####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS085_2-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS085_2-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 34 6 - 39 4.89 10.53 LONGEST_CONTINUOUS_SEGMENT: 34 7 - 40 4.73 10.61 LCS_AVERAGE: 68.29 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 13 20 - 32 1.53 15.22 LCS_AVERAGE: 18.65 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 20 - 29 0.49 17.16 LCS_AVERAGE: 11.47 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 6 17 3 3 4 4 6 8 9 11 12 13 14 15 15 16 18 20 20 23 24 24 LCS_GDT V 3 V 3 4 6 17 3 3 4 5 6 8 9 11 12 13 14 15 15 16 18 20 20 23 24 26 LCS_GDT Q 4 Q 4 4 6 17 3 3 4 5 6 8 9 11 12 13 14 15 15 16 18 20 20 23 24 28 LCS_GDT G 5 G 5 4 6 17 3 3 4 5 6 8 9 11 12 13 14 15 15 16 23 26 28 31 33 35 LCS_GDT P 6 P 6 3 6 34 0 3 4 5 6 8 9 11 16 20 22 24 25 29 31 33 34 35 35 36 LCS_GDT W 7 W 7 3 6 34 3 3 4 5 6 10 14 16 19 23 27 30 31 33 34 34 34 35 35 36 LCS_GDT V 8 V 8 3 5 34 3 3 4 4 6 10 14 16 19 23 27 30 31 33 34 34 34 35 35 36 LCS_GDT G 9 G 9 3 5 34 3 3 4 5 9 12 14 18 21 23 28 30 31 33 34 34 34 35 35 36 LCS_GDT S 10 S 10 3 5 34 3 3 3 5 5 7 10 12 15 21 23 30 31 33 34 34 34 35 35 36 LCS_GDT S 11 S 11 4 5 34 3 4 4 6 6 9 12 15 18 23 28 30 31 33 34 34 34 35 35 36 LCS_GDT Y 12 Y 12 4 5 34 3 4 4 7 8 10 14 16 20 23 28 30 31 33 34 34 34 35 35 36 LCS_GDT V 13 V 13 4 7 34 3 4 5 7 9 12 14 18 21 23 28 30 31 33 34 34 34 35 35 36 LCS_GDT A 14 A 14 4 7 34 3 4 5 7 9 12 14 18 21 23 28 30 31 33 34 34 34 35 35 36 LCS_GDT E 15 E 15 4 7 34 3 4 4 6 7 10 13 16 19 23 28 30 31 33 34 34 34 35 35 36 LCS_GDT T 16 T 16 4 7 34 3 4 4 4 7 10 11 15 19 23 28 30 31 33 34 34 34 35 35 36 LCS_GDT G 17 G 17 4 7 34 3 4 5 7 9 12 14 18 21 23 28 30 31 33 34 34 34 35 35 36 LCS_GDT Q 18 Q 18 4 7 34 3 4 4 6 7 10 14 18 21 23 28 30 31 33 34 34 34 35 35 36 LCS_GDT N 19 N 19 4 11 34 3 4 5 7 9 13 14 18 21 23 28 30 31 33 34 34 34 35 35 36 LCS_GDT W 20 W 20 10 13 34 8 10 10 11 13 13 13 15 17 22 24 27 31 33 34 34 34 35 35 36 LCS_GDT A 21 A 21 10 13 34 8 10 10 11 13 13 13 15 16 20 23 27 29 32 34 34 34 35 35 36 LCS_GDT S 22 S 22 10 13 34 8 10 10 11 13 13 13 15 21 23 28 30 31 33 34 34 34 35 35 36 LCS_GDT L 23 L 23 10 13 34 8 10 10 11 13 13 14 18 21 23 28 30 31 33 34 34 34 35 35 36 LCS_GDT A 24 A 24 10 13 34 8 10 10 11 13 13 13 16 21 23 28 30 31 33 34 34 34 35 35 36 LCS_GDT A 25 A 25 10 13 34 8 10 10 11 13 13 13 18 21 23 28 30 31 33 34 34 34 35 35 36 LCS_GDT N 26 N 26 10 13 34 8 10 10 11 13 13 14 18 21 23 28 30 31 33 34 34 34 35 35 36 LCS_GDT E 27 E 27 10 13 34 6 10 10 11 13 13 13 16 20 23 28 30 31 33 34 34 34 35 35 36 LCS_GDT L 28 L 28 10 13 34 8 10 10 11 13 13 13 16 21 23 28 30 31 33 34 34 34 35 35 36 LCS_GDT R 29 R 29 10 13 34 6 10 10 10 13 13 14 18 21 23 28 30 31 33 34 34 34 35 35 36 LCS_GDT V 30 V 30 3 13 34 3 3 4 9 13 13 14 18 21 23 28 30 31 33 34 34 34 35 35 36 LCS_GDT T 31 T 31 4 13 34 3 7 9 11 13 13 14 18 21 23 28 30 31 33 34 34 34 35 35 36 LCS_GDT E 32 E 32 4 13 34 3 5 9 11 13 13 14 18 21 23 28 30 31 33 34 34 34 35 35 36 LCS_GDT R 33 R 33 4 7 34 3 4 5 7 9 13 14 18 21 23 28 30 31 33 34 34 34 35 35 36 LCS_GDT P 34 P 34 4 7 34 4 4 5 7 9 12 14 18 21 23 