####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS085_4-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS085_4-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 34 6 - 39 4.91 10.49 LONGEST_CONTINUOUS_SEGMENT: 34 7 - 40 4.73 10.57 LCS_AVERAGE: 68.29 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 13 20 - 32 1.54 15.23 LCS_AVERAGE: 18.65 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 20 - 29 0.40 17.16 LCS_AVERAGE: 11.73 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 6 17 3 3 4 5 6 7 9 11 12 13 13 15 15 17 20 20 21 23 24 25 LCS_GDT V 3 V 3 4 6 17 3 3 4 5 6 7 10 11 12 13 13 15 15 17 20 20 21 23 29 31 LCS_GDT Q 4 Q 4 4 6 17 3 3 4 5 6 7 10 11 12 13 13 15 15 17 20 20 24 24 29 31 LCS_GDT G 5 G 5 4 6 17 3 3 4 5 6 7 10 11 12 13 13 15 15 18 20 26 28 32 34 35 LCS_GDT P 6 P 6 3 6 34 2 3 4 5 6 7 10 12 17 19 21 23 25 29 31 33 35 35 35 36 LCS_GDT W 7 W 7 3 6 34 3 3 4 5 7 10 13 16 19 22 26 30 31 33 34 34 35 35 35 36 LCS_GDT V 8 V 8 3 5 34 3 3 3 5 10 11 13 16 19 22 26 30 31 33 34 34 35 35 35 36 LCS_GDT G 9 G 9 3 5 34 3 3 3 7 10 12 14 18 20 24 28 30 31 33 34 34 35 35 35 36 LCS_GDT S 10 S 10 3 5 34 3 3 3 5 5 8 10 13 15 18 28 29 31 33 34 34 35 35 35 36 LCS_GDT S 11 S 11 4 5 34 3 3 4 6 7 8 11 13 18 23 28 30 31 33 34 34 35 35 35 36 LCS_GDT Y 12 Y 12 4 5 34 3 3 4 7 10 11 13 17 20 23 28 30 31 33 34 34 35 35 35 36 LCS_GDT V 13 V 13 4 7 34 3 3 5 7 10 12 14 18 20 24 28 30 31 33 34 34 35 35 35 36 LCS_GDT A 14 A 14 4 7 34 3 4 5 7 10 12 14 18 20 24 28 30 31 33 34 34 35 35 35 36 LCS_GDT E 15 E 15 4 7 34 3 4 4 7 8 9 13 17 19 23 28 30 31 33 34 34 35 35 35 36 LCS_GDT T 16 T 16 4 7 34 3 4 4 7 8 9 11 16 19 24 28 30 31 33 34 34 35 35 35 36 LCS_GDT G 17 G 17 4 7 34 3 4 5 7 10 12 14 18 20 24 28 30 31 33 34 34 35 35 35 36 LCS_GDT Q 18 Q 18 4 7 34 3 4 4 6 7 9 13 18 20 24 28 30 31 33 34 34 35 35 35 36 LCS_GDT N 19 N 19 4 11 34 3 4 5 7 10 12 14 18 20 24 28 30 31 33 34 34 35 35 35 36 LCS_GDT W 20 W 20 10 13 34 8 10 10 11 13 13 13 15 18 22 24 27 31 33 34 34 35 35 35 36 LCS_GDT A 21 A 21 10 13 34 8 10 10 11 13 13 13 15 15 20 23 27 29 32 34 34 35 35 35 36 LCS_GDT S 22 S 22 10 13 34 8 10 10 11 13 13 13 15 20 24 27 30 31 33 34 34 35 35 35 36 LCS_GDT L 23 L 23 10 13 34 8 10 10 11 13 13 14 18 20 24 28 30 31 33 34 34 35 35 35 36 LCS_GDT A 24 A 24 10 13 34 8 10 10 11 13 13 13 16 20 24 28 30 31 33 34 34 35 35 35 36 LCS_GDT A 25 A 25 10 13 34 8 10 10 11 13 13 14 17 20 24 28 30 31 33 34 34 35 35 35 36 LCS_GDT N 26 N 26 10 13 34 8 10 10 11 13 13 14 18 20 24 28 30 31 33 34 34 35 35 35 36 LCS_GDT E 27 E 27 10 13 34 8 10 10 11 13 13 13 16 20 24 28 30 31 33 34 34 35 35 35 36 LCS_GDT L 28 L 28 10 13 34 8 10 10 11 13 13 13 16 20 24 28 30 31 33 34 34 35 35 35 36 LCS_GDT R 29 R 29 10 13 34 7 10 10 10 13 13 14 18 20 24 28 30 31 33 34 34 35 35 35 36 LCS_GDT V 30 V 30 3 13 34 3 3 4 9 13 13 14 18 20 24 28 30 31 33 34 34 35 35 35 36 LCS_GDT T 31 T 31 4 13 34 3 4 9 11 13 13 14 18 20 24 28 30 31 33 34 34 35 35 35 36 LCS_GDT E 32 E 32 4 13 34 3 4 9 11 13 13 14 18 20 24 28 30 31 33 34 34 35 35 35 36 LCS_GDT R 33 R 33 5 7 34 3 4 5 7 10 12 14 18 20 24 28 30 31 33 34 34 35 35 35 36 LCS_GDT P 34 P 34 5 7 34 4 4 5 7 9 11 14 18 20 24 28 