####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS058_2-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS058_2-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 25 13 - 37 4.79 10.92 LONGEST_CONTINUOUS_SEGMENT: 25 14 - 38 5.00 10.89 LCS_AVERAGE: 49.23 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 19 - 27 1.93 13.55 LONGEST_CONTINUOUS_SEGMENT: 9 20 - 28 1.85 13.97 LONGEST_CONTINUOUS_SEGMENT: 9 29 - 37 1.95 11.19 LCS_AVERAGE: 16.79 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 7 20 - 26 0.57 15.50 LCS_AVERAGE: 11.21 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 6 9 3 4 5 5 6 6 6 6 6 7 9 12 12 17 19 22 23 25 27 28 LCS_GDT V 3 V 3 4 6 9 3 4 5 5 6 6 6 6 6 7 9 12 14 17 22 24 27 29 32 33 LCS_GDT Q 4 Q 4 4 6 14 3 4 5 5 6 6 6 6 7 10 13 18 18 20 23 25 28 30 32 33 LCS_GDT G 5 G 5 4 6 14 3 4 5 5 6 8 9 11 11 12 15 17 19 20 22 25 27 30 32 33 LCS_GDT P 6 P 6 4 6 14 3 4 5 8 8 10 10 11 13 15 15 17 19 20 21 23 26 28 32 33 LCS_GDT W 7 W 7 4 6 17 3 4 4 8 8 10 10 11 13 15 15 18 19 22 24 26 28 30 32 33 LCS_GDT V 8 V 8 3 5 17 3 3 4 8 8 11 11 13 15 20 22 23 25 28 28 28 30 32 33 33 LCS_GDT G 9 G 9 3 5 17 3 3 5 8 9 11 11 15 18 20 22 23 26 28 28 28 30 32 33 33 LCS_GDT S 10 S 10 3 5 17 1 3 5 8 9 11 11 15 18 20 22 23 26 28 28 28 30 32 33 33 LCS_GDT S 11 S 11 6 7 17 3 3 5 7 7 7 7 9 9 15 21 23 26 28 28 28 30 32 33 33 LCS_GDT Y 12 Y 12 6 7 17 3 3 6 7 7 7 7 7 7 12 15 16 17 19 22 28 30 32 33 33 LCS_GDT V 13 V 13 6 7 25 4 5 6 7 7 7 9 11 13 15 17 20 26 28 28 28 30 32 33 33 LCS_GDT A 14 A 14 6 7 25 4 5 6 8 8 10 11 13 15 16 21 23 26 28 28 28 30 32 33 33 LCS_GDT E 15 E 15 6 7 25 4 5 6 7 7 8 11 13 14 16 18 23 26 28 28 28 30 32 33 33 LCS_GDT T 16 T 16 6 7 25 4 5 6 7 7 7 7 9 13 15 17 20 22 25 27 28 30 32 33 33 LCS_GDT G 17 G 17 5 7 25 4 5 6 7 7 7 8 10 11 15 17 20 26 28 28 28 30 32 33 33 LCS_GDT Q 18 Q 18 4 4 25 3 4 4 4 5 8 11 13 16 20 22 23 26 28 28 28 30 32 33 33 LCS_GDT N 19 N 19 4 9 25 3 4 4 6 7 10 11 15 18 20 22 23 26 28 28 28 30 32 33 33 LCS_GDT W 20 W 20 7 9 25 4 7 7 8 8 10 10 15 18 20 22 23 26 28 28 28 30 32 33 33 LCS_GDT A 21 A 21 7 9 25 4 7 7 8 9 11 11 15 18 20 22 23 26 28 28 28 30 32 33 33 LCS_GDT S 22 S 22 7 9 25 5 7 7 8 8 10 10 11 15 17 18 23 25 28 28 28 30 32 33 33 LCS_GDT L 23 L 23 7 9 25 5 7 7 8 8 10 11 15 18 20 22 23 26 28 28 28 30 32 33 33 LCS_GDT A 24 A 24 7 9 25 5 7 7 8 8 10 11 15 18 20 22 23 26 28 28 28 30 32 33 33 LCS_GDT A 25 A 25 7 9 25 5 7 7 8 8 11 11 13 15 18 22 23 26 28 28 28 30 32 33 33 LCS_GDT N 26 N 26 7 9 25 5 7 7 8 9 11 11 15 18 20 22 23 26 28 28 28 30 32 33 33 LCS_GDT E 27 E 27 5 9 25 3 5 6 8 9 11 11 15 18 20 22 23 26 28 28 28 30 32 33 33 LCS_GDT L 28 L 28 4 9 25 3 3 5 7 9 11 11 15 18 20 22 23 26 28 28 28 30 32 33 33 LCS_GDT R 29 R 29 4 9 25 3 4 5 7 8 10 11 15 18 20 22 23 26 28 28 28 30 32 33 33 LCS_GDT V 30 V 30 4 9 25 3 4 5 7 8 10 11 15 18 20 22 23 26 28 28 28 30 32 33 33 LCS_GDT T 31 T 31 4 9 25 3 4 5 7 8 10 11 15 18 20 22 23 26 28 28 28 30 32 33 33 LCS_GDT E 32 E 32 4 9 25 3 4 5 7 8 10 11 15 18 20 22 23 26 28 28 28 30 32 33 33 LCS_GDT R 33 R 33 3 9 25 3 3 5 6 7 9 11 15 18 20 22 23 26 28 28 28 30 32 33 33 LCS_GDT P 34 P 34 3 9 25 3 3 5 6 8 10 11 15 18 20 