####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS085_5-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS085_5-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 35 5 - 39 4.98 8.23 LONGEST_CONTINUOUS_SEGMENT: 35 6 - 40 4.87 8.27 LCS_AVERAGE: 74.38 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 17 14 - 30 1.94 9.66 LCS_AVERAGE: 26.60 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 20 - 30 0.77 9.73 LCS_AVERAGE: 13.84 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 5 8 17 4 4 6 8 9 10 11 12 16 20 24 27 29 32 34 37 37 37 38 39 LCS_GDT V 3 V 3 5 8 17 4 4 6 8 9 10 11 12 13 15 20 27 29 32 34 37 37 37 38 39 LCS_GDT Q 4 Q 4 5 8 34 4 4 6 8 9 10 11 12 13 13 14 18 23 32 34 37 37 37 38 39 LCS_GDT G 5 G 5 5 8 35 4 4 6 8 9 10 11 12 13 13 14 16 20 26 28 37 37 37 38 39 LCS_GDT P 6 P 6 5 8 35 2 3 6 8 9 10 11 12 16 21 26 27 29 32 34 37 37 37 38 39 LCS_GDT W 7 W 7 4 8 35 2 3 5 8 12 16 20 22 23 25 27 29 30 32 34 37 37 37 38 39 LCS_GDT V 8 V 8 4 8 35 0 3 4 8 9 10 13 20 23 25 27 29 30 32 34 37 37 37 38 39 LCS_GDT G 9 G 9 4 8 35 0 3 4 11 12 15 19 22 23 25 28 29 30 32 34 37 37 37 38 39 LCS_GDT S 10 S 10 3 8 35 1 6 9 10 13 16 18 21 23 25 28 28 30 32 32 32 32 35 38 39 LCS_GDT S 11 S 11 5 8 35 3 4 5 10 13 16 18 21 23 25 28 28 30 32 32 32 33 37 38 39 LCS_GDT Y 12 Y 12 6 8 35 4 6 10 11 13 16 18 22 23 25 28 29 30 32 34 37 37 37 38 39 LCS_GDT V 13 V 13 6 8 35 5 6 6 7 10 14 18 21 23 25 28 29 30 32 33 37 37 37 38 39 LCS_GDT A 14 A 14 6 17 35 5 6 6 13 14 16 18 21 23 25 28 29 30 32 34 37 37 37 38 39 LCS_GDT E 15 E 15 6 17 35 5 6 11 13 16 17 20 22 23 25 28 29 30 32 34 37 37 37 38 39 LCS_GDT T 16 T 16 6 17 35 5 6 9 13 16 17 20 22 23 25 28 29 30 32 34 37 37 37 38 39 LCS_GDT G 17 G 17 6 17 35 5 6 6 8 11 13 18 21 23 25 28 29 30 32 34 37 37 37 38 39 LCS_GDT Q 18 Q 18 4 17 35 3 3 4 6 12 16 19 22 23 25 28 29 30 32 34 37 37 37 38 39 LCS_GDT N 19 N 19 6 17 35 2 5 9 14 16 17 20 22 23 25 28 29 30 32 34 37 37 37 38 39 LCS_GDT W 20 W 20 11 17 35 4 9 11 14 16 17 20 22 23 25 28 29 30 32 34 37 37 37 38 39 LCS_GDT A 21 A 21 11 17 35 8 9 11 14 16 17 20 22 23 25 28 29 30 32 34 37 37 37 38 39 LCS_GDT S 22 S 22 11 17 35 8 9 11 14 16 17 20 22 23 25 28 29 30 32 34 37 37 37 38 39 LCS_GDT L 23 L 23 11 17 35 6 9 11 14 16 17 20 22 23 25 28 29 30 32 34 37 37 37 38 39 LCS_GDT A 24 A 24 11 17 35 8 9 11 14 16 17 20 22 23 25 28 29 30 32 34 37 37 37 38 39 LCS_GDT A 25 A 25 11 17 35 8 9 11 14 16 17 20 22 23 25 28 29 30 32 34 37 37 37 38 39 LCS_GDT N 26 N 26 11 17 35 8 9 11 14 16 17 20 22 23 25 28 29 30 32 34 37 37 37 38 39 LCS_GDT E 27 E 27 11 17 35 8 9 11 14 16 17 20 22 23 25 28 29 30 32 34 37 37 37 38 39 LCS_GDT L 28 L 28 11 17 35 8 9 11 14 16 17 20 22 23 25 28 29 30 32 34 37 37 37 38 39 LCS_GDT R 29 R 29 11 17 35 8 9 11 14 16 17 20 22 23 25 28 29 30 32 34 37 37 37 38 39 LCS_GDT V 30 V 30 11 17 35 3 9 11 14 16 17 20 22 23 25 28 29 30 32 34 37 37 37 38 39 LCS_GDT T 31 T 31 6 15 35 3 5 10 14 16 17 20 22 23 25 28 29 30 32 34 37 37 37 38 39 LCS_GDT E 32 E 32 4 15 35 3 4 4 6 10 13 20 22 23 25 28 29 30 32 34 37 37 37 38 39 LCS_GDT R 33 R 33 4 15 35 2 4 10 14 16 17 20 22 23 25 28 29 30 32 34 37 37 37 38 39 LCS_GDT P 34 P 34 