####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS085_3-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS085_3-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 35 6 - 40 4.94 10.16 LCS_AVERAGE: 70.82 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 14 20 - 33 1.99 14.61 LCS_AVERAGE: 19.68 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 20 - 29 0.44 16.86 LCS_AVERAGE: 11.47 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 6 17 3 3 4 4 6 7 9 11 12 13 14 15 16 19 20 22 23 23 25 27 LCS_GDT V 3 V 3 4 6 17 3 3 4 5 6 7 9 11 12 13 14 15 16 19 20 22 23 24 30 30 LCS_GDT Q 4 Q 4 4 6 17 3 3 4 5 6 7 9 11 12 13 14 15 16 19 20 22 23 24 30 30 LCS_GDT G 5 G 5 4 6 17 3 3 4 5 6 7 9 11 12 13 14 15 16 19 20 24 28 33 35 35 LCS_GDT P 6 P 6 3 6 35 0 3 4 5 6 7 9 11 17 20 23 25 27 30 34 34 34 35 35 36 LCS_GDT W 7 W 7 3 6 35 3 3 4 5 7 11 15 18 21 24 28 30 31 33 34 34 34 35 35 36 LCS_GDT V 8 V 8 3 5 35 3 3 4 5 9 11 15 18 21 24 28 30 31 33 34 34 34 35 35 36 LCS_GDT G 9 G 9 3 5 35 3 3 6 9 10 12 16 18 21 24 28 30 31 33 34 34 34 35 35 36 LCS_GDT S 10 S 10 3 5 35 3 3 4 5 6 7 10 12 15 18 22 25 31 33 34 34 34 35 35 36 LCS_GDT S 11 S 11 4 5 35 3 4 4 6 6 8 10 14 17 21 26 30 31 33 34 34 34 35 35 36 LCS_GDT Y 12 Y 12 4 5 35 3 4 4 6 9 11 15 18 21 24 28 30 31 33 34 34 34 35 35 36 LCS_GDT V 13 V 13 4 7 35 3 4 6 9 10 12 16 18 21 24 28 30 31 33 34 34 34 35 35 36 LCS_GDT A 14 A 14 4 7 35 3 4 6 9 10 12 16 18 21 24 28 30 31 33 34 34 34 35 35 36 LCS_GDT E 15 E 15 4 7 35 3 4 4 6 8 9 15 18 21 24 28 30 31 33 34 34 34 35 35 36 LCS_GDT T 16 T 16 4 7 35 3 4 4 5 8 9 11 15 21 24 28 30 31 33 34 34 34 35 35 36 LCS_GDT G 17 G 17 4 7 35 3 4 4 6 9 12 16 18 21 24 28 30 31 33 34 34 34 35 35 36 LCS_GDT Q 18 Q 18 4 7 35 3 4 4 6 6 12 16 18 21 24 28 30 31 33 34 34 34 35 35 36 LCS_GDT N 19 N 19 4 11 35 3 4 4 6 9 11 16 18 21 24 28 30 31 33 34 34 34 35 35 36 LCS_GDT W 20 W 20 10 14 35 8 10 10 11 13 13 14 16 18 22 25 30 31 33 34 34 34 35 35 36 LCS_GDT A 21 A 21 10 14 35 8 10 10 11 13 13 14 15 18 21 25 28 31 33 34 34 34 35 35 36 LCS_GDT S 22 S 22 10 14 35 8 10 10 11 13 13 14 17 21 23 28 30 31 33 34 34 34 35 35 36 LCS_GDT L 23 L 23 10 14 35 8 10 10 11 13 13 16 18 21 24 28 30 31 33 34 34 34 35 35 36 LCS_GDT A 24 A 24 10 14 35 8 10 10 11 13 13 14 17 21 24 28 30 31 33 34 34 34 35 35 36 LCS_GDT A 25 A 25 10 14 35 8 10 10 11 13 13 15 18 21 24 28 30 31 33 34 34 34 35 35 36 LCS_GDT N 26 N 26 10 14 35 8 10 10 11 13 13 16 18 21 24 28 30 31 33 34 34 34 35 35 36 LCS_GDT E 27 E 27 10 14 35 7 10 10 11 13 13 14 17 20 23 28 30 31 33 34 34 34 35 35 36 LCS_GDT L 28 L 28 10 14 35 8 10 10 11 13 13 14 17 21 23 27 30 31 33 34 34 34 35 35 36 LCS_GDT R 29 R 29 10 14 35 7 10 10 10 13 13 16 18 21 24 28 30 31 33 34 34 34 35 35 36 LCS_GDT V 30 V 30 3 14 35 3 3 4 10 13 13 16 18 21 24 28 30 31 33 34 34 34 35 35 36 LCS_GDT T 31 T 31 4 14 35 3 3 9 11 13 13 16 18 21 24 28 30 31 33 34 34 34 35 35 36 LCS_GDT E 32 E 32 4 14 35 3 3 9 11 13 13 15 18 21 24 28 30 31 33 34 34 34 35 35 36 LCS_GDT R 33 R 33 4 14 35 3 4 6 9 10 13 16 18 21 24 28 30 31 33 34 34 34 35 35 36 LCS_GDT P 34 P 34 4 7 35 4 4 6 9 10 12 16 18 21 24 28 30 31 33 34 34 34 35 35 36 LCS_GDT