22 23 26 28 28 28 30 32 33 33 LCS_GDT F 35 F 35 3 9 25 3 4 5 7 9 11 11 15 18 20 22 23 26 28 28 28 30 32 33 33 LCS_GDT W 36 W 36 6 9 25 3 5 6 8 9 11 11 15 18 20 22 23 26 28 28 28 30 32 33 33 LCS_GDT I 37 I 37 6 9 25 3 5 6 8 9 11 11 14 18 20 22 23 26 28 28 28 30 32 33 33 LCS_GDT S 38 S 38 6 7 25 4 5 6 6 7 10 11 12 14 16 18 20 22 24 26 28 30 31 33 33 LCS_GDT S 39 S 39 6 7 22 4 5 6 6 7 10 10 11 14 16 18 20 22 25 27 28 30 32 33 33 LCS_GDT F 40 F 40 6 7 21 4 5 6 6 7 8 9 11 14 16 18 20 22 25 27 28 30 32 33 33 LCS_GDT I 41 I 41 6 7 21 4 5 6 6 7 8 9 12 14 16 18 19 21 23 25 27 28 30 32 33 LCS_GDT G 42 G 42 4 7 20 3 3 4 4 7 7 9 10 11 12 15 18 19 21 22 24 26 27 29 30 LCS_GDT R 43 R 43 4 5 20 3 3 4 4 6 6 8 10 11 11 15 17 19 20 21 22 24 25 30 30 LCS_GDT S 44 S 44 4 5 20 0 3 4 4 5 6 8 9 11 12 15 17 19 20 21 23 24 28 30 30 LCS_GDT K 45 K 45 4 5 17 0 3 4 4 5 6 8 9 10 11 13 15 19 20 21 23 26 28 30 33 LCS_AVERAGE LCS_A: 25.74 ( 11.21 16.79 49.23 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 5 7 7 8 9 11 11 15 18 20 22 23 26 28 28 28 30 32 33 33 GDT PERCENT_AT 11.36 15.91 15.91 18.18 20.45 25.00 25.00 34.09 40.91 45.45 50.00 52.27 59.09 63.64 63.64 63.64 68.18 72.73 75.00 75.00 GDT RMS_LOCAL 0.37 0.57 0.57 1.11 1.75 2.06 2.06 3.00 3.55 3.70 3.96 4.08 4.90 5.07 5.07 5.07 5.46 5.90 6.04 6.04 GDT RMS_ALL_AT 15.13 15.50 15.50 15.22 10.07 9.99 9.99 11.01 10.57 10.60 10.39 10.44 10.43 10.38 10.38 10.38 10.52 10.58 10.59 10.59 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 27 E 27 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 13.269 0 0.296 0.386 14.399 0.000 0.000 - LGA V 3 V 3 11.311 0 0.048 0.063 11.532 0.000 0.000 11.381 LGA Q 4 Q 4 11.474 0 0.149 0.673 14.848 0.000 0.000 14.456 LGA G 5 G 5 12.933 0 0.096 0.096 16.244 0.000 0.000 - LGA P 6 P 6 14.507 0 0.699 0.592 17.818 0.000 0.000 17.814 LGA W 7 W 7 9.325 0 0.423 0.371 16.227 0.000 0.000 16.226 LGA V 8 V 8 5.639 0 0.581 0.587 8.639 11.364 6.494 5.901 LGA G 9 G 9 0.878 0 0.531 0.531 3.075 66.364 66.364 - LGA S 10 S 10 1.339 0 0.494 0.731 5.694 38.182 33.636 3.642 LGA S 11 S 11 8.545 0 0.579 0.778 12.165 0.000 0.000 12.165 LGA Y 12 Y 12 12.871 0 0.646 1.085 15.604 0.000 0.000 14.207 LGA V 13 V 13 11.639 0 0.077 0.095 12.112 0.000 0.000 11.753 LGA A 14 A 14 10.990 0 0.050 0.046 11.665 0.000 0.000 - LGA E 15 E 15 11.980 0 0.087 0.852 15.874 0.000 0.000 15.874 LGA T 16 T 16 13.372 0 0.209 1.166 14.375 0.000 0.000 13.294 LGA G 17 G 17 11.322 0 0.562 0.562 12.129 0.000 0.000 - LGA Q 18 Q 18 5.450 0 0.478 1.358 9.144 16.364 7.273 9.144 LGA N 19 N 19 2.760 0 0.077 1.122 7.273 25.455 12.727 7.273 LGA W 20 W 20 2.603 0 0.614 0.933 10.855 54.545 15.974 9.456 LGA A 21 A 21 4.829 0 0.066 0.064 7.281 7.273 5.818 - LGA S 22 S 22 7.512 0 0.042 0.053 9.619 0.000 0.000 9.160 LGA L 23 L 23 3.732 0 0.098 1.145 10.033 40.909 20.455 10.033 LGA A 24 A 24 3.320 0 0.033 0.042 5.656 26.364 21.455 - LGA A 25 A 25 7.060 0 0.015 0.021 8.596 0.000 0.000 - LGA N 26 N 26 4.698 0 0.406 0.659 8.952 10.000 5.000 8.952 LGA E 27 E 27 1.756 0 0.648 1.022 6.410 34.545 18.586 6.410 LGA L 28 L 28 3.910 0 0.647 1.418 9.809 25.909 12.955 6.664 LGA R 29 R 29 3.746 0 0.378 1.639 