####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS047_5-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS047_5-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 21 14 - 34 4.91 8.79 LCS_AVERAGE: 39.05 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 7 15 - 21 1.97 15.23 LONGEST_CONTINUOUS_SEGMENT: 7 28 - 34 1.79 16.79 LCS_AVERAGE: 13.38 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 5 2 - 6 0.96 17.27 LONGEST_CONTINUOUS_SEGMENT: 5 41 - 45 0.75 12.85 LCS_AVERAGE: 9.04 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 5 5 11 3 3 5 5 5 6 6 6 6 9 10 11 12 14 17 18 25 28 28 34 LCS_GDT V 3 V 3 5 5 13 3 3 5 5 5 6 6 10 11 15 18 21 24 27 29 32 34 36 39 41 LCS_GDT Q 4 Q 4 5 5 13 3 3 6 7 7 7 9 10 11 13 15 19 23 27 29 32 34 37 39 41 LCS_GDT G 5 G 5 5 6 13 0 3 5 5 5 6 7 9 10 11 16 19 21 24 29 32 34 37 39 41 LCS_GDT P 6 P 6 5 6 13 3 4 5 5 5 6 7 7 8 9 11 12 14 19 25 27 29 37 39 41 LCS_GDT W 7 W 7 4 6 13 3 4 4 5 5 6 8 12 14 16 18 21 23 25 28 31 34 37 39 41 LCS_GDT V 8 V 8 4 6 13 3 4 4 5 6 7 9 12 14 16 18 21 23 25 25 27 29 37 39 41 LCS_GDT G 9 G 9 4 6 13 3 4 4 5 5 6 8 10 11 13 15 17 18 20 22 24 25 29 30 31 LCS_GDT S 10 S 10 3 6 13 3 3 4 5 5 6 8 10 11 13 16 17 22 25 25 31 34 37 39 41 LCS_GDT S 11 S 11 3 5 17 3 3 4 4 5 6 8 9 11 13 18 21 23 25 25 31 34 37 39 41 LCS_GDT Y 12 Y 12 3 5 20 3 3 4 4 5 6 6 8 9 12 15 17 22 25 25 31 34 37 39 41 LCS_GDT V 13 V 13 4 4 20 3 4 4 4 5 6 8 12 14 16 18 21 23 26 29 32 34 37 39 41 LCS_GDT A 14 A 14 4 5 21 3 4 4 5 6 8 9 12 14 16 18 21 24 27 29 32 34 37 39 41 LCS_GDT E 15 E 15 4 7 21 4 4 4 5 8 8 9 11 13 16 18 21 24 27 29 32 34 37 39 41 LCS_GDT T 16 T 16 4 7 21 4 4 4 5 8 8 10 11 13 16 18 21 24 27 29 32 34 37 39 41 LCS_GDT G 17 G 17 4 7 21 4 4 5 5 6 7 8 10 11 14 18 20 24 27 29 32 34 37 39 41 LCS_GDT Q 18 Q 18 4 7 21 4 4 4 5 8 8 10 11 13 16 18 21 24 27 29 32 34 37 39 41 LCS_GDT N 19 N 19 4 7 21 4 4 4 5 8 8 9 11 13 15 18 19 23 27 29 32 34 36 39 41 LCS_GDT W 20 W 20 4 7 21 4 4 4 5 8 8 10 11 13 16 18 21 24 27 29 32 34 37 39 41 LCS_GDT A 21 A 21 4 7 21 4 4 4 5 8 8 10 11 13 16 18 21 24 27 29 32 34 37 39 41 LCS_GDT S 22 S 22 3 6 21 3 3 4 5 6 8 10 12 14 16 18 21 24 27 29 32 34 37 39 41 LCS_GDT L 23 L 23 3 6 21 3 3 4 5 6 8 10 12 14 16 18 21 24 27 29 32 34 37 39 41 LCS_GDT A 24 A 24 4 6 21 3 4 5 5 8 8 10 11 13 16 18 21 24 27 29 32 34 37 39 41 LCS_GDT A 25 A 25 4 6 21 3 4 5 5 8 8 8 9 11 13 14 15 18 21 24 27 31 35 39 41 LCS_GDT N 26 N 26 4 6 21 3 4 5 5 6 7 8 10 13 15 17 21 23 25 29 32 34 37 39 41 LCS_GDT E 27 E 27 4 6 21 3 4 5 5 6 8 10 12 14 16 18 21 24 27 29 32 34 37 39 41 LCS_GDT L 28 L 28 4 7 21 4 4 4 6 6 7 10 11 14 16 18 21 23 26 29 32 34 37 39 41 LCS_GDT R 29 R 29 4 7 21 4 4 4 6 6 8 10 12 14 16 18 21 24 27 29 32 34 37 39 41 LCS_GDT V 30 V 30 4 7 21 4 4 4 6 6 8 10 12 14 16 18 21 24 27 29 32 34 37 39 41 LCS_GDT T 31 T 31 4 7 21 4 4 4 6 6 8 10 12 14 16 18 21 24 27 29 32 34 37 39 41 LCS_GDT E 32 E 32 4 7 21 3 4 4 5 6 8 10 12 14 16 18 21 24 27 29 32 34 37 39 41 LCS_GDT R 33 R 33 4 7 21 3 4 4 6 6 8 10 12 14 16 18 21 23 25 28 30 34 37 39 41 LCS_GDT P 34 P 34 4 7 21 3 4 4 6 6 8 10 12 14 16 18 21 24 26 29 32 34 37 39 41 LCS_GDT F 35 F 35 3 5 18 3 3 4 4 6 6 8 