####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS047_4-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS047_4-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 23 10 - 32 4.91 13.22 LCS_AVERAGE: 47.16 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 19 - 29 1.79 16.40 LONGEST_CONTINUOUS_SEGMENT: 11 20 - 30 1.99 16.25 LCS_AVERAGE: 17.82 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 20 - 29 0.43 16.56 LCS_AVERAGE: 13.74 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 3 10 3 3 3 3 3 6 6 6 7 7 19 22 22 26 28 31 33 33 34 34 LCS_GDT V 3 V 3 3 3 12 3 3 3 3 3 6 6 6 8 8 8 9 16 24 28 31 33 33 34 34 LCS_GDT Q 4 Q 4 4 7 22 3 3 4 5 6 7 7 7 12 15 19 22 24 26 28 31 33 33 34 34 LCS_GDT G 5 G 5 4 7 22 1 4 4 6 7 8 10 13 14 17 20 22 24 26 28 31 33 33 34 34 LCS_GDT P 6 P 6 4 7 22 3 4 4 6 7 7 7 9 12 15 18 22 23 24 26 31 33 33 34 34 LCS_GDT W 7 W 7 4 7 22 3 4 4 6 7 7 7 9 12 15 18 22 23 24 27 31 33 33 34 34 LCS_GDT V 8 V 8 4 7 22 3 4 4 6 7 8 10 13 14 17 20 22 24 26 28 31 33 33 34 34 LCS_GDT G 9 G 9 6 8 22 4 6 6 7 8 8 10 13 14 17 20 22 24 26 28 31 33 33 34 34 LCS_GDT S 10 S 10 6 8 23 4 6 6 7 8 8 10 13 14 17 20 22 24 26 28 31 33 33 34 34 LCS_GDT S 11 S 11 6 8 23 4 6 6 7 8 8 9 12 14 17 20 22 24 26 28 31 33 33 34 34 LCS_GDT Y 12 Y 12 6 8 23 4 6 6 7 8 8 9 10 13 17 20 22 24 26 28 31 33 33 34 34 LCS_GDT V 13 V 13 6 8 23 4 6 6 7 8 8 10 13 14 17 20 22 24 26 28 31 33 33 34 34 LCS_GDT A 14 A 14 6 8 23 3 6 6 7 8 8 9 13 14 16 18 22 24 26 28 31 33 33 34 34 LCS_GDT E 15 E 15 6 8 23 4 4 6 7 8 9 11 13 14 17 18 22 24 26 28 31 33 33 34 34 LCS_GDT T 16 T 16 4 8 23 4 4 5 6 8 9 11 13 14 17 20 22 24 26 28 31 33 33 34 34 LCS_GDT G 17 G 17 4 6 23 3 4 4 5 7 9 11 13 14 17 20 22 24 26 28 31 33 33 34 34 LCS_GDT Q 18 Q 18 4 6 23 3 4 4 5 7 9 11 13 14 15 20 22 24 26 28 31 33 33 34 34 LCS_GDT N 19 N 19 4 11 23 3 4 4 5 7 9 11 13 14 16 20 22 24 26 28 31 33 33 34 34 LCS_GDT W 20 W 20 10 11 23 9 10 10 10 10 10 11 13 14 15 20 22 24 26 28 31 33 33 34 34 LCS_GDT A 21 A 21 10 11 23 9 10 10 10 10 10 10 11 12 15 18 22 23 24 26 29 33 33 34 34 LCS_GDT S 22 S 22 10 11 23 3 10 10 10 10 10 10 11 12 15 18 22 23 24 28 31 33 33 34 34 LCS_GDT L 23 L 23 10 11 23 9 10 10 10 10 10 10 13 14 17 20 22 24 26 28 31 33 33 34 34 LCS_GDT A 24 A 24 10 11 23 9 10 10 10 10 10 11 13 14 17 20 22 24 26 28 31 33 33 34 34 LCS_GDT A 25 A 25 10 11 23 9 10 10 10 10 10 11 13 14 17 20 22 24 26 28 31 33 33 34 34 LCS_GDT N 26 N 26 10 11 23 9 10 10 10 10 10 10 12 13 17 20 22 24 26 28 31 33 33 34 34 LCS_GDT E 27 E 27 10 11 23 9 10 10 10 10 10 10 11 12 14 15 18 22 23 26 29 30 32 34 34 LCS_GDT L 28 L 28 10 11 23 9 10 10 10 10 10 10 11 12 15 19 22 24 25 27 31 33 33 34 34 LCS_GDT R 29 R 29 10 11 23 9 10 10 10 10 10 11 13 14 17 20 22 24 26 28 31 33 33 34 34 LCS_GDT V 30 V 30 4 11 23 3 4 4 4 5 9 11 13 14 17 20 22 24 26 28 31 33 33 34 34 LCS_GDT T 31 T 31 4 8 23 3 4 4 6 8 9 11 13 14 17 20 22 24 26 28 31 33 33 34 34 LCS_GDT E 32 E 32 7 8 23 4 5 7 7 7 8 10 13 14 17 20 22 24 26 28 31 33 33 34 34 LCS_GDT R 33 R 33 7 8 21 3 5 7 7 8 8 10 13 14 16 18 20 24 26 28 31 33 33 34 34 LCS_GDT P 34 P 34 7 8 21 3 5 7 7 8 8 9 11 14 16 18 20 23 26 28 31 33 33 34 34 