####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS058_3-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS058_3-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 25 13 - 37 4.80 10.97 LCS_AVERAGE: 49.07 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 19 - 27 1.93 13.61 LONGEST_CONTINUOUS_SEGMENT: 9 20 - 28 1.90 13.94 LONGEST_CONTINUOUS_SEGMENT: 9 29 - 37 1.95 11.26 LCS_AVERAGE: 16.79 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 7 20 - 26 0.59 15.49 LCS_AVERAGE: 11.11 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 6 9 3 4 5 5 5 6 6 6 6 8 9 12 16 17 19 21 23 24 26 30 LCS_GDT V 3 V 3 4 6 9 3 4 5 5 5 6 6 6 6 8 9 14 14 17 22 25 27 29 32 33 LCS_GDT Q 4 Q 4 4 6 14 3 4 5 5 5 6 6 6 9 10 13 16 18 20 23 25 27 29 32 33 LCS_GDT G 5 G 5 4 6 14 3 4 5 5 5 7 8 11 11 12 15 17 19 20 22 25 27 29 32 33 LCS_GDT P 6 P 6 4 6 14 3 4 5 8 8 8 10 11 12 14 16 17 19 20 21 24 26 28 32 33 LCS_GDT W 7 W 7 4 6 17 3 4 5 8 8 8 10 11 12 14 16 17 19 24 24 26 27 29 32 33 LCS_GDT V 8 V 8 3 5 17 3 3 5 8 9 11 11 13 16 20 22 24 24 27 28 28 30 31 33 33 LCS_GDT G 9 G 9 3 5 17 3 3 5 8 9 11 11 15 18 20 22 24 26 27 28 29 30 31 33 33 LCS_GDT S 10 S 10 3 5 17 1 3 5 8 9 11 11 15 18 20 22 24 26 27 28 29 30 31 33 33 LCS_GDT S 11 S 11 6 7 17 3 3 6 7 7 7 7 9 10 14 21 24 26 27 28 29 30 31 33 33 LCS_GDT Y 12 Y 12 6 7 17 3 5 6 7 7 7 7 7 10 12 16 16 18 20 25 29 30 31 33 33 LCS_GDT V 13 V 13 6 7 25 3 5 6 7 7 8 9 11 12 14 16 21 26 27 28 29 30 31 33 33 LCS_GDT A 14 A 14 6 7 25 4 5 6 8 8 9 11 13 14 16 20 24 26 27 28 29 30 31 33 33 LCS_GDT E 15 E 15 6 7 25 4 5 6 7 7 9 11 13 14 16 18 23 26 27 28 29 30 31 33 33 LCS_GDT T 16 T 16 6 7 25 4 5 6 7 7 7 8 10 12 14 17 20 23 25 26 29 30 31 33 33 LCS_GDT G 17 G 17 6 7 25 4 5 6 7 7 7 8 11 11 14 17 20 26 27 28 29 30 31 33 33 LCS_GDT Q 18 Q 18 4 4 25 3 3 4 4 5 9 11 13 16 19 22 24 26 27 28 29 30 31 33 33 LCS_GDT N 19 N 19 4 9 25 3 4 5 6 7 10 11 15 18 20 22 24 26 27 28 29 30 31 33 33 LCS_GDT W 20 W 20 7 9 25 4 7 7 8 8 10 10 15 18 20 22 24 26 27 28 29 30 31 33 33 LCS_GDT A 21 A 21 7 9 25 4 7 7 8 9 11 11 15 18 20 22 24 26 27 28 29 30 31 33 33 LCS_GDT S 22 S 22 7 9 25 4 7 7 8 8 10 10 11 14 17 18 23 25 27 28 29 30 31 33 33 LCS_GDT L 23 L 23 7 9 25 4 7 7 8 8 10 11 15 18 20 22 24 26 27 28 29 30 31 33 33 LCS_GDT A 24 A 24 7 9 25 4 7 7 8 8 10 11 15 18 20 22 24 26 27 28 29 30 31 33 33 LCS_GDT A 25 A 25 7 9 25 4 7 7 8 9 11 11 13 15 17 22 24 26 27 28 29 30 31 33 33 LCS_GDT N 26 N 26 7 9 25 4 7 7 8 9 11 11 15 18 20 22 24 26 27 28 29 30 31 33 33 LCS_GDT E 27 E 27 5 9 25 3 5 6 8 9 11 11 15 18 20 22 24 26 27 28 29 30 31 33 33 LCS_GDT L 28 L 28 4 9 25 3 3 6 6 9 11 11 15 18 20 22 24 26 27 28 29 30 31 33 33 LCS_GDT R 29 R 29 4 9 25 3 4 6 7 8 10 11 15 18 20 22 24 26 27 28 29 30 31 33 33 LCS_GDT V 30 V 30 4 9 25 3 4 6 7 8 10 11 15 18 20 22 24 26 27 28 29 30 31 33 33 LCS_GDT T 31 T 31 4 9 25 3 4 6 7 8 10 11 15 18 20 22 24 26 27 28 29 30 31 33 33 LCS_GDT E 32 E 32 4 9 25 3 4 6 7 8 10 11 15 18 20 22 24 26 27 28 29 30 31 33 33 LCS_GDT R 33 R 33 4 9 25 3 4 5 7 7 9 11 15 17 20 22 24 26 27 28 29 30 31 33 33 LCS_GDT P 34 P 34 3 9 25 2 3 5 6 8 10 11 14 18 20 22 24 26 27 28 29 30 31 33 33 LCS_GDT