8 13 16 18 21 24 27 29 32 34 37 39 41 LCS_GDT W 36 W 36 3 5 17 3 3 4 7 7 7 10 10 12 16 18 21 24 27 29 32 34 37 39 41 LCS_GDT I 37 I 37 3 5 12 3 3 3 5 5 7 8 10 11 12 16 19 19 26 29 32 34 36 39 41 LCS_GDT S 38 S 38 3 5 12 3 3 3 4 6 7 10 10 12 15 18 21 24 27 29 32 34 36 39 41 LCS_GDT S 39 S 39 3 5 12 3 3 4 5 6 6 8 9 12 13 18 21 24 27 29 32 34 37 39 41 LCS_GDT F 40 F 40 3 5 12 3 3 4 5 5 6 10 10 12 15 18 21 24 27 29 32 34 37 39 41 LCS_GDT I 41 I 41 5 5 12 3 5 6 7 7 7 9 10 12 15 18 21 24 27 29 32 34 37 39 41 LCS_GDT G 42 G 42 5 5 12 3 5 6 7 7 7 9 10 12 15 18 20 24 27 29 32 34 37 39 41 LCS_GDT R 43 R 43 5 5 12 3 5 6 7 7 7 8 10 11 13 18 20 23 27 29 32 34 37 39 41 LCS_GDT S 44 S 44 5 5 12 0 5 6 7 7 7 8 10 11 13 18 19 23 27 29 32 34 37 39 41 LCS_GDT K 45 K 45 5 5 12 0 5 6 7 7 7 8 10 11 13 18 19 19 22 25 31 33 37 39 41 LCS_AVERAGE LCS_A: 20.49 ( 9.04 13.38 39.05 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 5 6 7 8 8 10 12 14 16 18 21 24 27 29 32 34 37 39 41 GDT PERCENT_AT 9.09 11.36 13.64 15.91 18.18 18.18 22.73 27.27 31.82 36.36 40.91 47.73 54.55 61.36 65.91 72.73 77.27 84.09 88.64 93.18 GDT RMS_LOCAL 0.17 0.75 0.88 1.24 1.71 1.71 2.47 2.76 3.17 3.55 3.91 4.44 4.94 5.23 5.41 5.78 6.03 6.73 6.75 6.97 GDT RMS_ALL_AT 19.45 12.85 12.03 12.72 14.27 14.27 11.44 9.99 9.84 9.62 9.68 9.55 8.82 8.62 8.60 8.30 8.16 7.63 7.65 7.61 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 15 E 15 # possible swapping detected: E 27 E 27 # possible swapping detected: E 32 E 32 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 21.805 0 0.275 0.310 24.093 0.000 0.000 - LGA V 3 V 3 16.015 0 0.077 0.177 17.919 0.000 0.000 13.387 LGA Q 4 Q 4 14.094 0 0.188 1.002 18.127 0.000 0.000 15.512 LGA G 5 G 5 11.419 0 0.418 0.418 12.211 0.000 0.000 - LGA P 6 P 6 9.217 0 0.232 0.357 13.558 0.000 0.000 13.556 LGA W 7 W 7 4.265 0 0.304 1.051 10.342 20.909 6.104 7.819 LGA V 8 V 8 2.553 0 0.145 0.230 6.585 17.727 10.130 6.585 LGA G 9 G 9 7.381 0 0.506 0.506 9.096 0.000 0.000 - LGA S 10 S 10 5.910 0 0.170 0.487 7.363 0.000 0.000 5.796 LGA S 11 S 11 5.204 0 0.238 0.611 6.457 1.364 1.515 4.509 LGA Y 12 Y 12 6.809 0 0.565 1.081 11.935 0.000 0.000 11.935 LGA V 13 V 13 3.605 0 0.562 0.557 6.622 5.909 3.636 5.956 LGA A 14 A 14 6.088 0 0.208 0.206 8.515 1.364 1.091 - LGA E 15 E 15 7.577 0 0.396 1.125 9.769 0.000 0.000 6.542 LGA T 16 T 16 9.420 0 0.624 0.595 9.769 0.000 0.000 8.041 LGA G 17 G 17 11.685 0 0.140 0.140 11.685 0.000 0.000 - LGA Q 18 Q 18 9.628 0 0.692 1.079 11.585 0.000 0.000 6.110 LGA N 19 N 19 11.696 0 0.198 0.946 17.030 0.000 0.000 16.905 LGA W 20 W 20 9.656 0 0.545 0.415 10.198 0.000 0.000 9.883 LGA A 21 A 21 8.492 0 0.643 0.610 9.965 0.000 0.000 - LGA S 22 S 22 3.294 0 0.627 0.555 6.989 26.818 17.879 6.989 LGA L 23 L 23 1.456 0 0.474 0.913 7.107 36.818 19.773 5.153 LGA A 24 A 24 5.723 0 0.605 0.558 7.220 4.545 3.636 - LGA A 25 A 25 8.929 0 0.083 0.093 10.941 0.000 0.000 - LGA N 26 N 26 5.572 0 0.059 1.453 9.887 7.273 3.636 9.299 LGA E 27 E 27 1.555 0 0.533 1.085 7.640 33.636 17.576 7.640 LGA L 28 L 28 4.864 0 0.506 1.452 11.469 14.091 7.045 11.469 LGA R 29 R 29 1.428 0 0.080 1.201 8.977 60.909 30.744 8.543 LGA