28 30 31 33 34 34 34 35 35 36 LCS_GDT F 35 F 35 4 7 34 4 4 5 7 9 12 13 18 20 23 28 30 31 33 34 34 34 35 35 36 LCS_GDT W 36 W 36 4 7 34 4 4 5 7 9 12 14 18 21 23 28 30 31 33 34 34 34 35 35 36 LCS_GDT I 37 I 37 4 7 34 4 4 5 6 8 12 12 18 21 23 28 30 31 33 34 34 34 35 35 36 LCS_GDT S 38 S 38 4 6 34 3 4 5 6 9 13 14 18 21 23 28 30 31 33 34 34 34 35 35 36 LCS_GDT S 39 S 39 4 6 34 3 4 4 7 9 10 14 16 19 23 28 30 31 33 34 34 34 35 35 36 LCS_GDT F 40 F 40 4 6 34 3 4 4 4 4 8 10 12 15 18 21 25 28 33 34 34 34 35 35 36 LCS_GDT I 41 I 41 3 5 16 3 3 3 4 5 6 8 9 10 11 13 23 24 25 27 29 32 34 35 36 LCS_GDT G 42 G 42 3 5 12 3 3 4 4 5 5 8 9 10 11 11 12 13 14 15 15 17 19 19 26 LCS_GDT R 43 R 43 3 5 12 3 3 4 4 5 6 8 9 10 11 12 12 13 14 15 15 17 19 19 20 LCS_GDT S 44 S 44 3 5 12 3 3 4 4 5 6 8 9 10 11 12 12 13 14 15 15 16 16 17 17 LCS_GDT K 45 K 45 0 5 12 0 1 4 4 5 5 7 8 10 11 12 12 13 14 15 15 16 16 16 17 LCS_AVERAGE LCS_A: 32.80 ( 11.47 18.65 68.29 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 8 10 10 11 13 13 14 18 21 23 28 30 31 33 34 34 34 35 35 36 GDT PERCENT_AT 18.18 22.73 22.73 25.00 29.55 29.55 31.82 40.91 47.73 52.27 63.64 68.18 70.45 75.00 77.27 77.27 77.27 79.55 79.55 81.82 GDT RMS_LOCAL 0.33 0.49 0.49 1.21 1.53 1.53 2.57 2.93 3.33 3.49 3.93 4.17 4.32 4.60 4.73 4.73 4.73 5.03 5.03 5.40 GDT RMS_ALL_AT 16.87 17.16 17.16 15.43 15.22 15.22 10.71 11.35 11.55 11.10 11.05 10.66 10.68 10.57 10.61 10.61 10.61 10.42 10.42 10.30 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 27 E 27 # possible swapping detected: F 35 F 35 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 22.823 0 0.030 0.038 24.388 0.000 0.000 - LGA V 3 V 3 19.708 0 0.134 1.132 22.422 0.000 0.000 16.480 LGA Q 4 Q 4 22.333 0 0.168 0.734 29.191 0.000 0.000 26.771 LGA G 5 G 5 20.113 0 0.582 0.582 21.402 0.000 0.000 - LGA P 6 P 6 15.744 0 0.659 0.673 17.571 0.000 0.000 16.987 LGA W 7 W 7 9.469 0 0.365 0.330 13.910 0.000 0.000 13.910 LGA V 8 V 8 8.691 0 0.028 0.994 10.705 0.000 0.000 8.495 LGA G 9 G 9 2.234 0 0.473 0.473 5.428 15.000 15.000 - LGA S 10 S 10 6.399 0 0.692 0.664 9.502 1.364 0.909 9.502 LGA S 11 S 11 5.930 0 0.526 0.701 7.625 0.000 0.000 7.625 LGA Y 12 Y 12 5.022 0 0.063 1.259 5.748 4.545 4.091 5.158 LGA V 13 V 13 2.352 0 0.640 1.416 4.002 25.000 29.610 3.150 LGA A 14 A 14 2.163 0 0.605 0.597 3.434 30.455 28.000 - LGA E 15 E 15 5.604 0 0.028 1.163 9.686 4.545 2.020 9.686 LGA T 16 T 16 6.079 0 0.103 0.155 7.442 0.000 0.000 5.694 LGA G 17 G 17 2.690 0 0.690 0.690 3.711 20.909 20.909 - LGA Q 18 Q 18 4.054 0 0.137 0.859 11.123 7.273 3.232 9.576 LGA N 19 N 19 3.451 0 0.161 0.836 7.056 14.091 17.273 2.116 LGA W 20 W 20 8.727 0 0.582 1.258 19.511 0.000 0.000 19.511 LGA A 21 A 21 8.494 0 0.050 0.052 9.473 0.000 0.000 - LGA S 22 S 22 5.933 0 0.065 0.066 6.912 3.182 2.121 6.036 LGA L 23 L 23 3.749 0 0.057 1.427 5.923 9.091 5.227 5.491 LGA A 24 A 24 5.945 0 0.036 0.034 7.415 0.000 0.000 - LGA A 25 A 25 4.339 0 0.037 0.040 4.946 18.182 14.909 - LGA N 26 N 26 1.083 0 0.027 0.130 2.932 45.455 46.818 2.330 LGA E 27 E 27 5.067 0 0.080 0.854 6.424 4.545 2.222 4.743 LGA L 28 L 28 5.018 0 0.234 0.245 7.888 3.636 1.818 7.614 LGA R 29 