LCS_GDT F 35 F 35 7 8 20 3 5 7 7 8 8 9 11 12 14 18 22 23 24 26 30 33 33 34 34 LCS_GDT W 36 W 36 7 8 20 3 5 7 7 8 8 9 11 12 13 15 17 18 20 21 22 24 24 28 31 LCS_GDT I 37 I 37 7 8 18 3 5 7 7 8 8 9 9 12 13 15 17 18 19 21 22 23 23 25 26 LCS_GDT S 38 S 38 7 8 18 3 5 7 7 8 8 9 10 12 13 15 17 18 19 21 22 23 23 25 26 LCS_GDT S 39 S 39 4 5 17 3 4 4 5 5 5 6 7 10 12 13 13 15 19 19 20 23 23 24 26 LCS_GDT F 40 F 40 4 5 16 3 4 4 5 6 6 7 9 10 11 13 13 14 15 15 17 19 20 24 26 LCS_GDT I 41 I 41 4 5 16 3 4 4 6 7 7 9 9 10 12 13 13 15 17 17 19 22 22 24 26 LCS_GDT G 42 G 42 4 5 16 3 4 4 5 5 5 6 7 7 10 12 12 14 17 17 18 20 22 24 29 LCS_GDT R 43 R 43 3 4 16 3 3 3 5 6 7 9 9 10 12 13 13 14 15 16 20 22 25 30 33 LCS_GDT S 44 S 44 3 4 16 0 3 3 3 4 5 6 7 7 12 13 13 14 15 16 18 20 24 26 30 LCS_GDT K 45 K 45 3 4 15 0 3 3 3 4 5 6 7 7 7 7 7 9 9 10 16 20 31 31 32 LCS_AVERAGE LCS_A: 26.24 ( 13.74 17.82 47.16 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 9 10 10 10 10 10 11 13 14 17 20 22 24 26 28 31 33 33 34 34 GDT PERCENT_AT 20.45 22.73 22.73 22.73 22.73 22.73 25.00 29.55 31.82 38.64 45.45 50.00 54.55 59.09 63.64 70.45 75.00 75.00 77.27 77.27 GDT RMS_LOCAL 0.35 0.43 0.43 0.43 0.43 0.43 2.37 3.06 3.18 4.01 4.40 4.52 4.82 5.21 5.43 5.83 6.05 6.05 6.19 6.19 GDT RMS_ALL_AT 16.58 16.56 16.56 16.56 16.56 16.56 14.60 11.08 10.93 11.67 11.71 12.01 11.59 11.38 11.35 10.84 10.67 10.67 10.68 10.68 # Checking swapping # possible swapping detected: E 27 E 27 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 13.113 0 0.626 0.632 15.247 0.000 0.000 - LGA V 3 V 3 11.519 0 0.656 0.872 14.069 0.000 0.000 11.357 LGA Q 4 Q 4 9.821 0 0.584 1.698 15.233 0.000 0.000 15.233 LGA G 5 G 5 2.721 0 0.731 0.731 5.153 8.636 8.636 - LGA P 6 P 6 6.601 0 0.143 0.198 9.926 0.000 0.000 9.926 LGA W 7 W 7 7.017 0 0.418 1.068 13.587 4.091 1.169 10.530 LGA V 8 V 8 2.688 0 0.104 0.205 6.583 21.818 12.468 6.583 LGA G 9 G 9 2.700 0 0.441 0.441 4.076 30.455 30.455 - LGA S 10 S 10 2.586 0 0.082 0.579 5.735 34.545 23.939 5.735 LGA S 11 S 11 5.020 0 0.121 0.760 7.575 3.636 2.424 7.575 LGA Y 12 Y 12 5.391 0 0.091 1.186 16.384 4.545 1.515 16.384 LGA V 13 V 13 3.537 0 0.646 0.919 6.537 18.182 10.390 6.537 LGA A 14 A 14 3.778 0 0.188 0.203 5.360 18.182 14.545 - LGA E 15 E 15 3.026 0 0.659 1.205 8.013 43.182 19.394 8.013 LGA T 16 T 16 1.917 0 0.040 0.159 4.911 25.455 26.234 4.148 LGA G 17 G 17 7.432 0 0.437 0.437 9.480 0.000 0.000 - LGA Q 18 Q 18 9.356 0 0.107 1.077 12.806 0.000 0.000 12.806 LGA N 19 N 19 9.390 0 0.028 1.165 9.967 0.000 0.000 6.243 LGA W 20 W 20 10.146 0 0.657 0.523 14.409 0.000 0.000 14.409 LGA A 21 A 21 11.301 0 0.105 0.105 13.990 0.000 0.000 - LGA S 22 S 22 9.195 0 0.179 0.619 11.402 0.000 0.000 11.309 LGA L 23 L 23 4.184 0 0.042 1.295 7.979 23.636 12.500 6.748 LGA A 24 A 24 3.921 0 0.031 0.046 6.828 19.091 15.273 - LGA A 25 A 25 2.005 0 0.059 0.065 4.600 35.909 29.091 - LGA N 26 N 26 6.158 0 0.055 0.869 10.238 2.727 1.364 9.675 LGA E 27 E 27 8.421 0 0.117 1.039 11.680 0.000 0.000 10.806 LGA L 28 L 28 8.403 0 0.264 0.277 11.655 0.000 0.000 8.889 LGA R 29 R 29 8.333 0 0.368 1.014 14.742 0.000 0.000 14.742 LGA V 30 V 30 9.031 0 0.631 