10.776 23.182 8.430 9.893 LGA V 30 V 30 1.781 0 0.102 0.129 2.924 47.727 38.961 2.738 LGA T 31 T 31 2.092 0 0.117 1.118 3.405 44.545 37.403 2.201 LGA E 32 E 32 2.175 0 0.601 1.363 6.270 33.182 22.222 6.270 LGA R 33 R 33 1.764 0 0.062 1.203 7.926 30.455 12.893 7.926 LGA P 34 P 34 5.901 0 0.502 0.563 7.658 1.364 1.558 6.221 LGA F 35 F 35 7.570 0 0.382 0.353 10.524 0.000 0.000 10.260 LGA W 36 W 36 8.058 0 0.595 1.290 9.406 0.000 0.000 7.339 LGA I 37 I 37 7.635 0 0.096 0.990 11.129 0.000 0.682 4.003 LGA S 38 S 38 15.030 0 0.084 0.646 17.856 0.000 0.000 16.408 LGA S 39 S 39 15.849 0 0.149 0.533 18.080 0.000 0.000 14.573 LGA F 40 F 40 14.996 0 0.108 1.055 18.827 0.000 0.000 9.596 LGA I 41 I 41 19.275 0 0.601 0.965 23.163 0.000 0.000 17.653 LGA G 42 G 42 24.891 0 0.460 0.460 26.086 0.000 0.000 - LGA R 43 R 43 22.717 0 0.344 1.608 27.885 0.000 0.000 25.416 LGA S 44 S 44 20.047 0 0.628 0.950 20.766 0.000 0.000 20.209 LGA K 45 K 45 18.838 0 0.228 0.742 22.242 0.000 0.000 9.316 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 9.082 9.055 9.841 12.221 7.929 2.338 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 15 3.00 32.955 29.655 0.484 LGA_LOCAL RMSD: 3.001 Number of atoms: 15 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 11.006 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 9.082 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.115213 * X + 0.157251 * Y + -0.980815 * Z + 2.557054 Y_new = -0.848585 * X + 0.528850 * Y + -0.014891 * Z + 34.836647 Z_new = 0.516362 * X + 0.834020 * Y + 0.194371 * Z + 17.725430 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.435851 -0.542597 1.341830 [DEG: -82.2682 -31.0885 76.8812 ] ZXZ: -1.555615 1.375180 0.554363 [DEG: -89.1302 78.7920 31.7626 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS058_2-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS058_2-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 15 3.00 29.655 9.08 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS058_2-D1 PFRMAT TS TARGET T0953s2 MODEL 2 PARENT N/A ATOM 12 N ALA 2 2.587 41.645 23.032 1.00 8.90 ATOM 13 CA ALA 2 3.083 40.417 23.567 1.00 8.90 ATOM 14 C ALA 2 4.140 40.006 22.606 1.00 8.90 ATOM 15 O ALA 2 5.107 40.732 22.375 1.00 8.90 ATOM 17 CB ALA 2 1.955 39.406 23.710 1.00 8.90 ATOM 18 N VAL 3 3.999 38.784 22.060 1.00 9.10 ATOM 19 CA VAL 3 4.955 38.333 21.098 1.00 9.10 ATOM 20 C VAL 3 4.332 38.342 19.743 1.00 9.10 ATOM 21 O VAL 3 3.171 37.978 19.572 1.00 9.10 ATOM 23 CB VAL 3 5.486 36.930 21.445 1.00 9.10 ATOM 24 CG1 VAL 3 6.445 36.442 20.370 1.00 9.10 ATOM 25 CG2 VAL 3 6.167 36.939 22.806 1.00 9.10 ATOM 26 N GLN 4 5.103 38.804 18.741 1.00 8.21 ATOM 27 CA GLN 4 4.634 38.769 17.392 1.00 8.21 ATOM 28 C GLN 4 5.389 37.665 16.717 1.00 8.21 ATOM 29 O GLN 4 6.598 37.741 16.492 1.00 8.21 ATOM 31 CB GLN 4 4.844 40.126 16.716 1.00 8.21 ATOM 32 CD GLN 4 4.291 42.590 16.655 1.00 8.21 ATOM 33 CG GLN 4 4.051 41.260 17.344 1.00 8.21 ATOM 34 OE1 GLN 4 4.219 42.686 15.430 1.00 8.21 ATOM 37 NE2 GLN 4 4.578 43.619 17.443 1.00 8.21 ATOM 38 N GLY 5 4.658 36.584 16.402 1.00 8.27 ATOM 39 CA GLY 5 5.157 35.398 15.770 1.00 8.27 ATOM 40 C GLY 5 4.085 34.392 16.048 1.00 