R 29 1.843 0 0.658 1.457 8.557 36.364 16.198 7.714 LGA V 30 V 30 3.467 0 0.196 1.169 6.816 44.545 25.455 6.816 LGA T 31 T 31 2.854 0 0.714 0.625 5.881 33.182 19.221 5.881 LGA E 32 E 32 3.742 0 0.078 0.766 10.168 27.727 12.323 10.168 LGA R 33 R 33 1.209 0 0.230 1.112 10.049 43.182 18.347 10.049 LGA P 34 P 34 2.706 0 0.163 0.533 3.201 34.545 39.481 2.383 LGA F 35 F 35 3.768 0 0.048 1.173 11.904 18.636 7.273 11.904 LGA W 36 W 36 2.835 0 0.146 1.126 5.338 17.273 20.260 3.905 LGA I 37 I 37 3.559 0 0.685 1.310 8.859 26.818 13.409 8.859 LGA S 38 S 38 2.602 0 0.092 0.106 6.212 24.545 16.667 6.212 LGA S 39 S 39 5.847 0 0.639 0.846 7.620 1.364 1.212 4.514 LGA F 40 F 40 9.665 0 0.611 0.845 13.284 0.000 0.000 8.731 LGA I 41 I 41 14.949 0 0.359 0.355 17.823 0.000 0.000 13.051 LGA G 42 G 42 20.122 0 0.686 0.686 22.479 0.000 0.000 - LGA R 43 R 43 22.454 0 0.145 0.941 24.043 0.000 0.000 21.437 LGA S 44 S 44 26.830 0 0.636 0.761 30.089 0.000 0.000 30.089 LGA K 45 K 45 29.181 0 0.052 0.786 32.493 0.000 0.000 32.222 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 9.667 9.590 10.291 11.715 8.727 4.208 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 18 2.93 41.477 36.380 0.595 LGA_LOCAL RMSD: 2.925 Number of atoms: 18 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 11.351 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 9.667 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.166914 * X + 0.872501 * Y + 0.459219 * Z + -2.728710 Y_new = 0.389021 * X + 0.486245 * Y + -0.782450 * Z + 15.018681 Z_new = -0.905982 * X + 0.048044 * Y + -0.420582 * Z + 9.997210 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.976104 1.133693 3.027854 [DEG: 113.2224 64.9558 173.4833 ] ZXZ: 0.530731 2.004883 -1.517817 [DEG: 30.4086 114.8713 -86.9645 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS085_2-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS085_2-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 18 2.93 36.380 9.67 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS085_2-D1 PFRMAT TS TARGET T0953s2 MODEL 2 PARENT N/A ATOM 21 N ALA 2 -1.830 16.915 6.935 1.00 0.00 ATOM 23 CA ALA 2 -0.982 17.863 6.353 1.00 0.00 ATOM 25 CB ALA 2 0.295 17.173 5.887 1.00 0.00 ATOM 29 C ALA 2 -1.628 18.604 5.198 1.00 0.00 ATOM 30 O ALA 2 -2.529 18.073 4.552 1.00 0.00 ATOM 31 N VAL 3 -1.137 19.860 4.946 1.00 0.00 ATOM 33 CA VAL 3 -1.490 20.613 3.743 1.00 0.00 ATOM 35 CB VAL 3 -1.083 22.104 3.735 1.00 0.00 ATOM 37 CG1 VAL 3 -1.765 22.850 4.882 1.00 0.00 ATOM 41 CG2 VAL 3 0.430 22.244 3.898 1.00 0.00 ATOM 45 C VAL 3 -0.650 19.801 2.613 1.00 0.00 ATOM 46 O VAL 3 0.349 19.160 2.930 1.00 0.00 ATOM 47 N GLN 4 -1.135 19.921 1.442 1.00 0.00 ATOM 49 CA GLN 4 -0.434 19.208 0.276 1.00 0.00 ATOM 51 CB GLN 4 -1.297 19.027 -0.975 1.00 0.00 ATOM 54 CG GLN 4 -2.438 18.039 -0.732 1.00 0.00 ATOM 57 CD GLN 4 -3.296 17.875 -1.982 1.00 0.00 ATOM 58 OE1 GLN 4 -2.803 17.517 -3.041 1.00 0.00 ATOM 59 NE2 GLN 4 -4.583 18.130 -1.882 1.00 0.00 ATOM 62 C GLN 4 0.732 20.135 -0.024 1.00 0.00 ATOM 63 O GLN 4 0.946 21.109 0.693 1.00 0.00 ATOM 64 N GLY 5 1.492 19.814 -1.121 1.00 0.00 ATOM 66 CA GLY 5 2.890 20.184 -1.370 1.00 0.00 