F 35 F 35 3 9 25 3 4 5 6 9 11 11 14 18 20 22 24 26 27 28 29 30 31 33 33 LCS_GDT W 36 W 36 6 9 25 3 4 6 8 9 11 11 14 18 20 22 24 26 27 28 29 30 31 33 33 LCS_GDT I 37 I 37 6 9 25 3 5 6 8 9 11 11 13 18 20 22 24 26 27 28 29 30 31 33 33 LCS_GDT S 38 S 38 6 7 22 4 5 6 7 7 10 11 12 13 17 18 20 22 24 26 28 30 31 33 33 LCS_GDT S 39 S 39 6 7 22 4 5 6 7 7 8 10 12 14 17 18 20 22 24 26 28 30 31 33 33 LCS_GDT F 40 F 40 6 7 21 4 5 6 7 7 8 9 11 14 17 18 20 22 24 26 28 30 31 33 33 LCS_GDT I 41 I 41 6 7 21 4 5 6 7 7 8 10 12 14 17 18 20 22 23 25 27 28 31 32 33 LCS_GDT G 42 G 42 3 7 20 3 3 4 4 7 8 9 10 11 13 15 18 19 20 21 23 26 27 28 30 LCS_GDT R 43 R 43 3 5 20 0 3 4 4 6 6 8 10 11 12 15 17 19 20 21 22 24 26 27 30 LCS_GDT S 44 S 44 3 5 20 0 3 4 4 5 5 8 9 10 12 15 17 19 20 21 23 26 28 29 31 LCS_GDT K 45 K 45 3 5 17 0 3 4 4 5 6 8 9 10 12 13 15 19 20 21 24 26 28 32 33 LCS_AVERAGE LCS_A: 25.65 ( 11.11 16.79 49.07 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 7 7 8 9 11 11 15 18 20 22 24 26 27 28 29 30 31 33 33 GDT PERCENT_AT 9.09 15.91 15.91 18.18 20.45 25.00 25.00 34.09 40.91 45.45 50.00 54.55 59.09 61.36 63.64 65.91 68.18 70.45 75.00 75.00 GDT RMS_LOCAL 0.26 0.59 0.59 1.11 1.74 2.07 2.07 3.01 3.59 3.76 4.02 4.45 4.94 5.01 5.11 5.35 5.47 5.78 6.07 6.07 GDT RMS_ALL_AT 13.95 15.49 15.49 15.22 9.92 10.02 10.02 11.04 10.62 10.62 10.42 10.34 10.47 10.52 10.42 10.68 10.56 10.88 10.63 10.63 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 13.107 0 0.281 0.369 14.254 0.000 0.000 - LGA V 3 V 3 11.194 0 0.046 0.053 11.500 0.000 0.000 11.240 LGA Q 4 Q 4 11.489 0 0.636 0.549 12.971 0.000 0.000 12.161 LGA G 5 G 5 13.022 0 0.025 0.025 16.291 0.000 0.000 - LGA P 6 P 6 14.604 0 0.697 0.591 17.906 0.000 0.000 17.906 LGA W 7 W 7 9.316 0 0.416 0.365 15.766 0.000 0.000 15.732 LGA V 8 V 8 5.606 0 0.571 1.404 6.777 11.364 6.494 6.040 LGA G 9 G 9 0.880 0 0.525 0.525 3.090 66.364 66.364 - LGA S 10 S 10 1.405 0 0.489 0.728 5.817 38.182 34.848 3.458 LGA S 11 S 11 8.585 0 0.595 0.782 12.199 0.000 0.000 12.199 LGA Y 12 Y 12 12.640 0 0.635 1.157 14.473 0.000 0.000 14.190 LGA V 13 V 13 11.731 0 0.051 0.065 12.247 0.000 0.000 11.930 LGA A 14 A 14 11.127 0 0.043 0.040 11.749 0.000 0.000 - LGA E 15 E 15 11.992 0 0.091 0.900 15.132 0.000 0.000 14.989 LGA T 16 T 16 13.165 0 0.188 1.160 14.032 0.000 0.000 13.060 LGA G 17 G 17 11.331 0 0.282 0.282 11.975 0.000 0.000 - LGA Q 18 Q 18 5.456 0 0.608 1.462 7.769 16.364 7.273 7.722 LGA N 19 N 19 2.793 0 0.082 1.123 7.321 22.727 11.364 7.321 LGA W 20 W 20 2.653 0 0.621 0.932 11.089 54.545 15.974 9.735 LGA A 21 A 21 4.819 0 0.067 0.065 7.259 7.273 5.818 - LGA S 22 S 22 7.585 0 0.039 0.638 9.703 0.000 0.000 9.624 LGA L 23 L 23 3.824 0 0.104 1.133 10.073 40.909 20.455 10.073 LGA A 24 A 24 3.297 0 0.031 0.042 5.641 26.364 21.455 - LGA A 25 A 25 7.131 0 0.022 0.025 8.706 0.000 0.000 - LGA N 26 N 26 4.794 0 0.598 0.901 7.894 3.636 1.818 7.690 LGA E 27 E 27 1.895 0 0.577 0.541 4.914 34.545 21.818 4.914 LGA L 28 L 28 3.869 0 0.656 0.970 10.044 25.909 12.955 8.700 LGA R 29 R 29 3.754 0 0.375 1.638 10.693 23.182 8.430 9.827 LGA V 30 V 30 1.735 0 0.098 0.127 2.863 47.727 38.961 2.598 