F 35 F 35 4 7 35 4 4 5 9 10 12 15 18 21 24 28 30 31 33 34 34 34 35 35 36 LCS_GDT W 36 W 36 4 7 35 4 4 6 9 10 12 16 18 21 24 28 30 31 33 34 34 34 35 35 36 LCS_GDT I 37 I 37 4 7 35 4 4 5 9 10 12 16 18 21 23 28 30 31 33 34 34 34 35 35 36 LCS_GDT S 38 S 38 4 6 35 3 4 4 6 8 12 16 18 21 24 28 30 31 33 34 34 34 35 35 36 LCS_GDT S 39 S 39 4 6 35 3 4 4 5 9 11 15 18 21 24 28 30 31 33 34 34 34 35 35 36 LCS_GDT F 40 F 40 4 6 35 3 4 4 4 4 6 9 12 15 19 22 26 29 33 34 34 34 35 35 36 LCS_GDT I 41 I 41 3 5 30 3 3 3 4 5 6 7 9 10 14 14 19 24 25 27 31 32 35 35 36 LCS_GDT G 42 G 42 3 5 12 3 3 4 4 5 6 7 9 10 11 11 12 14 14 16 16 19 21 30 30 LCS_GDT R 43 R 43 3 5 12 3 3 4 4 5 6 7 9 10 11 12 12 14 14 16 16 16 18 18 20 LCS_GDT S 44 S 44 3 5 12 3 3 4 4 5 6 7 8 10 11 12 12 14 14 16 16 16 18 18 20 LCS_GDT K 45 K 45 0 5 12 0 1 4 4 5 6 7 8 10 11 12 12 14 14 16 16 16 18 18 20 LCS_AVERAGE LCS_A: 33.99 ( 11.47 19.68 70.82 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 8 10 10 11 13 13 16 18 21 24 28 30 31 33 34 34 34 35 35 36 GDT PERCENT_AT 18.18 22.73 22.73 25.00 29.55 29.55 36.36 40.91 47.73 54.55 63.64 68.18 70.45 75.00 77.27 77.27 77.27 79.55 79.55 81.82 GDT RMS_LOCAL 0.31 0.44 0.44 1.23 1.50 1.50 2.69 2.84 3.15 3.59 3.93 4.10 4.23 4.50 4.67 4.67 4.67 4.94 4.94 5.30 GDT RMS_ALL_AT 16.61 16.86 16.86 15.16 14.95 14.95 11.01 11.02 10.83 10.26 10.38 10.39 10.41 10.47 10.34 10.34 10.34 10.16 10.16 10.04 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 27 E 27 # possible swapping detected: F 35 F 35 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 20.623 0 0.066 0.075 22.142 0.000 0.000 - LGA V 3 V 3 18.475 0 0.184 1.096 21.247 0.000 0.000 15.450 LGA Q 4 Q 4 21.292 0 0.213 0.808 28.053 0.000 0.000 25.262 LGA G 5 G 5 19.231 0 0.615 0.615 20.605 0.000 0.000 - LGA P 6 P 6 15.075 0 0.656 0.640 17.138 0.000 0.000 16.838 LGA W 7 W 7 8.707 0 0.390 0.339 12.765 0.000 0.000 12.765 LGA V 8 V 8 7.778 0 0.073 0.076 11.321 0.000 0.000 7.599 LGA G 9 G 9 1.810 0 0.235 0.235 4.217 25.455 25.455 - LGA S 10 S 10 6.850 0 0.633 0.874 10.267 1.364 0.909 10.267 LGA S 11 S 11 6.351 0 0.607 0.884 7.807 0.000 0.000 5.862 LGA Y 12 Y 12 4.879 0 0.075 1.334 5.591 6.364 4.848 4.593 LGA V 13 V 13 2.338 0 0.346 1.219 4.330 31.364 31.429 4.330 LGA A 14 A 14 2.218 0 0.590 0.577 4.087 41.364 34.182 - LGA E 15 E 15 5.223 0 0.102 1.237 9.938 6.818 3.030 9.932 LGA T 16 T 16 5.710 0 0.139 0.184 7.389 0.909 0.519 5.509 LGA G 17 G 17 2.326 0 0.676 0.676 2.973 32.727 32.727 - LGA Q 18 Q 18 3.657 0 0.096 1.466 9.521 12.727 5.657 8.958 LGA N 19 N 19 3.368 0 0.142 0.968 6.828 17.273 16.364 3.143 LGA W 20 W 20 8.379 0 0.610 0.466 16.146 0.000 0.000 16.146 LGA A 21 A 21 8.239 0 0.073 0.067 9.165 0.000 0.000 - LGA S 22 S 22 5.863 0 0.041 0.056 6.785 3.182 2.121 5.733 LGA L 23 L 23 3.753 0 0.030 0.142 4.600 7.273 9.773 4.025 LGA A 24 A 24 6.047 0 0.066 0.060 7.510 0.000 0.000 - LGA A 25 A 25 4.389 0 0.055 0.052 4.986 15.455 12.727 - LGA N 26 N 26 1.294 0 0.027 0.059 2.990 39.545 42.500 2.562 LGA E 27 E 27 5.187 0 0.079 0.842 6.456 2.727 1.414 4.685 LGA L 28 L 28 5.174 0 0.259 0.267 7.887 1.818 0.909 7.565 LGA R 29 R 29 1.905 0 0.624 1.451 5.962 