V 30 V 30 1.865 0 0.514 1.248 4.626 52.727 36.883 4.626 LGA T 31 T 31 3.159 0 0.544 0.989 7.087 21.364 12.208 6.618 LGA E 32 E 32 3.551 0 0.209 1.479 9.592 41.364 18.384 9.178 LGA R 33 R 33 2.802 0 0.101 1.092 6.974 18.636 6.777 5.795 LGA P 34 P 34 1.585 0 0.171 0.344 3.701 40.455 30.130 3.701 LGA F 35 F 35 6.777 0 0.624 0.455 11.878 0.455 0.165 10.716 LGA W 36 W 36 12.287 0 0.650 1.242 15.809 0.000 0.000 15.170 LGA I 37 I 37 15.834 0 0.513 0.665 19.021 0.000 0.000 19.021 LGA S 38 S 38 16.639 0 0.708 0.633 16.639 0.000 0.000 13.907 LGA S 39 S 39 15.378 0 0.456 0.620 15.920 0.000 0.000 15.920 LGA F 40 F 40 14.051 0 0.566 0.795 16.131 0.000 0.000 15.300 LGA I 41 I 41 14.766 0 0.658 1.163 18.126 0.000 0.000 12.641 LGA G 42 G 42 14.227 0 0.209 0.209 14.630 0.000 0.000 - LGA R 43 R 43 13.459 0 0.625 0.864 14.351 0.000 0.000 11.762 LGA S 44 S 44 12.834 0 0.714 0.646 15.384 0.000 0.000 15.384 LGA K 45 K 45 13.684 0 0.485 0.733 17.878 0.000 0.000 17.346 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 7.581 7.475 8.179 9.236 5.166 0.416 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 12 2.76 31.818 25.992 0.419 LGA_LOCAL RMSD: 2.762 Number of atoms: 12 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 9.993 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 7.581 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.389026 * X + 0.590849 * Y + -0.706793 * Z + -103.878639 Y_new = 0.835037 * X + 0.097860 * Y + 0.541420 * Z + -22.791889 Z_new = 0.389064 * X + -0.800825 * Y + -0.455311 * Z + 72.452347 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.134817 -0.399616 -2.087772 [DEG: 65.0202 -22.8963 -119.6205 ] ZXZ: -2.224474 2.043518 2.689346 [DEG: -127.4530 117.0850 154.0882 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS047_5-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS047_5-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 12 2.76 25.992 7.58 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS047_5-D1 PFRMAT TS TARGET T0953s2 MODEL 5 REFINED PARENT 5IIG_A ATOM 9 N ALA 2 -11.112 37.740 5.866 1.00 0.00 ATOM 10 CA ALA 2 -9.790 38.268 5.782 1.00 0.00 ATOM 11 C ALA 2 -8.861 37.373 6.552 1.00 0.00 ATOM 12 O ALA 2 -8.665 37.579 7.766 1.00 0.00 ATOM 13 CB ALA 2 -9.715 39.729 6.128 1.00 0.00 ATOM 14 N VAL 3 -8.141 36.621 5.761 1.00 0.00 ATOM 15 CA VAL 3 -7.264 35.685 6.322 1.00 0.00 ATOM 16 C VAL 3 -5.817 36.177 6.183 1.00 0.00 ATOM 17 O VAL 3 -5.371 36.317 5.024 1.00 0.00 ATOM 18 CB VAL 3 -7.434 34.323 5.638 1.00 0.00 ATOM 19 CG1 VAL 3 -6.415 33.194 5.850 1.00 0.00 ATOM 20 CG2 VAL 3 -8.857 33.748 5.873 1.00 0.00 ATOM 21 N GLN 4 -5.358 36.837 7.241 1.00 0.00 ATOM 22 CA GLN 4 -4.007 37.219 7.215 1.00 0.00 ATOM 23 C GLN 4 -3.221 35.919 6.940 1.00 0.00 ATOM 24 O GLN 4 -3.050 35.142 7.847 1.00 0.00 ATOM 25 CB GLN 4 -3.501 37.762 8.501 1.00 0.00 ATOM 26 CG GLN 4 -2.254 38.496 8.796 1.00 0.00 ATOM 27 CD GLN 4 -1.960 39.737 7.998 1.00 0.00 ATOM 28 OE1 GLN 4 -0.815 40.126 7.771 1.00 0.00 ATOM 29 NE2 GLN 4 -2.980 40.430 7.508 1.00 0.00 ATOM 30 N GLY 5 -2.412 35.986 5.961 1.00 0.00 ATOM 31 CA GLY 5 -1.662 34.873 5.368 1.00 0.00 ATOM 32 C GLY 5 -0.116 35.102 5.546 1.00 