8.27 ATOM 41 O GLY 5 3.416 34.558 17.066 1.00 8.27 ATOM 43 N PRO 6 3.810 33.362 15.282 1.00 8.10 ATOM 44 CA PRO 6 4.446 33.018 14.033 1.00 8.10 ATOM 45 C PRO 6 3.989 33.904 12.924 1.00 8.10 ATOM 46 O PRO 6 3.092 34.715 13.135 1.00 8.10 ATOM 47 CB PRO 6 4.029 31.566 13.793 1.00 8.10 ATOM 48 CD PRO 6 2.708 32.318 15.642 1.00 8.10 ATOM 49 CG PRO 6 2.674 31.460 14.408 1.00 8.10 ATOM 50 N TRP 7 4.615 33.779 11.737 1.00 7.85 ATOM 51 CA TRP 7 4.240 34.583 10.611 1.00 7.85 ATOM 52 C TRP 7 3.251 33.813 9.803 1.00 7.85 ATOM 53 O TRP 7 3.268 32.582 9.779 1.00 7.85 ATOM 55 CB TRP 7 5.473 34.960 9.787 1.00 7.85 ATOM 58 CG TRP 7 6.404 35.898 10.494 1.00 7.85 ATOM 59 CD1 TRP 7 7.464 35.559 11.285 1.00 7.85 ATOM 61 NE1 TRP 7 8.081 36.690 11.761 1.00 7.85 ATOM 62 CD2 TRP 7 6.357 37.330 10.476 1.00 7.85 ATOM 63 CE2 TRP 7 7.418 37.790 11.277 1.00 7.85 ATOM 64 CH2 TRP 7 6.834 40.041 10.866 1.00 7.85 ATOM 65 CZ2 TRP 7 7.667 39.146 11.479 1.00 7.85 ATOM 66 CE3 TRP 7 5.521 38.267 9.861 1.00 7.85 ATOM 67 CZ3 TRP 7 5.772 39.610 10.065 1.00 7.85 ATOM 68 N VAL 8 2.338 34.527 9.116 1.00 6.91 ATOM 69 CA VAL 8 1.379 33.804 8.342 1.00 6.91 ATOM 70 C VAL 8 1.869 33.698 6.932 1.00 6.91 ATOM 71 O VAL 8 1.711 34.606 6.119 1.00 6.91 ATOM 73 CB VAL 8 -0.007 34.475 8.393 1.00 6.91 ATOM 74 CG1 VAL 8 -1.005 33.698 7.547 1.00 6.91 ATOM 75 CG2 VAL 8 -0.493 34.584 9.829 1.00 6.91 ATOM 76 N GLY 9 2.478 32.548 6.595 1.00 7.40 ATOM 77 CA GLY 9 2.939 32.368 5.253 1.00 7.40 ATOM 78 C GLY 9 3.861 31.195 5.228 1.00 7.40 ATOM 79 O GLY 9 4.398 30.792 6.259 1.00 7.40 ATOM 81 N SER 10 4.069 30.623 4.024 1.00 8.49 ATOM 82 CA SER 10 4.935 29.489 3.885 1.00 8.49 ATOM 83 C SER 10 5.096 29.227 2.417 1.00 8.49 ATOM 84 O SER 10 5.493 30.109 1.653 1.00 8.49 ATOM 86 CB SER 10 4.359 28.281 4.626 1.00 8.49 ATOM 88 OG SER 10 5.258 27.186 4.592 1.00 8.49 ATOM 89 N SER 11 4.839 27.967 2.007 1.00 8.84 ATOM 90 CA SER 11 4.947 27.547 0.638 1.00 8.84 ATOM 91 C SER 11 3.648 27.836 -0.048 1.00 8.84 ATOM 92 O SER 11 2.708 28.327 0.565 1.00 8.84 ATOM 94 CB SER 11 5.306 26.062 0.560 1.00 8.84 ATOM 96 OG SER 11 4.232 25.253 1.007 1.00 8.84 ATOM 97 N TYR 12 3.554 27.550 -1.358 1.00 9.24 ATOM 98 CA TYR 12 2.350 27.844 -2.081 1.00 9.24 ATOM 99 C TYR 12 1.274 26.904 -1.636 1.00 9.24 ATOM 100 O TYR 12 1.487 25.698 -1.542 1.00 9.24 ATOM 102 CB TYR 12 2.591 27.737 -3.589 1.00 9.24 ATOM 103 CG TYR 12 1.376 28.064 -4.427 1.00 9.24 ATOM 105 OH TYR 12 -1.965 28.980 -6.727 1.00 9.24 ATOM 106 CZ TYR 12 -0.860 28.676 -5.966 1.00 9.24 ATOM 107 CD1 TYR 12 0.702 29.268 -4.263 1.00 9.24 ATOM 108 CE1 TYR 12 -0.409 29.576 -5.025 1.00 9.24 ATOM 109 CD2 TYR 12 0.908 27.169 -5.380 1.00 9.24 ATOM 110 CE2 TYR 12 -0.202 27.460 -6.151 1.00 9.24 ATOM 111 N VAL 13 0.100 27.499 -1.345 1.00 8.42 ATOM 112 CA VAL 13 -1.169 26.961 -0.929 1.00 8.42 ATOM 113 C VAL 13 -1.032 26.453 0.471 1.00 8.42 ATOM 114 O VAL 13 -1.983 26.482 1.251 1.00 8.42 ATOM 116 CB VAL 13 -1.651 25.849 -1.880 1.00 8.42 ATOM 117 CG1 VAL 13 -2.901 25.181 -1.330 1.00 8.42 ATOM 118 CG2 VAL 13 -1.910 26.413 -3.269 1.00 8.42 ATOM 119 N ALA 14 0.183 26.015 0.841 1.00 7.69 ATOM 120 CA ALA 14 0.439 25.599 2.187 1.00 7.69 ATOM 121 C ALA 