35.909 17.686 5.778 LGA V 30 V 30 3.313 0 0.189 1.157 6.502 48.182 27.532 6.502 LGA T 31 T 31 2.874 0 0.703 0.615 5.580 32.727 18.961 5.580 LGA E 32 E 32 4.012 0 0.056 0.907 9.937 21.818 9.697 9.937 LGA R 33 R 33 1.197 0 0.233 1.002 7.264 40.000 17.190 6.804 LGA P 34 P 34 2.324 0 0.186 0.210 2.772 39.545 45.455 1.773 LGA F 35 F 35 3.486 0 0.038 1.235 11.526 25.455 9.752 11.526 LGA W 36 W 36 2.458 0 0.163 0.162 4.046 22.273 32.987 2.377 LGA I 37 I 37 3.194 0 0.631 0.640 8.337 34.545 17.273 8.337 LGA S 38 S 38 3.347 0 0.117 0.610 7.462 17.727 11.818 7.462 LGA S 39 S 39 6.707 0 0.697 0.581 7.618 0.455 0.606 4.710 LGA F 40 F 40 9.680 0 0.632 0.892 12.294 0.000 0.000 8.495 LGA I 41 I 41 14.582 0 0.072 1.223 17.087 0.000 0.000 15.860 LGA G 42 G 42 20.035 0 0.610 0.610 22.455 0.000 0.000 - LGA R 43 R 43 22.101 0 0.154 1.230 24.653 0.000 0.000 23.175 LGA S 44 S 44 26.771 0 0.610 0.588 28.944 0.000 0.000 28.566 LGA K 45 K 45 28.902 0 0.049 0.787 32.411 0.000 0.000 32.166 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 9.461 9.381 10.032 12.841 9.853 4.312 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 18 2.84 41.477 36.997 0.613 LGA_LOCAL RMSD: 2.838 Number of atoms: 18 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 11.021 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 9.461 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.558846 * X + 0.049223 * Y + 0.827809 * Z + -1.226073 Y_new = -0.196118 * X + 0.977764 * Y + 0.074258 * Z + 17.077957 Z_new = -0.805747 * X + -0.203848 * Y + 0.556074 * Z + 10.770806 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.337507 0.936936 -0.351372 [DEG: -19.3377 53.6825 -20.1321 ] ZXZ: 1.660261 0.981142 -1.818589 [DEG: 95.1260 56.2153 -104.1975 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS085_3-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS085_3-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 18 2.84 36.997 9.46 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS085_3-D1 PFRMAT TS TARGET T0953s2 MODEL 3 PARENT N/A ATOM 21 N ALA 2 0.852 18.045 7.844 1.00 0.00 ATOM 23 CA ALA 2 1.235 19.026 6.944 1.00 0.00 ATOM 25 CB ALA 2 2.545 18.541 6.334 1.00 0.00 ATOM 29 C ALA 2 0.322 19.414 5.913 1.00 0.00 ATOM 30 O ALA 2 -0.549 18.632 5.538 1.00 0.00 ATOM 31 N VAL 3 0.486 20.594 5.428 1.00 0.00 ATOM 33 CA VAL 3 -0.171 21.135 4.291 1.00 0.00 ATOM 35 CB VAL 3 -0.062 22.672 4.171 1.00 0.00 ATOM 37 CG1 VAL 3 -0.713 23.349 5.375 1.00 0.00 ATOM 41 CG2 VAL 3 1.404 23.097 4.111 1.00 0.00 ATOM 45 C VAL 3 0.479 20.496 3.150 1.00 0.00 ATOM 46 O VAL 3 1.518 19.861 3.309 1.00 0.00 ATOM 47 N GLN 4 -0.073 20.615 1.908 1.00 0.00 ATOM 49 CA GLN 4 0.215 19.926 0.737 1.00 0.00 ATOM 51 CB GLN 4 -0.876 20.032 -0.331 1.00 0.00 ATOM 54 CG GLN 4 -0.589 19.115 -1.520 1.00 0.00 ATOM 57 CD GLN 4 -1.857 18.845 -2.323 1.00 0.00 ATOM 58 OE1 GLN 4 -2.931 19.319 -1.981 1.00 0.00 ATOM 59 NE2 GLN 4 -1.759 18.085 -3.393 1.00 0.00 ATOM 62 C GLN 4 1.586 20.610 0.203 1.00 0.00 ATOM 63 O GLN 4 2.320 21.212 0.985 1.00 0.00 ATOM 64 N GLY 5 1.886 20.521 -1.023 1.00 0.00 ATOM 66 CA GLY 5 3.112 21.154 -1.632 1.00 0.00 ATOM 69 C GLY 5 3.175 22.701 -1.348 