30 31 33 34 34 35 35 35 36 LCS_GDT F 35 F 35 5 7 34 4 4 5 6 9 10 14 18 20 24 28 30 31 33 34 34 35 35 35 36 LCS_GDT W 36 W 36 5 7 34 4 4 5 7 9 11 14 18 20 24 28 30 31 33 34 34 35 35 35 36 LCS_GDT I 37 I 37 5 7 34 4 4 5 6 8 10 14 18 20 24 28 30 31 33 34 34 35 35 35 36 LCS_GDT S 38 S 38 4 6 34 3 4 5 7 10 12 14 18 20 24 28 30 31 33 34 34 35 35 35 36 LCS_GDT S 39 S 39 4 6 34 3 4 4 6 10 11 13 17 19 23 28 30 31 33 34 34 35 35 35 36 LCS_GDT F 40 F 40 4 6 34 3 4 4 4 5 6 11 13 14 19 22 27 29 33 34 34 35 35 35 36 LCS_GDT I 41 I 41 3 5 16 3 3 3 4 5 6 7 9 10 11 14 15 25 27 27 30 31 34 35 36 LCS_GDT G 42 G 42 3 5 12 3 3 3 4 5 5 8 9 10 10 11 11 13 14 15 16 19 19 27 30 LCS_GDT R 43 R 43 3 5 12 3 3 3 4 5 6 8 9 10 11 12 12 13 14 15 16 17 17 19 19 LCS_GDT S 44 S 44 3 5 12 3 3 3 4 5 6 8 9 10 11 12 12 13 14 15 16 16 17 17 18 LCS_GDT K 45 K 45 0 5 12 0 1 3 4 5 6 8 8 10 11 12 12 12 14 15 16 16 16 17 18 LCS_AVERAGE LCS_A: 32.89 ( 11.73 18.65 68.29 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 8 10 10 11 13 13 14 18 20 24 28 30 31 33 34 34 35 35 35 36 GDT PERCENT_AT 18.18 22.73 22.73 25.00 29.55 29.55 31.82 40.91 45.45 54.55 63.64 68.18 70.45 75.00 77.27 77.27 79.55 79.55 79.55 81.82 GDT RMS_LOCAL 0.32 0.40 0.40 1.26 1.54 1.54 2.44 2.93 3.12 3.58 3.95 4.19 4.29 4.60 4.73 4.73 5.03 5.03 5.03 5.39 GDT RMS_ALL_AT 16.97 17.16 17.16 15.43 15.23 15.23 11.31 11.30 11.42 11.54 10.96 10.62 10.63 10.53 10.57 10.57 10.38 10.38 10.38 10.27 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 15 E 15 # possible swapping detected: E 27 E 27 # possible swapping detected: E 32 E 32 # possible swapping detected: F 35 F 35 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 22.577 0 0.043 0.045 23.817 0.000 0.000 - LGA V 3 V 3 19.953 0 0.177 1.125 22.412 0.000 0.000 16.986 LGA Q 4 Q 4 22.333 0 0.175 0.740 29.277 0.000 0.000 26.710 LGA G 5 G 5 19.846 0 0.637 0.637 21.304 0.000 0.000 - LGA P 6 P 6 15.877 0 0.665 0.698 17.607 0.000 0.000 17.506 LGA W 7 W 7 9.552 0 0.420 0.391 13.056 0.000 0.000 13.056 LGA V 8 V 8 8.665 0 0.068 1.100 10.283 0.000 0.000 8.352 LGA G 9 G 9 2.197 0 0.389 0.389 4.866 17.273 17.273 - LGA S 10 S 10 6.325 0 0.702 0.668 9.352 1.364 0.909 9.352 LGA S 11 S 11 6.197 0 0.565 0.802 7.267 0.000 0.000 6.168 LGA Y 12 Y 12 4.900 0 0.084 1.188 5.701 6.364 6.515 4.381 LGA V 13 V 13 2.287 0 0.608 0.605 3.738 28.636 32.987 1.762 LGA A 14 A 14 1.807 0 0.583 0.582 3.446 33.636 30.545 - LGA E 15 E 15 5.521 0 0.086 1.186 8.962 4.545 2.020 8.962 LGA T 16 T 16 5.555 0 0.120 0.211 6.306 0.455 0.519 4.780 LGA G 17 G 17 2.555 0 0.594 0.594 3.782 20.909 20.909 - LGA Q 18 Q 18 4.009 0 0.065 0.898 10.713 7.727 3.434 9.057 LGA N 19 N 19 3.535 0 0.082 0.961 6.911 12.273 16.364 2.211 LGA W 20 W 20 8.699 0 0.612 0.498 16.392 0.000 0.000 16.392 LGA A 21 A 21 8.677 0 0.094 0.089 9.686 0.000 0.000 - LGA S 22 S 22 6.147 0 0.031 0.069 7.139 1.818 1.212 6.103 LGA L 23 L 23 3.918 0 0.034 0.149 4.855 7.273 9.773 4.415 LGA A 24 A 24 6.108 0 0.048 0.046 7.630 0.000 0.000 - LGA A 25 A 25 4.417 0 0.029 0.030 5.019 17.727 14.182 - LGA N 26 N 26 1.222 0 0.071 0.119 2.828 42.273 40.909 2.598 LGA E 27 E 27 4.983 0 0.099 0.855 6.263 5.000 2.424 4.531 