14 0.407 26.836 3.014 1.00 7.69 ATOM 122 O ALA 14 -0.065 26.846 4.148 1.00 7.69 ATOM 124 CB ALA 14 1.770 24.868 2.271 1.00 7.69 ATOM 125 N GLU 15 0.931 27.926 2.428 1.00 7.52 ATOM 126 CA GLU 15 1.089 29.185 3.090 1.00 7.52 ATOM 127 C GLU 15 -0.234 29.710 3.518 1.00 7.52 ATOM 128 O GLU 15 -0.403 30.082 4.678 1.00 7.52 ATOM 130 CB GLU 15 1.794 30.187 2.174 1.00 7.52 ATOM 131 CD GLU 15 2.765 32.502 1.887 1.00 7.52 ATOM 132 CG GLU 15 2.037 31.545 2.811 1.00 7.52 ATOM 133 OE1 GLU 15 3.889 32.169 1.454 1.00 7.52 ATOM 134 OE2 GLU 15 2.212 33.583 1.595 1.00 7.52 ATOM 135 N THR 16 -1.216 29.744 2.602 1.00 6.88 ATOM 136 CA THR 16 -2.465 30.344 2.956 1.00 6.88 ATOM 137 C THR 16 -3.131 29.568 4.044 1.00 6.88 ATOM 138 O THR 16 -3.476 30.138 5.074 1.00 6.88 ATOM 140 CB THR 16 -3.407 30.445 1.742 1.00 6.88 ATOM 142 OG1 THR 16 -2.815 31.286 0.743 1.00 6.88 ATOM 143 CG2 THR 16 -4.744 31.045 2.152 1.00 6.88 ATOM 144 N GLY 17 -3.293 28.243 3.883 1.00 6.83 ATOM 145 CA GLY 17 -3.940 27.488 4.914 1.00 6.83 ATOM 146 C GLY 17 -2.856 26.717 5.576 1.00 6.83 ATOM 147 O GLY 17 -2.244 25.843 4.969 1.00 6.83 ATOM 149 N GLN 18 -2.607 27.040 6.855 1.00 6.56 ATOM 150 CA GLN 18 -1.555 26.456 7.626 1.00 6.56 ATOM 151 C GLN 18 -1.214 27.519 8.605 1.00 6.56 ATOM 152 O GLN 18 -1.612 27.477 9.766 1.00 6.56 ATOM 154 CB GLN 18 -0.393 26.044 6.721 1.00 6.56 ATOM 155 CD GLN 18 0.310 23.991 8.012 1.00 6.56 ATOM 156 CG GLN 18 0.737 25.331 7.446 1.00 6.56 ATOM 157 OE1 GLN 18 -0.202 23.136 7.290 1.00 6.56 ATOM 160 NE2 GLN 18 0.523 23.803 9.310 1.00 6.56 ATOM 161 N ASN 19 -0.440 28.502 8.114 1.00 5.89 ATOM 162 CA ASN 19 0.030 29.597 8.904 1.00 5.89 ATOM 163 C ASN 19 -1.100 30.480 9.356 1.00 5.89 ATOM 164 O ASN 19 -1.152 30.856 10.526 1.00 5.89 ATOM 166 CB ASN 19 1.064 30.413 8.126 1.00 5.89 ATOM 167 CG ASN 19 2.395 29.699 8.002 1.00 5.89 ATOM 168 OD1 ASN 19 3.188 29.675 8.943 1.00 5.89 ATOM 171 ND2 ASN 19 2.645 29.115 6.836 1.00 5.89 ATOM 172 N TRP 20 -2.056 30.829 8.469 1.00 5.86 ATOM 173 CA TRP 20 -3.045 31.783 8.896 1.00 5.86 ATOM 174 C TRP 20 -3.888 31.223 10.000 1.00 5.86 ATOM 175 O TRP 20 -4.221 31.938 10.944 1.00 5.86 ATOM 177 CB TRP 20 -3.928 32.202 7.719 1.00 5.86 ATOM 180 CG TRP 20 -3.236 33.100 6.740 1.00 5.86 ATOM 181 CD1 TRP 20 -1.889 33.290 6.612 1.00 5.86 ATOM 183 NE1 TRP 20 -1.631 34.186 5.603 1.00 5.86 ATOM 184 CD2 TRP 20 -3.854 33.929 5.749 1.00 5.86 ATOM 185 CE2 TRP 20 -2.824 34.592 5.059 1.00 5.86 ATOM 186 CH2 TRP 20 -4.380 35.708 3.678 1.00 5.86 ATOM 187 CZ2 TRP 20 -3.076 35.485 4.019 1.00 5.86 ATOM 188 CE3 TRP 20 -5.180 34.174 5.378 1.00 5.86 ATOM 189 CZ3 TRP 20 -5.425 35.062 4.347 1.00 5.86 ATOM 190 N ALA 21 -4.282 29.939 9.899 1.00 5.26 ATOM 191 CA ALA 21 -5.140 29.334 10.878 1.00 5.26 ATOM 192 C ALA 21 -4.473 29.211 12.218 1.00 5.26 ATOM 193 O ALA 21 -5.066 29.541 13.244 1.00 5.26 ATOM 195 CB ALA 21 -5.595 27.961 10.408 1.00 5.26 ATOM 196 N SER 22 -3.216 28.724 12.239 1.00 5.23 ATOM 197 CA SER 22 -2.506 28.467 13.465 1.00 5.23 ATOM 198 C SER 22 -2.161 29.726 14.199 1.00 5.23 ATOM 199 O SER 22 -2.398 29.836 15.403 1.00 5.23 ATOM 201 CB SER 22 -1.228 27.674 13.187 1.00 5.23 ATOM 203 OG SER 22 -0.319 28.428 12.406 