ATOM 69 C GLY 5 3.018 21.657 -1.110 1.00 0.00 ATOM 70 O GLY 5 3.991 22.092 -0.496 1.00 0.00 ATOM 71 N PRO 6 2.078 22.585 -1.523 1.00 0.00 ATOM 72 CD PRO 6 2.436 22.973 -3.578 1.00 0.00 ATOM 75 CG PRO 6 1.019 23.469 -3.345 1.00 0.00 ATOM 78 CB PRO 6 1.102 24.491 -2.232 1.00 0.00 ATOM 81 CA PRO 6 2.193 23.979 -1.289 1.00 0.00 ATOM 83 C PRO 6 2.002 24.532 0.139 1.00 0.00 ATOM 84 O PRO 6 1.367 23.887 0.970 1.00 0.00 ATOM 85 N TRP 7 2.587 25.779 0.375 1.00 0.00 ATOM 87 CA TRP 7 2.463 26.506 1.551 1.00 0.00 ATOM 89 CB TRP 7 3.803 26.661 2.277 1.00 0.00 ATOM 92 CG TRP 7 4.327 25.344 2.776 1.00 0.00 ATOM 93 CD1 TRP 7 5.127 24.492 2.090 1.00 0.00 ATOM 95 NE1 TRP 7 5.400 23.392 2.870 1.00 0.00 ATOM 97 CE2 TRP 7 4.775 23.506 4.091 1.00 0.00 ATOM 98 CZ2 TRP 7 4.739 22.675 5.208 1.00 0.00 ATOM 100 CH2 TRP 7 4.002 23.079 6.313 1.00 0.00 ATOM 102 CZ3 TRP 7 3.315 24.295 6.297 1.00 0.00 ATOM 104 CE3 TRP 7 3.352 25.127 5.180 1.00 0.00 ATOM 106 CD2 TRP 7 4.090 24.734 4.056 1.00 0.00 ATOM 107 C TRP 7 1.936 27.791 1.218 1.00 0.00 ATOM 108 O TRP 7 2.448 28.453 0.317 1.00 0.00 ATOM 109 N VAL 8 0.848 28.347 1.888 1.00 0.00 ATOM 111 CA VAL 8 0.228 29.554 1.216 1.00 0.00 ATOM 113 CB VAL 8 -1.101 29.918 1.917 1.00 0.00 ATOM 115 CG1 VAL 8 -0.840 30.390 3.347 1.00 0.00 ATOM 119 CG2 VAL 8 -1.812 31.039 1.159 1.00 0.00 ATOM 123 C VAL 8 1.167 30.772 1.196 1.00 0.00 ATOM 124 O VAL 8 1.157 31.543 0.239 1.00 0.00 ATOM 125 N GLY 9 1.989 30.946 2.257 1.00 0.00 ATOM 127 CA GLY 9 2.933 32.056 2.355 1.00 0.00 ATOM 130 C GLY 9 2.187 33.421 2.451 1.00 0.00 ATOM 131 O GLY 9 2.632 34.409 1.870 1.00 0.00 ATOM 132 N SER 10 1.087 33.343 3.211 1.00 0.00 ATOM 134 CA SER 10 0.728 34.288 4.186 1.00 0.00 ATOM 136 CB SER 10 -0.572 35.027 3.862 1.00 0.00 ATOM 139 OG SER 10 -1.663 34.119 3.878 1.00 0.00 ATOM 141 C SER 10 0.574 33.529 5.430 1.00 0.00 ATOM 142 O SER 10 0.295 32.333 5.391 1.00 0.00 ATOM 143 N SER 11 0.718 34.088 6.631 1.00 0.00 ATOM 145 CA SER 11 1.490 33.642 7.765 1.00 0.00 ATOM 147 CB SER 11 2.180 34.828 8.440 1.00 0.00 ATOM 150 OG SER 11 1.209 35.728 8.953 1.00 0.00 ATOM 152 C SER 11 0.645 32.944 8.730 1.00 0.00 ATOM 153 O SER 11 0.380 33.468 9.810 1.00 0.00 ATOM 154 N TYR 12 0.186 31.798 8.474 1.00 0.00 ATOM 156 CA TYR 12 -0.507 31.108 9.623 1.00 0.00 ATOM 158 CB TYR 12 -2.018 30.929 9.441 1.00 0.00 ATOM 161 CG TYR 12 -2.744 32.256 9.354 1.00 0.00 ATOM 162 CD1 TYR 12 -2.975 32.858 8.115 1.00 0.00 ATOM 164 CE1 TYR 12 -3.645 34.080 8.037 1.00 0.00 ATOM 166 CZ TYR 12 -4.086 34.703 9.199 1.00 0.00 ATOM 167 OH TYR 12 -4.745 35.906 9.123 1.00 0.00 ATOM 169 CE2 TYR 12 -3.862 34.113 10.438 1.00 0.00 ATOM 171 CD2 TYR 12 -3.192 32.891 10.514 1.00 0.00 ATOM 173 C TYR 12 0.199 29.700 9.660 1.00 0.00 ATOM 174 O TYR 12 0.336 29.106 10.728 1.00 0.00 ATOM 175 N VAL 13 0.685 29.100 8.514 1.00 0.00 ATOM 177 CA VAL 13 1.435 27.953 8.772 1.00 0.00 ATOM 179 CB VAL 13 1.306 26.823 7.725 1.00 0.00 ATOM 181 CG1 VAL 13 -0.081 26.186 7.792 1.00 0.00 ATOM 185 CG2 VAL 13 1.516 27.376 6.317 1.00 0.00 ATOM 189 C VAL 13 2.805 28.484 8.775 1.00 0.00 ATOM 190 O VAL 13 3.140 29.329 7.948 1.00 0.00 ATOM 191 N ALA 14 3.666 27.973 9.743 1.00 0.00 ATOM 193 CA