1.00 0.00 ATOM 70 O GLY 5 4.244 23.230 -1.050 1.00 0.00 ATOM 71 N PRO 6 2.083 23.392 -1.433 1.00 0.00 ATOM 72 CD PRO 6 1.704 23.759 -3.470 1.00 0.00 ATOM 75 CG PRO 6 0.376 23.991 -2.773 1.00 0.00 ATOM 78 CB PRO 6 0.608 25.097 -1.767 1.00 0.00 ATOM 81 CA PRO 6 1.979 24.805 -1.153 1.00 0.00 ATOM 83 C PRO 6 2.051 25.300 0.322 1.00 0.00 ATOM 84 O PRO 6 1.629 24.588 1.231 1.00 0.00 ATOM 85 N TRP 7 2.585 26.513 0.467 1.00 0.00 ATOM 87 CA TRP 7 2.700 27.252 1.734 1.00 0.00 ATOM 89 CB TRP 7 4.143 27.604 2.104 1.00 0.00 ATOM 92 CG TRP 7 4.959 26.380 2.415 1.00 0.00 ATOM 93 CD1 TRP 7 5.821 25.763 1.570 1.00 0.00 ATOM 95 NE1 TRP 7 6.383 24.678 2.203 1.00 0.00 ATOM 97 CE2 TRP 7 5.892 24.567 3.485 1.00 0.00 ATOM 98 CZ2 TRP 7 6.142 23.657 4.510 1.00 0.00 ATOM 100 CH2 TRP 7 5.474 23.817 5.716 1.00 0.00 ATOM 102 CZ3 TRP 7 4.573 24.870 5.892 1.00 0.00 ATOM 104 CE3 TRP 7 4.324 25.781 4.866 1.00 0.00 ATOM 106 CD2 TRP 7 4.989 25.634 3.642 1.00 0.00 ATOM 107 C TRP 7 1.856 28.573 1.525 1.00 0.00 ATOM 108 O TRP 7 1.902 29.170 0.452 1.00 0.00 ATOM 109 N VAL 8 1.167 28.923 2.557 1.00 0.00 ATOM 111 CA VAL 8 0.374 30.152 2.333 1.00 0.00 ATOM 113 CB VAL 8 -0.487 30.373 3.597 1.00 0.00 ATOM 115 CG1 VAL 8 -1.185 31.731 3.539 1.00 0.00 ATOM 119 CG2 VAL 8 -1.553 29.285 3.712 1.00 0.00 ATOM 123 C VAL 8 1.096 31.372 2.001 1.00 0.00 ATOM 124 O VAL 8 0.690 32.101 1.100 1.00 0.00 ATOM 125 N GLY 9 2.169 31.591 2.721 1.00 0.00 ATOM 127 CA GLY 9 3.055 32.700 2.670 1.00 0.00 ATOM 130 C GLY 9 2.577 33.876 3.573 1.00 0.00 ATOM 131 O GLY 9 3.356 34.777 3.875 1.00 0.00 ATOM 132 N SER 10 1.362 33.899 4.008 1.00 0.00 ATOM 134 CA SER 10 0.896 35.141 4.772 1.00 0.00 ATOM 136 CB SER 10 -0.084 35.969 3.938 1.00 0.00 ATOM 139 OG SER 10 -0.481 37.126 4.661 1.00 0.00 ATOM 141 C SER 10 0.255 34.728 6.034 1.00 0.00 ATOM 142 O SER 10 -0.750 34.022 6.012 1.00 0.00 ATOM 143 N SER 11 0.754 35.121 7.255 1.00 0.00 ATOM 145 CA SER 11 1.316 34.353 8.269 1.00 0.00 ATOM 147 CB SER 11 1.957 35.219 9.356 1.00 0.00 ATOM 150 OG SER 11 3.082 35.908 8.829 1.00 0.00 ATOM 152 C SER 11 0.163 33.459 8.902 1.00 0.00 ATOM 153 O SER 11 -0.750 33.986 9.532 1.00 0.00 ATOM 154 N TYR 12 0.356 32.125 8.647 1.00 0.00 ATOM 156 CA TYR 12 -0.410 31.290 9.450 1.00 0.00 ATOM 158 CB TYR 12 -1.725 30.825 8.813 1.00 0.00 ATOM 161 CG TYR 12 -2.668 31.980 8.540 1.00 0.00 ATOM 162 CD1 TYR 12 -3.259 32.129 7.284 1.00 0.00 ATOM 164 CE1 TYR 12 -4.127 33.192 7.033 1.00 0.00 ATOM 166 CZ TYR 12 -4.408 34.110 8.041 1.00 0.00 ATOM 167 OH TYR 12 -5.262 35.157 7.796 1.00 0.00 ATOM 169 CE2 TYR 12 -3.824 33.970 9.295 1.00 0.00 ATOM 171 CD2 TYR 12 -2.957 32.905 9.543 1.00 0.00 ATOM 173 C TYR 12 0.530 30.067 9.676 1.00 0.00 ATOM 174 O TYR 12 0.438 29.399 10.704 1.00 0.00 ATOM 175 N VAL 13 1.420 29.727 8.816 1.00 0.00 ATOM 177 CA VAL 13 1.510 28.370 8.315 1.00 0.00 ATOM 179 CB VAL 13 1.467 28.342 6.771 1.00 0.00 ATOM 181 CG1 VAL 13 0.117 28.841 6.262 1.00 0.00 ATOM 185 CG2 VAL 13 2.564 29.236 6.193 1.00 0.00 ATOM 189 C VAL 13 2.869 27.661 8.849 1.00 0.00 ATOM 190 O VAL 13 3.340 26.699 8.247 1.00 0.00 ATOM 191 N ALA 14 3.546 28.098 9.997 1.00 0.00 ATOM 193 CA ALA 14 4.812 28.778 10.112 1.00 