1.00 5.23 ATOM 204 N LEU 23 -1.570 30.706 13.491 1.00 6.60 ATOM 205 CA LEU 23 -1.110 31.910 14.133 1.00 6.60 ATOM 206 C LEU 23 -2.254 32.696 14.698 1.00 6.60 ATOM 207 O LEU 23 -2.254 33.050 15.872 1.00 6.60 ATOM 209 CB LEU 23 -0.317 32.774 13.150 1.00 6.60 ATOM 210 CG LEU 23 0.393 33.994 13.739 1.00 6.60 ATOM 211 CD1 LEU 23 1.492 34.479 12.805 1.00 6.60 ATOM 212 CD2 LEU 23 -0.600 35.113 14.013 1.00 6.60 ATOM 213 N ALA 24 -3.292 32.951 13.884 1.00 6.97 ATOM 214 CA ALA 24 -4.374 33.813 14.272 1.00 6.97 ATOM 215 C ALA 24 -5.114 33.264 15.459 1.00 6.97 ATOM 216 O ALA 24 -5.593 34.026 16.297 1.00 6.97 ATOM 218 CB ALA 24 -5.333 34.016 13.110 1.00 6.97 ATOM 219 N ALA 25 -5.294 31.934 15.530 1.00 6.52 ATOM 220 CA ALA 25 -6.033 31.324 16.604 1.00 6.52 ATOM 221 C ALA 25 -5.344 31.442 17.935 1.00 6.52 ATOM 222 O ALA 25 -5.974 31.773 18.938 1.00 6.52 ATOM 224 CB ALA 25 -6.289 29.854 16.304 1.00 6.52 ATOM 225 N ASN 26 -4.025 31.180 17.977 1.00 6.77 ATOM 226 CA ASN 26 -3.275 31.176 19.204 1.00 6.77 ATOM 227 C ASN 26 -2.712 32.553 19.389 1.00 6.77 ATOM 228 O ASN 26 -3.452 33.529 19.501 1.00 6.77 ATOM 230 CB ASN 26 -2.191 30.097 19.166 1.00 6.77 ATOM 231 CG ASN 26 -2.764 28.694 19.232 1.00 6.77 ATOM 232 OD1 ASN 26 -3.163 28.225 20.297 1.00 6.77 ATOM 235 ND2 ASN 26 -2.805 28.019 18.088 1.00 6.77 ATOM 236 N GLU 27 -1.373 32.656 19.494 1.00 7.40 ATOM 237 CA GLU 27 -0.740 33.933 19.679 1.00 7.40 ATOM 238 C GLU 27 -0.951 34.771 18.457 1.00 7.40 ATOM 239 O GLU 27 -0.667 34.336 17.349 1.00 7.40 ATOM 241 CB GLU 27 0.751 33.754 19.973 1.00 7.40 ATOM 242 CD GLU 27 2.947 34.829 20.605 1.00 7.40 ATOM 243 CG GLU 27 1.483 35.050 20.279 1.00 7.40 ATOM 244 OE1 GLU 27 3.261 34.569 21.785 1.00 7.40 ATOM 245 OE2 GLU 27 3.781 34.918 19.679 1.00 7.40 ATOM 246 N LEU 28 -1.424 36.023 18.628 1.00 7.77 ATOM 247 CA LEU 28 -1.685 36.911 17.520 1.00 7.77 ATOM 248 C LEU 28 -0.651 37.998 17.482 1.00 7.77 ATOM 249 O LEU 28 -0.114 38.385 18.520 1.00 7.77 ATOM 251 CB LEU 28 -3.092 37.503 17.628 1.00 7.77 ATOM 252 CG LEU 28 -3.496 38.493 16.534 1.00 7.77 ATOM 253 CD1 LEU 28 -3.580 37.797 15.184 1.00 7.77 ATOM 254 CD2 LEU 28 -4.825 39.154 16.871 1.00 7.77 ATOM 255 N ARG 29 -0.287 38.457 16.259 1.00 8.07 ATOM 256 CA ARG 29 0.622 39.559 16.060 1.00 8.07 ATOM 257 C ARG 29 0.019 40.923 16.304 1.00 8.07 ATOM 258 O ARG 29 0.647 41.757 16.952 1.00 8.07 ATOM 260 CB ARG 29 1.190 39.535 14.639 1.00 8.07 ATOM 261 CD ARG 29 2.849 40.449 12.993 1.00 8.07 ATOM 263 NE ARG 29 3.807 41.510 12.694 1.00 8.07 ATOM 264 CG ARG 29 2.213 40.625 14.362 1.00 8.07 ATOM 265 CZ ARG 29 4.487 41.605 11.556 1.00 8.07 ATOM 268 NH1 ARG 29 5.338 42.606 11.373 1.00 8.07 ATOM 271 NH2 ARG 29 4.314 40.699 10.604 1.00 8.07 ATOM 272 N VAL 30 -1.212 41.198 15.805 1.00 8.59 ATOM 273 CA VAL 30 -1.706 42.558 15.851 1.00 8.59 ATOM 274 C VAL 30 -2.845 42.705 16.818 1.00 8.59 ATOM 275 O VAL 30 -3.727 41.853 16.900 1.00 8.59 ATOM 277 CB VAL 30 -2.151 43.045 14.460 1.00 8.59 ATOM 278 CG1 VAL 30 -2.733 44.447 14.546 1.00 8.59 ATOM 279 CG2 VAL 30 -0.984 43.008 13.484 1.00 8.59 ATOM 280 N THR 31 -2.788 43.785 17.632 1.00 9.27 ATOM 281 CA THR 31 -3.775 44.167 18.609 1.00 9.27 ATOM 282 C THR 