####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS047_3-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS047_3-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 19 5 - 23 4.93 17.68 LCS_AVERAGE: 39.82 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 20 - 27 0.38 21.64 LONGEST_CONTINUOUS_SEGMENT: 8 28 - 35 1.93 18.48 LCS_AVERAGE: 14.57 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 20 - 27 0.38 21.64 LCS_AVERAGE: 11.16 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 3 16 3 3 3 3 3 4 4 7 10 13 16 17 19 23 25 26 30 31 33 34 LCS_GDT V 3 V 3 3 6 16 3 3 3 4 6 7 9 11 13 16 17 18 20 24 25 26 30 31 33 34 LCS_GDT Q 4 Q 4 3 6 16 3 3 5 7 8 8 9 11 13 16 17 18 20 24 25 26 30 31 33 34 LCS_GDT G 5 G 5 4 6 19 0 4 6 7 7 8 9 10 12 16 17 18 20 24 25 26 30 31 33 34 LCS_GDT P 6 P 6 4 6 19 3 5 6 7 8 8 9 11 13 16 17 18 20 24 25 26 30 31 33 34 LCS_GDT W 7 W 7 4 6 19 3 5 6 7 8 8 9 11 13 16 17 18 20 24 25 26 30 31 33 34 LCS_GDT V 8 V 8 4 6 19 3 5 6 7 8 8 9 11 13 16 17 18 20 24 25 26 30 31 33 34 LCS_GDT G 9 G 9 4 5 19 3 4 4 6 7 8 9 11 12 15 17 18 20 24 25 26 30 31 33 34 LCS_GDT S 10 S 10 4 5 19 4 4 4 4 5 6 8 11 11 13 16 17 20 24 25 26 30 31 33 34 LCS_GDT S 11 S 11 4 5 19 4 4 4 4 5 6 8 11 11 12 15 16 18 21 24 26 30 31 33 34 LCS_GDT Y 12 Y 12 4 5 19 4 4 4 4 5 6 7 11 11 11 12 17 18 19 23 26 29 31 33 34 LCS_GDT V 13 V 13 4 5 19 4 4 4 4 5 6 8 11 11 14 16 17 20 24 25 26 30 31 33 34 LCS_GDT A 14 A 14 4 5 19 3 4 4 4 5 6 8 11 11 13 16 17 18 22 24 26 30 31 33 34 LCS_GDT E 15 E 15 4 5 19 3 4 4 4 5 6 8 11 11 13 15 17 18 21 24 25 25 26 30 34 LCS_GDT T 16 T 16 4 5 19 3 4 4 4 5 6 8 11 11 13 15 16 18 22 24 26 30 31 33 34 LCS_GDT G 17 G 17 4 5 19 3 4 4 4 5 6 8 11 12 14 16 18 20 24 25 26 30 31 33 34 LCS_GDT Q 18 Q 18 4 5 19 3 3 4 4 5 6 8 11 12 13 17 18 20 24 25 26 30 31 33 34 LCS_GDT N 19 N 19 4 5 19 3 3 4 4 5 6 9 11 12 16 17 18 20 24 25 26 28 31 33 34 LCS_GDT W 20 W 20 8 8 19 7 8 8 8 8 8 8 9 12 16 17 18 20 24 25 26 30 31 33 34 LCS_GDT A 21 A 21 8 8 19 7 8 8 8 8 8 9 11 13 16 17 18 20 20 23 26 30 31 33 34 LCS_GDT S 22 S 22 8 8 19 7 8 8 8 8 8 8 11 13 15 16 17 18 20 21 23 24 31 33 34 LCS_GDT L 23 L 23 8 8 19 7 8 8 8 8 8 8 11 13 16 17 18 20 24 25 26 30 31 33 34 LCS_GDT A 24 A 24 8 8 17 7 8 8 8 8 8 9 11 12 16 17 18 20 24 25 26 30 31 33 34 LCS_GDT A 25 A 25 8 8 17 7 8 8 8 8 8 8 10 11 14 15 17 18 20 23 26 30 31 33 34 LCS_GDT N 26 N 26 8 8 17 7 8 8 8 8 8 9 11 13 16 17 18 20 24 25 26 30 31 33 34 LCS_GDT E 27 E 27 8 8 17 7 8 8 8 8 8 9 11 13 16 17 18 20 24 25 26 30 31 33 34 LCS_GDT L 28 L 28 4 8 17 3 5 6 8 8 9 9 11 13 16 17 18 20 24 25 26 