0.00 ATOM 33 O GLY 5 0.480 35.380 4.548 1.00 0.00 ATOM 34 N PRO 6 0.400 35.509 6.727 1.00 0.00 ATOM 35 CA PRO 6 1.790 35.947 6.936 1.00 0.00 ATOM 36 C PRO 6 2.913 35.070 6.459 1.00 0.00 ATOM 37 O PRO 6 3.932 35.131 7.091 1.00 0.00 ATOM 38 CB PRO 6 2.043 36.345 8.438 1.00 0.00 ATOM 39 CG PRO 6 0.548 36.437 8.922 1.00 0.00 ATOM 40 CD PRO 6 -0.355 35.622 7.992 1.00 0.00 ATOM 41 N TRP 7 2.992 34.878 5.180 1.00 0.00 ATOM 42 CA TRP 7 4.073 34.132 4.473 1.00 0.00 ATOM 43 C TRP 7 5.369 35.041 4.613 1.00 0.00 ATOM 44 O TRP 7 5.345 36.176 4.093 1.00 0.00 ATOM 45 CB TRP 7 3.644 34.131 2.981 1.00 0.00 ATOM 46 CG TRP 7 2.472 33.188 2.771 1.00 0.00 ATOM 47 CD1 TRP 7 1.965 32.224 3.595 1.00 0.00 ATOM 48 CD2 TRP 7 1.616 33.259 1.624 1.00 0.00 ATOM 49 NE1 TRP 7 0.817 31.689 3.019 1.00 0.00 ATOM 50 CE2 TRP 7 0.594 32.297 1.813 1.00 0.00 ATOM 51 CE3 TRP 7 1.606 34.049 0.466 1.00 0.00 ATOM 52 CZ2 TRP 7 -0.428 32.099 0.899 1.00 0.00 ATOM 53 CZ3 TRP 7 0.596 33.841 -0.463 1.00 0.00 ATOM 54 CH2 TRP 7 -0.406 32.882 -0.254 1.00 0.00 ATOM 55 N VAL 8 6.442 34.638 5.359 1.00 0.00 ATOM 56 CA VAL 8 7.587 35.532 5.563 1.00 0.00 ATOM 57 C VAL 8 8.277 35.969 4.248 1.00 0.00 ATOM 58 O VAL 8 8.333 37.187 3.963 1.00 0.00 ATOM 59 CB VAL 8 8.623 34.758 6.426 1.00 0.00 ATOM 60 CG1 VAL 8 9.789 35.613 6.843 1.00 0.00 ATOM 61 CG2 VAL 8 7.908 34.268 7.739 1.00 0.00 ATOM 62 N GLY 9 8.868 35.033 3.571 1.00 0.00 ATOM 63 CA GLY 9 9.527 35.193 2.298 1.00 0.00 ATOM 64 C GLY 9 9.104 34.164 1.199 1.00 0.00 ATOM 65 O GLY 9 10.025 33.702 0.514 1.00 0.00 ATOM 66 N SER 10 7.902 33.609 1.196 1.00 0.00 ATOM 67 CA SER 10 7.411 32.545 0.274 1.00 0.00 ATOM 68 C SER 10 7.752 31.098 0.750 1.00 0.00 ATOM 69 O SER 10 7.500 30.133 0.025 1.00 0.00 ATOM 70 CB SER 10 7.881 32.822 -1.160 1.00 0.00 ATOM 71 OG SER 10 8.889 32.037 -1.738 1.00 0.00 ATOM 72 N SER 11 7.810 31.016 2.079 1.00 0.00 ATOM 73 CA SER 11 8.000 29.824 2.862 1.00 0.00 ATOM 74 C SER 11 6.606 29.489 3.519 1.00 0.00 ATOM 75 O SER 11 6.528 28.523 4.293 1.00 0.00 ATOM 76 CB SER 11 9.094 30.047 3.899 1.00 0.00 ATOM 77 OG SER 11 9.007 31.151 4.734 1.00 0.00 ATOM 78 N TYR 12 5.511 30.146 3.043 1.00 0.00 ATOM 79 CA TYR 12 4.162 29.964 3.453 1.00 0.00 ATOM 80 C TYR 12 3.899 30.207 4.922 1.00 0.00 ATOM 81 O TYR 12 3.955 29.196 5.655 1.00 0.00 ATOM 82 CB TYR 12 3.705 28.566 3.005 1.00 0.00 ATOM 83 CG TYR 12 3.586 28.194 1.572 1.00 0.00 ATOM 84 CD1 TYR 12 2.815 28.996 0.717 1.00 0.00 ATOM 85 CD2 TYR 12 4.210 27.071 1.021 1.00 0.00 ATOM 86 CE1 TYR 12 2.702 28.705 -0.634 1.00 0.00 ATOM 87 CE2 TYR 12 4.102 26.776 -0.331 1.00 0.00 ATOM 88 CZ TYR 12 3.364 27.595 -1.163 1.00 0.00 ATOM 89 OH TYR 12 3.276 27.314 -2.492 1.00 0.00 ATOM 90 N VAL 13 4.070 31.434 5.480 1.00 0.00 ATOM 91 CA VAL 13 3.683 31.451 6.929 1.00 0.00 ATOM 92 C VAL 13 2.252 30.914 7.205 1.00 0.00 ATOM 93 O VAL 13 1.226 31.523 6.886 1.00 0.00 ATOM 94 CB VAL 13 4.118 32.610 7.759 1.00 0.00 ATOM 95 CG1 VAL 13 3.807 32.528 9.242 1.00 0.00 ATOM 96 CG2 VAL 13 5.524 33.101 7.471 1.00 0.00 ATOM 97 N ALA 14 2.341 29.908 8.105 1.00 0.00 ATOM 98 CA ALA 14 1.247 29.078 8.552 1.00 0.00 ATOM 99 C ALA 14 0.396 29.740 9.706 1.00 0.00 ATOM 100 O ALA 