31 -4.971 44.866 18.019 1.00 9.27 ATOM 283 O THR 31 -6.095 44.671 18.479 1.00 9.27 ATOM 285 CB THR 31 -3.173 45.086 19.689 1.00 9.27 ATOM 287 OG1 THR 31 -2.124 44.396 20.379 1.00 9.27 ATOM 288 CG2 THR 31 -4.237 45.488 20.699 1.00 9.27 ATOM 289 N GLU 32 -4.763 45.718 16.995 1.00 9.47 ATOM 290 CA GLU 32 -5.838 46.545 16.513 1.00 9.47 ATOM 291 C GLU 32 -6.963 45.742 15.941 1.00 9.47 ATOM 292 O GLU 32 -8.124 45.995 16.261 1.00 9.47 ATOM 294 CB GLU 32 -5.326 47.527 15.457 1.00 9.47 ATOM 295 CD GLU 32 -5.841 49.446 13.898 1.00 9.47 ATOM 296 CG GLU 32 -6.390 48.469 14.917 1.00 9.47 ATOM 297 OE1 GLU 32 -4.630 49.372 13.596 1.00 9.47 ATOM 298 OE2 GLU 32 -6.619 50.286 13.400 1.00 9.47 ATOM 299 N ARG 33 -6.641 44.749 15.094 1.00 8.79 ATOM 300 CA ARG 33 -7.606 43.933 14.410 1.00 8.79 ATOM 301 C ARG 33 -8.243 42.993 15.381 1.00 8.79 ATOM 302 O ARG 33 -7.578 42.456 16.265 1.00 8.79 ATOM 304 CB ARG 33 -6.944 43.168 13.263 1.00 8.79 ATOM 305 CD ARG 33 -5.760 43.236 11.051 1.00 8.79 ATOM 307 NE ARG 33 -4.507 42.663 11.537 1.00 8.79 ATOM 308 CG ARG 33 -6.465 44.051 12.122 1.00 8.79 ATOM 309 CZ ARG 33 -3.731 41.850 10.826 1.00 8.79 ATOM 312 NH1 ARG 33 -2.609 41.377 11.351 1.00 8.79 ATOM 315 NH2 ARG 33 -4.080 41.514 9.592 1.00 8.79 ATOM 316 N PRO 34 -9.543 42.839 15.289 1.00 8.42 ATOM 317 CA PRO 34 -10.246 41.886 16.099 1.00 8.42 ATOM 318 C PRO 34 -9.881 40.465 15.783 1.00 8.42 ATOM 319 O PRO 34 -9.404 39.764 16.675 1.00 8.42 ATOM 320 CB PRO 34 -11.720 42.149 15.785 1.00 8.42 ATOM 321 CD PRO 34 -10.510 43.845 14.608 1.00 8.42 ATOM 322 CG PRO 34 -11.767 43.587 15.390 1.00 8.42 ATOM 323 N PHE 35 -10.087 40.018 14.522 1.00 7.90 ATOM 324 CA PHE 35 -9.700 38.688 14.127 1.00 7.90 ATOM 325 C PHE 35 -9.683 38.699 12.625 1.00 7.90 ATOM 326 O PHE 35 -10.487 38.008 12.003 1.00 7.90 ATOM 328 CB PHE 35 -10.668 37.655 14.704 1.00 7.90 ATOM 329 CG PHE 35 -12.080 37.806 14.215 1.00 7.90 ATOM 330 CZ PHE 35 -14.695 38.093 13.315 1.00 7.90 ATOM 331 CD1 PHE 35 -12.519 37.117 13.098 1.00 7.90 ATOM 332 CE1 PHE 35 -13.819 37.256 12.649 1.00 7.90 ATOM 333 CD2 PHE 35 -12.969 38.640 14.871 1.00 7.90 ATOM 334 CE2 PHE 35 -14.269 38.780 14.421 1.00 7.90 ATOM 335 N TRP 36 -8.787 39.475 11.988 1.00 8.01 ATOM 336 CA TRP 36 -8.807 39.528 10.552 1.00 8.01 ATOM 337 C TRP 36 -8.281 38.280 9.916 1.00 8.01 ATOM 338 O TRP 36 -8.916 37.718 9.026 1.00 8.01 ATOM 340 CB TRP 36 -7.999 40.726 10.049 1.00 8.01 ATOM 343 CG TRP 36 -7.990 40.859 8.556 1.00 8.01 ATOM 344 CD1 TRP 36 -7.031 40.402 7.699 1.00 8.01 ATOM 346 NE1 TRP 36 -7.368 40.710 6.403 1.00 8.01 ATOM 347 CD2 TRP 36 -8.987 41.492 7.745 1.00 8.01 ATOM 348 CE2 TRP 36 -8.567 41.380 6.406 1.00 8.01 ATOM 349 CH2 TRP 36 -10.485 42.524 5.642 1.00 8.01 ATOM 350 CZ2 TRP 36 -9.309 41.893 5.345 1.00 8.01 ATOM 351 CE3 TRP 36 -10.194 42.142 8.019 1.00 8.01 ATOM 352 CZ3 TRP 36 -10.927 42.649 6.963 1.00 8.01 ATOM 353 N ILE 37 -7.106 37.807 10.369 1.00 6.86 ATOM 354 CA ILE 37 -6.477 36.650 9.800 1.00 6.86 ATOM 355 C ILE 37 -7.376 35.493 10.066 1.00 6.86 ATOM 356 O ILE 37 -7.571 34.625 9.217 1.00 6.86 ATOM 358 CB ILE 37 -5.065 36.432 10.376 1.00 6.86 ATOM 359 CD1 ILE 37 -2.802 37.574 10.651 1.00 6.86 ATOM 360 