0.592 9.622 0.000 0.000 9.622 LGA T 31 T 31 7.975 0 0.198 0.245 11.958 0.455 0.260 9.559 LGA E 32 E 32 2.655 0 0.673 1.374 4.617 26.818 18.586 4.124 LGA R 33 R 33 3.115 0 0.560 1.367 11.034 36.818 13.388 10.990 LGA P 34 P 34 4.877 0 0.655 0.625 7.099 10.000 11.948 4.197 LGA F 35 F 35 8.190 0 0.175 1.189 11.424 0.000 0.000 5.894 LGA W 36 W 36 15.286 0 0.059 0.134 21.163 0.000 0.000 20.537 LGA I 37 I 37 17.954 0 0.467 1.202 20.523 0.000 0.000 18.696 LGA S 38 S 38 21.258 0 0.399 0.721 22.228 0.000 0.000 21.149 LGA S 39 S 39 21.450 0 0.294 0.522 21.832 0.000 0.000 21.695 LGA F 40 F 40 23.137 0 0.094 1.408 25.666 0.000 0.000 24.883 LGA I 41 I 41 22.646 0 0.061 0.462 26.313 0.000 0.000 26.313 LGA G 42 G 42 21.028 0 0.075 0.075 21.944 0.000 0.000 - LGA R 43 R 43 15.442 0 0.706 1.058 17.569 0.000 0.000 10.857 LGA S 44 S 44 16.420 0 0.597 0.928 18.554 0.000 0.000 18.554 LGA K 45 K 45 15.434 0 0.428 1.011 21.404 0.000 0.000 21.404 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 9.360 9.186 10.504 8.368 5.763 0.468 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 13 3.06 36.364 30.033 0.411 LGA_LOCAL RMSD: 3.062 Number of atoms: 13 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 11.084 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 9.360 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.696006 * X + -0.205268 * Y + 0.688070 * Z + -29.531445 Y_new = -0.583992 * X + -0.719365 * Y + 0.376123 * Z + 64.603607 Z_new = 0.417767 * X + -0.663611 * Y + -0.620557 * Z + 24.833168 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.698109 -0.430986 -2.322680 [DEG: -39.9987 -24.6937 -133.0798 ] ZXZ: 2.071052 2.240249 2.579738 [DEG: 118.6625 128.3568 147.8081 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS047_4-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS047_4-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 13 3.06 30.033 9.36 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS047_4-D1 PFRMAT TS TARGET T0953s2 MODEL 4 REFINED PARENT 1XMB_A ATOM 9 N ALA 2 6.329 45.305 3.524 1.00 0.00 ATOM 10 CA ALA 2 5.818 44.957 4.806 1.00 0.00 ATOM 11 C ALA 2 4.459 44.178 4.790 1.00 0.00 ATOM 12 O ALA 2 3.847 44.232 5.852 1.00 0.00 ATOM 13 CB ALA 2 5.708 46.290 5.564 1.00 0.00 ATOM 14 N VAL 3 3.742 44.258 3.637 1.00 0.00 ATOM 15 CA VAL 3 2.501 43.523 3.378 1.00 0.00 ATOM 16 C VAL 3 2.802 42.331 2.388 1.00 0.00 ATOM 17 O VAL 3 2.039 41.360 2.417 1.00 0.00 ATOM 18 CB VAL 3 1.431 44.477 2.839 1.00 0.00 ATOM 19 CG1 VAL 3 0.861 45.404 3.874 1.00 0.00 ATOM 20 CG2 VAL 3 2.017 45.310 1.686 1.00 0.00 ATOM 21 N GLN 4 3.742 42.472 1.402 1.00 0.00 ATOM 22 CA GLN 4 4.143 41.378 0.516 1.00 0.00 ATOM 23 C GLN 4 4.830 40.281 1.359 1.00 0.00 ATOM 24 O GLN 4 4.346 39.144 1.266 1.00 0.00 ATOM 25 CB GLN 4 4.940 41.827 -0.752 1.00 0.00 ATOM 26 CG GLN 4 5.626 40.629 -1.545 1.00 0.00 ATOM 27 CD GLN 4 4.540 39.646 -1.988 1.00 0.00 ATOM 28 OE1 GLN 4 3.341 40.210 -2.235 1.00 0.00 ATOM 29 NE2 GLN 4 4.848 38.369 -2.110 1.00 0.00 ATOM 30 N GLY 5 5.987 40.501 1.969 1.00 0.00 ATOM 31 CA GLY 5 6.689 39.579 2.837 1.00 0.00 ATOM 32 C GLY 5 6.483 39.702 4.356 1.00 0.00 ATOM 33 O GLY 5 7.178 