####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS068_5-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS068_5-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 21 21 - 41 4.92 12.70 LCS_AVERAGE: 41.74 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 7 32 - 38 1.93 11.92 LONGEST_CONTINUOUS_SEGMENT: 7 38 - 44 1.90 17.51 LONGEST_CONTINUOUS_SEGMENT: 7 39 - 45 1.74 16.12 LCS_AVERAGE: 12.91 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 5 6 - 10 0.60 13.81 LCS_AVERAGE: 8.52 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 3 10 3 3 3 3 3 3 4 5 8 9 9 9 13 15 20 22 25 27 30 33 LCS_GDT V 3 V 3 3 5 10 3 3 4 4 5 5 5 5 8 9 9 9 9 9 9 11 15 15 15 25 LCS_GDT Q 4 Q 4 3 5 10 3 3 4 4 5 5 6 6 8 9 10 16 19 22 26 28 30 32 33 33 LCS_GDT G 5 G 5 3 5 17 2 3 4 4 5 5 6 6 8 11 11 18 22 25 27 28 30 32 33 33 LCS_GDT P 6 P 6 5 5 17 4 5 5 5 5 6 6 8 11 12 14 17 20 22 26 28 28 31 32 33 LCS_GDT W 7 W 7 5 5 17 4 5 5 5 7 8 9 12 13 16 18 21 24 25 27 28 30 32 33 33 LCS_GDT V 8 V 8 5 5 17 4 5 5 5 7 8 9 12 13 16 18 21 24 25 27 28 30 32 33 33 LCS_GDT G 9 G 9 5 5 17 4 5 5 6 8 9 10 12 13 16 18 21 24 25 27 28 30 32 33 33 LCS_GDT S 10 S 10 5 5 17 3 5 5 5 5 6 6 8 11 14 18 21 24 25 27 28 30 32 33 33 LCS_GDT S 11 S 11 3 3 17 3 3 4 4 4 5 5 8 11 12 14 16 20 21 27 28 30 32 33 33 LCS_GDT Y 12 Y 12 3 4 17 3 3 4 4 5 5 7 10 11 12 14 16 20 21 27 28 30 32 33 33 LCS_GDT V 13 V 13 3 6 17 3 3 4 4 6 6 8 10 11 12 14 16 20 21 23 25 30 31 33 33 LCS_GDT A 14 A 14 4 6 17 3 3 5 5 6 6 8 10 10 12 14 15 16 20 20 22 25 26 29 32 LCS_GDT E 15 E 15 4 6 17 3 4 5 5 6 6 8 10 10 12 14 15 19 20 20 22 25 26 27 29 LCS_GDT T 16 T 16 4 6 17 3 4 5 5 6 6 8 10 10 12 14 15 19 20 20 21 25 25 26 29 LCS_GDT G 17 G 17 4 6 17 3 4 5 5 6 6 8 10 11 12 14 15 19 20 20 23 25 26 29 32 LCS_GDT Q 18 Q 18 4 6 17 3 4 5 5 6 6 8 10 11 12 14 15 19 21 23 24 28 30 31 33 LCS_GDT N 19 N 19 4 6 17 3 4 4 4 5 6 7 10 11 12 14 15 20 21 27 28 30 32 33 33 LCS_GDT W 20 W 20 4 5 18 3 4 4 4 6 6 9 12 13 16 18 21 24 25 27 28 30 32 33 33 LCS_GDT A 21 A 21 4 4 21 3 4 4 5 7 8 9 12 13 16 18 21 24 25 27 28 30 32 33 33 LCS_GDT S 22 S 22 4 4 21 3 4 6 7 7 8 9 11 13 16 18 21 24 25 27 28 30 32 33 33 LCS_GDT L 23 L 23 3 3 21 3 4 4 5 6 8 9 11 13 15 18 21 24 25 26 28 30 32 33 33 LCS_GDT A 24 A 24 3 4 21 3 4 6 7 7 8 9 11 13 16 18 21 24 25 27 28 30 32 33 33 LCS_GDT A 25 A 25 3 5 21 3 4 4 4 6 6 7 11 12 15 18 21 24 25 27 28 30 32 33 33 LCS_GDT N 26 N 26 3 5 21 3 3 4 4 5 5 5 7 8 10 13 16 17 22 26 28 30 32 33 33 LCS_GDT E 27 E 27 3 6 21 3 3 4 4 6 7 8 10 11 13 15 16 20 21 26 28 30 32 33 33 LCS_GDT L 28 L 28 4 6 21 3 4 4 5 6 7 8 10 13 15 18 21 24 25 27 28 30 32 33 33 LCS_GDT R 29 R 29 4 6 21 3 4 4 5 6 7 8 10 13 16 18 21 24 25 27 28 30 32 33 33 LCS_GDT V 30 V 30 4 6 21 3 4 4 5 8 9 10 12 13 16 18 21 24 25 27 28 30 32 33 33 LCS_GDT T 31 T 31 4 6 21 3 4 4 6 8 9 10 12 13 16 18 21 24 25 27 28 30 32 33 33 LCS_GDT E 32 E 32 4 7 21 2 4 4 5 6 7 10 10 12 14 15 17 20 21 24 26 27 28 30 32 LCS_GDT R 33 R 33 3 7 21 2 3 4 6 8 9 10 12 13 16 18 21 24 25 27 28 30 32 33 33 LCS_GDT P 34 P 34 4 7 21 2 4 5 7 8 10 11 12 13 16 18 21 24 25 27 28 30 32 33 33 LCS_GDT F 35 F 35 4 7 21 3 4 6 7 8 10 11 12 13 16 18 21 24 25 27 28 30 32 33 33 LCS_GDT W 36 W 36 4 7 