14 -0.596 29.109 10.112 1.00 0.00 ATOM 101 CB ALA 14 1.848 27.757 9.038 1.00 0.00 ATOM 102 N GLU 15 0.526 31.013 9.949 1.00 0.00 ATOM 103 CA GLU 15 -0.130 31.731 10.958 1.00 0.00 ATOM 104 C GLU 15 -1.317 32.501 10.357 1.00 0.00 ATOM 105 O GLU 15 -1.558 33.683 10.708 1.00 0.00 ATOM 106 CB GLU 15 0.902 32.669 11.520 1.00 0.00 ATOM 107 CG GLU 15 2.104 32.245 12.279 1.00 0.00 ATOM 108 CD GLU 15 2.858 33.401 12.904 1.00 0.00 ATOM 109 OE1 GLU 15 2.406 34.114 13.814 1.00 0.00 ATOM 110 OE2 GLU 15 3.952 33.589 12.387 1.00 0.00 ATOM 111 N THR 16 -1.843 32.054 9.186 1.00 0.00 ATOM 112 CA THR 16 -2.983 32.601 8.504 1.00 0.00 ATOM 113 C THR 16 -4.154 32.656 9.543 1.00 0.00 ATOM 114 O THR 16 -4.652 31.616 9.985 1.00 0.00 ATOM 115 CB THR 16 -3.415 31.638 7.331 1.00 0.00 ATOM 116 OG1 THR 16 -4.028 30.332 7.671 1.00 0.00 ATOM 117 CG2 THR 16 -2.352 31.168 6.322 1.00 0.00 ATOM 118 N GLY 17 -4.654 33.859 9.712 1.00 0.00 ATOM 119 CA GLY 17 -5.712 34.261 10.689 1.00 0.00 ATOM 120 C GLY 17 -7.070 33.456 10.575 1.00 0.00 ATOM 121 O GLY 17 -7.836 33.418 11.547 1.00 0.00 ATOM 122 N GLN 18 -7.365 32.965 9.381 1.00 0.00 ATOM 123 CA GLN 18 -8.578 32.197 9.031 1.00 0.00 ATOM 124 C GLN 18 -9.947 32.973 9.237 1.00 0.00 ATOM 125 O GLN 18 -10.975 32.420 8.807 1.00 0.00 ATOM 126 CB GLN 18 -8.562 30.822 9.756 1.00 0.00 ATOM 127 CG GLN 18 -7.484 29.892 9.229 1.00 0.00 ATOM 128 CD GLN 18 -7.428 28.548 9.967 1.00 0.00 ATOM 129 OE1 GLN 18 -7.947 28.391 11.078 1.00 0.00 ATOM 130 NE2 GLN 18 -6.746 27.631 9.270 1.00 0.00 ATOM 131 N ASN 19 -9.849 34.325 9.113 1.00 0.00 ATOM 132 CA ASN 19 -10.959 35.321 9.249 1.00 0.00 ATOM 133 C ASN 19 -11.476 35.662 10.655 1.00 0.00 ATOM 134 O ASN 19 -11.179 36.772 11.099 1.00 0.00 ATOM 135 CB ASN 19 -12.211 34.901 8.548 1.00 0.00 ATOM 136 CG ASN 19 -13.236 35.935 8.218 1.00 0.00 ATOM 137 OD1 ASN 19 -14.451 35.682 8.288 1.00 0.00 ATOM 138 ND2 ASN 19 -12.720 37.146 7.965 1.00 0.00 ATOM 139 N TRP 20 -12.072 34.788 11.360 1.00 0.00 ATOM 140 CA TRP 20 -12.771 35.010 12.639 1.00 0.00 ATOM 141 C TRP 20 -11.867 35.438 13.777 1.00 0.00 ATOM 142 O TRP 20 -12.023 36.594 14.183 1.00 0.00 ATOM 143 CB TRP 20 -13.542 33.783 12.941 1.00 0.00 ATOM 144 CG TRP 20 -14.301 33.079 11.825 1.00 0.00 ATOM 145 CD1 TRP 20 -14.056 31.838 11.343 1.00 0.00 ATOM 146 CD2 TRP 20 -15.397 33.602 11.067 1.00 0.00 ATOM 147 NE1 TRP 20 -14.926 31.531 10.307 1.00 0.00 ATOM 148 CE2 TRP 20 -15.761 32.612 10.135 1.00 0.00 ATOM 149 CE3 TRP 20 -16.107 34.799 11.091 1.00 0.00 ATOM 150 CZ2 TRP 20 -16.801 32.785 9.212 1.00 0.00 ATOM 151 CZ3 TRP 20 -17.154 34.982 10.200 1.00 0.00 ATOM 152 CH2 TRP 20 -17.482 33.983 9.263 1.00 0.00 ATOM 153 N ALA 21 -10.875 34.659 14.181 1.00 0.00 ATOM 154 CA ALA 21 -10.041 35.011 15.282 1.00 0.00 ATOM 155 C ALA 21 -8.632 35.296 14.814 1.00 0.00 ATOM 156 O ALA 21 -8.165 34.670 13.841 1.00 0.00 ATOM 157 CB ALA 21 -10.091 33.856 16.313 1.00 0.00 ATOM 158 N SER 22 -8.048 36.368 15.402 1.00 0.00 ATOM 159 CA SER 22 -6.670 36.664 15.079 1.00 0.00 ATOM 160 C SER 22 -5.909 35.331 15.291 1.00 0.00 ATOM 161 O SER 22 -5.786 34.888 16.462 1.00 0.00 ATOM 162 CB SER 22 -6.173 37.764 16.038 1.00 0.00 ATOM 163 OG SER 22 -6.509 