30 31 33 34 LCS_GDT R 29 R 29 4 8 17 3 5 6 8 8 9 9 11 13 16 17 18 20 24 25 26 30 31 33 34 LCS_GDT V 30 V 30 4 8 17 3 4 6 8 8 9 9 11 13 16 17 18 20 24 25 26 30 31 33 34 LCS_GDT T 31 T 31 4 8 17 3 4 6 8 8 9 9 11 11 12 14 15 16 18 24 26 29 31 33 34 LCS_GDT E 32 E 32 4 8 17 3 5 6 8 8 9 9 11 11 12 14 15 16 17 20 24 26 28 32 34 LCS_GDT R 33 R 33 4 8 17 3 5 6 6 7 9 9 11 11 12 13 15 16 17 18 21 22 27 28 31 LCS_GDT P 34 P 34 4 8 17 3 5 6 6 7 9 9 11 11 12 14 15 16 17 20 24 26 29 33 34 LCS_GDT F 35 F 35 4 8 16 3 5 6 6 7 9 9 11 12 14 16 18 20 24 25 26 30 31 33 34 LCS_GDT W 36 W 36 6 7 16 4 5 6 7 7 9 9 11 12 14 16 18 20 24 25 26 30 31 33 34 LCS_GDT I 37 I 37 6 7 16 4 5 6 7 7 7 9 11 11 12 16 17 19 22 25 26 30 31 33 34 LCS_GDT S 38 S 38 6 7 16 4 5 6 7 7 7 9 11 11 12 13 14 20 24 25 26 30 31 33 34 LCS_GDT S 39 S 39 6 7 16 4 5 6 7 7 7 9 11 11 12 13 17 20 24 25 26 30 31 33 34 LCS_GDT F 40 F 40 6 7 16 3 5 6 7 7 7 9 10 11 12 12 14 15 15 17 20 23 27 30 32 LCS_GDT I 41 I 41 6 7 16 3 5 6 7 7 7 8 10 11 12 12 14 15 15 17 18 21 27 30 32 LCS_GDT G 42 G 42 6 7 16 3 3 6 7 7 7 8 10 11 12 12 14 15 15 17 18 23 27 28 31 LCS_GDT R 43 R 43 3 4 16 3 3 3 4 5 7 8 10 11 12 12 14 15 15 17 18 20 25 28 30 LCS_GDT S 44 S 44 3 4 16 0 3 3 4 5 7 8 10 10 11 12 14 14 15 15 16 16 16 17 18 LCS_GDT K 45 K 45 3 3 15 0 3 3 3 5 7 8 9 9 11 11 11 11 15 15 15 15 15 17 18 LCS_AVERAGE LCS_A: 21.85 ( 11.16 14.57 39.82 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 8 8 8 8 9 9 11 13 16 17 18 20 24 25 26 30 31 33 34 GDT PERCENT_AT 15.91 18.18 18.18 18.18 18.18 20.45 20.45 25.00 29.55 36.36 38.64 40.91 45.45 54.55 56.82 59.09 68.18 70.45 75.00 77.27 GDT RMS_LOCAL 0.31 0.38 0.38 0.38 0.38 2.27 1.86 2.82 3.27 3.60 3.79 3.95 4.59 5.35 5.45 5.59 6.28 6.38 6.64 6.82 GDT RMS_ALL_AT 21.82 21.64 21.64 21.64 21.64 16.55 11.70 12.37 11.99 11.12 10.93 10.81 10.61 10.26 10.24 10.22 10.59 10.51 10.41 10.45 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 32 E 32 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 7.831 0 0.600 0.631 9.073 0.000 0.000 - LGA V 3 V 3 2.757 0 0.478 0.503 5.014 35.455 26.753 5.014 LGA Q 4 Q 4 1.776 0 0.658 1.234 5.477 42.727 27.071 4.228 LGA G 5 G 5 5.477 0 0.119 0.119 5.477 2.273 2.273 - LGA P 6 P 6 3.329 0 0.196 0.322 5.220 28.182 17.143 4.826 LGA W 7 W 7 2.138 0 0.357 0.713 4.917 33.182 19.870 3.506 LGA V 8 V 8 1.553 0 0.614 0.869 4.980 32.273 33.766 1.808 LGA G 9 G 9 8.094 0 0.559 0.559 10.307 0.000 0.000 - LGA S 10 S 10 12.225 0 0.695 0.804 13.825 0.000 0.000 10.995 LGA S 11 S 11 14.164 0 0.060 0.588 16.064 0.000 0.000 14.727 LGA Y 12 Y 12 14.780 