4 14 35 2 4 5 7 8 12 16 18 22 25 27 29 30 32 33 37 37 37 38 39 LCS_GDT F 35 F 35 4 14 35 3 4 8 14 15 16 19 22 23 25 28 29 30 32 34 37 37 37 38 39 LCS_GDT W 36 W 36 3 7 35 3 3 4 12 16 17 20 22 23 25 28 29 30 32 34 37 37 37 38 39 LCS_GDT I 37 I 37 3 7 35 3 3 5 10 15 17 20 22 23 25 28 29 30 32 34 37 37 37 38 39 LCS_GDT S 38 S 38 3 7 35 3 3 5 7 10 15 18 22 23 25 26 28 30 32 34 37 37 37 38 39 LCS_GDT S 39 S 39 3 6 35 1 3 3 4 6 8 9 11 14 18 22 25 28 32 34 37 37 37 38 39 LCS_GDT F 40 F 40 3 5 35 1 3 3 4 6 8 9 11 14 17 22 27 28 32 34 37 37 37 38 39 LCS_GDT I 41 I 41 3 5 30 1 3 3 5 5 8 9 11 14 16 21 21 23 25 27 28 32 34 36 37 LCS_GDT G 42 G 42 4 5 28 3 4 4 6 8 8 9 11 12 14 15 17 20 22 22 23 25 29 29 30 LCS_GDT R 43 R 43 4 5 20 3 4 4 6 8 8 9 11 12 14 14 15 16 17 19 21 23 23 27 30 LCS_GDT S 44 S 44 4 5 17 3 4 4 5 5 6 8 11 12 14 14 15 15 16 18 20 20 23 24 25 LCS_GDT K 45 K 45 4 5 17 1 4 4 6 8 8 9 11 12 14 14 15 15 16 18 20 20 23 24 26 LCS_AVERAGE LCS_A: 38.27 ( 13.84 26.60 74.38 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 8 9 11 14 16 17 20 22 23 25 28 29 30 32 34 37 37 37 38 39 GDT PERCENT_AT 18.18 20.45 25.00 31.82 36.36 38.64 45.45 50.00 52.27 56.82 63.64 65.91 68.18 72.73 77.27 84.09 84.09 84.09 86.36 88.64 GDT RMS_LOCAL 0.35 0.40 0.77 1.41 1.58 1.82 2.27 2.51 2.64 2.94 3.39 3.57 3.70 4.02 4.67 5.00 5.00 5.00 5.27 5.43 GDT RMS_ALL_AT 10.18 10.37 9.73 9.53 8.67 8.54 8.21 8.22 8.14 8.48 9.38 8.58 8.47 8.76 7.95 8.00 8.00 8.00 8.07 8.04 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 27 E 27 # possible swapping detected: F 35 F 35 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 9.164 0 0.110 0.158 11.254 0.000 0.000 - LGA V 3 V 3 8.682 0 0.041 0.128 10.996 0.000 0.000 9.483 LGA Q 4 Q 4 10.369 0 0.066 0.689 11.589 0.000 0.000 10.866 LGA G 5 G 5 11.712 0 0.227 0.227 11.712 0.000 0.000 - LGA P 6 P 6 8.479 0 0.070 0.721 9.631 0.000 0.000 9.181 LGA W 7 W 7 3.708 0 0.383 0.363 5.621 4.545 10.519 4.080 LGA V 8 V 8 4.978 0 0.700 1.490 9.310 3.636 2.078 9.310 LGA G 9 G 9 5.613 0 0.516 0.516 8.327 0.455 0.455 - LGA S 10 S 10 9.454 0 0.717 0.694 11.090 0.000 0.000 10.277 LGA S 11 S 11 8.356 0 0.638 0.595 8.667 0.000 0.000 8.487 LGA Y 12 Y 12 5.924 0 0.113 1.177 17.482 1.364 0.455 17.482 LGA V 13 V 13 7.227 0 0.070 0.081 9.876 0.000 0.000 9.621 LGA A 14 A 14 6.626 0 0.039 0.040 7.077 0.000 0.000 - LGA E 15 E 15 2.064 0 0.032 1.183 3.505 26.364 46.667 1.117 LGA T 16 T 16 2.643 0 0.715 0.637 6.664 16.818 34.545 2.699 LGA G 17 G 17 6.492 0 0.131 0.131 7.101 0.455 0.455 - LGA Q 18 Q 18 3.841 0 0.264 0.902 9.970 25.000 11.111 8.412 LGA N 19 N 19 1.195 0 0.304 1.363 6.472 61.818 36.591 4.818 LGA W 20 W 20 1.280 0 0.139 0.906 5.637 69.545 36.104 5.222 LGA A 21 A 21 1.277 0 0.072 0.078 1.603 65.455 62.545 - LGA S 22 S 22 1.061 0 0.060 0.630 1.673 69.545 65.758 1.673 LGA L 23 L 23 1.528 0 0.081 1.431 6.840 65.909 38.182 4.686 LGA A 24 A 24 1.913 0 0.053 0.057 2.482 50.909 48.364 - LGA A 25 A 25 1.912 0 0.031 0.031 2.360 47.727 48.364 - LGA N 26 N 26 1.321 0 0.029 0.111 2.194 61.818 56.591 2.194 LGA E 27 E 27 1.454 0 0.089 0.288 2.680 49.091 53.333 1.554 LGA L 28 L 28 2.676 0 0.159 0.181 3.575 25.909 