38.937 5.046 1.00 0.00 ATOM 34 N PRO 6 5.668 40.616 4.983 1.00 0.00 ATOM 35 CA PRO 6 5.624 40.683 6.452 1.00 0.00 ATOM 36 C PRO 6 5.427 39.303 7.054 1.00 0.00 ATOM 37 O PRO 6 6.092 39.041 8.076 1.00 0.00 ATOM 38 CB PRO 6 4.416 41.578 6.923 1.00 0.00 ATOM 39 CG PRO 6 3.584 41.653 5.606 1.00 0.00 ATOM 40 CD PRO 6 4.506 41.394 4.447 1.00 0.00 ATOM 41 N TRP 7 4.230 38.790 6.784 1.00 0.00 ATOM 42 CA TRP 7 3.971 37.486 7.230 1.00 0.00 ATOM 43 C TRP 7 5.098 36.645 6.673 1.00 0.00 ATOM 44 O TRP 7 5.476 36.901 5.497 1.00 0.00 ATOM 45 CB TRP 7 2.510 37.152 6.787 1.00 0.00 ATOM 46 CG TRP 7 1.970 35.842 7.226 1.00 0.00 ATOM 47 CD1 TRP 7 1.496 35.489 8.463 1.00 0.00 ATOM 48 CD2 TRP 7 1.478 34.905 6.318 1.00 0.00 ATOM 49 NE1 TRP 7 0.865 34.263 8.375 1.00 0.00 ATOM 50 CE2 TRP 7 0.843 33.879 7.046 1.00 0.00 ATOM 51 CE3 TRP 7 1.658 34.779 4.948 1.00 0.00 ATOM 52 CZ2 TRP 7 0.363 32.749 6.417 1.00 0.00 ATOM 53 CZ3 TRP 7 1.169 33.671 4.306 1.00 0.00 ATOM 54 CH2 TRP 7 0.566 32.632 5.045 1.00 0.00 ATOM 55 N VAL 8 5.455 35.566 7.260 1.00 0.00 ATOM 56 CA VAL 8 6.660 34.931 6.785 1.00 0.00 ATOM 57 C VAL 8 6.571 34.145 5.442 1.00 0.00 ATOM 58 O VAL 8 7.600 33.808 4.882 1.00 0.00 ATOM 59 CB VAL 8 7.493 34.295 7.859 1.00 0.00 ATOM 60 CG1 VAL 8 8.845 33.701 7.381 1.00 0.00 ATOM 61 CG2 VAL 8 7.641 35.075 9.135 1.00 0.00 ATOM 62 N GLY 9 5.433 34.249 4.702 1.00 0.00 ATOM 63 CA GLY 9 5.220 33.646 3.397 1.00 0.00 ATOM 64 C GLY 9 4.491 32.294 3.364 1.00 0.00 ATOM 65 O GLY 9 4.723 31.559 2.409 1.00 0.00 ATOM 66 N SER 10 3.691 31.983 4.374 1.00 0.00 ATOM 67 CA SER 10 2.906 30.722 4.536 1.00 0.00 ATOM 68 C SER 10 3.787 29.593 5.119 1.00 0.00 ATOM 69 O SER 10 3.255 28.869 5.956 1.00 0.00 ATOM 70 CB SER 10 2.277 30.259 3.195 1.00 0.00 ATOM 71 OG SER 10 1.380 31.174 2.588 1.00 0.00 ATOM 72 N SER 11 4.869 29.155 4.411 1.00 0.00 ATOM 73 CA SER 11 5.800 28.144 4.857 1.00 0.00 ATOM 74 C SER 11 6.629 28.594 6.112 1.00 0.00 ATOM 75 O SER 11 6.407 27.981 7.157 1.00 0.00 ATOM 76 CB SER 11 6.650 27.744 3.644 1.00 0.00 ATOM 77 OG SER 11 7.205 28.804 2.890 1.00 0.00 ATOM 78 N TYR 12 7.502 29.636 6.027 1.00 0.00 ATOM 79 CA TYR 12 8.265 30.113 7.219 1.00 0.00 ATOM 80 C TYR 12 7.256 30.559 8.298 1.00 0.00 ATOM 81 O TYR 12 7.468 30.135 9.441 1.00 0.00 ATOM 82 CB TYR 12 9.237 31.149 6.763 1.00 0.00 ATOM 83 CG TYR 12 10.521 31.009 6.063 1.00 0.00 ATOM 84 CD1 TYR 12 11.457 30.020 6.420 1.00 0.00 ATOM 85 CD2 TYR 12 10.815 31.887 5.014 1.00 0.00 ATOM 86 CE1 TYR 12 12.654 29.991 5.705 1.00 0.00 ATOM 87 CE2 TYR 12 11.996 31.864 4.294 1.00 0.00 ATOM 88 CZ TYR 12 12.906 30.873 4.646 1.00 0.00 ATOM 89 OH TYR 12 14.101 30.792 3.977 1.00 0.00 ATOM 90 N VAL 13 6.390 31.589 8.051 1.00 0.00 ATOM 91 CA VAL 13 5.403 31.875 9.064 1.00 0.00 ATOM 92 C VAL 13 4.584 30.530 9.130 1.00 0.00 ATOM 93 O VAL 13 4.229 30.081 8.064 1.00 0.00 ATOM 94 CB VAL 13 4.465 33.036 8.729 1.00 0.00 ATOM 95 CG1 VAL 13 3.736 32.989 7.402 1.00 0.00 ATOM 96 CG2 VAL 13 3.564 33.480 9.895 1.00 0.00 ATOM 97 N ALA 14 3.888 30.276 10.163 1.00 0.00 ATOM 98 CA ALA 14 3.191 28.987 10.452 1.00 0.00 ATOM 99 C ALA 14 4.004 28.020 11.416 1.00 0.00 ATOM 100 O ALA 14 3.492 26.997 11.842 1.00 