21 3 4 6 7 8 10 11 12 13 16 18 21 24 25 27 28 30 32 33 33 LCS_GDT I 37 I 37 4 7 21 3 4 6 7 8 10 11 12 13 16 18 21 24 25 27 28 30 32 33 33 LCS_GDT S 38 S 38 4 7 21 1 4 6 7 8 10 11 11 13 15 18 21 24 25 27 28 30 32 33 33 LCS_GDT S 39 S 39 4 7 21 4 4 5 5 8 10 11 11 13 16 18 21 24 25 27 28 30 32 33 33 LCS_GDT F 40 F 40 4 7 21 4 4 5 5 8 10 11 11 12 15 18 21 24 25 27 28 30 32 33 33 LCS_GDT I 41 I 41 4 7 21 4 4 5 5 8 10 11 11 12 15 18 21 24 25 27 28 30 32 33 33 LCS_GDT G 42 G 42 4 7 16 4 4 5 5 8 10 11 11 12 14 18 21 24 25 27 28 30 32 33 33 LCS_GDT R 43 R 43 3 7 16 3 3 4 5 7 8 10 11 12 13 13 16 17 21 26 28 30 32 33 33 LCS_GDT S 44 S 44 3 7 16 3 4 5 5 8 10 11 11 12 13 13 15 17 19 20 22 23 26 31 31 LCS_GDT K 45 K 45 3 7 16 0 3 3 5 8 10 11 11 12 13 13 14 17 19 20 20 21 23 31 31 LCS_AVERAGE LCS_A: 21.06 ( 8.52 12.91 41.74 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 5 6 7 8 10 11 12 13 16 18 21 24 25 27 28 30 32 33 33 GDT PERCENT_AT 9.09 11.36 13.64 15.91 18.18 22.73 25.00 27.27 29.55 36.36 40.91 47.73 54.55 56.82 61.36 63.64 68.18 72.73 75.00 75.00 GDT RMS_LOCAL 0.30 0.60 0.99 1.37 1.82 2.35 2.49 2.94 3.06 3.87 4.09 4.58 4.86 5.03 5.71 5.57 6.24 6.37 6.60 6.46 GDT RMS_ALL_AT 17.27 13.81 14.58 13.92 12.09 15.99 16.09 11.34 11.41 11.11 12.29 10.58 10.74 10.62 9.87 10.71 9.86 9.85 9.62 9.93 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 15 E 15 # possible swapping detected: E 27 E 27 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 20.668 0 0.621 0.605 22.179 0.000 0.000 - LGA V 3 V 3 19.879 0 0.604 0.611 23.124 0.000 0.000 21.059 LGA Q 4 Q 4 14.824 0 0.627 0.708 18.604 0.000 0.000 16.958 LGA G 5 G 5 9.608 0 0.047 0.047 11.608 0.000 0.000 - LGA P 6 P 6 7.677 0 0.711 0.596 8.256 0.455 0.260 6.236 LGA W 7 W 7 3.290 0 0.286 0.903 8.422 23.636 7.143 8.422 LGA V 8 V 8 2.480 0 0.069 0.112 5.336 41.364 24.416 5.077 LGA G 9 G 9 3.185 0 0.549 0.549 5.946 18.636 18.636 - LGA S 10 S 10 5.849 0 0.670 0.863 7.385 1.364 0.909 7.385 LGA S 11 S 11 9.882 0 0.604 0.533 12.584 0.000 0.000 12.584 LGA Y 12 Y 12 9.734 0 0.635 1.286 9.965 0.000 0.000 6.749 LGA V 13 V 13 11.927 0 0.618 0.635 14.644 0.000 0.000 14.644 LGA A 14 A 14 17.379 0 0.547 0.530 19.814 0.000 0.000 - LGA E 15 E 15 17.915 0 0.186 0.816 19.814 0.000 0.000 18.644 LGA T 16 T 16 17.735 0 0.057 0.072 18.128 0.000 0.000 15.419 LGA G 17 G 17 16.822 0 0.037 0.037 16.822 0.000 0.000 - LGA Q 18 Q 18 12.473 0 0.620 1.246 13.786 0.000 0.000 11.149 LGA N 19 N 19 9.042 0 0.604 1.186 12.188 0.000 0.000 11.003 LGA W 20 W 20 3.831 0 0.066 1.202 13.416 21.818 6.364 13.278 LGA A 21 A 21 3.097 0 0.574 0.528 5.539 22.273 17.818 - LGA S 22 S 22 6.471 0 0.613 0.721 7.687 0.455 0.303 7.171 LGA L 23 L 23 9.915 0 0.651 0.565 14.446 0.000 0.000 14.446 LGA A 24 A 24 7.489 0 0.608 0.569 9.085 0.000 0.000 - LGA A 25 A 25 10.345 0 0.573 0.578 11.318 0.000 0.000 - LGA N 26 N 26 15.304 0 0.617 0.562 21.852 0.000 0.000 18.915 LGA E 27 E 27 13.983 0 0.314 0.999 18.843 0.000 0.000 18.595 LGA L 28 L 28 8.724 0 0.607 1.401 10.015 0.000 0.000 6.932 LGA R 29 R 29 7.414 0 0.549 1.296 9.521 0.000 0.000 7.032 LGA V 30 V 30 3.715 0 0.080 0.213 4.586 34.091 22.597 4.550 LGA T 31 T 31 2.475 0 0.736 0.895 3.967 21.364 