ALA 14 4.995 28.542 9.680 1.00 0.00 ATOM 195 CB ALA 14 5.119 29.776 10.565 1.00 0.00 ATOM 199 C ALA 14 6.022 27.444 10.132 1.00 0.00 ATOM 200 O ALA 14 5.628 26.429 10.705 1.00 0.00 ATOM 201 N GLU 15 7.233 27.667 9.881 1.00 0.00 ATOM 203 CA GLU 15 8.290 26.580 10.092 1.00 0.00 ATOM 205 CB GLU 15 9.675 27.132 9.741 1.00 0.00 ATOM 208 CG GLU 15 9.824 27.352 8.235 1.00 0.00 ATOM 211 CD GLU 15 11.190 27.945 7.904 1.00 0.00 ATOM 212 OE1 GLU 15 11.455 28.166 6.719 1.00 0.00 ATOM 213 OE2 GLU 15 11.963 28.174 8.841 1.00 0.00 ATOM 214 C GLU 15 8.287 26.052 11.487 1.00 0.00 ATOM 215 O GLU 15 8.517 24.862 11.695 1.00 0.00 ATOM 216 N THR 16 8.021 26.868 12.608 1.00 0.00 ATOM 218 CA THR 16 8.019 26.315 13.993 1.00 0.00 ATOM 220 CB THR 16 7.819 27.448 15.019 1.00 0.00 ATOM 222 CG2 THR 16 8.950 28.471 14.943 1.00 0.00 ATOM 226 OG1 THR 16 6.590 28.107 14.751 1.00 0.00 ATOM 228 C THR 16 6.948 25.256 14.187 1.00 0.00 ATOM 229 O THR 16 7.158 24.293 14.920 1.00 0.00 ATOM 230 N GLY 17 5.751 25.405 13.519 1.00 0.00 ATOM 232 CA GLY 17 4.415 24.829 13.930 1.00 0.00 ATOM 235 C GLY 17 3.477 25.213 12.855 1.00 0.00 ATOM 236 O GLY 17 3.635 26.269 12.247 1.00 0.00 ATOM 237 N GLN 18 2.407 24.432 12.495 1.00 0.00 ATOM 239 CA GLN 18 1.367 24.784 11.592 1.00 0.00 ATOM 241 CB GLN 18 1.130 23.578 10.681 1.00 0.00 ATOM 244 CG GLN 18 2.342 23.298 9.792 1.00 0.00 ATOM 247 CD GLN 18 2.089 22.102 8.880 1.00 0.00 ATOM 248 OE1 GLN 18 1.128 22.079 8.125 1.00 0.00 ATOM 249 NE2 GLN 18 2.938 21.098 8.934 1.00 0.00 ATOM 252 C GLN 18 0.113 25.219 12.180 1.00 0.00 ATOM 253 O GLN 18 -0.593 24.418 12.789 1.00 0.00 ATOM 254 N ASN 19 -0.204 26.448 12.021 1.00 0.00 ATOM 256 CA ASN 19 -1.399 27.214 12.555 1.00 0.00 ATOM 258 CB ASN 19 -2.724 26.449 12.481 1.00 0.00 ATOM 261 CG ASN 19 -3.032 26.015 11.051 1.00 0.00 ATOM 262 OD1 ASN 19 -2.437 26.506 10.102 1.00 0.00 ATOM 263 ND2 ASN 19 -3.958 25.095 10.877 1.00 0.00 ATOM 266 C ASN 19 -1.020 27.497 14.060 1.00 0.00 ATOM 267 O ASN 19 -1.769 28.165 14.769 1.00 0.00 ATOM 268 N TRP 20 0.135 26.976 14.460 1.00 0.00 ATOM 270 CA TRP 20 0.663 27.195 15.737 1.00 0.00 ATOM 272 CB TRP 20 1.927 26.379 16.025 1.00 0.00 ATOM 275 CG TRP 20 2.451 26.626 17.412 1.00 0.00 ATOM 276 CD1 TRP 20 2.026 26.012 18.545 1.00 0.00 ATOM 278 NE1 TRP 20 2.738 26.495 19.620 1.00 0.00 ATOM 280 CE2 TRP 20 3.648 27.441 19.204 1.00 0.00 ATOM 281 CZ2 TRP 20 4.582 28.209 19.892 1.00 0.00 ATOM 283 CH2 TRP 20 5.372 29.095 19.174 1.00 0.00 ATOM 285 CZ3 TRP 20 5.226 29.210 17.789 1.00 0.00 ATOM 287 CE3 TRP 20 4.288 28.441 17.100 1.00 0.00 ATOM 289 CD2 TRP 20 3.484 27.541 17.810 1.00 0.00 ATOM 290 C TRP 20 0.967 28.604 15.779 1.00 0.00 ATOM 291 O TRP 20 0.676 29.268 16.771 1.00 0.00 ATOM 292 N ALA 21 1.553 29.065 14.680 1.00 0.00 ATOM 294 CA ALA 21 2.105 30.373 14.645 1.00 0.00 ATOM 296 CB ALA 21 2.861 30.596 13.341 1.00 0.00 ATOM 300 C ALA 21 0.994 31.434 14.807 1.00 0.00 ATOM 301 O ALA 21 1.173 32.410 15.533 1.00 0.00 ATOM 302 N SER 22 -0.218 31.254 14.117 1.00 0.00 ATOM 304 CA SER 22 -1.318 32.150 14.185 1.00 0.00 ATOM 306 CB SER 22 -2.463 31.668 13.290 1.00 0.00 ATOM 309 OG SER 22 -2.963 30.428 13.767 1.00 0.00 ATOM 311 C SER 22 -1.780 32.282 15.541 1.00 0.00 ATOM 312 O SER 22 -1.982 33.397 16.018 1.00 0.00 ATOM 313 N LEU 23 -1.961 31.155 16.219 1.00 0.00 ATOM 315 CA LEU 23 -2.497 31.193 17.506 1.00 0.00 ATOM 317 CB LEU 23 -2.794 29.776 18.003 1.00 0.00 ATOM 320 CG LEU 23 -3.425 29.757 19.400 1.00 0.00 ATOM 322 CD1 LEU 23 -4.741 30.530 19.395 1.00 0.00 ATOM 326 CD2 LEU 23 -3.701 28.319 19.835 1.00 0.00 ATOM 330 C LEU 23 -1.539 31.893 18.465 1.00 0.00 ATOM 331 O LEU 23 -1.972 32.695 19.292 1.00 0.00 ATOM 332 N ALA 24 -0.264 31.591 18.338 1.00 0.00 ATOM 334 CA ALA 24 0.730 32.190 19.221 1.00 0.00 ATOM 336 CB ALA 24 2.101 31.585 18.942 1.00 0.00 ATOM 340 C ALA 24 0.780 33.647 19.074 1.00 0.00 ATOM 341 O ALA 24 0.856 34.365 20.068 1.00 0.00 ATOM 342 N ALA 25 0.729 34.097 17.826 1.00 0.00 ATOM 344 CA ALA 25 0.857 35.474 17.519 1.00 0.00 ATOM 346 CB ALA 25 0.886 35.640 16.005 1.00 0.00 ATOM 350 C ALA 25 -0.250 36.332 18.125 1.00 0.00 ATOM 351 O ALA 25 0.019 37.426 18.617 1.00 0.00 ATOM 352 N ASN 26 -1.534 35.846 18.106 1.00 0.00 ATOM 354 CA ASN 26 -2.666 36.609 18.623 1.00 0.00 ATOM 356 CB ASN 26 -3.975 35.882 18.296 1.00 0.00 ATOM 359 CG ASN 26 -4.309 35.986 16.812 1.00 0.00 ATOM 360 OD1 ASN 26 -3.922 36.934 16.144 1.00 0.00 ATOM 361 ND2 ASN 26 -5.028 35.021 16.277 1.00 0.00 ATOM 364 C ASN 26 -2.566 36.854 20.097 1.00 0.00 ATOM 365 O ASN 26 -2.818 37.965 20.555 1.00 0.00 ATOM 366 N GLU 27 -2.198 35.810 20.784 1.00 0.00 ATOM 368 CA GLU 27 -2.084 35.938 22.255 1.00 0.00 ATOM 370 CB GLU 27 -1.862 34.566 22.898 1.00 0.00 ATOM 373 CG GLU 27 -3.105 33.684 22.780 1.00 0.00 ATOM 376 CD GLU 27 -2.847 32.297 23.359 1.00 0.00 ATOM 377 OE1 GLU 27 -3.797 31.512 23.432 1.00 0.00 ATOM 378 OE2 GLU 27 -1.697 32.029 23.726 1.00 0.00 ATOM 379 C GLU 27 -0.947 36.884 22.631 1.00 0.00 ATOM 380 O GLU 27 -1.097 37.696 23.540 1.00 0.00 ATOM 381 N LEU 28 0.164 36.768 21.925 1.00 0.00 ATOM 383 CA LEU 28 1.319 37.616 22.204 1.00 0.00 ATOM 385 CB LEU 28 2.513 37.148 21.368 1.00 0.00 ATOM 388 CG LEU 28 2.999 35.747 21.760 1.00 0.00 ATOM 390 CD1 LEU 28 4.083 35.278 20.793 1.00 0.00 ATOM 394 CD2 LEU 28 3.577 35.765 23.174 1.00 0.00 ATOM 398 C LEU 28 1.027 39.133 21.922 1.00 0.00 ATOM 399 O LEU 28 1.454 39.996 22.686 1.00 0.00 ATOM 400 N ARG 29 0.307 39.384 20.842 1.00 0.00 ATOM 402 CA ARG 29 -0.040 40.774 20.494 1.00 0.00 ATOM 404 CB ARG 29 0.413 41.163 19.084 1.00 0.00 ATOM 407 CG ARG 29 -0.013 40.123 18.048 1.00 0.00 ATOM 410 CD ARG 29 0.537 40.480 16.667 1.00 0.00 ATOM 413 NE ARG 29 0.125 39.454 15.685 1.00 0.00 ATOM 415 CZ ARG 29 0.488 39.507 14.416 1.00 0.00 ATOM 416 NH1 ARG 29 0.100 38.572 13.573 1.00 0.00 ATOM 419 NH2 ARG 29 1.240 40.500 13.992 1.00 0.00 ATOM 422 C ARG 29 -1.602 40.878 20.604 1.00 0.00 ATOM 423 O ARG 29 -2.175 40.493 21.621 1.00 0.00 ATOM 424 N VAL 30 -2.228 41.404 19.515 1.00 0.00 ATOM 426 CA VAL 30 -3.592 41.635 19.477 1.00 0.00 ATOM 428 CB VAL 30 -3.965 43.134 19.500 1.00 0.00 ATOM 430 CG1 VAL 30 -3.471 43.788 20.789 1.00 0.00 ATOM 434 CG2 VAL 30 -3.329 43.858 18.314 1.00 0.00 ATOM 438 C VAL 30 -4.068 41.014 18.230 1.00 0.00 ATOM 439 O VAL 30 -3.293 40.841 17.292 1.00 0.00 ATOM 440 N THR 31 -5.368 40.653 18.140 1.00 