0.00 ATOM 101 CB ALA 14 2.825 28.184 9.188 1.00 0.00 ATOM 102 N GLU 15 5.055 28.620 12.044 1.00 0.00 ATOM 103 CA GLU 15 5.976 28.131 13.116 1.00 0.00 ATOM 104 C GLU 15 5.824 29.267 14.084 1.00 0.00 ATOM 105 O GLU 15 6.593 30.242 13.812 1.00 0.00 ATOM 106 CB GLU 15 7.394 27.870 12.632 1.00 0.00 ATOM 107 CG GLU 15 7.642 26.612 11.886 1.00 0.00 ATOM 108 CD GLU 15 9.112 26.277 11.987 1.00 0.00 ATOM 109 OE1 GLU 15 9.863 26.239 11.016 1.00 0.00 ATOM 110 OE2 GLU 15 9.436 26.067 13.185 1.00 0.00 ATOM 111 N THR 16 5.411 29.099 15.335 1.00 0.00 ATOM 112 CA THR 16 5.132 30.328 16.001 1.00 0.00 ATOM 113 C THR 16 5.687 30.520 17.450 1.00 0.00 ATOM 114 O THR 16 5.766 31.687 17.853 1.00 0.00 ATOM 115 CB THR 16 3.628 30.234 16.091 1.00 0.00 ATOM 116 OG1 THR 16 3.093 29.151 16.798 1.00 0.00 ATOM 117 CG2 THR 16 2.815 30.296 14.708 1.00 0.00 ATOM 118 N GLY 17 6.480 29.556 18.001 1.00 0.00 ATOM 119 CA GLY 17 6.992 29.650 19.407 1.00 0.00 ATOM 120 C GLY 17 5.727 29.388 20.245 1.00 0.00 ATOM 121 O GLY 17 5.068 30.341 20.672 1.00 0.00 ATOM 122 N GLN 18 5.344 28.082 20.245 1.00 0.00 ATOM 123 CA GLN 18 4.114 27.596 20.761 1.00 0.00 ATOM 124 C GLN 18 3.092 27.810 19.632 1.00 0.00 ATOM 125 O GLN 18 2.792 28.989 19.349 1.00 0.00 ATOM 126 CB GLN 18 3.684 28.248 22.078 1.00 0.00 ATOM 127 CG GLN 18 4.634 27.942 23.197 1.00 0.00 ATOM 128 CD GLN 18 4.047 28.316 24.546 1.00 0.00 ATOM 129 OE1 GLN 18 3.960 27.440 25.414 1.00 0.00 ATOM 130 NE2 GLN 18 3.655 29.577 24.702 1.00 0.00 ATOM 131 N ASN 19 3.162 26.821 18.698 1.00 0.00 ATOM 132 CA ASN 19 2.417 26.660 17.405 1.00 0.00 ATOM 133 C ASN 19 1.015 27.173 17.473 1.00 0.00 ATOM 134 O ASN 19 0.558 27.683 16.447 1.00 0.00 ATOM 135 CB ASN 19 2.529 25.178 17.046 1.00 0.00 ATOM 136 CG ASN 19 1.980 24.853 15.667 1.00 0.00 ATOM 137 OD1 ASN 19 0.764 24.785 15.412 1.00 0.00 ATOM 138 ND2 ASN 19 2.867 24.487 14.808 1.00 0.00 ATOM 139 N TRP 20 0.313 26.921 18.568 1.00 0.00 ATOM 140 CA TRP 20 -0.991 27.477 18.690 1.00 0.00 ATOM 141 C TRP 20 -0.887 29.014 18.781 1.00 0.00 ATOM 142 O TRP 20 -1.925 29.641 18.498 1.00 0.00 ATOM 143 CB TRP 20 -1.779 26.868 19.828 1.00 0.00 ATOM 144 CG TRP 20 -1.840 25.383 19.768 1.00 0.00 ATOM 145 CD1 TRP 20 -0.827 24.453 19.877 1.00 0.00 ATOM 146 CD2 TRP 20 -3.040 24.610 19.514 1.00 0.00 ATOM 147 NE1 TRP 20 -1.288 23.162 19.769 1.00 0.00 ATOM 148 CE2 TRP 20 -2.680 23.265 19.473 1.00 0.00 ATOM 149 CE3 TRP 20 -4.374 24.981 19.342 1.00 0.00 ATOM 150 CZ2 TRP 20 -3.603 22.237 19.315 1.00 0.00 ATOM 151 CZ3 TRP 20 -5.310 24.004 19.165 1.00 0.00 ATOM 152 CH2 TRP 20 -4.927 22.649 19.042 1.00 0.00 ATOM 153 N ALA 21 0.056 29.520 19.593 1.00 0.00 ATOM 154 CA ALA 21 0.288 30.893 19.739 1.00 0.00 ATOM 155 C ALA 21 0.554 31.644 18.397 1.00 0.00 ATOM 156 O ALA 21 -0.155 32.672 18.261 1.00 0.00 ATOM 157 CB ALA 21 1.417 31.114 20.764 1.00 0.00 ATOM 158 N SER 22 1.609 31.464 17.575 1.00 0.00 ATOM 159 CA SER 22 1.612 32.352 16.380 1.00 0.00 ATOM 160 C SER 22 0.437 31.903 15.426 1.00 0.00 ATOM 161 O SER 22 0.242 32.617 14.464 1.00 0.00 ATOM 162 CB SER 22 2.955 32.846 15.800 1.00 0.00 ATOM 163 OG SER 22 3.036 33.111 14.447 1.00 0.00 ATOM 164 N LEU 23 0.030 30.606 15.366 