16.883 3.676 LGA E 32 E 32 5.745 0 0.619 1.141 12.097 1.818 0.808 11.881 LGA R 33 R 33 2.053 0 0.607 1.290 10.954 29.545 16.364 10.685 LGA P 34 P 34 1.702 0 0.067 0.344 5.563 39.545 24.935 5.563 LGA F 35 F 35 1.418 0 0.125 1.142 3.091 70.000 48.264 2.072 LGA W 36 W 36 2.563 0 0.025 0.189 9.583 45.455 13.766 9.583 LGA I 37 I 37 4.096 0 0.633 1.493 6.713 6.364 4.318 6.156 LGA S 38 S 38 4.520 0 0.135 0.651 5.364 3.182 2.727 4.572 LGA S 39 S 39 6.333 0 0.661 0.806 10.267 0.455 0.303 10.267 LGA F 40 F 40 10.439 0 0.042 1.050 13.944 0.000 0.000 13.608 LGA I 41 I 41 9.720 0 0.023 0.510 9.869 0.000 0.000 8.187 LGA G 42 G 42 12.079 0 0.659 0.659 16.667 0.000 0.000 - LGA R 43 R 43 17.721 0 0.093 1.461 22.195 0.000 0.000 22.195 LGA S 44 S 44 21.558 0 0.601 0.596 23.506 0.000 0.000 23.506 LGA K 45 K 45 21.100 0 0.653 1.074 23.189 0.000 0.000 22.140 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 9.026 8.813 9.756 8.678 5.155 1.506 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 12 2.94 29.545 25.517 0.395 LGA_LOCAL RMSD: 2.941 Number of atoms: 12 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 11.337 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 9.026 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.321561 * X + 0.736009 * Y + 0.595725 * Z + -19.724682 Y_new = -0.778717 * X + -0.563483 * Y + 0.275838 * Z + 146.280640 Z_new = 0.538701 * X + -0.375202 * Y + 0.754337 * Z + 18.202608 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.962406 -0.568894 -0.461560 [DEG: -112.4376 -32.5952 -26.4454 ] ZXZ: 2.004432 0.716152 2.179166 [DEG: 114.8455 41.0325 124.8570 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS068_5-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS068_5-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 12 2.94 25.517 9.03 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS068_5-D1 PFRMAT TS TARGET T0953s2 MODEL 5 PARENT 4PEU ATOM 1923 N ALA 2 6.462 29.846 -6.342 1.00 3.88 ATOM 1925 CA ALA 2 7.541 29.093 -5.744 1.00 3.88 ATOM 1926 CB ALA 2 7.389 27.575 -5.949 1.00 3.88 ATOM 1927 C ALA 2 8.870 29.501 -6.319 1.00 3.88 ATOM 1928 O ALA 2 9.862 29.565 -5.591 1.00 3.88 ATOM 1929 N VAL 3 8.892 29.818 -7.636 1.00 3.88 ATOM 1931 CA VAL 3 10.069 30.234 -8.367 1.00 3.88 ATOM 1932 CB VAL 3 9.786 30.321 -9.866 1.00 3.88 ATOM 1933 CG1 VAL 3 10.969 30.926 -10.653 1.00 3.88 ATOM 1934 CG2 VAL 3 9.409 28.917 -10.375 1.00 3.88 ATOM 1935 C VAL 3 10.528 31.575 -7.823 1.00 3.88 ATOM 1936 O VAL 3 11.731 31.784 -7.655 1.00 3.88 ATOM 1937 N GLN 4 9.571 32.479 -7.490 1.00 4.12 ATOM 1939 CA GLN 4 9.854 33.797 -6.966 1.00 4.12 ATOM 1940 CB GLN 4 8.585 34.642 -6.769 1.00 4.12 ATOM 1941 CG GLN 4 7.894 35.077 -8.061 1.00 4.12 ATOM 1942 CD GLN 4 6.617 35.807 -7.670 1.00 4.12 ATOM 1943 OE1 GLN 4 5.659 35.199 -7.192 1.00 4.12 ATOM 1944 NE2 GLN 4 6.595 37.151 -7.865 1.00 4.12 ATOM 1947 C GLN 4 10.501 33.697 -5.615 1.00 4.12 ATOM 1948 O GLN 4 11.429 34.460 -5.335 1.00 4.12 ATOM 1949 N GLY 5 10.039 32.753 -4.759 1.00 4.13 ATOM 1951 CA GLY 5 10.639 32.600 -3.463 1.00 4.13 ATOM 1952 C GLY 5 9.827 31.738 -2.534 1.00 4.13 ATOM 1953 O GLY 5 8.731 31.296 -2.890 1.00 4.13 ATOM 1954 N PRO 6 10.351 31.491 -1.330 1.00 3.95 ATOM 