LGA T 31 T 31 2.037 0 0.100 0.090 2.922 44.545 37.143 2.567 LGA E 32 E 32 2.025 0 0.602 1.364 6.143 33.182 23.838 6.143 LGA R 33 R 33 1.642 0 0.073 1.168 9.447 30.455 12.893 9.447 LGA P 34 P 34 6.077 0 0.492 0.565 7.753 1.364 1.558 6.447 LGA F 35 F 35 7.797 0 0.404 0.363 10.772 0.000 0.000 10.462 LGA W 36 W 36 8.426 0 0.591 1.288 9.735 0.000 0.000 7.591 LGA I 37 I 37 7.825 0 0.071 0.980 11.289 0.000 1.364 3.721 LGA S 38 S 38 15.170 0 0.071 0.642 18.015 0.000 0.000 16.572 LGA S 39 S 39 16.114 0 0.149 0.535 18.282 0.000 0.000 14.894 LGA F 40 F 40 15.201 0 0.086 1.062 18.897 0.000 0.000 11.686 LGA I 41 I 41 19.249 0 0.591 0.970 23.137 0.000 0.000 17.372 LGA G 42 G 42 25.073 0 0.441 0.441 26.025 0.000 0.000 - LGA R 43 R 43 22.784 0 0.632 1.114 29.376 0.000 0.000 27.644 LGA S 44 S 44 19.771 0 0.569 0.586 20.975 0.000 0.000 20.481 LGA K 45 K 45 18.823 0 0.237 0.743 22.588 0.000 0.000 9.692 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 9.075 9.041 9.874 12.014 7.973 2.442 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 15 3.01 33.523 29.695 0.482 LGA_LOCAL RMSD: 3.010 Number of atoms: 15 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 11.036 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 9.075 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.229488 * X + 0.920098 * Y + -0.317419 * Z + -14.836972 Y_new = -0.246252 * X + 0.260625 * Y + 0.933507 * Z + 16.193953 Z_new = 0.941645 * X + 0.292394 * Y + 0.166766 * Z + 35.308556 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.320972 -1.227484 1.052466 [DEG: -132.9819 -70.3296 60.3019 ] ZXZ: -2.813829 1.403248 1.269722 [DEG: -161.2205 80.4002 72.7497 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS058_3-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS058_3-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 15 3.01 29.695 9.08 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS058_3-D1 PFRMAT TS TARGET T0953s2 MODEL 3 PARENT N/A ATOM 12 N ALA 2 2.612 41.354 23.028 1.00 8.49 ATOM 13 CA ALA 2 3.084 40.082 23.489 1.00 8.49 ATOM 14 C ALA 2 4.126 39.660 22.509 1.00 8.49 ATOM 15 O ALA 2 5.085 40.386 22.244 1.00 8.49 ATOM 17 CB ALA 2 1.932 39.094 23.593 1.00 8.49 ATOM 18 N VAL 3 3.970 38.417 22.003 1.00 8.54 ATOM 19 CA VAL 3 4.852 37.863 21.017 1.00 8.54 ATOM 20 C VAL 3 4.220 38.060 19.674 1.00 8.54 ATOM 21 O VAL 3 3.027 37.828 19.499 1.00 8.54 ATOM 23 CB VAL 3 5.142 36.376 21.292 1.00 8.54 ATOM 24 CG1 VAL 3 6.024 35.794 20.199 1.00 8.54 ATOM 25 CG2 VAL 3 5.795 36.204 22.655 1.00 8.54 ATOM 26 N GLN 4 5.007 38.564 18.703 1.00 7.91 ATOM 27 CA GLN 4 4.548 38.785 17.360 1.00 7.91 ATOM 28 C GLN 4 4.394 37.506 16.576 1.00 7.91 ATOM 29 O GLN 4 3.448 37.369 15.806 1.00 7.91 ATOM 31 CB GLN 4 5.505 39.718 16.614 1.00 7.91 ATOM 32 CD GLN 4 6.507 42.027 16.411 1.00 7.91 ATOM 33 CG GLN 4 5.492 41.152 17.118 1.00 7.91 ATOM 34 OE1 GLN 4 7.518 41.538 15.906 1.00 7.91 ATOM 37 NE2 GLN 4 6.241 43.328 16.371 1.00 7.91 ATOM 38 N GLY 5 5.309 36.526 16.752 1.00 8.07 ATOM 39 CA GLY 5 5.328 35.350 15.908 1.00 8.07 ATOM 40 C GLY 5 4.141 34.482 16.195 1.00 8.07 ATOM 41 O GLY 5 3.456 34.719 17.188 1.00 8.07 ATOM 43 N PRO 