1.00 0.00 ATOM 165 CA LEU 23 -1.130 30.257 14.553 1.00 0.00 ATOM 166 C LEU 23 -2.312 31.184 15.005 1.00 0.00 ATOM 167 O LEU 23 -3.178 31.458 14.177 1.00 0.00 ATOM 168 CB LEU 23 -1.511 28.786 14.632 1.00 0.00 ATOM 169 CG LEU 23 -1.376 27.910 13.424 1.00 0.00 ATOM 170 CD1 LEU 23 -0.297 28.446 12.502 1.00 0.00 ATOM 171 CD2 LEU 23 -1.060 26.461 13.807 1.00 0.00 ATOM 172 N ALA 24 -2.404 31.563 16.306 1.00 0.00 ATOM 173 CA ALA 24 -3.369 32.490 16.873 1.00 0.00 ATOM 174 C ALA 24 -3.002 33.919 16.361 1.00 0.00 ATOM 175 O ALA 24 -3.939 34.656 16.054 1.00 0.00 ATOM 176 CB ALA 24 -3.432 32.368 18.403 1.00 0.00 ATOM 177 N ALA 25 -1.711 34.323 16.411 1.00 0.00 ATOM 178 CA ALA 25 -1.176 35.549 15.904 1.00 0.00 ATOM 179 C ALA 25 -1.510 35.696 14.389 1.00 0.00 ATOM 180 O ALA 25 -1.743 36.832 13.996 1.00 0.00 ATOM 181 CB ALA 25 0.322 35.612 16.239 1.00 0.00 ATOM 182 N ASN 26 -1.152 34.730 13.509 1.00 0.00 ATOM 183 CA ASN 26 -1.506 34.736 12.118 1.00 0.00 ATOM 184 C ASN 26 -3.022 35.042 11.971 1.00 0.00 ATOM 185 O ASN 26 -3.341 35.919 11.128 1.00 0.00 ATOM 186 CB ASN 26 -1.289 33.312 11.524 1.00 0.00 ATOM 187 CG ASN 26 -1.448 33.348 10.004 1.00 0.00 ATOM 188 OD1 ASN 26 -1.514 34.357 9.295 1.00 0.00 ATOM 189 ND2 ASN 26 -1.489 32.163 9.437 1.00 0.00 ATOM 190 N GLU 27 -3.951 34.216 12.503 1.00 0.00 ATOM 191 CA GLU 27 -5.399 34.375 12.414 1.00 0.00 ATOM 192 C GLU 27 -5.780 35.821 12.827 1.00 0.00 ATOM 193 O GLU 27 -6.576 36.408 12.077 1.00 0.00 ATOM 194 CB GLU 27 -6.099 33.319 13.281 1.00 0.00 ATOM 195 CG GLU 27 -6.047 31.937 12.659 1.00 0.00 ATOM 196 CD GLU 27 -6.887 31.840 11.418 1.00 0.00 ATOM 197 OE1 GLU 27 -7.852 32.537 11.183 1.00 0.00 ATOM 198 OE2 GLU 27 -6.491 30.978 10.608 1.00 0.00 ATOM 199 N LEU 28 -5.466 36.290 14.051 1.00 0.00 ATOM 200 CA LEU 28 -5.692 37.642 14.524 1.00 0.00 ATOM 201 C LEU 28 -5.141 38.712 13.520 1.00 0.00 ATOM 202 O LEU 28 -5.882 39.650 13.292 1.00 0.00 ATOM 203 CB LEU 28 -5.007 37.771 15.884 1.00 0.00 ATOM 204 CG LEU 28 -5.621 37.078 17.063 1.00 0.00 ATOM 205 CD1 LEU 28 -4.687 37.192 18.261 1.00 0.00 ATOM 206 CD2 LEU 28 -7.021 37.616 17.364 1.00 0.00 ATOM 207 N ARG 29 -3.849 38.683 13.081 1.00 0.00 ATOM 208 CA ARG 29 -3.254 39.639 12.121 1.00 0.00 ATOM 209 C ARG 29 -4.255 39.913 10.968 1.00 0.00 ATOM 210 O ARG 29 -4.325 41.081 10.582 1.00 0.00 ATOM 211 CB ARG 29 -1.974 39.089 11.456 1.00 0.00 ATOM 212 CG ARG 29 -1.345 40.040 10.452 1.00 0.00 ATOM 213 CD ARG 29 -0.118 39.496 9.837 1.00 0.00 ATOM 214 NE ARG 29 -0.419 38.253 9.104 1.00 0.00 ATOM 215 CZ ARG 29 -0.885 38.194 7.881 1.00 0.00 ATOM 216 NH1 ARG 29 -1.068 37.030 7.256 1.00 0.00 ATOM 217 NH2 ARG 29 -1.275 39.314 7.256 1.00 0.00 ATOM 218 N VAL 30 -4.702 38.900 10.179 1.00 0.00 ATOM 219 CA VAL 30 -5.701 39.024 9.160 1.00 0.00 ATOM 220 C VAL 30 -6.886 39.930 9.623 1.00 0.00 ATOM 221 O VAL 30 -7.263 40.807 8.833 1.00 0.00 ATOM 222 CB VAL 30 -6.152 37.608 8.718 1.00 0.00 ATOM 223 CG1 VAL 30 -7.347 37.571 7.727 1.00 0.00 ATOM 224 CG2 VAL 30 -4.948 36.773 8.245 1.00 0.00 ATOM 225 N THR 31 -7.438 39.768 10.790 1.00 0.00 ATOM 226 CA THR 31 -8.512 40.600 11.424 1.00 0.00 ATOM 227 C THR 31 -8.029 41.752 12.388 1.00 