1955 CA PRO 6 9.705 30.703 -0.297 1.00 3.95 ATOM 1956 CB PRO 6 10.791 30.430 0.744 1.00 3.95 ATOM 1957 CG PRO 6 11.764 31.613 0.600 1.00 3.95 ATOM 1958 CD PRO 6 11.646 32.009 -0.879 1.00 3.95 ATOM 1959 C PRO 6 8.530 31.442 0.286 1.00 3.95 ATOM 1960 O PRO 6 8.446 32.658 0.092 1.00 3.95 ATOM 1961 N TRP 7 7.601 30.740 0.982 1.00 3.59 ATOM 1963 CA TRP 7 6.476 31.439 1.545 1.00 3.59 ATOM 1964 CB TRP 7 5.275 30.555 1.912 1.00 3.59 ATOM 1965 CG TRP 7 4.509 30.009 0.720 1.00 3.59 ATOM 1966 CD1 TRP 7 4.766 30.094 -0.624 1.00 3.59 ATOM 1967 NE1 TRP 7 3.777 29.461 -1.342 1.00 3.59 ATOM 1969 CE2 TRP 7 2.856 28.950 -0.456 1.00 3.59 ATOM 1970 CZ2 TRP 7 1.683 28.235 -0.660 1.00 3.59 ATOM 1971 CH2 TRP 7 0.943 27.849 0.465 1.00 3.59 ATOM 1972 CZ3 TRP 7 1.370 28.177 1.758 1.00 3.59 ATOM 1973 CE3 TRP 7 2.550 28.898 1.963 1.00 3.59 ATOM 1974 CD2 TRP 7 3.283 29.277 0.848 1.00 3.59 ATOM 1975 C TRP 7 6.895 32.288 2.702 1.00 3.59 ATOM 1976 O TRP 7 7.426 31.808 3.708 1.00 3.59 ATOM 1977 N VAL 8 6.674 33.608 2.517 1.00 3.47 ATOM 1979 CA VAL 8 7.024 34.599 3.497 1.00 3.47 ATOM 1980 CB VAL 8 7.797 35.770 2.881 1.00 3.47 ATOM 1981 CG1 VAL 8 8.088 36.877 3.920 1.00 3.47 ATOM 1982 CG2 VAL 8 9.096 35.248 2.237 1.00 3.47 ATOM 1983 C VAL 8 5.774 35.132 4.147 1.00 3.47 ATOM 1984 O VAL 8 5.774 35.329 5.364 1.00 3.47 ATOM 1985 N GLY 9 4.666 35.307 3.383 1.00 3.62 ATOM 1987 CA GLY 9 3.489 35.862 3.988 1.00 3.62 ATOM 1988 C GLY 9 2.228 35.195 3.588 1.00 3.62 ATOM 1989 O GLY 9 1.520 35.697 2.718 1.00 3.62 ATOM 1990 N SER 10 1.930 34.040 4.212 1.00 3.82 ATOM 1992 CA SER 10 0.713 33.341 3.923 1.00 3.82 ATOM 1993 CB SER 10 0.906 31.854 3.553 1.00 3.82 ATOM 1994 OG SER 10 -0.343 31.213 3.323 1.00 3.82 ATOM 1996 C SER 10 -0.135 33.466 5.160 1.00 3.82 ATOM 1997 O SER 10 0.353 33.357 6.290 1.00 3.82 ATOM 1998 N SER 11 -1.434 33.748 4.934 1.00 3.98 ATOM 2000 CA SER 11 -2.395 33.898 5.981 1.00 3.98 ATOM 2001 CB SER 11 -2.894 35.347 6.155 1.00 3.98 ATOM 2002 OG SER 11 -3.867 35.428 7.186 1.00 3.98 ATOM 2004 C SER 11 -3.570 33.014 5.680 1.00 3.98 ATOM 2005 O SER 11 -4.268 33.173 4.668 1.00 3.98 ATOM 2006 N TYR 12 -3.752 32.022 6.577 1.00 4.35 ATOM 2008 CA TYR 12 -4.820 31.071 6.539 1.00 4.35 ATOM 2009 CB TYR 12 -4.416 29.621 6.884 1.00 4.35 ATOM 2010 CG TYR 12 -3.632 28.968 5.805 1.00 4.35 ATOM 2011 CD1 TYR 12 -2.237 29.064 5.726 1.00 4.35 ATOM 2012 CE1 TYR 12 -1.549 28.413 4.696 1.00 4.35 ATOM 2013 CZ TYR 12 -2.255 27.656 3.756 1.00 4.35 ATOM 2014 OH TYR 12 -1.585 26.991 2.710 1.00 4.35 ATOM 2016 CE2 TYR 12 -3.642 27.546 3.842 1.00 4.35 ATOM 2017 CD2 TYR 12 -4.322 28.196 4.868 1.00 4.35 ATOM 2018 C TYR 12 -5.800 31.459 7.592 1.00 4.35 ATOM 2019 O TYR 12 -5.482 31.507 8.780 1.00 4.35 ATOM 2020 N VAL 13 -7.027 31.773 7.160 1.00 4.93 ATOM 2022 CA VAL 13 -8.071 32.135 8.065 1.00 4.93 ATOM 2023 CB VAL 13 -8.834 33.357 7.602 1.00 4.93 ATOM 2024 CG1 VAL 13 -9.975 33.706 8.583 1.00 4.93 ATOM 2025 CG2 VAL 13 -7.810 34.485 7.362 1.00 4.93 ATOM 2026 C VAL 13 -8.958 30.922 8.124 1.00 4.93 ATOM 2027 O VAL 13 -9.134 30.218 7.127 1.00 4.93 ATOM 2028 N ALA 14 -9.482 30.626 9.329 1.00 5.51 ATOM 2030 CA ALA 14 -10.406 29.555 9.575 1.00 5.51 ATOM 2031 CB ALA 14 -11.613 29.485 8.594 1.00 5.51 