 -1.210 33.976 -3.544 1.00 7.00 C ATOM 643 CD ARG 43 -0.835 34.314 -4.926 1.00 7.00 C ATOM 644 NE ARG 43 -1.780 35.241 -5.578 1.00 7.00 N ATOM 645 CZ ARG 43 -1.910 36.578 -5.386 1.00 7.00 C ATOM 646 NH1 ARG 43 -1.209 37.270 -4.491 1.00 7.00 N ATOM 647 NH2 ARG 43 -2.796 37.195 -6.148 1.00 7.00 N ATOM 661 N SER 44 -4.790 32.180 -0.699 1.00 7.00 N ATOM 662 CA SER 44 -6.094 31.535 -0.589 1.00 7.00 C ATOM 663 C SER 44 -7.205 32.287 -1.318 1.00 7.00 C ATOM 664 O SER 44 -8.195 31.667 -1.700 1.00 7.00 O ATOM 665 CB SER 44 -6.519 31.321 0.854 1.00 7.00 C ATOM 666 OG SER 44 -6.850 32.519 1.473 1.00 7.00 O ATOM 672 N LYS 45 -7.046 33.590 -1.620 1.00 7.00 N ATOM 673 CA LYS 45 -8.092 34.310 -2.343 1.00 7.00 C ATOM 674 C LYS 45 -8.341 33.728 -3.751 1.00 7.00 C ATOM 675 O LYS 45 -9.306 34.118 -4.409 1.00 7.00 O ATOM 676 CB LYS 45 -7.766 35.803 -2.452 1.00 7.00 C ATOM 677 CG LYS 45 -6.612 36.159 -3.407 1.00 7.00 C ATOM 678 CD LYS 45 -6.157 37.622 -3.232 1.00 7.00 C ATOM 679 CE LYS 45 -7.198 38.629 -3.754 1.00 7.00 C ATOM 680 NZ LYS 45 -6.681 40.032 -3.711 1.00 7.00 N TER 3519 END