37.854 17.405 1.00 0.00 ATOM 164 N LEU 23 -5.206 34.909 14.301 1.00 0.00 ATOM 165 CA LEU 23 -4.506 33.645 14.219 1.00 0.00 ATOM 166 C LEU 23 -5.485 32.516 14.756 1.00 0.00 ATOM 167 O LEU 23 -6.625 32.471 14.270 1.00 0.00 ATOM 168 CB LEU 23 -3.188 33.805 14.983 1.00 0.00 ATOM 169 CG LEU 23 -1.965 32.968 14.819 1.00 0.00 ATOM 170 CD1 LEU 23 -2.221 31.486 14.496 1.00 0.00 ATOM 171 CD2 LEU 23 -1.030 33.475 13.682 1.00 0.00 ATOM 172 N ALA 24 -4.980 31.477 15.311 1.00 0.00 ATOM 173 CA ALA 24 -5.706 30.394 15.931 1.00 0.00 ATOM 174 C ALA 24 -4.731 29.773 16.919 1.00 0.00 ATOM 175 O ALA 24 -3.897 28.968 16.483 1.00 0.00 ATOM 176 CB ALA 24 -6.222 29.398 14.900 1.00 0.00 ATOM 177 N ALA 25 -4.966 30.008 18.194 1.00 0.00 ATOM 178 CA ALA 25 -4.105 29.449 19.234 1.00 0.00 ATOM 179 C ALA 25 -2.688 30.123 19.322 1.00 0.00 ATOM 180 O ALA 25 -2.400 30.709 20.383 1.00 0.00 ATOM 181 CB ALA 25 -4.036 27.916 19.137 1.00 0.00 ATOM 182 N ASN 26 -1.869 30.156 18.273 1.00 0.00 ATOM 183 CA ASN 26 -0.502 30.662 18.259 1.00 0.00 ATOM 184 C ASN 26 -0.334 32.201 18.392 1.00 0.00 ATOM 185 O ASN 26 0.635 32.589 19.080 1.00 0.00 ATOM 186 CB ASN 26 0.211 30.181 16.980 1.00 0.00 ATOM 187 CG ASN 26 1.677 30.618 16.828 1.00 0.00 ATOM 188 OD1 ASN 26 2.034 31.369 15.888 1.00 0.00 ATOM 189 ND2 ASN 26 2.565 30.273 17.769 1.00 0.00 ATOM 190 N GLU 27 -1.198 33.040 17.887 1.00 0.00 ATOM 191 CA GLU 27 -0.924 34.392 18.036 1.00 0.00 ATOM 192 C GLU 27 -1.547 35.117 19.234 1.00 0.00 ATOM 193 O GLU 27 -2.686 35.585 19.259 1.00 0.00 ATOM 194 CB GLU 27 -0.903 35.157 16.772 1.00 0.00 ATOM 195 CG GLU 27 0.235 35.289 15.879 1.00 0.00 ATOM 196 CD GLU 27 1.427 35.925 16.602 1.00 0.00 ATOM 197 OE1 GLU 27 1.490 37.156 16.674 1.00 0.00 ATOM 198 OE2 GLU 27 2.286 35.185 17.102 1.00 0.00 ATOM 199 N LEU 28 -0.546 35.545 19.987 1.00 0.00 ATOM 200 CA LEU 28 -0.576 36.261 21.207 1.00 0.00 ATOM 201 C LEU 28 -0.063 37.668 20.868 1.00 0.00 ATOM 202 O LEU 28 1.161 37.831 20.672 1.00 0.00 ATOM 203 CB LEU 28 0.274 35.669 22.310 1.00 0.00 ATOM 204 CG LEU 28 0.485 36.534 23.582 1.00 0.00 ATOM 205 CD1 LEU 28 -0.824 36.675 24.336 1.00 0.00 ATOM 206 CD2 LEU 28 1.592 35.828 24.396 1.00 0.00 ATOM 207 N ARG 29 -0.934 38.618 20.981 1.00 0.00 ATOM 208 CA ARG 29 -0.600 40.005 20.605 1.00 0.00 ATOM 209 C ARG 29 -0.173 40.032 19.078 1.00 0.00 ATOM 210 O ARG 29 0.829 40.667 18.743 1.00 0.00 ATOM 211 CB ARG 29 0.458 40.583 21.562 1.00 0.00 ATOM 212 CG ARG 29 0.137 40.451 23.047 1.00 0.00 ATOM 213 CD ARG 29 -1.069 41.250 23.439 1.00 0.00 ATOM 214 NE ARG 29 -0.706 42.656 23.681 1.00 0.00 ATOM 215 CZ ARG 29 -0.449 43.211 24.862 1.00 0.00 ATOM 216 NH1 ARG 29 -0.611 42.596 26.031 1.00 0.00 ATOM 217 NH2 ARG 29 0.141 44.409 24.860 1.00 0.00 ATOM 218 N VAL 30 -0.961 39.368 18.175 1.00 0.00 ATOM 219 CA VAL 30 -0.791 39.347 16.715 1.00 0.00 ATOM 220 C VAL 30 -1.571 40.396 15.968 1.00 0.00 ATOM 221 O VAL 30 -1.659 40.228 14.796 1.00 0.00 ATOM 222 CB VAL 30 -1.244 37.999 16.235 1.00 0.00 ATOM 223 CG1 VAL 30 -2.714 37.689 16.350 1.00 0.00 ATOM 224 CG2 VAL 30 -0.736 37.590 14.839 1.00 0.00 ATOM 225 N THR 31 -2.028 41.443 16.532 1.00 0.00 ATOM 226 CA THR 31 -2.791 42.394 15.767 1.00 