6 3.811 33.479 15.396 1.00 7.98 ATOM 44 CA PRO 6 4.461 33.074 14.168 1.00 7.98 ATOM 45 C PRO 6 4.064 33.940 13.016 1.00 7.98 ATOM 46 O PRO 6 3.221 34.815 13.194 1.00 7.98 ATOM 47 CB PRO 6 3.995 31.632 13.962 1.00 7.98 ATOM 48 CD PRO 6 2.658 32.489 15.753 1.00 7.98 ATOM 49 CG PRO 6 2.622 31.596 14.545 1.00 7.98 ATOM 50 N TRP 7 4.683 33.719 11.836 1.00 7.76 ATOM 51 CA TRP 7 4.392 34.480 10.653 1.00 7.76 ATOM 52 C TRP 7 3.311 33.783 9.897 1.00 7.76 ATOM 53 O TRP 7 3.193 32.559 9.938 1.00 7.76 ATOM 55 CB TRP 7 5.652 34.650 9.802 1.00 7.76 ATOM 58 CG TRP 7 6.693 35.519 10.438 1.00 7.76 ATOM 59 CD1 TRP 7 7.714 35.117 11.249 1.00 7.76 ATOM 61 NE1 TRP 7 8.464 36.198 11.641 1.00 7.76 ATOM 62 CD2 TRP 7 6.814 36.943 10.317 1.00 7.76 ATOM 63 CE2 TRP 7 7.930 37.332 11.080 1.00 7.76 ATOM 64 CH2 TRP 7 7.609 39.600 10.508 1.00 7.76 ATOM 65 CZ2 TRP 7 8.337 38.661 11.184 1.00 7.76 ATOM 66 CE3 TRP 7 6.086 37.924 9.637 1.00 7.76 ATOM 67 CZ3 TRP 7 6.494 39.241 9.742 1.00 7.76 ATOM 68 N VAL 8 2.479 34.561 9.177 1.00 6.97 ATOM 69 CA VAL 8 1.441 33.932 8.421 1.00 6.97 ATOM 70 C VAL 8 1.894 33.791 6.996 1.00 6.97 ATOM 71 O VAL 8 1.731 34.697 6.181 1.00 6.97 ATOM 73 CB VAL 8 0.123 34.725 8.505 1.00 6.97 ATOM 74 CG1 VAL 8 -0.384 34.764 9.939 1.00 6.97 ATOM 75 CG2 VAL 8 0.314 36.134 7.965 1.00 6.97 ATOM 76 N GLY 9 2.465 32.620 6.643 1.00 7.32 ATOM 77 CA GLY 9 2.880 32.430 5.285 1.00 7.32 ATOM 78 C GLY 9 3.844 31.287 5.224 1.00 7.32 ATOM 79 O GLY 9 4.431 30.898 6.231 1.00 7.32 ATOM 81 N SER 10 4.021 30.723 4.007 1.00 8.50 ATOM 82 CA SER 10 4.910 29.617 3.786 1.00 8.50 ATOM 83 C SER 10 5.031 29.412 2.302 1.00 8.50 ATOM 84 O SER 10 5.397 30.331 1.566 1.00 8.50 ATOM 86 CB SER 10 4.393 28.364 4.494 1.00 8.50 ATOM 88 OG SER 10 5.317 27.295 4.378 1.00 8.50 ATOM 89 N SER 11 4.785 28.166 1.842 1.00 8.52 ATOM 90 CA SER 11 4.847 27.809 0.450 1.00 8.52 ATOM 91 C SER 11 3.548 28.202 -0.172 1.00 8.52 ATOM 92 O SER 11 2.642 28.639 0.518 1.00 8.52 ATOM 94 CB SER 11 5.130 26.313 0.292 1.00 8.52 ATOM 96 OG SER 11 4.030 25.538 0.735 1.00 8.52 ATOM 97 N TYR 12 3.387 28.076 -1.498 1.00 8.98 ATOM 98 CA TYR 12 2.133 28.507 -2.051 1.00 8.98 ATOM 99 C TYR 12 1.056 27.508 -1.777 1.00 8.98 ATOM 100 O TYR 12 1.243 26.298 -1.903 1.00 8.98 ATOM 102 CB TYR 12 2.264 28.741 -3.557 1.00 8.98 ATOM 103 CG TYR 12 3.115 29.937 -3.920 1.00 8.98 ATOM 105 OH TYR 12 5.470 33.215 -4.917 1.00 8.98 ATOM 106 CZ TYR 12 4.690 32.131 -4.587 1.00 8.98 ATOM 107 CD1 TYR 12 4.467 29.788 -4.201 1.00 8.98 ATOM 108 CE1 TYR 12 5.253 30.875 -4.533 1.00 8.98 ATOM 109 CD2 TYR 12 2.564 31.211 -3.979 1.00 8.98 ATOM 110 CE2 TYR 12 3.335 32.308 -4.309 1.00 8.98 ATOM 111 N VAL 13 -0.110 28.047 -1.378 1.00 8.17 ATOM 112 CA VAL 13 -1.323 27.363 -1.034 1.00 8.17 ATOM 113 C VAL 13 -1.161 26.790 0.340 1.00 8.17 ATOM 114 O VAL 13 -2.104 26.776 1.130 1.00 8.17 ATOM 116 CB VAL 13 -1.665 26.269 -2.063 1.00 8.17 ATOM 117 CG1 VAL 13 -2.858 25.451 -1.593 1.00 8.17 ATOM 118 CG2 VAL 13 -1.941 26.886 -3.425 1.00 8.17 ATOM 119 N ALA 14 0.062 26.346 0.680 1.00 7.78 ATOM 120 CA ALA 14 0.346 25.867 2.002 1.00 7.78 ATOM 121 C ALA 14 0.345 27.058 2.902 1.00 7.78 ATOM 122 O ALA 14 -0.102 