LGA L 28 L 28 4.970 0 0.240 0.264 7.801 2.727 1.364 7.510 LGA R 29 R 29 1.939 0 0.631 1.434 6.170 38.636 17.190 5.999 LGA V 30 V 30 3.419 0 0.228 1.183 6.540 44.545 25.455 6.540 LGA T 31 T 31 2.852 0 0.711 0.638 5.949 33.182 19.221 5.949 LGA E 32 E 32 3.802 0 0.071 1.014 9.867 27.727 12.323 9.867 LGA R 33 R 33 1.111 0 0.241 0.996 7.084 40.000 17.190 7.043 LGA P 34 P 34 2.534 0 0.208 0.236 3.375 32.273 38.961 1.951 LGA F 35 F 35 3.727 0 0.065 1.192 11.786 18.636 7.273 11.786 LGA W 36 W 36 2.987 0 0.154 0.329 4.578 14.545 26.104 2.376 LGA I 37 I 37 3.704 0 0.587 0.616 8.404 26.818 13.409 8.404 LGA S 38 S 38 2.724 0 0.132 0.602 6.788 20.909 13.939 6.788 LGA S 39 S 39 6.188 0 0.695 0.800 7.645 1.364 0.909 5.873 LGA F 40 F 40 9.552 0 0.662 0.909 12.107 0.000 0.000 8.205 LGA I 41 I 41 14.615 0 0.053 1.207 16.966 0.000 0.000 15.895 LGA G 42 G 42 19.986 0 0.676 0.676 22.339 0.000 0.000 - LGA R 43 R 43 22.209 0 0.135 0.871 23.806 0.000 0.000 23.376 LGA S 44 S 44 26.776 0 0.600 0.767 30.153 0.000 0.000 30.153 LGA K 45 K 45 28.871 0 0.088 0.808 32.136 0.000 0.000 31.900 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 9.653 9.552 10.170 11.560 8.939 6.286 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 18 2.93 41.477 36.400 0.593 LGA_LOCAL RMSD: 2.934 Number of atoms: 18 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 11.301 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 9.653 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.815494 * X + 0.177957 * Y + 0.550727 * Z + -4.589321 Y_new = -0.197996 * X + 0.979922 * Y + -0.023459 * Z + 15.941172 Z_new = -0.543844 * X + -0.089911 * Y + 0.834356 * Z + 9.045036 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.238184 0.575011 -0.107347 [DEG: -13.6469 32.9457 -6.1505 ] ZXZ: 1.528226 0.583833 -1.734640 [DEG: 87.5609 33.4512 -99.3876 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS085_4-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS085_4-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 18 2.93 36.400 9.65 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS085_4-D1 PFRMAT TS TARGET T0953s2 MODEL 4 PARENT N/A ATOM 21 N ALA 2 -1.521 16.879 7.229 1.00 0.00 ATOM 23 CA ALA 2 -0.772 17.929 6.639 1.00 0.00 ATOM 25 CB ALA 2 0.662 17.471 6.407 1.00 0.00 ATOM 29 C ALA 2 -1.363 18.376 5.396 1.00 0.00 ATOM 30 O ALA 2 -2.101 17.626 4.759 1.00 0.00 ATOM 31 N VAL 3 -1.006 19.639 5.059 1.00 0.00 ATOM 33 CA VAL 3 -1.392 20.210 3.840 1.00 0.00 ATOM 35 CB VAL 3 -1.222 21.742 3.737 1.00 0.00 ATOM 37 CG1 VAL 3 -2.068 22.447 4.796 1.00 0.00 ATOM 41 CG2 VAL 3 0.240 22.131 3.948 1.00 0.00 ATOM 45 C VAL 3 -0.466 19.520 2.874 1.00 0.00 ATOM 46 O VAL 3 0.545 18.958 3.286 1.00 0.00 ATOM 47 N GLN 4 -0.864 19.602 1.562 1.00 0.00 ATOM 49 CA GLN 4 -0.047 18.899 0.526 1.00 0.00 ATOM 51 CB GLN 4 -0.804 18.556 -0.761 1.00 0.00 ATOM 54 CG GLN 4 -1.879 17.497 -0.514 1.00 0.00 ATOM 57 CD GLN 4 -2.633 17.172 -1.799 1.00 0.00 ATOM 58 OE1 GLN 4 -2.040 16.782 -2.794 1.00 0.00 ATOM 59 NE2 GLN 4 -3.940 17.324 -1.799 1.00 0.00 ATOM 62 C GLN 4 1.093 19.940 0.219 1.00 0.00 ATOM 63 O GLN 4 1.223 20.936 0.927 1.00 0.00 ATOM 64 N GLY 5 1.882 19.671 -0.840 1.00 