0.00 ATOM 228 O THR 31 -8.829 42.160 13.252 1.00 0.00 ATOM 229 CB THR 31 -9.666 39.771 12.070 1.00 0.00 ATOM 230 OG1 THR 31 -9.166 39.087 13.314 1.00 0.00 ATOM 231 CG2 THR 31 -10.450 38.968 11.086 1.00 0.00 ATOM 232 N GLU 32 -6.760 42.223 12.347 1.00 0.00 ATOM 233 CA GLU 32 -6.291 43.351 13.138 1.00 0.00 ATOM 234 C GLU 32 -7.281 44.556 13.106 1.00 0.00 ATOM 235 O GLU 32 -7.293 45.261 14.111 1.00 0.00 ATOM 236 CB GLU 32 -4.945 43.837 12.607 1.00 0.00 ATOM 237 CG GLU 32 -3.687 43.125 12.952 1.00 0.00 ATOM 238 CD GLU 32 -2.493 43.933 12.473 1.00 0.00 ATOM 239 OE1 GLU 32 -1.740 43.503 11.632 1.00 0.00 ATOM 240 OE2 GLU 32 -2.501 45.066 13.042 1.00 0.00 ATOM 241 N ARG 33 -7.989 44.859 11.993 1.00 0.00 ATOM 242 CA ARG 33 -8.907 46.026 11.815 1.00 0.00 ATOM 243 C ARG 33 -10.109 46.147 12.847 1.00 0.00 ATOM 244 O ARG 33 -10.017 47.039 13.699 1.00 0.00 ATOM 245 CB ARG 33 -9.423 45.961 10.381 1.00 0.00 ATOM 246 CG ARG 33 -8.307 45.794 9.310 1.00 0.00 ATOM 247 CD ARG 33 -8.734 44.649 8.443 1.00 0.00 ATOM 248 NE ARG 33 -10.121 44.738 8.080 1.00 0.00 ATOM 249 CZ ARG 33 -11.070 43.995 7.567 1.00 0.00 ATOM 250 NH1 ARG 33 -12.325 44.497 7.401 1.00 0.00 ATOM 251 NH2 ARG 33 -11.030 42.756 7.259 1.00 0.00 ATOM 252 N PRO 34 -11.126 45.240 12.967 1.00 0.00 ATOM 253 CA PRO 34 -12.076 45.408 13.986 1.00 0.00 ATOM 254 C PRO 34 -11.485 45.071 15.351 1.00 0.00 ATOM 255 O PRO 34 -12.329 44.940 16.299 1.00 0.00 ATOM 256 CB PRO 34 -13.240 44.417 13.769 1.00 0.00 ATOM 257 CG PRO 34 -12.605 43.321 12.881 1.00 0.00 ATOM 258 CD PRO 34 -11.363 43.905 12.252 1.00 0.00 ATOM 259 N PHE 35 -10.187 44.701 15.581 1.00 0.00 ATOM 260 CA PHE 35 -9.805 44.462 16.933 1.00 0.00 ATOM 261 C PHE 35 -10.063 45.660 17.851 1.00 0.00 ATOM 262 O PHE 35 -9.455 46.730 17.692 1.00 0.00 ATOM 263 CB PHE 35 -8.380 43.858 17.188 1.00 0.00 ATOM 264 CG PHE 35 -8.176 42.519 16.548 1.00 0.00 ATOM 265 CD1 PHE 35 -9.162 41.540 16.592 1.00 0.00 ATOM 266 CD2 PHE 35 -6.958 42.218 15.957 1.00 0.00 ATOM 267 CE1 PHE 35 -8.930 40.290 16.044 1.00 0.00 ATOM 268 CE2 PHE 35 -6.750 40.960 15.417 1.00 0.00 ATOM 269 CZ PHE 35 -7.722 39.997 15.456 1.00 0.00 ATOM 270 N TRP 36 -10.919 45.354 18.832 1.00 0.00 ATOM 271 CA TRP 36 -11.140 46.287 19.901 1.00 0.00 ATOM 272 C TRP 36 -9.807 46.223 20.718 1.00 0.00 ATOM 273 O TRP 36 -9.481 45.120 21.196 1.00 0.00 ATOM 274 CB TRP 36 -12.373 45.890 20.709 1.00 0.00 ATOM 275 CG TRP 36 -13.679 46.151 20.049 1.00 0.00 ATOM 276 CD1 TRP 36 -14.360 45.172 19.356 1.00 0.00 ATOM 277 CD2 TRP 36 -14.363 47.345 20.086 1.00 0.00 ATOM 278 NE1 TRP 36 -15.479 45.741 18.966 1.00 0.00 ATOM 279 CE2 TRP 36 -15.524 47.031 19.365 1.00 0.00 ATOM 280 CE3 TRP 36 -14.148 48.612 20.610 1.00 0.00 ATOM 281 CZ2 TRP 36 -16.502 47.992 19.174 1.00 0.00 ATOM 282 CZ3 TRP 36 -15.128 49.571 20.410 1.00 0.00 ATOM 283 CH2 TRP 36 -16.279 49.263 19.703 1.00 0.00 ATOM 284 N ILE 37 -9.338 47.283 21.262 1.00 0.00 ATOM 285 CA ILE 37 -8.056 47.384 21.963 1.00 0.00 ATOM 286 C ILE 37 -7.962 47.015 23.492 1.00 0.00 ATOM 287 O ILE 37 -7.850 47.907 24.337 1.00 0.00 ATOM 288 CB ILE 37 -7.495 48.785 21.494 1.00 0.00 ATOM 289 CG1 ILE 37 -7.316 48.643 19.897 1.00 0.00 ATOM 290 