CG1 ILE 37 -4.124 37.546 9.915 1.00 6.86 ATOM 361 CG2 ILE 37 -4.542 35.055 10.001 1.00 6.86 ATOM 362 N SER 38 -7.936 35.465 11.289 1.00 7.50 ATOM 363 CA SER 38 -8.817 34.425 11.718 1.00 7.50 ATOM 364 C SER 38 -10.031 34.451 10.846 1.00 7.50 ATOM 365 O SER 38 -10.622 33.411 10.563 1.00 7.50 ATOM 367 CB SER 38 -9.178 34.603 13.194 1.00 7.50 ATOM 369 OG SER 38 -8.040 34.436 14.021 1.00 7.50 ATOM 370 N SER 39 -10.433 35.654 10.395 1.00 7.32 ATOM 371 CA SER 39 -11.593 35.803 9.560 1.00 7.32 ATOM 372 C SER 39 -11.344 35.127 8.247 1.00 7.32 ATOM 373 O SER 39 -12.252 34.524 7.674 1.00 7.32 ATOM 375 CB SER 39 -11.925 37.283 9.364 1.00 7.32 ATOM 377 OG SER 39 -13.069 37.444 8.544 1.00 7.32 ATOM 378 N PHE 40 -10.099 35.211 7.733 1.00 6.84 ATOM 379 CA PHE 40 -9.800 34.619 6.458 1.00 6.84 ATOM 380 C PHE 40 -10.004 33.135 6.528 1.00 6.84 ATOM 381 O PHE 40 -10.659 32.553 5.665 1.00 6.84 ATOM 383 CB PHE 40 -8.367 34.952 6.036 1.00 6.84 ATOM 384 CG PHE 40 -8.186 36.368 5.570 1.00 6.84 ATOM 385 CZ PHE 40 -7.857 38.989 4.704 1.00 6.84 ATOM 386 CD1 PHE 40 -7.071 37.098 5.943 1.00 6.84 ATOM 387 CE1 PHE 40 -6.904 38.401 5.514 1.00 6.84 ATOM 388 CD2 PHE 40 -9.130 36.971 4.759 1.00 6.84 ATOM 389 CE2 PHE 40 -8.964 38.273 4.329 1.00 6.84 ATOM 390 N ILE 41 -9.446 32.482 7.566 1.00 5.88 ATOM 391 CA ILE 41 -9.582 31.061 7.737 1.00 5.88 ATOM 392 C ILE 41 -11.015 30.736 8.012 1.00 5.88 ATOM 393 O ILE 41 -11.515 29.713 7.548 1.00 5.88 ATOM 395 CB ILE 41 -8.674 30.539 8.866 1.00 5.88 ATOM 396 CD1 ILE 41 -6.761 30.090 7.240 1.00 5.88 ATOM 397 CG1 ILE 41 -7.202 30.773 8.517 1.00 5.88 ATOM 398 CG2 ILE 41 -8.962 29.072 9.148 1.00 5.88 ATOM 399 N GLY 42 -11.732 31.613 8.747 1.00 6.21 ATOM 400 CA GLY 42 -13.105 31.311 9.044 1.00 6.21 ATOM 401 C GLY 42 -13.232 30.589 10.350 1.00 6.21 ATOM 402 O GLY 42 -13.230 29.361 10.396 1.00 6.21 ATOM 404 N ARG 43 -13.299 31.371 11.453 1.00 6.37 ATOM 405 CA ARG 43 -13.536 30.870 12.779 1.00 6.37 ATOM 406 C ARG 43 -12.642 29.703 13.036 1.00 6.37 ATOM 407 O ARG 43 -13.072 28.549 13.067 1.00 6.37 ATOM 409 CB ARG 43 -15.006 30.482 12.950 1.00 6.37 ATOM 410 CD ARG 43 -17.405 31.207 13.067 1.00 6.37 ATOM 412 NE ARG 43 -17.855 30.143 12.173 1.00 6.37 ATOM 413 CG ARG 43 -15.978 31.635 12.770 1.00 6.37 ATOM 414 CZ ARG 43 -18.290 30.342 10.933 1.00 6.37 ATOM 417 NH1 ARG 43 -18.679 29.313 10.193 1.00 6.37 ATOM 420 NH2 ARG 43 -18.336 31.571 10.436 1.00 6.37 ATOM 421 N SER 44 -11.353 30.009 13.242 1.00 6.26 ATOM 422 CA SER 44 -10.316 29.037 13.398 1.00 6.26 ATOM 423 C SER 44 -10.642 28.075 14.498 1.00 6.26 ATOM 424 O SER 44 -10.367 26.886 14.353 1.00 6.26 ATOM 426 CB SER 44 -8.977 29.722 13.677 1.00 6.26 ATOM 428 OG SER 44 -7.937 28.771 13.824 1.00 6.26 ATOM 429 N LYS 45 -11.189 28.544 15.640 1.00 6.47 ATOM 430 CA LYS 45 -11.588 27.630 16.682 1.00 6.47 ATOM 431 C LYS 45 -13.034 27.933 16.888 1.00 6.47 ATOM 432 O LYS 45 -13.386 28.832 17.649 1.00 6.47 ATOM 434 CB LYS 45 -10.728 27.833 17.930 1.00 6.47 ATOM 435 CD LYS 45 -8.465 27.717 19.012 1.00 6.47 ATOM 436 CE LYS 45 -6.988 27.426 18.802 1.00 6.47 ATOM 437 CG LYS 45 -9.256 27.512 17.729 1.00 6.47 ATOM 441 NZ LYS 45 -6.203 27.615 20.054 1.00 6.47 TER END