0.00 ATOM 66 CA GLY 5 3.227 20.268 -1.019 1.00 0.00 ATOM 69 C GLY 5 3.182 21.795 -0.798 1.00 0.00 ATOM 70 O GLY 5 4.155 22.378 -0.324 1.00 0.00 ATOM 71 N PRO 6 2.122 22.441 -1.108 1.00 0.00 ATOM 72 CD PRO 6 1.844 23.069 -3.345 1.00 0.00 ATOM 75 CG PRO 6 0.504 23.060 -2.630 1.00 0.00 ATOM 78 CB PRO 6 0.599 24.097 -1.532 1.00 0.00 ATOM 81 CA PRO 6 1.964 23.872 -0.877 1.00 0.00 ATOM 83 C PRO 6 1.983 24.379 0.477 1.00 0.00 ATOM 84 O PRO 6 1.581 23.677 1.404 1.00 0.00 ATOM 85 N TRP 7 2.435 25.595 0.666 1.00 0.00 ATOM 87 CA TRP 7 2.663 26.287 1.898 1.00 0.00 ATOM 89 CB TRP 7 4.120 26.683 2.151 1.00 0.00 ATOM 92 CG TRP 7 5.006 25.483 2.338 1.00 0.00 ATOM 93 CD1 TRP 7 5.627 24.790 1.352 1.00 0.00 ATOM 95 NE1 TRP 7 6.349 23.758 1.904 1.00 0.00 ATOM 97 CE2 TRP 7 6.209 23.757 3.274 1.00 0.00 ATOM 98 CZ2 TRP 7 6.728 22.932 4.269 1.00 0.00 ATOM 100 CH2 TRP 7 6.394 23.197 5.591 1.00 0.00 ATOM 102 CZ3 TRP 7 5.555 24.269 5.907 1.00 0.00 ATOM 104 CE3 TRP 7 5.036 25.093 4.911 1.00 0.00 ATOM 106 CD2 TRP 7 5.363 24.841 3.572 1.00 0.00 ATOM 107 C TRP 7 1.833 27.490 1.747 1.00 0.00 ATOM 108 O TRP 7 1.796 28.082 0.670 1.00 0.00 ATOM 109 N VAL 8 1.109 27.960 2.793 1.00 0.00 ATOM 111 CA VAL 8 0.189 29.068 2.465 1.00 0.00 ATOM 113 CB VAL 8 -0.690 29.387 3.696 1.00 0.00 ATOM 115 CG1 VAL 8 0.181 29.616 4.930 1.00 0.00 ATOM 119 CG2 VAL 8 -1.518 30.647 3.446 1.00 0.00 ATOM 123 C VAL 8 0.940 30.401 1.962 1.00 0.00 ATOM 124 O VAL 8 0.501 31.029 1.001 1.00 0.00 ATOM 125 N GLY 9 2.023 30.704 2.667 1.00 0.00 ATOM 127 CA GLY 9 2.922 31.841 2.480 1.00 0.00 ATOM 130 C GLY 9 2.097 33.047 2.835 1.00 0.00 ATOM 131 O GLY 9 2.432 34.162 2.438 1.00 0.00 ATOM 132 N SER 10 1.056 32.871 3.559 1.00 0.00 ATOM 134 CA SER 10 0.520 33.999 4.456 1.00 0.00 ATOM 136 CB SER 10 -0.935 34.370 4.161 1.00 0.00 ATOM 139 OG SER 10 -1.788 33.279 4.473 1.00 0.00 ATOM 141 C SER 10 0.634 33.501 5.795 1.00 0.00 ATOM 142 O SER 10 0.700 32.290 5.999 1.00 0.00 ATOM 143 N SER 11 0.663 34.333 6.837 1.00 0.00 ATOM 145 CA SER 11 1.322 33.964 8.028 1.00 0.00 ATOM 147 CB SER 11 1.742 35.172 8.868 1.00 0.00 ATOM 150 OG SER 11 2.723 35.928 8.176 1.00 0.00 ATOM 152 C SER 11 0.399 33.143 8.776 1.00 0.00 ATOM 153 O SER 11 -0.283 33.639 9.669 1.00 0.00 ATOM 154 N TYR 12 0.390 31.776 8.376 1.00 0.00 ATOM 156 CA TYR 12 -0.210 30.758 9.164 1.00 0.00 ATOM 158 CB TYR 12 -1.522 30.423 8.445 1.00 0.00 ATOM 161 CG TYR 12 -2.477 31.599 8.416 1.00 0.00 ATOM 162 CD1 TYR 12 -2.537 32.433 7.298 1.00 0.00 ATOM 164 CE1 TYR 12 -3.417 33.517 7.272 1.00 0.00 ATOM 166 CZ TYR 12 -4.239 33.768 8.367 1.00 0.00 ATOM 167 OH TYR 12 -5.105 34.834 8.343 1.00 0.00 ATOM 169 CE2 TYR 12 -4.186 32.943 9.484 1.00 0.00 ATOM 171 CD2 TYR 12 -3.305 31.860 9.508 1.00 0.00 ATOM 173 C TYR 12 0.545 29.479 9.486 1.00 0.00 ATOM 174 O TYR 12 0.544 29.034 10.632 1.00 0.00 ATOM 175 N VAL 13 1.179 28.877 8.569 1.00 0.00 ATOM 177 CA VAL 13 1.801 27.613 8.709 1.00 0.00 ATOM 179 CB VAL 13 1.584 26.635 7.533 1.00 0.00 ATOM 181 CG1 VAL 13 2.350 25.335 7.768 1.00 0.00 ATOM 185 CG2 VAL 13 0.100 26.302 7.384 1.00 0.00 ATOM 189 C VAL 13 3.292 27.994 8.813 1.00 0.00 ATOM 190 O VAL 13 3.899 28.386 7.819 1.00 0.00 ATOM 191 N ALA 14 3.856 