0.00 ATOM 195 CB ALA 14 4.507 30.148 10.705 1.00 0.00 ATOM 199 C ALA 14 5.851 28.141 10.850 1.00 0.00 ATOM 200 O ALA 14 5.631 27.711 11.980 1.00 0.00 ATOM 201 N GLU 15 7.011 28.027 10.328 1.00 0.00 ATOM 203 CA GLU 15 7.840 26.744 10.376 1.00 0.00 ATOM 205 CB GLU 15 9.217 26.978 9.749 1.00 0.00 ATOM 208 CG GLU 15 9.112 27.226 8.245 1.00 0.00 ATOM 211 CD GLU 15 10.491 27.444 7.630 1.00 0.00 ATOM 212 OE1 GLU 15 10.778 26.813 6.609 1.00 0.00 ATOM 213 OE2 GLU 15 11.251 28.243 8.187 1.00 0.00 ATOM 214 C GLU 15 7.998 26.231 11.842 1.00 0.00 ATOM 215 O GLU 15 8.313 25.063 12.055 1.00 0.00 ATOM 216 N THR 16 7.809 26.969 12.849 1.00 0.00 ATOM 218 CA THR 16 7.660 26.427 14.243 1.00 0.00 ATOM 220 CB THR 16 7.563 27.568 15.276 1.00 0.00 ATOM 222 CG2 THR 16 8.817 28.440 15.259 1.00 0.00 ATOM 226 OG1 THR 16 6.439 28.380 14.969 1.00 0.00 ATOM 228 C THR 16 6.351 25.492 14.344 1.00 0.00 ATOM 229 O THR 16 6.391 24.444 14.984 1.00 0.00 ATOM 230 N GLY 17 5.180 25.857 13.709 1.00 0.00 ATOM 232 CA GLY 17 3.991 24.999 13.668 1.00 0.00 ATOM 235 C GLY 17 2.952 25.626 12.723 1.00 0.00 ATOM 236 O GLY 17 2.947 26.841 12.532 1.00 0.00 ATOM 237 N GLN 18 2.149 24.775 12.207 1.00 0.00 ATOM 239 CA GLN 18 1.113 25.224 11.359 1.00 0.00 ATOM 241 CB GLN 18 0.711 24.080 10.425 1.00 0.00 ATOM 244 CG GLN 18 -0.278 24.547 9.357 1.00 0.00 ATOM 247 CD GLN 18 -0.678 23.398 8.438 1.00 0.00 ATOM 248 OE1 GLN 18 0.157 22.603 8.027 1.00 0.00 ATOM 249 NE2 GLN 18 -1.945 23.290 8.102 1.00 0.00 ATOM 252 C GLN 18 -0.108 25.748 12.098 1.00 0.00 ATOM 253 O GLN 18 -0.734 25.011 12.856 1.00 0.00 ATOM 254 N ASN 19 -0.424 27.006 11.858 1.00 0.00 ATOM 256 CA ASN 19 -1.535 27.655 12.537 1.00 0.00 ATOM 258 CB ASN 19 -2.794 26.789 12.441 1.00 0.00 ATOM 261 CG ASN 19 -3.193 26.555 10.987 1.00 0.00 ATOM 262 OD1 ASN 19 -2.993 27.407 10.133 1.00 0.00 ATOM 263 ND2 ASN 19 -3.758 25.404 10.686 1.00 0.00 ATOM 266 C ASN 19 -1.219 27.940 13.957 1.00 0.00 ATOM 267 O ASN 19 -2.009 28.582 14.647 1.00 0.00 ATOM 268 N TRP 20 -0.029 27.456 14.402 1.00 0.00 ATOM 270 CA TRP 20 0.411 27.689 15.696 1.00 0.00 ATOM 272 CB TRP 20 1.570 26.765 16.084 1.00 0.00 ATOM 275 CG TRP 20 1.110 25.351 16.305 1.00 0.00 ATOM 276 CD1 TRP 20 1.300 24.310 15.457 1.00 0.00 ATOM 278 NE1 TRP 20 0.742 23.174 15.997 1.00 0.00 ATOM 280 CE2 TRP 20 0.173 23.455 17.218 1.00 0.00 ATOM 281 CZ2 TRP 20 -0.503 22.663 18.144 1.00 0.00 ATOM 283 CH2 TRP 20 -0.967 23.255 19.310 1.00 0.00 ATOM 285 CZ3 TRP 20 -0.759 24.618 19.543 1.00 0.00 ATOM 287 CE3 TRP 20 -0.082 25.409 18.617 1.00 0.00 ATOM 289 CD2 TRP 20 0.393 24.828 17.435 1.00 0.00 ATOM 290 C TRP 20 0.839 29.105 15.791 1.00 0.00 ATOM 291 O TRP 20 0.645 29.741 16.825 1.00 0.00 ATOM 292 N ALA 21 1.422 29.572 14.664 1.00 0.00 ATOM 294 CA ALA 21 2.012 30.896 14.659 1.00 0.00 ATOM 296 CB ALA 21 2.756 31.164 13.357 1.00 0.00 ATOM 300 C ALA 21 0.953 31.889 14.852 1.00 0.00 ATOM 301 O ALA 21 1.118 32.821 15.635 1.00 0.00 ATOM 302 N SER 22 -0.163 31.731 14.166 1.00 0.00 ATOM 304 CA SER 22 -1.148 32.701 14.231 1.00 0.00 ATOM 306 CB SER 22 -2.289 32.366 13.268 1.00 0.00 ATOM 309 OG SER 22 -2.924 31.161 13.666 1.00 0.00 ATOM 311 C SER 22 -1.685 32.834 