ATOM 2032 C ALA 14 -10.050 28.130 9.810 1.00 5.51 ATOM 2033 O ALA 14 -9.538 27.408 8.952 1.00 5.51 ATOM 2034 N GLU 15 -10.279 27.752 11.081 1.00 6.11 ATOM 2036 CA GLU 15 -10.216 26.406 11.584 1.00 6.11 ATOM 2037 CB GLU 15 -9.591 26.259 12.991 1.00 6.11 ATOM 2038 CG GLU 15 -8.097 26.605 13.111 1.00 6.11 ATOM 2039 CD GLU 15 -7.231 25.752 12.182 1.00 6.11 ATOM 2040 OE1 GLU 15 -7.399 24.504 12.156 1.00 6.11 ATOM 2041 OE2 GLU 15 -6.378 26.352 11.479 1.00 6.11 ATOM 2042 C GLU 15 -11.721 26.231 11.699 1.00 6.11 ATOM 2043 O GLU 15 -12.305 25.278 11.182 1.00 6.11 ATOM 2044 N THR 16 -12.357 27.220 12.391 1.00 6.45 ATOM 2046 CA THR 16 -13.763 27.390 12.621 1.00 6.45 ATOM 2047 CB THR 16 -14.091 27.408 14.099 1.00 6.45 ATOM 2048 CG2 THR 16 -13.763 26.048 14.739 1.00 6.45 ATOM 2049 OG1 THR 16 -13.371 28.446 14.752 1.00 6.45 ATOM 2051 C THR 16 -14.180 28.739 12.047 1.00 6.45 ATOM 2052 O THR 16 -15.374 28.995 11.898 1.00 6.45 ATOM 2053 N GLY 17 -13.201 29.599 11.656 1.00 6.36 ATOM 2055 CA GLY 17 -13.433 30.934 11.147 1.00 6.36 ATOM 2056 C GLY 17 -13.147 31.962 12.209 1.00 6.36 ATOM 2057 O GLY 17 -13.401 33.151 12.014 1.00 6.36 ATOM 2058 N GLN 18 -12.676 31.503 13.390 1.00 6.04 ATOM 2060 CA GLN 18 -12.326 32.341 14.504 1.00 6.04 ATOM 2061 CB GLN 18 -12.571 31.645 15.856 1.00 6.04 ATOM 2062 CG GLN 18 -14.024 31.292 16.158 1.00 6.04 ATOM 2063 CD GLN 18 -14.074 30.562 17.490 1.00 6.04 ATOM 2064 OE1 GLN 18 -13.811 29.363 17.571 1.00 6.04 ATOM 2065 NE2 GLN 18 -14.419 31.306 18.571 1.00 6.04 ATOM 2068 C GLN 18 -10.845 32.592 14.483 1.00 6.04 ATOM 2069 O GLN 18 -10.380 33.683 14.808 1.00 6.04 ATOM 2070 N ASN 19 -10.084 31.536 14.121 1.00 5.71 ATOM 2072 CA ASN 19 -8.652 31.530 14.076 1.00 5.71 ATOM 2073 CB ASN 19 -8.048 30.140 14.373 1.00 5.71 ATOM 2074 CG ASN 19 -8.326 29.779 15.829 1.00 5.71 ATOM 2075 OD1 ASN 19 -7.897 30.459 16.760 1.00 5.71 ATOM 2076 ND2 ASN 19 -9.094 28.679 16.036 1.00 5.71 ATOM 2079 C ASN 19 -7.997 32.062 12.848 1.00 5.71 ATOM 2080 O ASN 19 -8.568 32.099 11.755 1.00 5.71 ATOM 2081 N TRP 20 -6.750 32.517 13.075 1.00 5.54 ATOM 2083 CA TRP 20 -5.853 33.058 12.104 1.00 5.54 ATOM 2084 CB TRP 20 -5.602 34.565 12.299 1.00 5.54 ATOM 2085 CG TRP 20 -5.039 34.974 13.648 1.00 5.54 ATOM 2086 CD1 TRP 20 -3.741 35.130 14.052 1.00 5.54 ATOM 2087 NE1 TRP 20 -3.698 35.589 15.349 1.00 5.54 ATOM 2089 CE2 TRP 20 -4.990 35.727 15.809 1.00 5.54 ATOM 2090 CZ2 TRP 20 -5.490 36.158 17.031 1.00 5.54 ATOM 2091 CH2 TRP 20 -6.879 36.191 17.202 1.00 5.54 ATOM 2092 CZ3 TRP 20 -7.745 35.807 16.168 1.00 5.54 ATOM 2093 CE3 TRP 20 -7.238 35.383 14.933 1.00 5.54 ATOM 2094 CD2 TRP 20 -5.859 35.345 14.768 1.00 5.54 ATOM 2095 C TRP 20 -4.556 32.307 12.226 1.00 5.54 ATOM 2096 O TRP 20 -4.096 31.998 13.329 1.00 5.54 ATOM 2097 N ALA 21 -3.955 31.980 11.069 1.00 5.73 ATOM 2099 CA ALA 21 -2.707 31.279 11.021 1.00 5.73 ATOM 2100 CB ALA 21 -2.847 29.822 10.532 1.00 5.73 ATOM 2101 C ALA 21 -1.890 32.076 10.058 1.00 5.73 ATOM 2102 O ALA 21 -1.920 31.847 8.847 1.00 5.73 ATOM 2103 N SER 22 -1.196 33.094 10.603 1.00 6.50 ATOM 2105 CA SER 22 -0.366 33.959 9.819 1.00 6.50 ATOM 2106 CB SER 22 -0.628 35.450 10.063 1.00 6.50 ATOM 2107 OG SER 22 -1.926 35.791 9.603 1.00 6.50 ATOM 2109 