27.877 9.958 1.00 0.00 ATOM 193 CA ALA 14 5.203 28.374 10.042 1.00 0.00 ATOM 195 CB ALA 14 5.276 29.474 11.094 1.00 0.00 ATOM 199 C ALA 14 6.252 27.219 10.377 1.00 0.00 ATOM 200 O ALA 14 5.858 26.129 10.784 1.00 0.00 ATOM 201 N GLU 15 7.482 27.449 10.221 1.00 0.00 ATOM 203 CA GLU 15 8.491 26.479 10.479 1.00 0.00 ATOM 205 CB GLU 15 9.911 27.040 10.366 1.00 0.00 ATOM 208 CG GLU 15 10.268 27.374 8.918 1.00 0.00 ATOM 211 CD GLU 15 11.595 28.123 8.841 1.00 0.00 ATOM 212 OE1 GLU 15 12.231 28.289 9.885 1.00 0.00 ATOM 213 OE2 GLU 15 11.967 28.525 7.732 1.00 0.00 ATOM 214 C GLU 15 8.221 25.963 11.967 1.00 0.00 ATOM 215 O GLU 15 8.630 24.859 12.321 1.00 0.00 ATOM 216 N THR 16 7.577 26.667 12.825 1.00 0.00 ATOM 218 CA THR 16 7.269 26.268 14.230 1.00 0.00 ATOM 220 CB THR 16 6.672 27.514 14.913 1.00 0.00 ATOM 222 CG2 THR 16 7.669 28.671 14.928 1.00 0.00 ATOM 226 OG1 THR 16 5.512 27.923 14.201 1.00 0.00 ATOM 228 C THR 16 6.331 25.011 14.496 1.00 0.00 ATOM 229 O THR 16 6.579 24.241 15.421 1.00 0.00 ATOM 230 N GLY 17 5.315 24.955 13.593 1.00 0.00 ATOM 232 CA GLY 17 3.881 24.618 13.806 1.00 0.00 ATOM 235 C GLY 17 3.136 25.156 12.634 1.00 0.00 ATOM 236 O GLY 17 3.201 26.352 12.359 1.00 0.00 ATOM 237 N GLN 18 2.374 24.396 11.845 1.00 0.00 ATOM 239 CA GLN 18 1.168 24.921 11.132 1.00 0.00 ATOM 241 CB GLN 18 0.415 23.823 10.374 1.00 0.00 ATOM 244 CG GLN 18 1.315 23.126 9.354 1.00 0.00 ATOM 247 CD GLN 18 0.547 22.054 8.588 1.00 0.00 ATOM 248 OE1 GLN 18 -0.373 22.352 7.839 1.00 0.00 ATOM 249 NE2 GLN 18 0.906 20.799 8.759 1.00 0.00 ATOM 252 C GLN 18 0.298 25.519 12.142 1.00 0.00 ATOM 253 O GLN 18 -0.104 24.845 13.087 1.00 0.00 ATOM 254 N ASN 19 -0.036 26.785 11.997 1.00 0.00 ATOM 256 CA ASN 19 -1.223 27.334 12.622 1.00 0.00 ATOM 258 CB ASN 19 -2.359 26.305 12.615 1.00 0.00 ATOM 261 CG ASN 19 -2.646 25.808 11.202 1.00 0.00 ATOM 262 OD1 ASN 19 -2.529 26.551 10.238 1.00 0.00 ATOM 263 ND2 ASN 19 -3.023 24.555 11.059 1.00 0.00 ATOM 266 C ASN 19 -0.920 27.809 14.120 1.00 0.00 ATOM 267 O ASN 19 -1.678 28.594 14.684 1.00 0.00 ATOM 268 N TRP 20 0.221 27.224 14.550 1.00 0.00 ATOM 270 CA TRP 20 0.643 27.525 15.870 1.00 0.00 ATOM 272 CB TRP 20 1.752 26.574 16.329 1.00 0.00 ATOM 275 CG TRP 20 1.215 25.217 16.690 1.00 0.00 ATOM 276 CD1 TRP 20 1.383 24.078 15.975 1.00 0.00 ATOM 278 NE1 TRP 20 0.749 23.038 16.616 1.00 0.00 ATOM 280 CE2 TRP 20 0.150 23.485 17.772 1.00 0.00 ATOM 281 CZ2 TRP 20 -0.599 22.837 18.752 1.00 0.00 ATOM 283 CH2 TRP 20 -1.075 23.580 19.822 1.00 0.00 ATOM 285 CZ3 TRP 20 -0.807 24.950 19.909 1.00 0.00 ATOM 287 CE3 TRP 20 -0.058 25.597 18.927 1.00 0.00 ATOM 289 CD2 TRP 20 0.431 24.862 17.841 1.00 0.00 ATOM 290 C TRP 20 1.112 28.893 15.925 1.00 0.00 ATOM 291 O TRP 20 0.920 29.570 16.933 1.00 0.00 ATOM 292 N ALA 21 1.735 29.293 14.789 1.00 0.00 ATOM 294 CA ALA 21 2.379 30.516 14.723 1.00 0.00 ATOM 296 CB ALA 21 3.159 30.716 13.429 1.00 0.00 ATOM 300 C ALA 21 1.264 31.561 14.838 1.00 0.00 ATOM 301 O ALA 21 1.399 32.528 15.583 1.00 0.00 ATOM 302 N SER 22 0.134 31.354 14.085 1.00 0.00 ATOM 304 CA SER 22 -0.941 32.333 14.096 1.00 0.00 ATOM 306 CB SER 22 -2.094 31.894 13.191 1.00 0.00 ATOM 309 OG SER 22 -2.714 30.732 