15.641 1.00 0.00 ATOM 312 O SER 22 -1.876 33.948 16.125 1.00 0.00 ATOM 313 N LEU 23 -1.912 31.607 16.273 1.00 0.00 ATOM 315 CA LEU 23 -2.466 31.624 17.623 1.00 0.00 ATOM 317 CB LEU 23 -2.844 30.200 18.041 1.00 0.00 ATOM 320 CG LEU 23 -4.034 29.645 17.251 1.00 0.00 ATOM 322 CD1 LEU 23 -4.260 28.176 17.603 1.00 0.00 ATOM 326 CD2 LEU 23 -5.301 30.429 17.583 1.00 0.00 ATOM 330 C LEU 23 -1.510 32.220 18.624 1.00 0.00 ATOM 331 O LEU 23 -1.929 32.960 19.513 1.00 0.00 ATOM 332 N ALA 24 -0.261 31.904 18.469 1.00 0.00 ATOM 334 CA ALA 24 0.699 32.390 19.369 1.00 0.00 ATOM 336 CB ALA 24 2.071 31.783 19.099 1.00 0.00 ATOM 340 C ALA 24 0.757 33.829 19.253 1.00 0.00 ATOM 341 O ALA 24 0.846 34.526 20.261 1.00 0.00 ATOM 342 N ALA 25 0.699 34.340 17.966 1.00 0.00 ATOM 344 CA ALA 25 0.840 35.714 17.692 1.00 0.00 ATOM 346 CB ALA 25 0.852 35.963 16.189 1.00 0.00 ATOM 350 C ALA 25 -0.225 36.449 18.309 1.00 0.00 ATOM 351 O ALA 25 0.013 37.504 18.893 1.00 0.00 ATOM 352 N ASN 26 -1.415 35.971 18.237 1.00 0.00 ATOM 354 CA ASN 26 -2.516 36.774 18.704 1.00 0.00 ATOM 356 CB ASN 26 -3.853 36.105 18.368 1.00 0.00 ATOM 359 CG ASN 26 -4.156 36.196 16.876 1.00 0.00 ATOM 360 OD1 ASN 26 -3.584 37.011 16.166 1.00 0.00 ATOM 361 ND2 ASN 26 -5.053 35.368 16.382 1.00 0.00 ATOM 364 C ASN 26 -2.413 37.017 20.208 1.00 0.00 ATOM 365 O ASN 26 -2.619 38.138 20.666 1.00 0.00 ATOM 366 N GLU 27 -2.097 35.980 20.919 1.00 0.00 ATOM 368 CA GLU 27 -1.998 36.118 22.370 1.00 0.00 ATOM 370 CB GLU 27 -1.778 34.746 23.015 1.00 0.00 ATOM 373 CG GLU 27 -2.990 33.835 22.821 1.00 0.00 ATOM 376 CD GLU 27 -2.731 32.450 23.403 1.00 0.00 ATOM 377 OE1 GLU 27 -3.663 31.641 23.415 1.00 0.00 ATOM 378 OE2 GLU 27 -1.598 32.208 23.834 1.00 0.00 ATOM 379 C GLU 27 -0.902 37.045 22.757 1.00 0.00 ATOM 380 O GLU 27 -1.068 37.846 23.674 1.00 0.00 ATOM 381 N LEU 28 0.198 36.948 22.067 1.00 0.00 ATOM 383 CA LEU 28 1.383 37.825 22.347 1.00 0.00 ATOM 385 CB LEU 28 2.559 37.424 21.451 1.00 0.00 ATOM 388 CG LEU 28 3.138 36.051 21.809 1.00 0.00 ATOM 390 CD1 LEU 28 4.198 35.644 20.788 1.00 0.00 ATOM 394 CD2 LEU 28 3.782 36.094 23.194 1.00 0.00 ATOM 398 C LEU 28 1.052 39.250 22.141 1.00 0.00 ATOM 399 O LEU 28 1.410 40.091 22.962 1.00 0.00 ATOM 400 N ARG 29 0.310 39.503 20.955 1.00 0.00 ATOM 402 CA ARG 29 -0.050 40.805 20.572 1.00 0.00 ATOM 404 CB ARG 29 0.411 41.047 19.132 1.00 0.00 ATOM 407 CG ARG 29 1.927 40.907 18.994 1.00 0.00 ATOM 410 CD ARG 29 2.369 41.211 17.562 1.00 0.00 ATOM 413 NE ARG 29 3.835 41.057 17.450 1.00 0.00 ATOM 415 CZ ARG 29 4.478 41.243 16.311 1.00 0.00 ATOM 416 NH1 ARG 29 5.787 41.095 16.253 1.00 0.00 ATOM 419 NH2 ARG 29 3.809 41.575 15.228 1.00 0.00 ATOM 422 C ARG 29 -1.529 41.077 20.695 1.00 0.00 ATOM 423 O ARG 29 -2.085 40.979 21.786 1.00 0.00 ATOM 424 N VAL 30 -2.073 41.392 19.585 1.00 0.00 ATOM 426 CA VAL 30 -3.425 41.643 19.410 1.00 0.00 ATOM 428 CB VAL 30 -3.733 43.144 19.203 1.00 0.00 ATOM 430 CG1 VAL 30 -3.318 43.950 20.432 1.00 0.00 ATOM 434 CG2 VAL 30 -2.971 43.681 17.992 1.00 0.00 ATOM 438 C VAL 30 -3.852 40.889 18.263 1.00 0.00 ATOM 439 O VAL 30 -3.043 40.588 17.387 1.00 0.00 ATOM 440 N THR 31 -5.118 40.553 18.194 1.00 0.00 ATOM 442 