C SER 22 1.071 33.709 10.111 1.00 6.50 ATOM 2110 O SER 22 1.456 33.463 11.257 1.00 6.50 ATOM 2111 N LEU 23 1.893 33.741 9.037 1.00 7.52 ATOM 2113 CA LEU 23 3.318 33.561 9.144 1.00 7.52 ATOM 2114 CB LEU 23 4.027 33.358 7.787 1.00 7.52 ATOM 2115 CG LEU 23 3.627 32.062 7.040 1.00 7.52 ATOM 2116 CD1 LEU 23 4.294 31.979 5.661 1.00 7.52 ATOM 2117 CD2 LEU 23 3.880 30.797 7.874 1.00 7.52 ATOM 2118 C LEU 23 3.879 34.785 9.820 1.00 7.52 ATOM 2119 O LEU 23 3.411 35.902 9.578 1.00 7.52 ATOM 2120 N ALA 24 4.863 34.590 10.734 1.00 8.03 ATOM 2122 CA ALA 24 5.463 35.697 11.434 1.00 8.03 ATOM 2123 CB ALA 24 6.271 35.275 12.675 1.00 8.03 ATOM 2124 C ALA 24 6.371 36.377 10.457 1.00 8.03 ATOM 2125 O ALA 24 7.404 35.836 10.048 1.00 8.03 ATOM 2126 N ALA 25 5.977 37.609 10.088 1.00 7.85 ATOM 2128 CA ALA 25 6.694 38.406 9.139 1.00 7.85 ATOM 2129 CB ALA 25 6.018 38.427 7.751 1.00 7.85 ATOM 2130 C ALA 25 6.813 39.812 9.637 1.00 7.85 ATOM 2131 O ALA 25 6.156 40.221 10.602 1.00 7.85 ATOM 2132 N ASN 26 7.681 40.584 8.939 1.00 6.93 ATOM 2134 CA ASN 26 7.989 41.956 9.236 1.00 6.93 ATOM 2135 CB ASN 26 9.014 42.534 8.232 1.00 6.93 ATOM 2136 CG ASN 26 10.395 41.900 8.414 1.00 6.93 ATOM 2137 OD1 ASN 26 10.792 41.437 9.484 1.00 6.93 ATOM 2138 ND2 ASN 26 11.148 41.819 7.287 1.00 6.93 ATOM 2141 C ASN 26 6.735 42.770 9.123 1.00 6.93 ATOM 2142 O ASN 26 6.054 42.773 8.097 1.00 6.93 ATOM 2143 N GLU 27 6.425 43.444 10.250 1.00 5.47 ATOM 2145 CA GLU 27 5.301 44.308 10.496 1.00 5.47 ATOM 2146 CB GLU 27 5.533 45.788 10.111 1.00 5.47 ATOM 2147 CG GLU 27 6.677 46.471 10.885 1.00 5.47 ATOM 2148 CD GLU 27 6.324 46.775 12.350 1.00 5.47 ATOM 2149 OE1 GLU 27 5.135 46.722 12.765 1.00 5.47 ATOM 2150 OE2 GLU 27 7.298 47.043 13.101 1.00 5.47 ATOM 2151 C GLU 27 3.940 43.791 10.100 1.00 5.47 ATOM 2152 O GLU 27 3.075 44.537 9.634 1.00 5.47 ATOM 2153 N LEU 28 3.749 42.461 10.262 1.00 4.34 ATOM 2155 CA LEU 28 2.484 41.829 10.013 1.00 4.34 ATOM 2156 CB LEU 28 2.582 40.455 9.305 1.00 4.34 ATOM 2157 CG LEU 28 1.242 39.715 9.068 1.00 4.34 ATOM 2158 CD1 LEU 28 0.310 40.467 8.111 1.00 4.34 ATOM 2159 CD2 LEU 28 1.485 38.283 8.581 1.00 4.34 ATOM 2160 C LEU 28 1.943 41.657 11.407 1.00 4.34 ATOM 2161 O LEU 28 2.612 41.084 12.272 1.00 4.34 ATOM 2162 N ARG 29 0.733 42.196 11.666 1.00 3.81 ATOM 2164 CA ARG 29 0.111 42.108 12.963 1.00 3.81 ATOM 2165 CB ARG 29 0.024 43.453 13.722 1.00 3.81 ATOM 2166 CG ARG 29 1.387 44.029 14.115 1.00 3.81 ATOM 2167 CD ARG 29 2.092 43.190 15.189 1.00 3.81 ATOM 2168 NE ARG 29 3.370 43.868 15.553 1.00 3.81 ATOM 2170 CZ ARG 29 4.540 43.623 14.883 1.00 3.81 ATOM 2171 NH1 ARG 29 4.632 42.692 13.882 1.00 3.81 ATOM 2174 NH2 ARG 29 5.650 44.329 15.242 1.00 3.81 ATOM 2177 C ARG 29 -1.277 41.608 12.793 1.00 3.81 ATOM 2178 O ARG 29 -1.943 41.939 11.812 1.00 3.81 ATOM 2179 N VAL 30 -1.736 40.751 13.733 1.00 3.69 ATOM 2181 CA VAL 30 -3.073 40.252 13.620 1.00 3.69 ATOM 2182 CB VAL 30 -3.187 38.766 13.358 1.00 3.69 ATOM 2183 CG1 VAL 30 -4.682 38.438 13.169 1.00 3.69 ATOM 2184 CG2 VAL 30 -2.253 38.306 12.224 1.00 3.69 ATOM 2185 C VAL 30 -3.693 40.525 14.964 1.00 3.69 ATOM 2186 O VAL 30 -3.138 40.178 16.010 1.00 3.69 ATOM 2187 N THR 31 -4.873 41.167 14.932 1.00 3.89 ATOM 2189 CA THR 