23.182 3.225 LGA R 29 R 29 2.772 0 0.054 1.330 10.315 25.000 11.736 10.315 LGA V 30 V 30 2.709 0 0.215 0.238 4.873 49.091 30.649 4.121 LGA T 31 T 31 1.324 0 0.695 0.975 5.848 48.182 35.584 2.419 LGA E 32 E 32 3.704 0 0.670 1.287 10.912 25.909 11.515 10.912 LGA R 33 R 33 2.905 0 0.607 1.048 8.197 16.818 7.107 7.815 LGA P 34 P 34 6.641 0 0.585 0.596 9.111 0.000 0.000 9.111 LGA F 35 F 35 4.101 0 0.607 1.297 7.990 7.727 4.959 7.990 LGA W 36 W 36 1.965 0 0.260 1.142 8.734 35.000 15.325 7.594 LGA I 37 I 37 3.505 0 0.597 1.374 5.630 10.909 6.136 5.630 LGA S 38 S 38 4.967 0 0.651 0.795 8.733 1.818 1.212 6.665 LGA S 39 S 39 9.661 0 0.449 0.408 11.031 0.000 0.000 10.469 LGA F 40 F 40 9.583 0 0.621 1.615 11.821 0.000 0.000 11.821 LGA I 41 I 41 13.906 0 0.120 0.157 17.561 0.000 0.000 15.857 LGA G 42 G 42 16.925 0 0.634 0.634 19.824 0.000 0.000 - LGA R 43 R 43 18.147 0 0.061 1.536 22.637 0.000 0.000 21.527 LGA S 44 S 44 19.901 0 0.051 0.707 22.348 0.000 0.000 22.348 LGA K 45 K 45 22.646 0 0.073 0.798 24.604 0.000 0.000 21.152 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 7.791 7.787 8.441 19.700 15.898 8.675 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 22 2.51 46.591 41.589 0.844 LGA_LOCAL RMSD: 2.506 Number of atoms: 22 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 8.223 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 7.791 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.308840 * X + 0.654594 * Y + 0.690018 * Z + 10.470104 Y_new = -0.510757 * X + 0.726145 * Y + -0.460262 * Z + 29.827332 Z_new = -0.802338 * X + -0.210284 * Y + 0.558601 * Z + 11.276497 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.026949 0.931201 -0.360039 [DEG: -58.8399 53.3539 -20.6287 ] ZXZ: 0.982543 0.978098 -1.827120 [DEG: 56.2956 56.0409 -104.6863 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS085_5-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS085_5-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 22 2.51 41.589 7.79 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS085_5-D1 PFRMAT TS TARGET T0953s2 MODEL 5 PARENT N/A ATOM 21 N ALA 2 12.194 29.346 8.097 1.00 0.00 ATOM 23 CA ALA 2 13.176 29.967 7.291 1.00 0.00 ATOM 25 CB ALA 2 14.287 28.959 7.028 1.00 0.00 ATOM 29 C ALA 2 12.673 30.503 6.033 1.00 0.00 ATOM 30 O ALA 2 11.973 29.805 5.302 1.00 0.00 ATOM 31 N VAL 3 13.017 31.834 5.681 1.00 0.00 ATOM 33 CA VAL 3 12.664 32.176 4.314 1.00 0.00 ATOM 35 CB VAL 3 12.834 33.696 4.093 1.00 0.00 ATOM 37 CG1 VAL 3 12.599 34.053 2.626 1.00 0.00 ATOM 41 CG2 VAL 3 11.833 34.473 4.946 1.00 0.00 ATOM 45 C VAL 3 13.445 31.437 3.332 1.00 0.00 ATOM 46 O VAL 3 14.672 31.425 3.403 1.00 0.00 ATOM 47 N GLN 4 12.769 30.756 2.313 1.00 0.00 ATOM 49 CA GLN 4 13.506 29.697 1.578 1.00 0.00 ATOM 51 CB GLN 4 13.111 28.274 1.980 1.00 0.00 ATOM 54 CG GLN 4 13.604 27.930 3.386 1.00 0.00 ATOM 57 CD GLN 4 13.091 26.564 3.827 1.00 0.00 ATOM 58 OE1 GLN 4 13.315 25.563 3.161 1.00 0.00 ATOM 59 NE2 GLN 4 12.401 26.497 4.945 1.00 0.00 ATOM 62 C GLN 4 13.177 29.929 0.206 1.00 0.00 ATOM 63 O GLN 4 12.020 30.191 -0.114 1.00 0.00 ATOM 64 N GLY 5 14.091 29.860 -0.702 1.00 0.00 ATOM 66 CA GLY 5 13.732 29.663 -2.052 1.00 0.00 ATOM 69 C GLY 5 12.933 30.910 -2.552 1.00 0.00 ATOM 70 O GLY 5 13.363 32.043 -2.346 1.00 0.00 ATOM 71 N PRO 6 11.754 30.539 -3.205 1.00 0.00 ATOM 72 CD PRO 6 12.137 30.152 -5.279 1.00 0.00 ATOM 75 CG PRO 6 10.788 29.505 -5.011 1.00 0.00 ATOM 78 CB PRO 6 9.884 30.602 -4.494 1.00 0.00 ATOM 81 CA PRO 6 10.785 31.509 -3.654 1.00 0.00 ATOM 83 C PRO 6 9.971 32.304 -2.634 1.00 0.00 ATOM 84 O PRO 6 9.497 33.396 -2.940 1.00 0.00 ATOM 85 N TRP 7 9.851 31.681 -1.407 1.00 0.00 ATOM 87 CA TRP 7 8.741 32.057 -0.519 1.00 0.00 ATOM 89 CB TRP 7 7.944 30.883 0.058 1.00 0.00 ATOM 92 CG TRP 7 7.153 30.167 -1.002 1.00 0.00 ATOM 93 CD1 TRP 7 7.588 29.125 -1.754 1.00 0.00 ATOM 95 NE1 TRP 7 6.588 28.734 -2.614 1.00 0.00 ATOM 97 CE2 TRP 7 5.473 29.521 -2.438 1.00 0.00 ATOM 98 CZ2 TRP 7 4.223 29.527 -3.053 1.00 0.00 ATOM 100 CH2 TRP 7 3.287 30.467 -2.644 1.00 0.00 ATOM 102 CZ3 TRP 7 3.599 31.384 -1.636 1.00 0.00 ATOM 104 CE3 TRP 7 4.850 31.377 -1.022 1.00 0.00 ATOM 106 CD2 TRP 7 5.805 30.435 -1.422 1.00 0.00 ATOM 107 C TRP 7 9.490 32.817 0.636 1.00 0.00 ATOM 108 O TRP 7 10.503 32.332 1.137 1.00 0.00 ATOM 109 N VAL 8 8.869 34.021 0.972 1.00 0.00 ATOM 111 CA VAL 8 9.269 35.101 1.908 1.00 0.00 ATOM 113 CB VAL 8 9.586 36.459 1.243 1.00 0.00 ATOM 115 CG1 VAL 8 10.754 36.318 0.269 1.00 0.00 ATOM 119 CG2 VAL 8 8.371 36.969 0.470 1.00 0.00 ATOM 123 C VAL 8 8.087 35.229 2.785 1.00 0.00 ATOM 124 O VAL 8 6.969 34.955 2.356 1.00 0.00 ATOM 125 N GLY 9 8.400 35.649 3.971 1.00 0.00 ATOM 127 CA GLY 9 7.479 35.981 4.981 1.00 0.00 ATOM 130 C GLY 9 7.866 37.117 5.804 1.00 0.00 ATOM 131 O GLY 9 9.054 37.390 5.958 1.00 0.00 ATOM 132 N SER 10 6.799 37.743 6.316 1.00 0.00 ATOM 134 CA SER 10 6.909 39.056 6.792 1.00 0.00 ATOM 136 CB SER 10 6.385 40.136 5.843 1.00 0.00 ATOM 139 OG SER 10 4.982 39.997 5.674 1.00 0.00 ATOM 141 C SER 10 6.097 39.008 7.970 1.00 0.00 ATOM 142 O SER 10 5.162 38.214 8.041 1.00 0.00 ATOM 143 N SER 11 6.325 39.852 9.067 1.00 0.00 ATOM 145 CA SER 11 5.460 39.899 10.182 1.00 0.00 ATOM 147 CB SER 11 3.970 39.923 9.839 1.00 0.00 ATOM 150 OG SER 11 3.196 39.946 11.029 1.00 0.00 ATOM 152 C SER 11 5.819 38.546 10.948 1.00 0.00 ATOM 153 O SER 11 6.239 37.576 10.321 1.00 0.00 ATOM 154 N TYR 12 5.621 38.573 12.254 1.00 0.00 ATOM 156 CA TYR 12 5.794 37.326 13.080 1.00 0.00 ATOM 158 CB TYR 12 5.667 37.607 14.581 1.00 0.00 ATOM 161 CG TYR 12 6.828 38.423 15.112 1.00 0.00 ATOM 162 CD1 TYR 12 6.837 39.812 14.977 1.00 0.00 ATOM 164 CE1 TYR 12 7.908 40.563 15.466 1.00 0.00 ATOM 166 CZ TYR 12 8.972 39.924 16.093 1.00 0.00 ATOM 167 OH TYR 12 10.026 40.661 16.575 1.00 0.00 ATOM 169 CE2 TYR 12 8.972 38.540 16.233 1.00 0.00 ATOM 171 CD2 TYR 12 7.901 37.792 15.743 1.00 0.00 ATOM 173 C TYR 12 4.686 36.288 12.630 1.00 0.00 ATOM 174 O TYR 12 4.748 35.119 13.004 1.00 0.00 ATOM 175 N VAL 13 3.798 36.820 11.873 1.00 0.00 ATOM 177 CA VAL 13 2.785 36.064 11.230 1.00 0.00 ATOM 179 CB VAL 13 1.820 36.931 10.391 1.00 0.00 ATOM 181 CG1 VAL 13 0.881 36.047 9.571 1.00 0.00 ATOM 185 CG2 VAL 13 0.976 37.820 11.303 1.00 0.00 ATOM 189 C VAL 13 3.544 34.997 10.277 1.00 0.00 ATOM 190 O VAL 13 3.069 33.876 10.109 1.00 0.00 ATOM 191 N ALA 