CA THR 31 -5.749 39.905 17.115 1.00 0.00 ATOM 444 CB THR 31 -7.164 39.428 17.496 1.00 0.00 ATOM 446 CG2 THR 31 -7.124 38.458 18.674 1.00 0.00 ATOM 450 OG1 THR 31 -7.953 40.553 17.857 1.00 0.00 ATOM 452 C THR 31 -5.829 40.850 15.916 1.00 0.00 ATOM 453 O THR 31 -5.810 42.067 16.087 1.00 0.00 ATOM 454 N GLU 32 -5.922 40.276 14.745 1.00 0.00 ATOM 456 CA GLU 32 -6.027 41.116 13.558 1.00 0.00 ATOM 458 CB GLU 32 -6.001 40.260 12.289 1.00 0.00 ATOM 461 CG GLU 32 -7.289 39.450 12.133 1.00 0.00 ATOM 464 CD GLU 32 -7.318 38.277 13.106 1.00 0.00 ATOM 465 OE1 GLU 32 -8.331 37.573 13.139 1.00 0.00 ATOM 466 OE2 GLU 32 -6.323 38.092 13.817 1.00 0.00 ATOM 467 C GLU 32 -7.234 41.908 13.598 1.00 0.00 ATOM 468 O GLU 32 -8.240 41.471 14.152 1.00 0.00 ATOM 469 N ARG 33 -7.267 43.193 12.989 1.00 0.00 ATOM 471 CA ARG 33 -8.314 44.119 12.865 1.00 0.00 ATOM 473 CB ARG 33 -8.242 45.330 13.799 1.00 0.00 ATOM 476 CG ARG 33 -8.635 44.962 15.230 1.00 0.00 ATOM 479 CD ARG 33 -8.497 46.170 16.156 1.00 0.00 ATOM 482 NE ARG 33 -8.974 45.818 17.510 1.00 0.00 ATOM 484 CZ ARG 33 -8.270 45.061 18.332 1.00 0.00 ATOM 485 NH1 ARG 33 -8.731 44.771 19.533 1.00 0.00 ATOM 488 NH2 ARG 33 -7.100 44.593 17.950 1.00 0.00 ATOM 491 C ARG 33 -8.132 44.540 11.495 1.00 0.00 ATOM 492 O ARG 33 -7.120 44.214 10.879 1.00 0.00 ATOM 493 N PRO 34 -9.102 45.316 10.888 1.00 0.00 ATOM 494 CD PRO 34 -10.592 45.968 11.323 1.00 0.00 ATOM 497 CG PRO 34 -11.119 46.342 9.947 1.00 0.00 ATOM 500 CB PRO 34 -9.909 46.690 9.108 1.00 0.00 ATOM 503 CA PRO 34 -8.807 45.730 9.564 1.00 0.00 ATOM 505 C PRO 34 -7.442 46.474 9.727 1.00 0.00 ATOM 506 O PRO 34 -7.363 47.465 10.450 1.00 0.00 ATOM 507 N PHE 35 -6.453 46.002 9.077 1.00 0.00 ATOM 509 CA PHE 35 -5.193 46.667 8.978 1.00 0.00 ATOM 511 CB PHE 35 -4.455 46.673 10.320 1.00 0.00 ATOM 514 CG PHE 35 -3.212 47.534 10.281 1.00 0.00 ATOM 515 CD1 PHE 35 -3.318 48.922 10.251 1.00 0.00 ATOM 517 CE1 PHE 35 -2.171 49.715 10.215 1.00 0.00 ATOM 519 CZ PHE 35 -0.915 49.119 10.207 1.00 0.00 ATOM 521 CE2 PHE 35 -0.803 47.735 10.236 1.00 0.00 ATOM 523 CD2 PHE 35 -1.951 46.943 10.273 1.00 0.00 ATOM 525 C PHE 35 -4.365 45.977 7.944 1.00 0.00 ATOM 526 O PHE 35 -4.568 44.793 7.682 1.00 0.00 ATOM 527 N TRP 36 -3.388 46.701 7.316 1.00 0.00 ATOM 529 CA TRP 36 -2.474 45.996 6.319 1.00 0.00 ATOM 531 CB TRP 36 -2.195 46.885 5.104 1.00 0.00 ATOM 534 CG TRP 36 -3.396 47.009 4.210 1.00 0.00 ATOM 535 CD1 TRP 36 -4.247 48.063 4.161 1.00 0.00 ATOM 537 NE1 TRP 36 -5.225 47.817 3.225 1.00 0.00 ATOM 539 CE2 TRP 36 -5.028 46.587 2.639 1.00 0.00 ATOM 540 CZ2 TRP 36 -5.727 45.892 1.656 1.00 0.00 ATOM 542 CH2 TRP 36 -5.267 44.641 1.272 1.00 0.00 ATOM 544 CZ3 TRP 36 -4.123 44.096 1.864 1.00 0.00 ATOM 546 CE3 TRP 36 -3.424 44.791 2.848 1.00 0.00 ATOM 548 CD2 TRP 36 -3.876 46.055 3.248 1.00 0.00 ATOM 549 C TRP 36 -1.183 45.618 6.988 1.00 0.00 ATOM 550 O TRP 36 -0.286 46.449 7.107 1.00 0.00 ATOM 551 N ILE 37 -1.174 44.259 7.411 1.00 0.00 ATOM 553 CA ILE 37 -0.095 43.666 8.092 1.00 0.00 ATOM 555 CB ILE 37 -0.327 43.687 9.620 1.00 0.00 ATOM 557 CG2 ILE 37 -1.467 42.740 9.997 1.00 0.00 ATOM 561 CG1 ILE 37 0.941 43.244 10.359 1.00 0.00 ATOM 564 CD1 ILE 