CG2 ILE 37 -6.048 48.971 21.939 1.00 0.00 ATOM 291 CD1 ILE 37 -6.377 49.858 19.705 1.00 0.00 ATOM 292 N SER 38 -7.918 45.690 23.782 1.00 0.00 ATOM 293 CA SER 38 -7.644 45.079 25.102 1.00 0.00 ATOM 294 C SER 38 -8.148 45.876 26.369 1.00 0.00 ATOM 295 O SER 38 -7.291 46.208 27.199 1.00 0.00 ATOM 296 CB SER 38 -6.177 44.802 25.102 1.00 0.00 ATOM 297 OG SER 38 -5.634 43.820 25.900 1.00 0.00 ATOM 298 N SER 39 -9.359 46.281 26.463 1.00 0.00 ATOM 299 CA SER 39 -9.926 46.934 27.653 1.00 0.00 ATOM 300 C SER 39 -9.573 48.454 27.806 1.00 0.00 ATOM 301 O SER 39 -10.529 49.242 27.675 1.00 0.00 ATOM 302 CB SER 39 -9.633 46.086 28.909 1.00 0.00 ATOM 303 OG SER 39 -10.059 46.571 30.154 1.00 0.00 ATOM 304 N PHE 40 -8.331 48.859 28.133 1.00 0.00 ATOM 305 CA PHE 40 -8.107 50.322 28.259 1.00 0.00 ATOM 306 C PHE 40 -6.744 50.841 27.667 1.00 0.00 ATOM 307 O PHE 40 -6.658 52.062 27.496 1.00 0.00 ATOM 308 CB PHE 40 -8.401 50.776 29.692 1.00 0.00 ATOM 309 CG PHE 40 -7.352 50.148 30.630 1.00 0.00 ATOM 310 CD1 PHE 40 -6.262 50.896 31.083 1.00 0.00 ATOM 311 CD2 PHE 40 -7.509 48.842 31.083 1.00 0.00 ATOM 312 CE1 PHE 40 -5.326 50.362 31.958 1.00 0.00 ATOM 313 CE2 PHE 40 -6.591 48.291 31.974 1.00 0.00 ATOM 314 CZ PHE 40 -5.500 49.051 32.403 1.00 0.00 ATOM 315 N ILE 41 -5.811 49.985 27.172 1.00 0.00 ATOM 316 CA ILE 41 -4.545 50.553 26.681 1.00 0.00 ATOM 317 C ILE 41 -4.754 50.781 25.170 1.00 0.00 ATOM 318 O ILE 41 -5.154 49.846 24.460 1.00 0.00 ATOM 319 CB ILE 41 -3.283 49.683 27.020 1.00 0.00 ATOM 320 CG1 ILE 41 -3.233 49.551 28.568 1.00 0.00 ATOM 321 CG2 ILE 41 -1.992 50.373 26.471 1.00 0.00 ATOM 322 CD1 ILE 41 -3.778 48.235 29.144 1.00 0.00 ATOM 323 N GLY 42 -4.587 52.024 24.708 1.00 0.00 ATOM 324 CA GLY 42 -4.673 52.318 23.268 1.00 0.00 ATOM 325 C GLY 42 -3.792 51.356 22.429 1.00 0.00 ATOM 326 O GLY 42 -4.052 51.297 21.223 1.00 0.00 ATOM 327 N ARG 43 -2.573 51.060 22.888 1.00 0.00 ATOM 328 CA ARG 43 -1.642 50.138 22.266 1.00 0.00 ATOM 329 C ARG 43 -1.734 48.654 22.788 1.00 0.00 ATOM 330 O ARG 43 -1.080 47.817 22.154 1.00 0.00 ATOM 331 CB ARG 43 -0.244 50.706 22.529 1.00 0.00 ATOM 332 CG ARG 43 -0.060 52.055 21.832 1.00 0.00 ATOM 333 CD ARG 43 1.282 52.230 21.179 1.00 0.00 ATOM 334 NE ARG 43 2.328 52.242 22.158 1.00 0.00 ATOM 335 CZ ARG 43 3.574 51.869 21.854 1.00 0.00 ATOM 336 NH1 ARG 43 3.978 51.441 20.657 1.00 0.00 ATOM 337 NH2 ARG 43 4.428 51.925 22.839 1.00 0.00 ATOM 338 N SER 44 -2.548 48.312 23.816 1.00 0.00 ATOM 339 CA SER 44 -2.503 46.941 24.304 1.00 0.00 ATOM 340 C SER 44 -2.979 45.925 23.197 1.00 0.00 ATOM 341 O SER 44 -2.193 45.005 22.944 1.00 0.00 ATOM 342 CB SER 44 -3.174 46.772 25.674 1.00 0.00 ATOM 343 OG SER 44 -3.046 45.466 26.266 1.00 0.00 ATOM 344 N LYS 45 -4.191 46.053 22.585 1.00 0.00 ATOM 345 CA LYS 45 -4.638 45.052 21.605 1.00 0.00 ATOM 346 C LYS 45 -4.594 43.620 22.202 1.00 0.00 ATOM 347 O LYS 45 -5.611 43.267 22.824 1.00 0.00 ATOM 348 CB LYS 45 -3.731 45.184 20.441 1.00 0.00 ATOM 349 CG LYS 45 -3.578 46.388 19.612 1.00 0.00 ATOM 350 CD LYS 45 -4.695 46.722 18.705 1.00 0.00 ATOM 351 CE LYS 45 -4.163 48.025 18.079 1.00 0.00 ATOM 352 NZ LYS 45 -4.980 48.509 16.979 1.00 0.00 TER END