31 -5.651 41.498 16.096 1.00 3.89 ATOM 2190 CB THR 31 -5.831 42.997 16.248 1.00 3.89 ATOM 2191 CG2 THR 31 -6.271 43.336 17.685 1.00 3.89 ATOM 2192 OG1 THR 31 -4.599 43.670 16.009 1.00 3.89 ATOM 2194 C THR 31 -6.976 40.779 15.852 1.00 3.89 ATOM 2195 O THR 31 -7.182 40.200 14.782 1.00 3.89 ATOM 2196 N GLU 32 -7.920 40.797 16.828 1.00 4.02 ATOM 2198 CA GLU 32 -9.203 40.127 16.735 1.00 4.02 ATOM 2199 CB GLU 32 -10.105 40.472 17.950 1.00 4.02 ATOM 2200 CG GLU 32 -11.484 39.782 18.000 1.00 4.02 ATOM 2201 CD GLU 32 -12.346 40.398 19.100 1.00 4.02 ATOM 2202 OE1 GLU 32 -13.446 40.908 18.757 1.00 4.02 ATOM 2203 OE2 GLU 32 -11.941 40.359 20.292 1.00 4.02 ATOM 2204 C GLU 32 -9.979 40.537 15.505 1.00 4.02 ATOM 2205 O GLU 32 -10.571 39.686 14.838 1.00 4.02 ATOM 2206 N ARG 33 -9.994 41.853 15.205 1.00 3.88 ATOM 2208 CA ARG 33 -10.706 42.365 14.072 1.00 3.88 ATOM 2209 CB ARG 33 -11.546 43.593 14.518 1.00 3.88 ATOM 2210 CG ARG 33 -12.556 43.152 15.585 1.00 3.88 ATOM 2211 CD ARG 33 -13.386 44.224 16.279 1.00 3.88 ATOM 2212 NE ARG 33 -14.080 43.490 17.381 1.00 3.88 ATOM 2214 CZ ARG 33 -14.983 44.078 18.222 1.00 3.88 ATOM 2215 NH1 ARG 33 -15.359 45.386 18.090 1.00 3.88 ATOM 2218 NH2 ARG 33 -15.505 43.317 19.226 1.00 3.88 ATOM 2221 C ARG 33 -9.782 42.593 12.876 1.00 3.88 ATOM 2222 O ARG 33 -10.118 42.059 11.816 1.00 3.88 ATOM 2223 N PRO 34 -8.667 43.345 12.922 1.00 3.69 ATOM 2224 CA PRO 34 -7.794 43.549 11.781 1.00 3.69 ATOM 2225 CB PRO 34 -7.175 44.929 11.978 1.00 3.69 ATOM 2226 CG PRO 34 -7.141 45.108 13.499 1.00 3.69 ATOM 2227 CD PRO 34 -8.322 44.273 14.001 1.00 3.69 ATOM 2228 C PRO 34 -6.749 42.497 11.499 1.00 3.69 ATOM 2229 O PRO 34 -6.290 41.820 12.420 1.00 3.69 ATOM 2230 N PHE 35 -6.338 42.386 10.216 1.00 3.48 ATOM 2232 CA PHE 35 -4.973 42.049 9.890 1.00 3.48 ATOM 2233 CB PHE 35 -4.788 41.058 8.731 1.00 3.48 ATOM 2234 CG PHE 35 -5.211 39.663 9.017 1.00 3.48 ATOM 2235 CD1 PHE 35 -6.539 39.254 8.868 1.00 3.48 ATOM 2236 CE1 PHE 35 -6.891 37.923 9.107 1.00 3.48 ATOM 2237 CZ PHE 35 -5.928 36.990 9.478 1.00 3.48 ATOM 2238 CE2 PHE 35 -4.603 37.392 9.595 1.00 3.48 ATOM 2239 CD2 PHE 35 -4.243 38.719 9.354 1.00 3.48 ATOM 2240 C PHE 35 -4.310 43.294 9.382 1.00 3.48 ATOM 2241 O PHE 35 -4.777 43.887 8.412 1.00 3.48 ATOM 2242 N TRP 36 -3.218 43.722 10.044 1.00 3.40 ATOM 2244 CA TRP 36 -2.454 44.884 9.665 1.00 3.40 ATOM 2245 CB TRP 36 -1.932 45.719 10.846 1.00 3.40 ATOM 2246 CG TRP 36 -2.956 46.494 11.627 1.00 3.40 ATOM 2247 CD1 TRP 36 -3.695 46.110 12.706 1.00 3.40 ATOM 2248 NE1 TRP 36 -4.478 47.155 13.142 1.00 3.40 ATOM 2250 CE2 TRP 36 -4.232 48.251 12.346 1.00 3.40 ATOM 2251 CZ2 TRP 36 -4.741 49.544 12.378 1.00 3.40 ATOM 2252 CH2 TRP 36 -4.284 50.458 11.420 1.00 3.40 ATOM 2253 CZ3 TRP 36 -3.333 50.081 10.459 1.00 3.40 ATOM 2254 CE3 TRP 36 -2.817 48.779 10.431 1.00 3.40 ATOM 2255 CD2 TRP 36 -3.279 47.873 11.380 1.00 3.40 ATOM 2256 C TRP 36 -1.227 44.455 8.926 1.00 3.40 ATOM 2257 O TRP 36 -0.464 43.620 9.413 1.00 3.40 ATOM 2258 N ILE 37 -1.028 45.013 7.714 1.00 3.43 ATOM 2260 CA ILE 37 0.125 44.710 6.913 1.00 3.43 ATOM 2261 CB ILE 37 -0.233 44.121 5.558 1.00 3.43 ATOM 2262 CG2 ILE 37 1.073 43.810 4.830 1.00 3.43 ATOM 2263 CG1 ILE 37 -1.075 42.832 5.679 