0 0.048 1.052 16.557 0.000 0.000 14.638 LGA V 13 V 13 14.188 0 0.598 0.649 17.896 0.000 0.000 13.876 LGA A 14 A 14 18.279 0 0.603 0.595 19.146 0.000 0.000 - LGA E 15 E 15 17.566 0 0.116 0.743 19.200 0.000 0.000 18.379 LGA T 16 T 16 17.061 0 0.098 0.314 17.735 0.000 0.000 16.589 LGA G 17 G 17 15.181 0 0.659 0.659 15.619 0.000 0.000 - LGA Q 18 Q 18 9.186 0 0.638 1.411 12.562 0.000 0.000 12.562 LGA N 19 N 19 5.605 0 0.055 1.100 7.332 0.000 0.000 6.885 LGA W 20 W 20 7.606 0 0.624 1.302 15.865 0.000 0.000 13.980 LGA A 21 A 21 2.397 0 0.028 0.030 3.727 50.000 47.636 - LGA S 22 S 22 3.589 0 0.025 0.657 6.044 24.545 16.364 5.503 LGA L 23 L 23 4.901 0 0.064 0.124 11.640 9.091 4.545 11.640 LGA A 24 A 24 4.756 0 0.028 0.052 6.309 5.909 4.727 - LGA A 25 A 25 4.813 0 0.029 0.048 5.738 6.364 5.091 - LGA N 26 N 26 2.982 0 0.219 0.245 6.933 35.909 19.318 6.598 LGA E 27 E 27 3.190 0 0.393 0.549 8.876 36.364 16.162 7.141 LGA L 28 L 28 1.067 0 0.580 0.527 5.069 56.364 33.636 5.069 LGA R 29 R 29 4.468 0 0.421 1.402 7.323 8.182 8.099 3.048 LGA V 30 V 30 6.057 0 0.049 0.129 8.270 0.000 3.377 5.504 LGA T 31 T 31 12.276 0 0.666 0.582 15.432 0.000 0.000 14.114 LGA E 32 E 32 14.498 0 0.114 1.291 16.398 0.000 0.000 11.970 LGA R 33 R 33 20.247 0 0.587 1.157 25.107 0.000 0.000 25.107 LGA P 34 P 34 21.336 0 0.693 0.661 21.706 0.000 0.000 21.569 LGA F 35 F 35 16.260 0 0.605 1.449 18.652 0.000 0.000 15.841 LGA W 36 W 36 16.105 0 0.670 1.264 24.288 0.000 0.000 24.288 LGA I 37 I 37 16.918 0 0.031 0.309 19.309 0.000 0.000 19.309 LGA S 38 S 38 15.294 0 0.062 0.627 15.717 0.000 0.000 14.450 LGA S 39 S 39 14.960 0 0.072 0.135 15.616 0.000 0.000 15.441 LGA F 40 F 40 16.143 0 0.103 0.244 19.162 0.000 0.000 19.162 LGA I 41 I 41 15.490 0 0.483 1.240 17.682 0.000 0.000 17.636 LGA G 42 G 42 14.174 0 0.216 0.216 14.616 0.000 0.000 - LGA R 43 R 43 14.401 0 0.350 1.431 16.868 0.000 0.000 15.179 LGA S 44 S 44 19.283 0 0.680 0.575 21.474 0.000 0.000 17.549 LGA K 45 K 45 22.358 0 0.703 0.946 26.192 0.000 0.000 26.192 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 9.643 9.632 10.347 9.246 6.496 2.494 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 11 2.82 30.114 25.581 0.376 LGA_LOCAL RMSD: 2.822 Number of atoms: 11 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 12.370 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 9.643 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.460146 * X + 0.294686 * Y + -0.837511 * Z + 31.156038 Y_new = 0.798506 * X + 0.275028 * Y + 0.535488 * Z + 33.527176 Z_new = 0.388140 * X + -0.915161 * Y + -0.108755 * Z + -4.821520 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.048016 -0.398613 -1.689079 [DEG: 60.0469 -22.8388 -96.7771 ] ZXZ: -2.139669 1.679767 2.740466 [DEG: -122.5940 96.2436 157.0171 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS047_3-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS047_3-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 11 2.82 25.581 9.64 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS047_3-D1 PFRMAT TS TARGET T0953s2 MODEL 3 REFINED PARENT 2F00_A ATOM 9 N ALA 2 4.868 35.654 9.113 1.00 0.00 ATOM 10 CA ALA 2 4.403 36.955 8.592 1.00 0.00 ATOM 11 C ALA 2 5.414 38.120 8.756 1.00 0.00 ATOM 12 O ALA 2 4.908 39.266 8.854 1.00 0.00 ATOM 13 CB ALA 2 3.098 37.389 9.282 1.00 0.00 ATOM 14 N VAL 3 6.516 37.871 9.414 1.00 0.00 ATOM 15 CA VAL 3 7.539 38.926 9.494 1.00 0.00 ATOM 16 C VAL 3 8.795 38.507 8.772 1.00 0.00 ATOM 17 O VAL 3 8.997 38.912 7.634 1.00 0.00 ATOM 18 CB VAL 3 7.911 39.053 11.023 1.00 0.00 ATOM 19 CG1 VAL 3 8.920 40.239 11.217 1.00 0.00 ATOM 20 CG2 VAL 3 6.622 39.279 11.855 1.00 0.00 ATOM 21 N GLN 4 9.291 37.356 9.259 1.00 0.00 ATOM 22 CA GLN 4 10.485 36.713 8.850 1.00 0.00 ATOM 23 C GLN 4 10.209 35.647 7.788 1.00 0.00 ATOM 24 O GLN 4 11.083 35.512 6.928 1.00 0.00 ATOM 25 CB GLN 4 11.063 36.074 10.152 1.00 0.00 ATOM 26 CG GLN 4 12.167 35.061 9.990 1.00 0.00 ATOM 27 CD GLN 4 12.674 34.592 11.354 1.00 0.00 ATOM 28 OE1 GLN 4 13.778 34.935 11.771 1.00 0.00 ATOM 29 NE2 GLN 4 11.838 33.792 11.991 1.00 0.00 ATOM 30 N GLY 5 9.109 34.839 7.790 1.00 0.00 ATOM 31 CA GLY 5 8.955 33.896 6.637 1.00 0.00 ATOM 32 C GLY 5 8.834 34.900 5.412 1.00 0.00 ATOM 33 O GLY 5 8.125 35.940 5.553 1.00 0.00 ATOM 34 N PRO 6 9.491 34.657 4.268 1.00 0.00 ATOM 35 CA PRO 6 9.338 35.723 3.249 1.00 0.00 ATOM 36 C PRO 6 7.926 36.238 2.750 1.00 0.00 ATOM 37 O PRO 6 7.740 37.415 2.777 1.00 0.00 ATOM 38 CB PRO 6 10.327 35.282 2.130 1.00 0.00 ATOM 39 CG PRO 6 10.701 33.722 2.345 1.00 0.00 ATOM 40 CD PRO 6 10.250 33.364 3.743 1.00 0.00 ATOM 41 N TRP 7 6.954 35.411 2.350 1.00 0.00 ATOM 42 CA TRP 7 5.632 35.797 1.765 1.00 0.00 ATOM 43 C TRP 7 4.702 36.487 2.736 1.00 0.00 ATOM 44 O TRP 7 3.679 36.985 2.305 1.00 0.00 ATOM 45 CB TRP 7 4.922 34.538 1.215 1.00 0.00 ATOM 46 CG TRP 7 5.234 33.957 -0.116 1.00 0.00 ATOM 47 CD1 TRP 7 6.496 33.496 -0.421 1.00 0.00 ATOM 48 CD2 TRP 7 4.346 33.810 -1.148 1.00 0.00 ATOM 49 NE1 TRP 7 6.380 33.050 -1.663 1.00 0.00 ATOM 50 CE2 TRP 7 5.135 33.213 -2.124 1.00 0.00 ATOM 51 CE3 TRP 7 3.014 34.106 -1.354 1.00 0.00 ATOM 52 CZ2 TRP 7 4.584 32.914 -3.332 1.00 0.00 ATOM 53 CZ3 TRP 7 