14 4.635 35.368 9.730 1.00 0.00 ATOM 193 CA ALA 14 5.537 34.476 8.887 1.00 0.00 ATOM 195 CB ALA 14 6.741 35.250 8.364 1.00 0.00 ATOM 199 C ALA 14 6.000 33.281 9.738 1.00 0.00 ATOM 200 O ALA 14 5.941 32.140 9.283 1.00 0.00 ATOM 201 N GLU 15 6.459 33.541 10.988 1.00 0.00 ATOM 203 CA GLU 15 6.853 32.457 11.933 1.00 0.00 ATOM 205 CB GLU 15 7.326 33.047 13.264 1.00 0.00 ATOM 208 CG GLU 15 8.676 33.751 13.116 1.00 0.00 ATOM 211 CD GLU 15 9.132 34.345 14.445 1.00 0.00 ATOM 212 OE1 GLU 15 10.231 34.901 14.486 1.00 0.00 ATOM 213 OE2 GLU 15 8.372 34.237 15.414 1.00 0.00 ATOM 214 C GLU 15 5.664 31.486 12.172 1.00 0.00 ATOM 215 O GLU 15 5.853 30.273 12.189 1.00 0.00 ATOM 216 N THR 16 4.493 32.000 12.340 1.00 0.00 ATOM 218 CA THR 16 3.228 31.386 12.473 1.00 0.00 ATOM 220 CB THR 16 2.229 32.142 13.370 1.00 0.00 ATOM 222 CG2 THR 16 2.781 32.331 14.780 1.00 0.00 ATOM 226 OG1 THR 16 1.972 33.421 12.806 1.00 0.00 ATOM 228 C THR 16 2.725 31.360 11.079 1.00 0.00 ATOM 229 O THR 16 3.487 31.605 10.144 1.00 0.00 ATOM 230 N GLY 17 1.446 31.082 10.788 1.00 0.00 ATOM 232 CA GLY 17 0.998 30.985 9.430 1.00 0.00 ATOM 235 C GLY 17 1.144 29.635 8.910 1.00 0.00 ATOM 236 O GLY 17 1.313 29.452 7.706 1.00 0.00 ATOM 237 N GLN 18 1.087 28.573 9.742 1.00 0.00 ATOM 239 CA GLN 18 0.688 27.275 9.299 1.00 0.00 ATOM 241 CB GLN 18 1.471 26.105 9.898 1.00 0.00 ATOM 244 CG GLN 18 2.909 26.066 9.381 1.00 0.00 ATOM 247 CD GLN 18 3.663 24.866 9.944 1.00 0.00 ATOM 248 OE1 GLN 18 3.062 23.905 10.402 1.00 0.00 ATOM 249 NE2 GLN 18 4.978 24.900 9.920 1.00 0.00 ATOM 252 C GLN 18 -0.818 27.236 9.798 1.00 0.00 ATOM 253 O GLN 18 -1.115 26.610 10.813 1.00 0.00 ATOM 254 N ASN 19 -1.658 27.960 8.952 1.00 0.00 ATOM 256 CA ASN 19 -3.190 27.962 9.032 1.00 0.00 ATOM 258 CB ASN 19 -3.573 27.373 10.392 1.00 0.00 ATOM 261 CG ASN 19 -5.084 27.205 10.517 1.00 0.00 ATOM 262 OD1 ASN 19 -5.806 27.252 9.531 1.00 0.00 ATOM 263 ND2 ASN 19 -5.581 27.010 11.720 1.00 0.00 ATOM 266 C ASN 19 -3.936 29.364 8.808 1.00 0.00 ATOM 267 O ASN 19 -4.165 29.766 7.669 1.00 0.00 ATOM 268 N TRP 20 -4.279 30.058 9.848 1.00 0.00 ATOM 270 CA TRP 20 -4.798 31.464 9.723 1.00 0.00 ATOM 272 CB TRP 20 -5.987 31.582 10.681 1.00 0.00 ATOM 275 CG TRP 20 -7.171 30.786 10.209 1.00 0.00 ATOM 276 CD1 TRP 20 -7.199 29.964 9.129 1.00 0.00 ATOM 278 NE1 TRP 20 -8.451 29.408 9.012 1.00 0.00 ATOM 280 CE2 TRP 20 -9.271 29.860 10.021 1.00 0.00 ATOM 281 CZ2 TRP 20 -10.602 29.599 10.335 1.00 0.00 ATOM 283 CH2 TRP 20 -11.157 30.223 11.443 1.00 0.00 ATOM 285 CZ3 TRP 20 -10.391 31.095 12.223 1.00 0.00 ATOM 287 CE3 TRP 20 -9.058 31.355 11.907 1.00 0.00 ATOM 289 CD2 TRP 20 -8.483 30.733 10.792 1.00 0.00 ATOM 290 C TRP 20 -3.840 32.579 9.960 1.00 0.00 ATOM 291 O TRP 20 -2.758 32.359 10.502 1.00 0.00 ATOM 292 N ALA 21 -4.193 33.759 9.587 1.00 0.00 ATOM 294 CA ALA 21 -3.690 34.919 10.238 1.00 0.00 ATOM 296 CB ALA 21 -4.023 36.113 9.351 1.00 0.00 ATOM 300 C ALA 21 -4.182 35.168 11.667 1.00 0.00 ATOM 301 O ALA 21 -3.513 35.853 12.438 1.00 0.00 ATOM 302 N SER 22 -5.304 34.606 11.954 1.00 0.00 ATOM 304 CA SER 22 -5.851 34.716 13.310 1.00 0.00 ATOM 306 CB SER 22 -7.273 34.158 13.388 1.00 0.00 ATOM 309 OG SER 22 -8.152 