1.00 3.43 ATOM 2264 CD1 ILE 37 -2.588 43.040 5.704 1.00 3.43 ATOM 2265 C ILE 37 0.836 46.033 6.756 1.00 3.43 ATOM 2266 O ILE 37 0.297 46.959 6.142 1.00 3.43 ATOM 2267 N SER 38 2.047 46.148 7.359 1.00 3.42 ATOM 2269 CA SER 38 2.804 47.367 7.276 1.00 3.42 ATOM 2270 CB SER 38 3.129 47.950 8.664 1.00 3.42 ATOM 2271 OG SER 38 1.934 48.199 9.392 1.00 3.42 ATOM 2273 C SER 38 4.083 47.270 6.488 1.00 3.42 ATOM 2274 O SER 38 4.330 48.138 5.652 1.00 3.42 ATOM 2275 N SER 39 4.941 46.241 6.726 1.00 3.41 ATOM 2277 CA SER 39 6.179 46.144 5.980 1.00 3.41 ATOM 2278 CB SER 39 7.375 45.544 6.742 1.00 3.41 ATOM 2279 OG SER 39 8.523 45.445 5.905 1.00 3.41 ATOM 2281 C SER 39 5.947 45.355 4.738 1.00 3.41 ATOM 2282 O SER 39 5.333 44.286 4.770 1.00 3.41 ATOM 2283 N PHE 40 6.416 45.919 3.605 1.00 3.78 ATOM 2285 CA PHE 40 6.258 45.286 2.319 1.00 3.78 ATOM 2286 CB PHE 40 5.538 46.210 1.308 1.00 3.78 ATOM 2287 CG PHE 40 4.294 46.740 1.937 1.00 3.78 ATOM 2288 CD1 PHE 40 4.237 48.121 2.160 1.00 3.78 ATOM 2289 CE1 PHE 40 3.127 48.698 2.770 1.00 3.78 ATOM 2290 CZ PHE 40 2.070 47.893 3.183 1.00 3.78 ATOM 2291 CE2 PHE 40 2.129 46.513 2.988 1.00 3.78 ATOM 2292 CD2 PHE 40 3.240 45.929 2.374 1.00 3.78 ATOM 2293 C PHE 40 7.624 45.063 1.709 1.00 3.78 ATOM 2294 O PHE 40 7.788 44.204 0.845 1.00 3.78 ATOM 2295 N ILE 41 8.636 45.831 2.186 1.00 4.29 ATOM 2297 CA ILE 41 10.004 45.860 1.726 1.00 4.29 ATOM 2298 CB ILE 41 10.823 46.937 2.458 1.00 4.29 ATOM 2299 CG2 ILE 41 12.344 46.803 2.211 1.00 4.29 ATOM 2300 CG1 ILE 41 10.362 48.352 2.039 1.00 4.29 ATOM 2301 CD1 ILE 41 9.089 48.877 2.703 1.00 4.29 ATOM 2302 C ILE 41 10.666 44.511 1.787 1.00 4.29 ATOM 2303 O ILE 41 10.599 43.803 2.794 1.00 4.29 ATOM 2304 N GLY 42 11.314 44.160 0.656 1.00 4.60 ATOM 2306 CA GLY 42 12.012 42.917 0.532 1.00 4.60 ATOM 2307 C GLY 42 11.877 42.386 -0.855 1.00 4.60 ATOM 2308 O GLY 42 11.752 43.135 -1.827 1.00 4.60 ATOM 2309 N ARG 43 11.927 41.039 -0.947 1.00 4.89 ATOM 2311 CA ARG 43 11.818 40.277 -2.167 1.00 4.89 ATOM 2312 CB ARG 43 12.288 38.810 -2.041 1.00 4.89 ATOM 2313 CG ARG 43 13.787 38.650 -1.784 1.00 4.89 ATOM 2314 CD ARG 43 14.323 37.227 -2.000 1.00 4.89 ATOM 2315 NE ARG 43 13.680 36.273 -1.040 1.00 4.89 ATOM 2317 CZ ARG 43 14.164 36.078 0.227 1.00 4.89 ATOM 2318 NH1 ARG 43 13.599 35.118 1.016 1.00 4.89 ATOM 2321 NH2 ARG 43 15.205 36.814 0.720 1.00 4.89 ATOM 2324 C ARG 43 10.395 40.264 -2.660 1.00 4.89 ATOM 2325 O ARG 43 9.498 40.810 -2.015 1.00 4.89 ATOM 2326 N SER 44 10.166 39.646 -3.850 1.00 4.67 ATOM 2328 CA SER 44 8.864 39.547 -4.467 1.00 4.67 ATOM 2329 CB SER 44 8.909 38.750 -5.777 1.00 4.67 ATOM 2330 OG SER 44 9.691 39.453 -6.733 1.00 4.67 ATOM 2332 C SER 44 7.909 38.862 -3.527 1.00 4.67 ATOM 2333 O SER 44 6.793 39.345 -3.343 1.00 4.67 ATOM 2334 N LYS 45 8.352 37.768 -2.860 1.00 4.10 ATOM 2336 CA LYS 45 7.538 37.073 -1.896 1.00 4.10 ATOM 2337 CB LYS 45 8.019 35.674 -1.508 1.00 4.10 ATOM 2338 CG LYS 45 7.560 34.595 -2.482 1.00 4.10 ATOM 2339 CD LYS 45 6.063 34.344 -2.272 1.00 4.10 ATOM 2340 CE LYS 45 5.461 33.173 -3.030 1.00 4.10 ATOM 2341 NZ LYS 45 4.047 33.043 -2.636 1.00 4.10 ATOM 2345 C LYS 45 7.241 37.859 -0.666 1.00 4.10 ATOM 2346 O LYS 45 6.170 37.683 -0.089 1.00 4.10 TER END