26.999 4.046 1.00 7.78 ATOM 124 CB ALA 14 1.673 25.124 2.023 1.00 7.78 ATOM 125 N GLU 15 0.857 28.179 2.358 1.00 7.18 ATOM 126 CA GLU 15 1.074 29.418 3.047 1.00 7.18 ATOM 127 C GLU 15 -0.207 29.913 3.594 1.00 7.18 ATOM 128 O GLU 15 -0.301 30.245 4.774 1.00 7.18 ATOM 130 CB GLU 15 1.700 30.451 2.108 1.00 7.18 ATOM 131 CD GLU 15 2.647 32.774 1.814 1.00 7.18 ATOM 132 CG GLU 15 1.999 31.788 2.766 1.00 7.18 ATOM 133 OE1 GLU 15 2.843 32.419 0.633 1.00 7.18 ATOM 134 OE2 GLU 15 2.961 33.902 2.250 1.00 7.18 ATOM 135 N THR 16 -1.237 29.968 2.738 1.00 6.82 ATOM 136 CA THR 16 -2.454 30.554 3.184 1.00 6.82 ATOM 137 C THR 16 -3.090 29.732 4.260 1.00 6.82 ATOM 138 O THR 16 -3.444 30.259 5.309 1.00 6.82 ATOM 140 CB THR 16 -3.452 30.733 2.024 1.00 6.82 ATOM 142 OG1 THR 16 -2.892 31.612 1.041 1.00 6.82 ATOM 143 CG2 THR 16 -4.753 31.336 2.531 1.00 6.82 ATOM 144 N GLY 17 -3.242 28.413 4.039 1.00 6.80 ATOM 145 CA GLY 17 -4.000 27.609 4.955 1.00 6.80 ATOM 146 C GLY 17 -3.396 27.375 6.311 1.00 6.80 ATOM 147 O GLY 17 -4.043 27.622 7.325 1.00 6.80 ATOM 149 N GLN 18 -2.154 26.864 6.372 1.00 6.47 ATOM 150 CA GLN 18 -1.582 26.449 7.625 1.00 6.47 ATOM 151 C GLN 18 -1.199 27.579 8.530 1.00 6.47 ATOM 152 O GLN 18 -1.506 27.553 9.722 1.00 6.47 ATOM 154 CB GLN 18 -0.346 25.580 7.388 1.00 6.47 ATOM 155 CD GLN 18 -0.660 24.037 9.363 1.00 6.47 ATOM 156 CG GLN 18 0.265 25.009 8.658 1.00 6.47 ATOM 157 OE1 GLN 18 -1.117 23.060 8.771 1.00 6.47 ATOM 160 NE2 GLN 18 -0.938 24.303 10.634 1.00 6.47 ATOM 161 N ASN 19 -0.513 28.603 7.993 1.00 6.02 ATOM 162 CA ASN 19 0.001 29.662 8.815 1.00 6.02 ATOM 163 C ASN 19 -1.086 30.523 9.373 1.00 6.02 ATOM 164 O ASN 19 -1.098 30.820 10.568 1.00 6.02 ATOM 166 CB ASN 19 0.996 30.517 8.028 1.00 6.02 ATOM 167 CG ASN 19 2.316 29.812 7.795 1.00 6.02 ATOM 168 OD1 ASN 19 3.154 29.729 8.693 1.00 6.02 ATOM 171 ND2 ASN 19 2.506 29.298 6.585 1.00 6.02 ATOM 172 N TRP 20 -2.051 30.935 8.532 1.00 5.84 ATOM 173 CA TRP 20 -3.007 31.879 9.026 1.00 5.84 ATOM 174 C TRP 20 -3.849 31.267 10.099 1.00 5.84 ATOM 175 O TRP 20 -4.215 31.946 11.056 1.00 5.84 ATOM 177 CB TRP 20 -3.889 32.394 7.887 1.00 5.84 ATOM 180 CG TRP 20 -3.183 33.334 6.959 1.00 5.84 ATOM 181 CD1 TRP 20 -1.834 33.498 6.830 1.00 5.84 ATOM 183 NE1 TRP 20 -1.562 34.450 5.877 1.00 5.84 ATOM 184 CD2 TRP 20 -3.790 34.239 6.029 1.00 5.84 ATOM 185 CE2 TRP 20 -2.749 34.919 5.372 1.00 5.84 ATOM 186 CH2 TRP 20 -4.289 36.158 4.080 1.00 5.84 ATOM 187 CZ2 TRP 20 -2.987 35.883 4.393 1.00 5.84 ATOM 188 CE3 TRP 20 -5.112 34.540 5.689 1.00 5.84 ATOM 189 CZ3 TRP 20 -5.344 35.496 4.718 1.00 5.84 ATOM 190 N ALA 21 -4.214 29.980 9.953 1.00 5.36 ATOM 191 CA ALA 21 -5.053 29.332 10.920 1.00 5.36 ATOM 192 C ALA 21 -4.370 29.189 12.250 1.00 5.36 ATOM 193 O ALA 21 -4.958 29.484 13.289 1.00 5.36 ATOM 195 CB ALA 21 -5.485 27.964 10.415 1.00 5.36 ATOM 196 N SER 22 -3.107 28.722 12.249 1.00 5.41 ATOM 197 CA SER 22 -2.382 28.455 13.463 1.00 5.41 ATOM 198 C SER 22 -2.043 29.716 14.204 1.00 5.41 ATOM 199 O SER 22 -2.258 29.813 15.412 1.00 5.41 ATOM 201 CB SER 22 -1.100 27.676 13.161 1.00 5.41 ATOM 203 OG SER 22 -1.394 26.383 12.663 1.00 5.41 ATOM 204 N LEU 23 -1.493 