13.721 1.00 0.00 ATOM 311 C SER 22 -1.463 32.532 15.567 1.00 0.00 ATOM 312 O SER 22 -1.662 33.665 16.002 1.00 0.00 ATOM 313 N LEU 23 -1.668 31.435 16.305 1.00 0.00 ATOM 315 CA LEU 23 -2.237 31.527 17.625 1.00 0.00 ATOM 317 CB LEU 23 -2.583 30.126 18.137 1.00 0.00 ATOM 320 CG LEU 23 -3.756 29.490 17.382 1.00 0.00 ATOM 322 CD1 LEU 23 -3.936 28.037 17.816 1.00 0.00 ATOM 326 CD2 LEU 23 -5.048 30.253 17.673 1.00 0.00 ATOM 330 C LEU 23 -1.294 32.227 18.608 1.00 0.00 ATOM 331 O LEU 23 -1.740 33.030 19.425 1.00 0.00 ATOM 332 N ALA 24 -0.043 31.906 18.492 1.00 0.00 ATOM 334 CA ALA 24 0.897 32.469 19.373 1.00 0.00 ATOM 336 CB ALA 24 2.273 31.850 19.161 1.00 0.00 ATOM 340 C ALA 24 0.959 33.924 19.177 1.00 0.00 ATOM 341 O ALA 24 1.045 34.673 20.147 1.00 0.00 ATOM 342 N ALA 25 0.907 34.392 17.860 1.00 0.00 ATOM 344 CA ALA 25 1.056 35.761 17.543 1.00 0.00 ATOM 346 CB ALA 25 1.100 35.942 16.030 1.00 0.00 ATOM 350 C ALA 25 -0.062 36.586 18.137 1.00 0.00 ATOM 351 O ALA 25 0.185 37.668 18.666 1.00 0.00 ATOM 352 N ASN 26 -1.250 36.045 18.035 1.00 0.00 ATOM 354 CA ASN 26 -2.437 36.761 18.513 1.00 0.00 ATOM 356 CB ASN 26 -3.723 35.990 18.207 1.00 0.00 ATOM 359 CG ASN 26 -4.058 36.041 16.720 1.00 0.00 ATOM 360 OD1 ASN 26 -3.665 36.962 16.017 1.00 0.00 ATOM 361 ND2 ASN 26 -4.783 35.062 16.221 1.00 0.00 ATOM 364 C ASN 26 -2.314 36.979 19.936 1.00 0.00 ATOM 365 O ASN 26 -2.524 38.093 20.410 1.00 0.00 ATOM 366 N GLU 27 -1.980 35.993 20.653 1.00 0.00 ATOM 368 CA GLU 27 -1.865 36.123 22.180 1.00 0.00 ATOM 370 CB GLU 27 -1.559 34.773 22.834 1.00 0.00 ATOM 373 CG GLU 27 -2.747 33.816 22.727 1.00 0.00 ATOM 376 CD GLU 27 -2.418 32.464 23.350 1.00 0.00 ATOM 377 OE1 GLU 27 -3.320 31.626 23.433 1.00 0.00 ATOM 378 OE2 GLU 27 -1.259 32.275 23.740 1.00 0.00 ATOM 379 C GLU 27 -0.751 37.143 22.518 1.00 0.00 ATOM 380 O GLU 27 -0.935 37.991 23.389 1.00 0.00 ATOM 381 N LEU 28 0.305 37.016 21.833 1.00 0.00 ATOM 383 CA LEU 28 1.350 37.884 22.122 1.00 0.00 ATOM 385 CB LEU 28 2.572 37.502 21.283 1.00 0.00 ATOM 388 CG LEU 28 3.185 36.160 21.701 1.00 0.00 ATOM 390 CD1 LEU 28 4.294 35.762 20.729 1.00 0.00 ATOM 394 CD2 LEU 28 3.780 36.267 23.105 1.00 0.00 ATOM 398 C LEU 28 0.984 39.351 21.880 1.00 0.00 ATOM 399 O LEU 28 1.335 40.215 22.680 1.00 0.00 ATOM 400 N ARG 29 0.304 39.549 20.808 1.00 0.00 ATOM 402 CA ARG 29 -0.146 40.887 20.449 1.00 0.00 ATOM 404 CB ARG 29 0.332 41.228 19.036 1.00 0.00 ATOM 407 CG ARG 29 1.858 41.247 18.947 1.00 0.00 ATOM 410 CD ARG 29 2.313 41.627 17.539 1.00 0.00 ATOM 413 NE ARG 29 3.755 41.339 17.384 1.00 0.00 ATOM 415 CZ ARG 29 4.424 41.654 16.289 1.00 0.00 ATOM 416 NH1 ARG 29 5.709 41.379 16.192 1.00 0.00 ATOM 419 NH2 ARG 29 3.804 42.245 15.291 1.00 0.00 ATOM 422 C ARG 29 -1.656 41.031 20.537 1.00 0.00 ATOM 423 O ARG 29 -2.239 40.785 21.591 1.00 0.00 ATOM 424 N VAL 30 -2.199 41.434 19.353 1.00 0.00 ATOM 426 CA VAL 30 -3.656 41.706 19.342 1.00 0.00 ATOM 428 CB VAL 30 -4.058 43.193 19.218 1.00 0.00 ATOM 430 CG1 VAL 30 -3.526 43.993 20.407 1.00 0.00 ATOM 434 CG2 VAL 30 -3.485 43.794 17.936 1.00 0.00 ATOM 438 C VAL 30 -4.072 40.990 18.183 1.00 0.00 ATOM 439 O VAL 30 -3.264 40.741 17.291 1.00 0.00 ATOM 440 N THR 31 -5.277 