0.00 ATOM 227 C THR 31 -4.078 41.772 15.227 1.00 0.00 ATOM 228 O THR 31 -4.026 41.131 14.198 1.00 0.00 ATOM 229 CB THR 31 -1.980 42.986 14.548 1.00 0.00 ATOM 230 OG1 THR 31 -2.623 43.186 13.273 1.00 0.00 ATOM 231 CG2 THR 31 -0.512 42.597 14.471 1.00 0.00 ATOM 232 N GLU 32 -5.163 41.639 16.015 1.00 0.00 ATOM 233 CA GLU 32 -6.364 41.144 15.415 1.00 0.00 ATOM 234 C GLU 32 -6.717 42.192 14.310 1.00 0.00 ATOM 235 O GLU 32 -7.397 43.163 14.565 1.00 0.00 ATOM 236 CB GLU 32 -7.426 41.000 16.518 1.00 0.00 ATOM 237 CG GLU 32 -8.747 40.559 15.931 1.00 0.00 ATOM 238 CD GLU 32 -9.894 40.781 16.888 1.00 0.00 ATOM 239 OE1 GLU 32 -10.378 41.929 16.961 1.00 0.00 ATOM 240 OE2 GLU 32 -10.339 39.813 17.546 1.00 0.00 ATOM 241 N ARG 33 -6.792 41.643 13.124 1.00 0.00 ATOM 242 CA ARG 33 -6.911 42.452 11.963 1.00 0.00 ATOM 243 C ARG 33 -8.369 42.579 11.491 1.00 0.00 ATOM 244 O ARG 33 -8.841 41.566 10.991 1.00 0.00 ATOM 245 CB ARG 33 -6.029 41.658 10.996 1.00 0.00 ATOM 246 CG ARG 33 -4.617 41.746 10.568 1.00 0.00 ATOM 247 CD ARG 33 -4.005 40.767 11.560 1.00 0.00 ATOM 248 NE ARG 33 -2.776 40.494 10.663 1.00 0.00 ATOM 249 CZ ARG 33 -2.074 39.647 11.511 1.00 0.00 ATOM 250 NH1 ARG 33 -0.709 39.684 11.696 1.00 0.00 ATOM 251 NH2 ARG 33 -2.733 38.695 12.055 1.00 0.00 ATOM 252 N PRO 34 -9.253 43.509 11.878 1.00 0.00 ATOM 253 CA PRO 34 -10.487 43.599 11.206 1.00 0.00 ATOM 254 C PRO 34 -10.296 44.100 9.747 1.00 0.00 ATOM 255 O PRO 34 -9.742 45.173 9.510 1.00 0.00 ATOM 256 CB PRO 34 -11.464 44.564 11.978 1.00 0.00 ATOM 257 CG PRO 34 -10.555 45.258 12.993 1.00 0.00 ATOM 258 CD PRO 34 -9.210 44.545 12.983 1.00 0.00 ATOM 259 N PHE 35 -11.252 43.596 9.055 1.00 0.00 ATOM 260 CA PHE 35 -11.535 43.843 7.660 1.00 0.00 ATOM 261 C PHE 35 -12.900 44.521 7.449 1.00 0.00 ATOM 262 O PHE 35 -13.384 44.484 6.312 1.00 0.00 ATOM 263 CB PHE 35 -11.649 42.462 7.041 1.00 0.00 ATOM 264 CG PHE 35 -12.820 41.608 7.391 1.00 0.00 ATOM 265 CD1 PHE 35 -13.998 41.673 6.647 1.00 0.00 ATOM 266 CD2 PHE 35 -12.760 40.814 8.533 1.00 0.00 ATOM 267 CE1 PHE 35 -15.105 40.940 7.068 1.00 0.00 ATOM 268 CE2 PHE 35 -13.880 40.094 8.929 1.00 0.00 ATOM 269 CZ PHE 35 -15.054 40.152 8.202 1.00 0.00 ATOM 270 N TRP 36 -13.524 45.089 8.449 1.00 0.00 ATOM 271 CA TRP 36 -14.850 45.683 8.418 1.00 0.00 ATOM 272 C TRP 36 -15.133 46.394 7.101 1.00 0.00 ATOM 273 O TRP 36 -16.298 46.303 6.669 1.00 0.00 ATOM 274 CB TRP 36 -14.950 46.603 9.629 1.00 0.00 ATOM 275 CG TRP 36 -16.242 47.221 9.999 1.00 0.00 ATOM 276 CD1 TRP 36 -17.347 46.644 10.569 1.00 0.00 ATOM 277 CD2 TRP 36 -16.389 48.602 10.129 1.00 0.00 ATOM 278 NE1 TRP 36 -18.258 47.630 10.896 1.00 0.00 ATOM 279 CE2 TRP 36 -17.682 48.860 10.628 1.00 0.00 ATOM 280 CE3 TRP 36 -15.579 49.650 9.716 1.00 0.00 ATOM 281 CZ2 TRP 36 -18.156 50.150 10.746 1.00 0.00 ATOM 282 CZ3 TRP 36 -16.030 50.937 9.846 1.00 0.00 ATOM 283 CH2 TRP 36 -17.335 51.188 10.314 1.00 0.00 ATOM 284 N ILE 37 -14.271 47.326 6.589 1.00 0.00 ATOM 285 CA ILE 37 -14.567 47.900 5.239 1.00 0.00 ATOM 286 C ILE 37 -14.265 46.691 4.323 1.00 0.00 ATOM 287 O ILE 37 -14.981 45.679 4.507 1.00 0.00 ATOM 288 CB ILE 37 -13.712 49.130 4.984 1.00 0.00 ATOM 289 CG1 ILE 37 -14.314 