30.716 13.490 1.00 6.55 ATOM 205 CA LEU 23 -1.017 31.923 14.116 1.00 6.55 ATOM 206 C LEU 23 -2.172 32.659 14.734 1.00 6.55 ATOM 207 O LEU 23 -2.145 33.000 15.913 1.00 6.55 ATOM 209 CB LEU 23 -0.291 32.803 13.098 1.00 6.55 ATOM 210 CG LEU 23 0.431 34.031 13.656 1.00 6.55 ATOM 211 CD1 LEU 23 1.472 34.539 12.670 1.00 6.55 ATOM 212 CD2 LEU 23 -0.562 35.133 13.991 1.00 6.55 ATOM 213 N ALA 24 -3.245 32.878 13.955 1.00 6.88 ATOM 214 CA ALA 24 -4.359 33.695 14.352 1.00 6.88 ATOM 215 C ALA 24 -5.061 33.143 15.555 1.00 6.88 ATOM 216 O ALA 24 -5.538 33.911 16.389 1.00 6.88 ATOM 218 CB ALA 24 -5.347 33.839 13.204 1.00 6.88 ATOM 219 N ALA 25 -5.218 31.808 15.641 1.00 6.08 ATOM 220 CA ALA 25 -5.976 31.235 16.720 1.00 6.08 ATOM 221 C ALA 25 -5.323 31.398 18.059 1.00 6.08 ATOM 222 O ALA 25 -5.976 31.840 19.002 1.00 6.08 ATOM 224 CB ALA 25 -6.220 29.755 16.468 1.00 6.08 ATOM 225 N ASN 26 -4.024 31.049 18.195 1.00 6.22 ATOM 226 CA ASN 26 -3.414 31.174 19.494 1.00 6.22 ATOM 227 C ASN 26 -2.091 31.857 19.352 1.00 6.22 ATOM 228 O ASN 26 -1.127 31.273 18.876 1.00 6.22 ATOM 230 CB ASN 26 -3.274 29.801 20.155 1.00 6.22 ATOM 231 CG ASN 26 -2.721 29.887 21.564 1.00 6.22 ATOM 232 OD1 ASN 26 -2.167 30.911 21.962 1.00 6.22 ATOM 235 ND2 ASN 26 -2.870 28.807 22.323 1.00 6.22 ATOM 236 N GLU 27 -2.004 33.108 19.829 1.00 6.96 ATOM 237 CA GLU 27 -0.851 33.964 19.764 1.00 6.96 ATOM 238 C GLU 27 -0.961 34.764 18.506 1.00 6.96 ATOM 239 O GLU 27 -0.603 34.300 17.429 1.00 6.96 ATOM 241 CB GLU 27 0.435 33.137 19.809 1.00 6.96 ATOM 242 CD GLU 27 0.891 33.307 22.287 1.00 6.96 ATOM 243 CG GLU 27 0.643 32.382 21.112 1.00 6.96 ATOM 244 OE1 GLU 27 1.294 34.466 22.056 1.00 6.96 ATOM 245 OE2 GLU 27 0.684 32.872 23.440 1.00 6.96 ATOM 246 N LEU 28 -1.433 36.021 18.625 1.00 7.70 ATOM 247 CA LEU 28 -1.645 36.874 17.482 1.00 7.70 ATOM 248 C LEU 28 -0.609 37.955 17.459 1.00 7.70 ATOM 249 O LEU 28 -0.057 38.322 18.494 1.00 7.70 ATOM 251 CB LEU 28 -3.054 37.472 17.513 1.00 7.70 ATOM 252 CG LEU 28 -4.198 36.529 17.134 1.00 7.70 ATOM 253 CD1 LEU 28 -4.390 35.460 18.199 1.00 7.70 ATOM 254 CD2 LEU 28 -5.489 37.308 16.926 1.00 7.70 ATOM 255 N ARG 29 -0.257 38.421 16.239 1.00 7.87 ATOM 256 CA ARG 29 0.664 39.512 16.053 1.00 7.87 ATOM 257 C ARG 29 0.050 40.870 16.295 1.00 7.87 ATOM 258 O ARG 29 0.665 41.716 16.946 1.00 7.87 ATOM 260 CB ARG 29 1.250 39.483 14.640 1.00 7.87 ATOM 261 CD ARG 29 2.939 40.381 13.015 1.00 7.87 ATOM 263 NE ARG 29 3.912 41.434 12.730 1.00 7.87 ATOM 264 CG ARG 29 2.286 40.563 14.377 1.00 7.87 ATOM 265 CZ ARG 29 4.606 41.522 11.601 1.00 7.87 ATOM 268 NH1 ARG 29 5.470 42.514 11.430 1.00 7.87 ATOM 271 NH2 ARG 29 4.437 40.618 10.646 1.00 7.87 ATOM 272 N VAL 30 -1.183 41.115 15.788 1.00 8.44 ATOM 273 CA VAL 30 -1.710 42.459 15.795 1.00 8.44 ATOM 274 C VAL 30 -2.842 42.601 16.767 1.00 8.44 ATOM 275 O VAL 30 -3.709 41.738 16.873 1.00 8.44 ATOM 277 CB VAL 30 -2.179 42.890 14.393 1.00 8.44 ATOM 278 CG1 VAL 30 -2.781 44.286 14.438 1.00 8.44 ATOM 279 CG2 VAL 30 -1.024 42.835 13.405 1.00 8.44 ATOM 280 N THR 31 -2.783 43.690 17.564 1.00 9.06 ATOM 281 CA THR 31 -3.763 44.113 18.526 1.00 9.06 ATOM 282 C THR 31 -4.911 44.853 17.889 