0.00 ATOM 442 CA THR 31 -5.898 40.058 16.992 1.00 0.00 ATOM 444 CB THR 31 -7.261 39.401 17.281 1.00 0.00 ATOM 446 CG2 THR 31 -7.146 38.342 18.374 1.00 0.00 ATOM 450 OG1 THR 31 -8.178 40.399 17.708 1.00 0.00 ATOM 452 C THR 31 -6.046 41.044 15.939 1.00 0.00 ATOM 453 O THR 31 -6.015 42.243 16.209 1.00 0.00 ATOM 454 N GLU 32 -6.213 40.552 14.735 1.00 0.00 ATOM 456 CA GLU 32 -6.259 41.393 13.637 1.00 0.00 ATOM 458 CB GLU 32 -6.248 40.622 12.314 1.00 0.00 ATOM 461 CG GLU 32 -7.525 39.800 12.134 1.00 0.00 ATOM 464 CD GLU 32 -7.413 38.454 12.843 1.00 0.00 ATOM 465 OE1 GLU 32 -8.452 37.828 13.069 1.00 0.00 ATOM 466 OE2 GLU 32 -6.284 38.059 13.154 1.00 0.00 ATOM 467 C GLU 32 -7.564 42.240 13.751 1.00 0.00 ATOM 468 O GLU 32 -8.517 41.820 14.403 1.00 0.00 ATOM 469 N ARG 33 -7.514 43.418 13.077 1.00 0.00 ATOM 471 CA ARG 33 -8.561 44.398 12.988 1.00 0.00 ATOM 473 CB ARG 33 -8.501 45.512 14.037 1.00 0.00 ATOM 476 CG ARG 33 -8.685 44.965 15.452 1.00 0.00 ATOM 479 CD ARG 33 -8.610 46.092 16.482 1.00 0.00 ATOM 482 NE ARG 33 -8.590 45.522 17.846 1.00 0.00 ATOM 484 CZ ARG 33 -8.498 46.278 18.925 1.00 0.00 ATOM 485 NH1 ARG 33 -8.483 45.730 20.123 1.00 0.00 ATOM 488 NH2 ARG 33 -8.420 47.586 18.802 1.00 0.00 ATOM 491 C ARG 33 -8.335 44.938 11.689 1.00 0.00 ATOM 492 O ARG 33 -7.309 44.654 11.074 1.00 0.00 ATOM 493 N PRO 34 -9.264 45.783 11.127 1.00 0.00 ATOM 494 CD PRO 34 -11.220 45.401 10.254 1.00 0.00 ATOM 497 CG PRO 34 -11.215 46.915 10.133 1.00 0.00 ATOM 500 CB PRO 34 -9.963 47.277 9.363 1.00 0.00 ATOM 503 CA PRO 34 -8.918 46.237 9.775 1.00 0.00 ATOM 505 C PRO 34 -7.517 46.880 9.926 1.00 0.00 ATOM 506 O PRO 34 -7.339 47.789 10.733 1.00 0.00 ATOM 507 N PHE 35 -6.529 46.377 9.107 1.00 0.00 ATOM 509 CA PHE 35 -5.284 46.951 8.934 1.00 0.00 ATOM 511 CB PHE 35 -4.477 46.758 10.222 1.00 0.00 ATOM 514 CG PHE 35 -3.369 47.779 10.357 1.00 0.00 ATOM 515 CD1 PHE 35 -3.637 49.043 10.879 1.00 0.00 ATOM 517 CE1 PHE 35 -2.616 49.983 11.004 1.00 0.00 ATOM 519 CZ PHE 35 -1.323 49.661 10.605 1.00 0.00 ATOM 521 CE2 PHE 35 -1.050 48.402 10.085 1.00 0.00 ATOM 523 CD2 PHE 35 -2.073 47.462 9.961 1.00 0.00 ATOM 525 C PHE 35 -4.471 46.389 7.698 1.00 0.00 ATOM 526 O PHE 35 -4.751 45.290 7.224 1.00 0.00 ATOM 527 N TRP 36 -3.432 47.137 7.149 1.00 0.00 ATOM 529 CA TRP 36 -2.454 46.377 6.247 1.00 0.00 ATOM 531 CB TRP 36 -2.227 47.216 4.986 1.00 0.00 ATOM 534 CG TRP 36 -3.472 47.324 4.151 1.00 0.00 ATOM 535 CD1 TRP 36 -3.688 46.711 2.961 1.00 0.00 ATOM 537 NE1 TRP 36 -4.939 47.046 2.496 1.00 0.00 ATOM 539 CE2 TRP 36 -5.569 47.890 3.382 1.00 0.00 ATOM 540 CZ2 TRP 36 -6.821 48.499 3.371 1.00 0.00 ATOM 542 CH2 TRP 36 -7.172 49.315 4.437 1.00 0.00 ATOM 544 CZ3 TRP 36 -6.282 49.517 5.496 1.00 0.00 ATOM 546 CE3 TRP 36 -5.029 48.908 5.506 1.00 0.00 ATOM 548 CD2 TRP 36 -4.659 48.081 4.439 1.00 0.00 ATOM 549 C TRP 36 -1.176 46.031 6.852 1.00 0.00 ATOM 550 O TRP 36 -0.328 46.900 7.039 1.00 0.00 ATOM 551 N ILE 37 -1.050 44.672 7.161 1.00 0.00 ATOM 553 CA ILE 37 -0.019 44.062 8.023 1.00 0.00 ATOM 555 CB ILE 37 -0.500 43.730 9.452 1.00 0.00 ATOM 557 CG2 ILE 37 0.587 42.972 10.217 1.00 0.00 ATOM 561 CG1 ILE 37 -0.828 45.018 10.218 1.00 0.00 ATOM 564 