34.953 12.606 1.00 0.00 ATOM 311 C SER 22 -4.888 33.913 14.331 1.00 0.00 ATOM 312 O SER 22 -4.746 34.311 15.485 1.00 0.00 ATOM 313 N LEU 23 -4.222 32.771 13.884 1.00 0.00 ATOM 315 CA LEU 23 -3.266 32.052 14.676 1.00 0.00 ATOM 317 CB LEU 23 -2.704 30.863 13.890 1.00 0.00 ATOM 320 CG LEU 23 -1.657 30.070 14.681 1.00 0.00 ATOM 322 CD1 LEU 23 -2.284 29.486 15.946 1.00 0.00 ATOM 326 CD2 LEU 23 -1.111 28.924 13.831 1.00 0.00 ATOM 330 C LEU 23 -2.178 32.937 15.092 1.00 0.00 ATOM 331 O LEU 23 -1.796 32.935 16.260 1.00 0.00 ATOM 332 N ALA 24 -1.656 33.720 14.150 1.00 0.00 ATOM 334 CA ALA 24 -0.663 34.745 14.460 1.00 0.00 ATOM 336 CB ALA 24 -0.277 35.381 13.130 1.00 0.00 ATOM 340 C ALA 24 -1.029 35.800 15.452 1.00 0.00 ATOM 341 O ALA 24 -0.240 36.109 16.341 1.00 0.00 ATOM 342 N ALA 25 -2.241 36.301 15.237 1.00 0.00 ATOM 344 CA ALA 25 -2.796 37.325 16.120 1.00 0.00 ATOM 346 CB ALA 25 -4.138 37.801 15.578 1.00 0.00 ATOM 350 C ALA 25 -2.954 36.812 17.548 1.00 0.00 ATOM 351 O ALA 25 -2.669 37.537 18.498 1.00 0.00 ATOM 352 N ASN 26 -3.376 35.627 17.613 1.00 0.00 ATOM 354 CA ASN 26 -3.563 35.038 18.936 1.00 0.00 ATOM 356 CB ASN 26 -4.168 33.637 18.815 1.00 0.00 ATOM 359 CG ASN 26 -5.637 33.701 18.411 1.00 0.00 ATOM 360 OD1 ASN 26 -6.317 34.687 18.662 1.00 0.00 ATOM 361 ND2 ASN 26 -6.146 32.662 17.783 1.00 0.00 ATOM 364 C ASN 26 -2.249 34.979 19.711 1.00 0.00 ATOM 365 O ASN 26 -2.213 35.327 20.890 1.00 0.00 ATOM 366 N GLU 27 -1.209 34.549 19.039 1.00 0.00 ATOM 368 CA GLU 27 0.094 34.444 19.687 1.00 0.00 ATOM 370 CB GLU 27 1.087 33.748 18.752 1.00 0.00 ATOM 373 CG GLU 27 0.713 32.283 18.528 1.00 0.00 ATOM 376 CD GLU 27 0.837 31.483 19.820 1.00 0.00 ATOM 377 OE1 GLU 27 0.236 30.408 19.900 1.00 0.00 ATOM 378 OE2 GLU 27 1.535 31.954 20.726 1.00 0.00 ATOM 379 C GLU 27 0.660 35.872 20.122 1.00 0.00 ATOM 380 O GLU 27 1.190 36.016 21.222 1.00 0.00 ATOM 381 N LEU 28 0.504 36.813 19.242 1.00 0.00 ATOM 383 CA LEU 28 1.007 38.098 19.442 1.00 0.00 ATOM 385 CB LEU 28 1.104 38.825 18.097 1.00 0.00 ATOM 388 CG LEU 28 2.140 38.201 17.157 1.00 0.00 ATOM 390 CD1 LEU 28 2.105 38.897 15.797 1.00 0.00 ATOM 394 CD2 LEU 28 3.543 38.345 17.745 1.00 0.00 ATOM 398 C LEU 28 0.111 38.952 20.466 1.00 0.00 ATOM 399 O LEU 28 0.608 39.885 21.092 1.00 0.00 ATOM 400 N ARG 29 -1.185 38.495 20.522 1.00 0.00 ATOM 402 CA ARG 29 -2.125 39.124 21.416 1.00 0.00 ATOM 404 CB ARG 29 -1.704 39.012 22.884 1.00 0.00 ATOM 407 CG ARG 29 -1.858 37.583 23.406 1.00 0.00 ATOM 410 CD ARG 29 -1.631 37.532 24.916 1.00 0.00 ATOM 413 NE ARG 29 -1.773 36.141 25.395 1.00 0.00 ATOM 415 CZ ARG 29 -1.635 35.816 26.669 1.00 0.00 ATOM 416 NH1 ARG 29 -1.769 34.563 27.056 1.00 0.00 ATOM 419 NH2 ARG 29 -1.362 36.748 27.556 1.00 0.00 ATOM 422 C ARG 29 -2.209 40.604 21.005 1.00 0.00 ATOM 423 O ARG 29 -2.395 41.471 21.856 1.00 0.00 ATOM 424 N VAL 30 -2.076 40.803 19.738 1.00 0.00 ATOM 426 CA VAL 30 -2.202 42.159 19.200 1.00 0.00 ATOM 428 CB VAL 30 -0.949 42.706 18.482 1.00 0.00 ATOM 430 CG1 VAL 30 -1.247 44.061 17.842 1.00 0.00 ATOM 434 CG2 VAL 30 0.199 42.882 19.475 1.00 0.00 ATOM 438 C VAL 30 -3.276 42.010 18.266 1.00 0.00 ATOM 439 O VAL 30 -3.504 40.914 17.759 1.00 0.00 