50.059 3.961 1.00 0.00 ATOM 290 CG2 ILE 37 -12.315 48.758 4.439 1.00 0.00 ATOM 291 CD1 ILE 37 -13.518 51.319 3.505 1.00 0.00 ATOM 292 N SER 38 -13.801 46.911 3.098 1.00 0.00 ATOM 293 CA SER 38 -13.426 45.747 2.299 1.00 0.00 ATOM 294 C SER 38 -12.586 44.852 3.249 1.00 0.00 ATOM 295 O SER 38 -12.008 45.359 4.234 1.00 0.00 ATOM 296 CB SER 38 -12.704 46.255 1.028 1.00 0.00 ATOM 297 OG SER 38 -11.401 46.821 1.225 1.00 0.00 ATOM 298 N SER 39 -12.561 43.534 2.984 1.00 0.00 ATOM 299 CA SER 39 -11.861 42.627 3.885 1.00 0.00 ATOM 300 C SER 39 -10.305 42.721 3.813 1.00 0.00 ATOM 301 O SER 39 -9.623 41.968 3.115 1.00 0.00 ATOM 302 CB SER 39 -12.258 41.217 3.527 1.00 0.00 ATOM 303 OG SER 39 -13.569 40.904 3.268 1.00 0.00 ATOM 304 N PHE 40 -9.849 43.826 4.407 1.00 0.00 ATOM 305 CA PHE 40 -8.479 44.190 4.607 1.00 0.00 ATOM 306 C PHE 40 -8.441 44.316 6.137 1.00 0.00 ATOM 307 O PHE 40 -8.623 45.408 6.645 1.00 0.00 ATOM 308 CB PHE 40 -8.019 45.445 3.816 1.00 0.00 ATOM 309 CG PHE 40 -7.972 45.178 2.353 1.00 0.00 ATOM 310 CD1 PHE 40 -9.158 45.023 1.619 1.00 0.00 ATOM 311 CD2 PHE 40 -6.712 45.064 1.728 1.00 0.00 ATOM 312 CE1 PHE 40 -9.131 44.765 0.233 1.00 0.00 ATOM 313 CE2 PHE 40 -6.676 44.788 0.367 1.00 0.00 ATOM 314 CZ PHE 40 -7.854 44.621 -0.366 1.00 0.00 ATOM 315 N ILE 41 -7.920 43.296 6.702 1.00 0.00 ATOM 316 CA ILE 41 -7.739 43.153 8.095 1.00 0.00 ATOM 317 C ILE 41 -6.348 43.546 8.701 1.00 0.00 ATOM 318 O ILE 41 -6.404 43.995 9.833 1.00 0.00 ATOM 319 CB ILE 41 -8.110 41.704 8.388 1.00 0.00 ATOM 320 CG1 ILE 41 -7.207 40.702 7.669 1.00 0.00 ATOM 321 CG2 ILE 41 -9.524 41.218 8.419 1.00 0.00 ATOM 322 CD1 ILE 41 -5.902 40.354 8.349 1.00 0.00 ATOM 323 N GLY 42 -5.341 43.936 7.924 1.00 0.00 ATOM 324 CA GLY 42 -3.995 44.090 8.508 1.00 0.00 ATOM 325 C GLY 42 -3.848 44.468 10.043 1.00 0.00 ATOM 326 O GLY 42 -3.000 43.841 10.660 1.00 0.00 ATOM 327 N ARG 43 -4.192 45.691 10.423 1.00 0.00 ATOM 328 CA ARG 43 -4.200 46.210 11.783 1.00 0.00 ATOM 329 C ARG 43 -2.775 46.458 12.409 1.00 0.00 ATOM 330 O ARG 43 -2.647 47.475 13.085 1.00 0.00 ATOM 331 CB ARG 43 -5.091 45.419 12.744 1.00 0.00 ATOM 332 CG ARG 43 -5.292 46.111 14.072 1.00 0.00 ATOM 333 CD ARG 43 -5.486 45.103 15.236 1.00 0.00 ATOM 334 NE ARG 43 -5.584 46.036 16.413 1.00 0.00 ATOM 335 CZ ARG 43 -6.718 46.721 16.587 1.00 0.00 ATOM 336 NH1 ARG 43 -7.657 46.494 15.674 1.00 0.00 ATOM 337 NH2 ARG 43 -6.902 47.600 17.596 1.00 0.00 ATOM 338 N SER 44 -1.841 45.482 12.410 1.00 0.00 ATOM 339 CA SER 44 -0.454 45.564 12.967 1.00 0.00 ATOM 340 C SER 44 -0.259 45.318 14.527 1.00 0.00 ATOM 341 O SER 44 0.848 44.848 14.866 1.00 0.00 ATOM 342 CB SER 44 0.201 46.916 12.591 1.00 0.00 ATOM 343 OG SER 44 0.263 47.244 11.213 1.00 0.00 ATOM 344 N LYS 45 -0.952 46.052 15.446 1.00 0.00 ATOM 345 CA LYS 45 -0.826 45.858 16.923 1.00 0.00 ATOM 346 C LYS 45 0.676 45.847 17.436 1.00 0.00 ATOM 347 O LYS 45 1.051 44.922 18.171 1.00 0.00 ATOM 348 CB LYS 45 -1.570 44.636 17.435 1.00 0.00 ATOM 349 CG LYS 45 -2.112 44.764 18.837 1.00 0.00 ATOM 350 CD LYS 45 -3.620 44.608 18.874 1.00 0.00 ATOM 351 CE LYS 45 -4.239 45.298 20.098 1.00 0.00 ATOM 352 NZ LYS 45 -4.157 44.401 21.289 1.00 0.00 TER END