40.642 18.125 1.00 0.00 ATOM 442 CA THR 31 -5.759 39.989 17.006 1.00 0.00 ATOM 444 CB THR 31 -7.095 39.276 17.287 1.00 0.00 ATOM 446 CG2 THR 31 -6.966 38.293 18.449 1.00 0.00 ATOM 450 OG1 THR 31 -8.081 40.245 17.617 1.00 0.00 ATOM 452 C THR 31 -5.945 40.995 15.891 1.00 0.00 ATOM 453 O THR 31 -5.942 42.199 16.140 1.00 0.00 ATOM 454 N GLU 32 -6.101 40.533 14.734 1.00 0.00 ATOM 456 CA GLU 32 -6.109 41.371 13.535 1.00 0.00 ATOM 458 CB GLU 32 -6.031 40.580 12.226 1.00 0.00 ATOM 461 CG GLU 32 -7.369 39.923 11.889 1.00 0.00 ATOM 464 CD GLU 32 -7.607 38.692 12.757 1.00 0.00 ATOM 465 OE1 GLU 32 -6.798 38.449 13.656 1.00 0.00 ATOM 466 OE2 GLU 32 -8.601 37.997 12.513 1.00 0.00 ATOM 467 C GLU 32 -7.398 42.108 13.611 1.00 0.00 ATOM 468 O GLU 32 -8.396 41.558 14.070 1.00 0.00 ATOM 469 N ARG 33 -7.326 43.347 13.143 1.00 0.00 ATOM 471 CA ARG 33 -8.480 44.213 12.971 1.00 0.00 ATOM 473 CB ARG 33 -8.589 45.359 13.981 1.00 0.00 ATOM 476 CG ARG 33 -8.783 44.839 15.406 1.00 0.00 ATOM 479 CD ARG 33 -8.875 45.998 16.397 1.00 0.00 ATOM 482 NE ARG 33 -9.259 45.487 17.729 1.00 0.00 ATOM 484 CZ ARG 33 -8.391 44.911 18.542 1.00 0.00 ATOM 485 NH1 ARG 33 -8.776 44.468 19.722 1.00 0.00 ATOM 488 NH2 ARG 33 -7.136 44.778 18.170 1.00 0.00 ATOM 491 C ARG 33 -8.250 44.739 11.652 1.00 0.00 ATOM 492 O ARG 33 -7.216 44.463 11.049 1.00 0.00 ATOM 493 N PRO 34 -9.259 45.569 11.126 1.00 0.00 ATOM 494 CD PRO 34 -10.689 45.933 11.636 1.00 0.00 ATOM 497 CG PRO 34 -11.339 46.310 10.316 1.00 0.00 ATOM 500 CB PRO 34 -10.240 46.879 9.447 1.00 0.00 ATOM 503 CA PRO 34 -8.992 46.061 9.783 1.00 0.00 ATOM 505 C PRO 34 -7.738 46.919 9.718 1.00 0.00 ATOM 506 O PRO 34 -7.704 48.007 10.288 1.00 0.00 ATOM 507 N PHE 35 -6.763 46.358 9.000 1.00 0.00 ATOM 509 CA PHE 35 -5.400 46.938 9.030 1.00 0.00 ATOM 511 CB PHE 35 -4.736 46.719 10.393 1.00 0.00 ATOM 514 CG PHE 35 -3.657 47.740 10.672 1.00 0.00 ATOM 515 CD1 PHE 35 -3.994 49.065 10.935 1.00 0.00 ATOM 517 CE1 PHE 35 -2.997 50.006 11.192 1.00 0.00 ATOM 519 CZ PHE 35 -1.661 49.623 11.185 1.00 0.00 ATOM 521 CE2 PHE 35 -1.320 48.302 10.923 1.00 0.00 ATOM 523 CD2 PHE 35 -2.316 47.362 10.666 1.00 0.00 ATOM 525 C PHE 35 -4.545 46.303 7.921 1.00 0.00 ATOM 526 O PHE 35 -4.613 45.095 7.705 1.00 0.00 ATOM 527 N TRP 36 -3.732 47.137 7.225 1.00 0.00 ATOM 529 CA TRP 36 -2.646 46.624 6.429 1.00 0.00 ATOM 531 CB TRP 36 -2.386 47.633 5.307 1.00 0.00 ATOM 534 CG TRP 36 -3.567 47.763 4.384 1.00 0.00 ATOM 535 CD1 TRP 36 -4.752 48.349 4.686 1.00 0.00 ATOM 537 NE1 TRP 36 -5.586 48.278 3.594 1.00 0.00 ATOM 539 CE2 TRP 36 -4.955 47.639 2.550 1.00 0.00 ATOM 540 CZ2 TRP 36 -5.364 47.323 1.258 1.00 0.00 ATOM 542 CH2 TRP 36 -4.476 46.659 0.423 1.00 0.00 ATOM 544 CZ3 TRP 36 -3.199 46.316 0.878 1.00 0.00 ATOM 546 CE3 TRP 36 -2.790 46.632 2.173 1.00 0.00 ATOM 548 CD2 TRP 36 -3.673 47.303 3.028 1.00 0.00 ATOM 549 C TRP 36 -1.326 46.309 7.173 1.00 0.00 ATOM 550 O TRP 36 -0.606 47.224 7.564 1.00 0.00 ATOM 551 N ILE 37 -1.143 44.991 7.287 1.00 0.00 ATOM 553 CA ILE 37 -0.118 44.250 7.943 1.00 0.00 ATOM 555 CB ILE 37 -0.492 44.248 9.443 1.00 0.00 ATOM 557 CG2 ILE 37 -1.758 43.421 9.674 1.00 0.00 ATOM 561 CG1 ILE 37 0.644 43.646 10.277 1.00 0.00 