ATOM 440 N THR 31 -3.945 43.180 18.046 1.00 0.00 ATOM 442 CA THR 31 -5.197 43.123 17.249 1.00 0.00 ATOM 444 CB THR 31 -5.877 44.502 17.145 1.00 0.00 ATOM 446 CG2 THR 31 -7.169 44.424 16.333 1.00 0.00 ATOM 450 OG1 THR 31 -6.187 44.969 18.450 1.00 0.00 ATOM 452 C THR 31 -4.873 42.613 15.873 1.00 0.00 ATOM 453 O THR 31 -3.838 42.966 15.314 1.00 0.00 ATOM 454 N GLU 32 -5.734 41.813 15.345 1.00 0.00 ATOM 456 CA GLU 32 -5.552 41.272 13.996 1.00 0.00 ATOM 458 CB GLU 32 -6.554 40.132 13.793 1.00 0.00 ATOM 461 CG GLU 32 -6.354 39.445 12.441 1.00 0.00 ATOM 464 CD GLU 32 -7.052 38.090 12.409 1.00 0.00 ATOM 465 OE1 GLU 32 -7.096 37.484 11.334 1.00 0.00 ATOM 466 OE2 GLU 32 -7.540 37.666 13.463 1.00 0.00 ATOM 467 C GLU 32 -5.690 42.296 12.875 1.00 0.00 ATOM 468 O GLU 32 -5.103 42.127 11.809 1.00 0.00 ATOM 469 N ARG 33 -6.443 43.329 13.129 1.00 0.00 ATOM 471 CA ARG 33 -6.650 44.331 12.130 1.00 0.00 ATOM 473 CB ARG 33 -7.542 45.464 12.645 1.00 0.00 ATOM 476 CG ARG 33 -8.974 44.986 12.890 1.00 0.00 ATOM 479 CD ARG 33 -9.864 46.149 13.326 1.00 0.00 ATOM 482 NE ARG 33 -11.266 45.693 13.431 1.00 0.00 ATOM 484 CZ ARG 33 -11.696 44.960 14.443 1.00 0.00 ATOM 485 NH1 ARG 33 -12.954 44.573 14.499 1.00 0.00 ATOM 488 NH2 ARG 33 -10.861 44.613 15.400 1.00 0.00 ATOM 491 C ARG 33 -5.212 44.919 11.681 1.00 0.00 ATOM 492 O ARG 33 -4.906 44.957 10.491 1.00 0.00 ATOM 493 N PRO 34 -4.346 45.368 12.700 1.00 0.00 ATOM 494 CD PRO 34 -4.720 45.576 14.266 1.00 0.00 ATOM 497 CG PRO 34 -3.671 46.601 14.667 1.00 0.00 ATOM 500 CB PRO 34 -2.482 46.369 13.762 1.00 0.00 ATOM 503 CA PRO 34 -3.072 46.012 12.396 1.00 0.00 ATOM 505 C PRO 34 -2.158 45.036 11.632 1.00 0.00 ATOM 506 O PRO 34 -1.446 45.446 10.718 1.00 0.00 ATOM 507 N PHE 35 -2.169 43.734 11.990 1.00 0.00 ATOM 509 CA PHE 35 -1.383 42.686 11.302 1.00 0.00 ATOM 511 CB PHE 35 -1.542 41.349 12.033 1.00 0.00 ATOM 514 CG PHE 35 -0.867 41.356 13.386 1.00 0.00 ATOM 515 CD1 PHE 35 -1.373 40.584 14.429 1.00 0.00 ATOM 517 CE1 PHE 35 -0.749 40.593 15.675 1.00 0.00 ATOM 519 CZ PHE 35 0.383 41.374 15.882 1.00 0.00 ATOM 521 CE2 PHE 35 0.892 42.146 14.845 1.00 0.00 ATOM 523 CD2 PHE 35 0.266 42.138 13.598 1.00 0.00 ATOM 525 C PHE 35 -1.779 42.542 9.909 1.00 0.00 ATOM 526 O PHE 35 -0.928 42.355 9.042 1.00 0.00 ATOM 527 N TRP 36 -3.079 42.625 9.603 1.00 0.00 ATOM 529 CA TRP 36 -3.786 42.383 8.273 1.00 0.00 ATOM 531 CB TRP 36 -3.058 43.027 7.090 1.00 0.00 ATOM 534 CG TRP 36 -1.679 42.461 6.902 1.00 0.00 ATOM 535 CD1 TRP 36 -1.104 41.496 7.663 1.00 0.00 ATOM 537 NE1 TRP 36 0.163 41.237 7.191 1.00 0.00 ATOM 539 CE2 TRP 36 0.440 42.035 6.104 1.00 0.00 ATOM 540 CZ2 TRP 36 1.562 42.152 5.287 1.00 0.00 ATOM 542 CH2 TRP 36 1.534 43.071 4.248 1.00 0.00 ATOM 544 CZ3 TRP 36 0.400 43.859 4.031 1.00 0.00 ATOM 546 CE3 TRP 36 -0.723 43.742 4.849 1.00 0.00 ATOM 548 CD2 TRP 36 -0.711 42.819 5.902 1.00 0.00 ATOM 549 C TRP 36 -3.859 40.782 8.073 1.00 0.00 ATOM 550 O TRP 36 -3.755 40.035 9.042 1.00 0.00 ATOM 551 N ILE 37 -4.034 40.183 6.800 1.00 0.00 ATOM 553 CA ILE 37 -3.485 38.808 6.430 1.00 0.00 ATOM 555 CB ILE 37 -4.558 38.011 5.654 1.00 0.00 ATOM 557 CG2 ILE 37 -3.987 36.674 5.177 1.00 0.00 ATOM 561 CG1 ILE 