1.00 9.06 ATOM 283 O THR 31 -6.044 44.774 18.362 1.00 9.06 ATOM 285 CB THR 31 -3.140 45.011 19.610 1.00 9.06 ATOM 287 OG1 THR 31 -2.576 46.179 19.001 1.00 9.06 ATOM 288 CG2 THR 31 -2.038 44.267 20.348 1.00 9.06 ATOM 289 N GLU 32 -4.646 45.610 16.804 1.00 9.53 ATOM 290 CA GLU 32 -5.638 46.491 16.249 1.00 9.53 ATOM 291 C GLU 32 -6.851 45.755 15.758 1.00 9.53 ATOM 292 O GLU 32 -7.974 46.157 16.061 1.00 9.53 ATOM 294 CB GLU 32 -5.045 47.311 15.101 1.00 9.53 ATOM 295 CD GLU 32 -5.386 49.114 13.366 1.00 9.53 ATOM 296 CG GLU 32 -6.017 48.298 14.477 1.00 9.53 ATOM 297 OE1 GLU 32 -4.194 48.891 13.069 1.00 9.53 ATOM 298 OE2 GLU 32 -6.084 49.977 12.792 1.00 9.53 ATOM 299 N ARG 33 -6.661 44.662 14.995 1.00 8.70 ATOM 300 CA ARG 33 -7.763 43.950 14.406 1.00 8.70 ATOM 301 C ARG 33 -8.279 42.933 15.377 1.00 8.70 ATOM 302 O ARG 33 -7.513 42.329 16.125 1.00 8.70 ATOM 304 CB ARG 33 -7.333 43.285 13.097 1.00 8.70 ATOM 305 CD ARG 33 -6.557 43.539 10.724 1.00 8.70 ATOM 307 NE ARG 33 -6.156 44.467 9.668 1.00 8.70 ATOM 308 CG ARG 33 -6.944 44.265 12.002 1.00 8.70 ATOM 309 CZ ARG 33 -5.820 44.097 8.437 1.00 8.70 ATOM 312 NH1 ARG 33 -5.470 45.011 7.542 1.00 8.70 ATOM 315 NH2 ARG 33 -5.837 42.814 8.103 1.00 8.70 ATOM 316 N PRO 34 -9.580 42.792 15.436 1.00 8.43 ATOM 317 CA PRO 34 -10.231 41.821 16.270 1.00 8.43 ATOM 318 C PRO 34 -9.822 40.403 15.979 1.00 8.43 ATOM 319 O PRO 34 -9.266 39.757 16.863 1.00 8.43 ATOM 320 CB PRO 34 -11.719 42.018 15.974 1.00 8.43 ATOM 321 CD PRO 34 -10.611 43.766 14.773 1.00 8.43 ATOM 322 CG PRO 34 -11.837 43.453 15.585 1.00 8.43 ATOM 323 N PHE 35 -10.096 39.889 14.758 1.00 7.84 ATOM 324 CA PHE 35 -9.697 38.555 14.402 1.00 7.84 ATOM 325 C PHE 35 -9.759 38.491 12.902 1.00 7.84 ATOM 326 O PHE 35 -10.516 37.694 12.352 1.00 7.84 ATOM 328 CB PHE 35 -10.606 37.526 15.076 1.00 7.84 ATOM 329 CG PHE 35 -12.048 37.630 14.669 1.00 7.84 ATOM 330 CZ PHE 35 -14.717 37.828 13.919 1.00 7.84 ATOM 331 CD1 PHE 35 -12.537 36.889 13.607 1.00 7.84 ATOM 332 CE1 PHE 35 -13.864 36.985 13.231 1.00 7.84 ATOM 333 CD2 PHE 35 -12.914 38.470 15.346 1.00 7.84 ATOM 334 CE2 PHE 35 -14.240 38.566 14.971 1.00 7.84 ATOM 335 N TRP 36 -8.975 39.326 12.194 1.00 7.93 ATOM 336 CA TRP 36 -9.058 39.345 10.760 1.00 7.93 ATOM 337 C TRP 36 -8.489 38.126 10.112 1.00 7.93 ATOM 338 O TRP 36 -9.156 37.505 9.286 1.00 7.93 ATOM 340 CB TRP 36 -8.347 40.578 10.199 1.00 7.93 ATOM 343 CG TRP 36 -8.408 40.678 8.706 1.00 7.93 ATOM 344 CD1 TRP 36 -9.398 41.254 7.963 1.00 7.93 ATOM 346 NE1 TRP 36 -9.106 41.153 6.624 1.00 7.93 ATOM 347 CD2 TRP 36 -7.437 40.187 7.772 1.00 7.93 ATOM 348 CE2 TRP 36 -7.906 40.501 6.483 1.00 7.93 ATOM 349 CH2 TRP 36 -6.011 39.507 5.484 1.00 7.93 ATOM 350 CZ2 TRP 36 -7.198 40.165 5.330 1.00 7.93 ATOM 351 CE3 TRP 36 -6.219 39.514 7.901 1.00 7.93 ATOM 352 CZ3 TRP 36 -5.522 39.182 6.755 1.00 7.93 ATOM 353 N ILE 37 -7.253 37.733 10.466 1.00 6.86 ATOM 354 CA ILE 37 -6.663 36.588 9.839 1.00 6.86 ATOM 355 C ILE 37 -7.477 35.389 10.192 1.00 6.86 ATOM 356 O ILE 37 -7.650 34.491 9.370 1.00 6.86 ATOM 358 CB ILE 37 -5.191 36.411 10.258 1.00 6.86 ATOM 359 CD1 ILE 37 -2.941 37.609 10.273 1.00 6.86 ATOM 360 CG1 ILE 37 -4.334 37.543 9.687 1.00 6.86 ATOM 361 CG2 ILE 37 -4.678 35.043 9.835 1.00 6.86 ATOM 362 N SER 38 -7.987 35.333 11.437 1.00 7.26 ATOM 363 CA SER 38 -8.788 34.213 11.833 1.00 7.26 ATOM 364 C SER 38 -10.056 34.226 11.031 1.00 7.26 ATOM 365 O SER 38 -10.623 33.176 10.740 1.00 7.26 ATOM 367 CB SER 38 -9.075 34.265 13.335 1.00 7.26 ATOM 369 OG SER 38 -7.886 34.101 14.088 1.00 7.26 ATOM 370 N SER 39 -10.542 35.425 10.655 1.00 7.20 ATOM 371 CA SER 39 -11.757 35.540 9.896 1.00 7.20 ATOM 372 C SER 39 -11.545 34.913 8.554 1.00 7.20 ATOM 373 O SER 39 -12.449 34.285 8.006 1.00 7.20 ATOM 375 CB SER 39 -12.173 37.007 9.768 1.00 7.20 ATOM 377 OG SER 39 -13.376 37.134 9.029 1.00 7.20 ATOM 378 N PHE 40 -10.332 35.068 7.983 1.00 6.78 ATOM 379 CA PHE 40 -10.068 34.533 6.678 1.00 6.78 ATOM 380 C PHE 40 -10.148 33.036 6.714 1.00 6.78 ATOM 381 O PHE 40 -10.741 32.422 5.828 1.00 6.78 ATOM 383 CB PHE 40 -8.696 34.990 6.180 1.00 6.78 ATOM 384 CG PHE 40 -8.349 34.483 4.809 1.00 6.78 ATOM 385 CZ PHE 40 -7.705 33.537 2.275 1.00 6.78 ATOM 386 CD1 PHE 40 -8.514 35.287 3.694 1.00 6.78 ATOM 387 CE1 PHE 40 -8.195 34.819 2.434 1.00 6.78 ATOM 388 CD2 PHE 40 -7.858 33.201 4.634 1.00 6.78 ATOM 389 CE2 PHE 40 -7.538 32.733 3.373 1.00 6.78 ATOM 390 N ILE 41 -9.543 32.412 7.743 1.00 5.89 ATOM 391 CA ILE 41 -9.517 30.981 7.877 1.00 5.89 ATOM 392 C ILE 41 -10.909 30.476 8.125 1.00 5.89 ATOM 393 O ILE 41 -11.306 29.460 7.558 1.00 5.89 ATOM 395 CB ILE 41 -8.567 30.537 9.005 1.00 5.89 ATOM 396 CD1 ILE 41 -6.598 30.353 7.397 1.00 5.89 ATOM 397 CG1 ILE 41 -7.129 30.947 8.684 1.00 5.89 ATOM 398 CG2 ILE 41 -8.690 29.041 9.247 1.00 5.89 ATOM 399 N GLY 42 -11.727 31.200 8.918 1.00 6.14 ATOM 400 CA GLY 42 -13.034 30.669 9.201 1.00 6.14 ATOM 401 C GLY 42 -13.088 30.028 10.566 1.00 6.14 ATOM 402 O GLY 42 -12.930 28.820 10.716 1.00 6.14 ATOM 404 N ARG 43 -13.271 30.890 11.594 1.00 6.26 ATOM 405 CA ARG 43 -13.518 30.612 12.992 1.00 6.26 ATOM 406 C ARG 43 -12.294 30.213 13.771 1.00 6.26 ATOM 407 O ARG 43 -12.197 30.546 14.952 1.00 6.26 ATOM 409 CB ARG 43 -14.564 29.505 13.142 1.00 6.26 ATOM 410 CD ARG 43 -16.922 28.728 12.772 1.00 6.26 ATOM 412 NE ARG 43 -18.227 29.036 12.194 1.00 6.26 ATOM 413 CG ARG 43 -15.922 29.852 12.554 1.00 6.26 ATOM 414 CZ ARG 43 -19.258 28.196 12.183 1.00 6.26 ATOM 417 NH1 ARG 43 -20.407 28.564 11.635 1.00 6.26 ATOM 420 NH2 ARG 43 -19.135 26.991 12.722 1.00 6.26 ATOM 421 N SER 44 -11.345 29.498 13.142 1.00 6.17 ATOM 422 CA SER 44 -10.086 29.078 13.708 1.00 6.17 ATOM 423 C SER 44 -10.285 28.015 14.748 1.00 6.17 ATOM 424 O SER 44 -9.714 26.928 14.654 1.00 6.17 ATOM 426 CB SER 44 -9.347 30.272 14.315 1.00 6.17 ATOM 428 OG SER 44 -9.065 31.252 13.331 1.00 6.17 ATOM 429 N LYS 45 -11.141 28.296 15.750 1.00 6.30 ATOM 430 CA LYS 45 -11.478 27.351 16.773 1.00 6.30 ATOM 431 C LYS 45 -12.971 27.412 16.807 1.00 6.30 ATOM 432 O LYS 45 -13.569 28.225 17.510 1.00 6.30 ATOM 434 CB LYS 45 -10.802 27.728 18.093 1.00 6.30 ATOM 435 CD LYS 45 -8.680 28.030 19.400 1.00 6.30 ATOM 436 CE LYS 45 -7.162 28.001 19.350 1.00 6.30 ATOM 437 CG LYS 45 -9.284 27.676 18.050 1.00 6.30 ATOM 441 NZ LYS 45 -6.557 28.322 20.672 1.00 6.30 TER END