ATOM 564 CD1 ILE 37 0.403 43.830 11.771 1.00 0.00 ATOM 568 C ILE 37 0.212 42.798 7.470 1.00 0.00 ATOM 569 O ILE 37 -0.370 42.320 6.498 1.00 0.00 ATOM 570 N SER 38 1.081 42.183 8.143 1.00 0.00 ATOM 572 CA SER 38 1.288 40.777 7.724 1.00 0.00 ATOM 574 CB SER 38 2.330 40.124 8.634 1.00 0.00 ATOM 577 OG SER 38 2.530 38.771 8.252 1.00 0.00 ATOM 579 C SER 38 -0.042 39.929 7.739 1.00 0.00 ATOM 580 O SER 38 -0.320 39.202 6.787 1.00 0.00 ATOM 581 N SER 39 -0.831 39.985 8.709 1.00 0.00 ATOM 583 CA SER 39 -2.163 39.495 8.765 1.00 0.00 ATOM 585 CB SER 39 -2.718 39.581 10.187 1.00 0.00 ATOM 588 OG SER 39 -4.085 39.194 10.202 1.00 0.00 ATOM 590 C SER 39 -3.054 40.295 7.809 1.00 0.00 ATOM 591 O SER 39 -2.779 41.462 7.542 1.00 0.00 ATOM 592 N PHE 40 -4.088 39.685 7.322 1.00 0.00 ATOM 594 CA PHE 40 -5.023 40.367 6.437 1.00 0.00 ATOM 596 CB PHE 40 -5.954 39.366 5.744 1.00 0.00 ATOM 599 CG PHE 40 -5.189 38.357 4.918 1.00 0.00 ATOM 600 CD1 PHE 40 -4.806 37.138 5.472 1.00 0.00 ATOM 602 CE1 PHE 40 -4.101 36.209 4.708 1.00 0.00 ATOM 604 CZ PHE 40 -3.778 36.498 3.388 1.00 0.00 ATOM 606 CE2 PHE 40 -4.158 37.712 2.829 1.00 0.00 ATOM 608 CD2 PHE 40 -4.863 38.641 3.593 1.00 0.00 ATOM 610 C PHE 40 -5.815 41.341 7.207 1.00 0.00 ATOM 611 O PHE 40 -5.933 41.215 8.424 1.00 0.00 ATOM 612 N ILE 41 -6.398 42.375 6.430 1.00 0.00 ATOM 614 CA ILE 41 -7.421 43.238 7.004 1.00 0.00 ATOM 616 CB ILE 41 -7.884 44.306 5.987 1.00 0.00 ATOM 618 CG2 ILE 41 -6.699 45.165 5.543 1.00 0.00 ATOM 622 CG1 ILE 41 -8.493 43.637 4.750 1.00 0.00 ATOM 625 CD1 ILE 41 -9.123 44.660 3.811 1.00 0.00 ATOM 629 C ILE 41 -8.609 42.410 7.471 1.00 0.00 ATOM 630 O ILE 41 -9.052 41.512 6.759 1.00 0.00 ATOM 631 N GLY 42 -9.095 42.728 8.634 1.00 0.00 ATOM 633 CA GLY 42 -10.278 42.052 9.155 1.00 0.00 ATOM 636 C GLY 42 -11.433 42.518 8.318 1.00 0.00 ATOM 637 O GLY 42 -11.534 43.705 8.013 1.00 0.00 ATOM 638 N ARG 43 -12.384 41.602 7.903 1.00 0.00 ATOM 640 CA ARG 43 -13.348 42.025 6.866 1.00 0.00 ATOM 642 CB ARG 43 -13.738 40.936 5.863 1.00 0.00 ATOM 645 CG ARG 43 -12.558 40.538 4.974 1.00 0.00 ATOM 648 CD ARG 43 -12.450 41.471 3.769 1.00 0.00 ATOM 651 NE ARG 43 -11.284 41.091 2.946 1.00 0.00 ATOM 653 CZ ARG 43 -11.133 41.507 1.701 1.00 0.00 ATOM 654 NH1 ARG 43 -10.077 41.143 1.000 1.00 0.00 ATOM 657 NH2 ARG 43 -12.042 42.287 1.158 1.00 0.00 ATOM 660 C ARG 43 -14.529 42.410 7.686 1.00 0.00 ATOM 661 O ARG 43 -15.066 41.584 8.421 1.00 0.00 ATOM 662 N SER 44 -15.025 43.642 7.633 1.00 0.00 ATOM 664 CA SER 44 -16.279 44.160 8.178 1.00 0.00 ATOM 666 CB SER 44 -16.506 45.659 7.976 1.00 0.00 ATOM 669 OG SER 44 -16.642 45.949 6.593 1.00 0.00 ATOM 671 C SER 44 -17.290 43.385 7.400 1.00 0.00 ATOM 672 O SER 44 -18.306 42.969 7.951 1.00 0.00 ATOM 673 N LYS 45 -17.026 43.182 6.141 1.00 0.00 ATOM 675 CA LYS 45 -17.933 42.749 5.181 1.00 0.00 ATOM 677 CB LYS 45 -17.406 42.866 3.747 1.00 0.00 ATOM 680 CG LYS 45 -17.242 44.327 3.327 1.00 0.00 ATOM 683 CD LYS 45 -16.665 44.422 1.915 1.00 0.00 ATOM 686 CE LYS 45 -16.581 45.879 1.462 1.00 0.00 ATOM 689 NZ LYS 45 -16.030 45.952 0.083 1.00 0.00 ATOM 693 C LYS 45 -18.204 41.259 5.531 1.00 0.00 ATOM 694 O LYS 45 -17.470 40.669 6.320 1.00 0.00 TER END