CD1 ILE 37 -1.478 44.720 11.565 1.00 0.00 ATOM 568 C ILE 37 0.346 42.865 7.336 1.00 0.00 ATOM 569 O ILE 37 -0.157 42.601 6.245 1.00 0.00 ATOM 570 N SER 38 1.175 42.087 7.860 1.00 0.00 ATOM 572 CA SER 38 1.505 40.740 7.565 1.00 0.00 ATOM 574 CB SER 38 2.517 40.207 8.581 1.00 0.00 ATOM 577 OG SER 38 1.963 40.252 9.888 1.00 0.00 ATOM 579 C SER 38 0.271 39.863 7.558 1.00 0.00 ATOM 580 O SER 38 0.164 38.956 6.737 1.00 0.00 ATOM 581 N SER 39 -0.616 40.176 8.475 1.00 0.00 ATOM 583 CA SER 39 -2.019 39.960 8.498 1.00 0.00 ATOM 585 CB SER 39 -2.449 40.164 9.953 1.00 0.00 ATOM 588 OG SER 39 -1.843 39.183 10.782 1.00 0.00 ATOM 590 C SER 39 -2.931 40.792 7.557 1.00 0.00 ATOM 591 O SER 39 -2.687 41.979 7.352 1.00 0.00 ATOM 592 N PHE 40 -4.022 40.216 6.949 1.00 0.00 ATOM 594 CA PHE 40 -4.927 40.844 6.079 1.00 0.00 ATOM 596 CB PHE 40 -5.479 39.793 5.110 1.00 0.00 ATOM 599 CG PHE 40 -4.407 39.244 4.196 1.00 0.00 ATOM 600 CD1 PHE 40 -3.687 38.108 4.559 1.00 0.00 ATOM 602 CE1 PHE 40 -2.699 37.603 3.714 1.00 0.00 ATOM 604 CZ PHE 40 -2.428 38.234 2.506 1.00 0.00 ATOM 606 CE2 PHE 40 -3.142 39.367 2.140 1.00 0.00 ATOM 608 CD2 PHE 40 -4.131 39.872 2.984 1.00 0.00 ATOM 610 C PHE 40 -6.118 41.587 6.803 1.00 0.00 ATOM 611 O PHE 40 -6.913 40.952 7.493 1.00 0.00 ATOM 612 N ILE 41 -6.320 42.952 6.694 1.00 0.00 ATOM 614 CA ILE 41 -7.585 43.464 6.284 1.00 0.00 ATOM 616 CB ILE 41 -7.620 43.334 4.745 1.00 0.00 ATOM 618 CG2 ILE 41 -8.659 44.291 4.155 1.00 0.00 ATOM 622 CG1 ILE 41 -6.250 43.673 4.148 1.00 0.00 ATOM 625 CD1 ILE 41 -6.193 43.361 2.657 1.00 0.00 ATOM 629 C ILE 41 -8.907 42.856 6.914 1.00 0.00 ATOM 630 O ILE 41 -9.769 42.369 6.186 1.00 0.00 ATOM 631 N GLY 42 -9.147 42.849 8.203 1.00 0.00 ATOM 633 CA GLY 42 -10.330 42.112 8.654 1.00 0.00 ATOM 636 C GLY 42 -11.475 42.702 7.828 1.00 0.00 ATOM 637 O GLY 42 -11.537 43.916 7.639 1.00 0.00 ATOM 638 N ARG 43 -12.341 41.841 7.369 1.00 0.00 ATOM 640 CA ARG 43 -13.403 42.278 6.417 1.00 0.00 ATOM 642 CB ARG 43 -13.722 41.221 5.356 1.00 0.00 ATOM 645 CG ARG 43 -12.499 40.901 4.494 1.00 0.00 ATOM 648 CD ARG 43 -11.889 42.181 3.925 1.00 0.00 ATOM 651 NE ARG 43 -10.842 41.839 2.939 1.00 0.00 ATOM 653 CZ ARG 43 -10.176 42.763 2.269 1.00 0.00 ATOM 654 NH1 ARG 43 -9.250 42.416 1.397 1.00 0.00 ATOM 657 NH2 ARG 43 -10.440 44.037 2.471 1.00 0.00 ATOM 660 C ARG 43 -14.606 42.554 7.235 1.00 0.00 ATOM 661 O ARG 43 -15.152 41.644 7.855 1.00 0.00 ATOM 662 N SER 44 -14.951 43.800 7.181 1.00 0.00 ATOM 664 CA SER 44 -16.194 44.153 7.776 1.00 0.00 ATOM 666 CB SER 44 -16.357 45.674 7.768 1.00 0.00 ATOM 669 OG SER 44 -16.442 46.148 6.432 1.00 0.00 ATOM 671 C SER 44 -17.301 43.543 7.113 1.00 0.00 ATOM 672 O SER 44 -18.293 43.203 7.755 1.00 0.00 ATOM 673 N LYS 45 -17.118 43.396 5.781 1.00 0.00 ATOM 675 CA LYS 45 -18.020 42.941 4.806 1.00 0.00 ATOM 677 CB LYS 45 -17.426 43.095 3.404 1.00 0.00 ATOM 680 CG LYS 45 -17.369 44.561 2.974 1.00 0.00 ATOM 683 CD LYS 45 -16.786 44.691 1.566 1.00 0.00 ATOM 686 CE LYS 45 -16.652 46.160 1.170 1.00 0.00 ATOM 689 NZ LYS 45 -16.026 46.269 -0.174 1.00 0.00 ATOM 693 C LYS 45 -18.390 41.471 5.069 1.00 0.00 ATOM 694 O LYS 45 -17.688 40.780 5.802 1.00 0.00 TER END