37 0.858 43.550 11.850 1.00 0.00 ATOM 568 C ILE 37 0.120 42.234 7.613 1.00 0.00 ATOM 569 O ILE 37 -0.563 41.782 6.696 1.00 0.00 ATOM 570 N SER 38 1.045 41.402 8.163 1.00 0.00 ATOM 572 CA SER 38 1.230 40.034 7.683 1.00 0.00 ATOM 574 CB SER 38 2.285 39.312 8.522 1.00 0.00 ATOM 577 OG SER 38 2.460 37.984 8.048 1.00 0.00 ATOM 579 C SER 38 -0.063 39.271 7.722 1.00 0.00 ATOM 580 O SER 38 -0.377 38.542 6.783 1.00 0.00 ATOM 581 N SER 39 -0.813 39.392 8.713 1.00 0.00 ATOM 583 CA SER 39 -2.172 38.841 8.551 1.00 0.00 ATOM 585 CB SER 39 -2.773 38.499 9.916 1.00 0.00 ATOM 588 OG SER 39 -2.986 39.687 10.665 1.00 0.00 ATOM 590 C SER 39 -3.092 39.837 7.805 1.00 0.00 ATOM 591 O SER 39 -2.802 41.031 7.764 1.00 0.00 ATOM 592 N PHE 40 -4.165 39.315 7.253 1.00 0.00 ATOM 594 CA PHE 40 -5.188 40.011 6.472 1.00 0.00 ATOM 596 CB PHE 40 -6.096 38.956 5.832 1.00 0.00 ATOM 599 CG PHE 40 -5.337 38.049 4.890 1.00 0.00 ATOM 600 CD1 PHE 40 -4.832 36.832 5.340 1.00 0.00 ATOM 602 CE1 PHE 40 -4.131 35.996 4.470 1.00 0.00 ATOM 604 CZ PHE 40 -3.936 36.377 3.148 1.00 0.00 ATOM 606 CE2 PHE 40 -4.438 37.591 2.694 1.00 0.00 ATOM 608 CD2 PHE 40 -5.138 38.425 3.563 1.00 0.00 ATOM 610 C PHE 40 -6.020 41.009 7.246 1.00 0.00 ATOM 611 O PHE 40 -6.174 40.874 8.458 1.00 0.00 ATOM 612 N ILE 41 -6.531 41.970 6.505 1.00 0.00 ATOM 614 CA ILE 41 -7.453 42.920 7.120 1.00 0.00 ATOM 616 CB ILE 41 -7.829 44.053 6.140 1.00 0.00 ATOM 618 CG2 ILE 41 -6.571 44.767 5.644 1.00 0.00 ATOM 622 CG1 ILE 41 -8.577 43.485 4.929 1.00 0.00 ATOM 625 CD1 ILE 41 -9.126 44.594 4.037 1.00 0.00 ATOM 629 C ILE 41 -8.713 42.192 7.592 1.00 0.00 ATOM 630 O ILE 41 -9.199 41.294 6.907 1.00 0.00 ATOM 631 N GLY 42 -9.173 42.629 8.739 1.00 0.00 ATOM 633 CA GLY 42 -10.346 41.986 9.257 1.00 0.00 ATOM 636 C GLY 42 -11.491 42.501 8.381 1.00 0.00 ATOM 637 O GLY 42 -11.763 43.699 8.366 1.00 0.00 ATOM 638 N ARG 43 -12.097 41.518 7.698 1.00 0.00 ATOM 640 CA ARG 43 -13.229 41.964 6.845 1.00 0.00 ATOM 642 CB ARG 43 -13.484 40.870 5.805 1.00 0.00 ATOM 645 CG ARG 43 -12.232 40.573 4.979 1.00 0.00 ATOM 648 CD ARG 43 -11.945 41.713 4.004 1.00 0.00 ATOM 651 NE ARG 43 -13.070 41.855 3.055 1.00 0.00 ATOM 653 CZ ARG 43 -13.203 41.076 1.997 1.00 0.00 ATOM 654 NH1 ARG 43 -14.221 41.236 1.176 1.00 0.00 ATOM 657 NH2 ARG 43 -12.315 40.134 1.762 1.00 0.00 ATOM 660 C ARG 43 -14.513 42.299 7.572 1.00 0.00 ATOM 661 O ARG 43 -15.088 41.439 8.236 1.00 0.00 ATOM 662 N SER 44 -15.013 43.566 7.464 1.00 0.00 ATOM 664 CA SER 44 -16.240 44.045 7.986 1.00 0.00 ATOM 666 CB SER 44 -16.406 45.552 7.776 1.00 0.00 ATOM 669 OG SER 44 -15.436 46.258 8.537 1.00 0.00 ATOM 671 C SER 44 -17.331 43.323 7.304 1.00 0.00 ATOM 672 O SER 44 -18.315 42.951 7.939 1.00 0.00 ATOM 673 N LYS 45 -17.121 43.128 5.993 1.00 0.00 ATOM 675 CA LYS 45 -18.032 42.414 5.084 1.00 0.00 ATOM 677 CB LYS 45 -17.495 42.524 3.654 1.00 0.00 ATOM 680 CG LYS 45 -17.529 43.967 3.150 1.00 0.00 ATOM 683 CD LYS 45 -17.028 44.048 1.707 1.00 0.00 ATOM 686 CE LYS 45 -17.078 45.488 1.199 1.00 0.00 ATOM 689 NZ LYS 45 -16.553 45.553 -0.190 1.00 0.00 ATOM 693 C LYS 45 -18.234 40.983 5.450 1.00 0.00 ATOM 694 O LYS 45 -17.432 40.415 6.187 1.00 0.00 TER END