37 -5.769 37.731 6.552 1.00 0.00 ATOM 564 CD1 ILE 37 -6.627 38.977 6.743 1.00 0.00 ATOM 568 C ILE 37 -2.214 38.878 5.630 1.00 0.00 ATOM 569 O ILE 37 -2.235 39.302 4.477 1.00 0.00 ATOM 570 N SER 38 -1.166 38.443 6.302 1.00 0.00 ATOM 572 CA SER 38 0.193 38.524 5.981 1.00 0.00 ATOM 574 CB SER 38 1.009 38.523 7.275 1.00 0.00 ATOM 577 OG SER 38 2.396 38.569 6.976 1.00 0.00 ATOM 579 C SER 38 0.661 37.444 5.093 1.00 0.00 ATOM 580 O SER 38 -0.124 36.581 4.704 1.00 0.00 ATOM 581 N SER 39 1.886 37.435 4.758 1.00 0.00 ATOM 583 CA SER 39 2.446 36.354 3.962 1.00 0.00 ATOM 585 CB SER 39 3.515 37.000 3.077 1.00 0.00 ATOM 588 OG SER 39 4.617 37.414 3.870 1.00 0.00 ATOM 590 C SER 39 3.022 35.134 4.660 1.00 0.00 ATOM 591 O SER 39 4.232 35.053 4.860 1.00 0.00 ATOM 592 N PHE 40 2.077 34.223 4.992 1.00 0.00 ATOM 594 CA PHE 40 2.504 32.758 4.920 1.00 0.00 ATOM 596 CB PHE 40 3.607 32.433 5.933 1.00 0.00 ATOM 599 CG PHE 40 4.049 30.989 5.848 1.00 0.00 ATOM 600 CD1 PHE 40 4.482 30.456 4.637 1.00 0.00 ATOM 602 CE1 PHE 40 4.889 29.125 4.560 1.00 0.00 ATOM 604 CZ PHE 40 4.864 28.324 5.696 1.00 0.00 ATOM 606 CE2 PHE 40 4.431 28.851 6.908 1.00 0.00 ATOM 608 CD2 PHE 40 4.025 30.182 6.983 1.00 0.00 ATOM 610 C PHE 40 1.233 31.867 5.204 1.00 0.00 ATOM 611 O PHE 40 0.118 32.382 5.261 1.00 0.00 ATOM 612 N ILE 41 1.308 30.557 5.392 1.00 0.00 ATOM 614 CA ILE 41 0.402 29.698 4.689 1.00 0.00 ATOM 616 CB ILE 41 0.738 28.192 4.744 1.00 0.00 ATOM 618 CG2 ILE 41 -0.393 27.371 4.121 1.00 0.00 ATOM 622 CG1 ILE 41 2.031 27.905 3.973 1.00 0.00 ATOM 625 CD1 ILE 41 2.516 26.476 4.198 1.00 0.00 ATOM 629 C ILE 41 -0.821 29.951 5.360 1.00 0.00 ATOM 630 O ILE 41 -0.948 29.650 6.545 1.00 0.00 ATOM 631 N GLY 42 -1.759 30.514 4.587 1.00 0.00 ATOM 633 CA GLY 42 -2.496 31.608 5.227 1.00 0.00 ATOM 636 C GLY 42 -3.779 31.782 4.510 1.00 0.00 ATOM 637 O GLY 42 -3.786 31.949 3.293 1.00 0.00 ATOM 638 N ARG 43 -4.773 31.740 5.292 1.00 0.00 ATOM 640 CA ARG 43 -5.977 32.361 4.984 1.00 0.00 ATOM 642 CB ARG 43 -6.981 31.248 4.677 1.00 0.00 ATOM 645 CG ARG 43 -7.091 30.252 5.831 1.00 0.00 ATOM 648 CD ARG 43 -7.888 29.019 5.409 1.00 0.00 ATOM 651 NE ARG 43 -7.960 28.061 6.532 1.00 0.00 ATOM 653 CZ ARG 43 -6.983 27.213 6.801 1.00 0.00 ATOM 654 NH1 ARG 43 -7.088 26.375 7.813 1.00 0.00 ATOM 657 NH2 ARG 43 -5.900 27.205 6.053 1.00 0.00 ATOM 660 C ARG 43 -6.524 33.261 5.950 1.00 0.00 ATOM 661 O ARG 43 -6.141 33.219 7.117 1.00 0.00 ATOM 662 N SER 44 -7.493 34.129 5.417 1.00 0.00 ATOM 664 CA SER 44 -8.700 34.315 6.151 1.00 0.00 ATOM 666 CB SER 44 -8.885 35.791 6.508 1.00 0.00 ATOM 669 OG SER 44 -8.945 36.575 5.326 1.00 0.00 ATOM 671 C SER 44 -9.892 33.823 5.363 1.00 0.00 ATOM 672 O SER 44 -9.994 34.090 4.168 1.00 0.00 ATOM 673 N LYS 45 -10.823 33.085 6.076 1.00 0.00 ATOM 675 CA LYS 45 -12.050 32.669 5.269 1.00 0.00 ATOM 677 CB LYS 45 -12.161 31.169 4.978 1.00 0.00 ATOM 680 CG LYS 45 -11.015 30.685 4.088 1.00 0.00 ATOM 683 CD LYS 45 -11.168 29.196 3.773 1.00 0.00 ATOM 686 CE LYS 45 -10.025 28.713 2.882 1.00 0.00 ATOM 689 NZ LYS 45 -10.192 27.266 2.583 1.00 0.00 ATOM 693 C LYS 45 -13.189 33.112 6.197 1.00 0.00 ATOM 694 O LYS 45 -13.011 33.162 7.411 1.00 0.00 TER END