2.455 33.802 -2.574 1.00 0.00 ATOM 54 CH2 TRP 7 3.248 33.214 -3.550 1.00 0.00 ATOM 55 N VAL 8 4.817 36.101 3.944 1.00 0.00 ATOM 56 CA VAL 8 4.044 36.786 4.934 1.00 0.00 ATOM 57 C VAL 8 4.725 38.213 5.127 1.00 0.00 ATOM 58 O VAL 8 5.472 38.617 4.199 1.00 0.00 ATOM 59 CB VAL 8 3.783 35.917 6.159 1.00 0.00 ATOM 60 CG1 VAL 8 2.404 36.063 6.881 1.00 0.00 ATOM 61 CG2 VAL 8 4.076 34.428 5.928 1.00 0.00 ATOM 62 N GLY 9 4.708 38.911 6.267 1.00 0.00 ATOM 63 CA GLY 9 5.223 40.313 6.261 1.00 0.00 ATOM 64 C GLY 9 6.467 40.557 5.344 1.00 0.00 ATOM 65 O GLY 9 7.563 40.710 5.877 1.00 0.00 ATOM 66 N SER 10 6.068 41.337 4.356 1.00 0.00 ATOM 67 CA SER 10 6.777 41.880 3.213 1.00 0.00 ATOM 68 C SER 10 5.690 42.822 2.554 1.00 0.00 ATOM 69 O SER 10 4.495 42.502 2.595 1.00 0.00 ATOM 70 CB SER 10 7.304 40.751 2.298 1.00 0.00 ATOM 71 OG SER 10 6.994 40.881 0.906 1.00 0.00 ATOM 72 N SER 11 6.036 43.844 1.777 1.00 0.00 ATOM 73 CA SER 11 4.998 44.772 1.264 1.00 0.00 ATOM 74 C SER 11 3.888 44.074 0.371 1.00 0.00 ATOM 75 O SER 11 2.738 44.467 0.516 1.00 0.00 ATOM 76 CB SER 11 5.731 45.859 0.431 1.00 0.00 ATOM 77 OG SER 11 6.310 45.523 -0.857 1.00 0.00 ATOM 78 N TYR 12 4.232 43.182 -0.585 1.00 0.00 ATOM 79 CA TYR 12 3.289 42.432 -1.441 1.00 0.00 ATOM 80 C TYR 12 2.143 41.694 -0.671 1.00 0.00 ATOM 81 O TYR 12 1.037 41.622 -1.209 1.00 0.00 ATOM 82 CB TYR 12 4.149 41.448 -2.219 1.00 0.00 ATOM 83 CG TYR 12 3.410 40.664 -3.259 1.00 0.00 ATOM 84 CD1 TYR 12 3.080 41.208 -4.556 1.00 0.00 ATOM 85 CD2 TYR 12 2.954 39.377 -2.826 1.00 0.00 ATOM 86 CE1 TYR 12 2.296 40.458 -5.425 1.00 0.00 ATOM 87 CE2 TYR 12 2.135 38.653 -3.698 1.00 0.00 ATOM 88 CZ TYR 12 1.852 39.188 -4.953 1.00 0.00 ATOM 89 OH TYR 12 1.093 38.365 -5.727 1.00 0.00 ATOM 90 N VAL 13 2.380 41.180 0.558 1.00 0.00 ATOM 91 CA VAL 13 1.434 40.470 1.399 1.00 0.00 ATOM 92 C VAL 13 0.128 41.263 1.572 1.00 0.00 ATOM 93 O VAL 13 0.190 42.462 1.933 1.00 0.00 ATOM 94 CB VAL 13 2.110 40.395 2.798 1.00 0.00 ATOM 95 CG1 VAL 13 1.195 39.474 3.738 1.00 0.00 ATOM 96 CG2 VAL 13 3.536 39.727 2.704 1.00 0.00 ATOM 97 N ALA 14 -1.021 40.603 1.466 1.00 0.00 ATOM 98 CA ALA 14 -2.280 41.252 1.692 1.00 0.00 ATOM 99 C ALA 14 -2.821 40.939 3.119 1.00 0.00 ATOM 100 O ALA 14 -2.505 39.892 3.697 1.00 0.00 ATOM 101 CB ALA 14 -3.270 40.769 0.618 1.00 0.00 ATOM 102 N GLU 15 -3.477 41.904 3.745 1.00 0.00 ATOM 103 CA GLU 15 -4.090 41.745 5.046 1.00 0.00 ATOM 104 C GLU 15 -5.056 40.528 5.163 1.00 0.00 ATOM 105 O GLU 15 -5.371 40.127 6.298 1.00 0.00 ATOM 106 CB GLU 15 -4.910 42.953 5.295 1.00 0.00 ATOM 107 CG GLU 15 -4.704 44.343 5.718 1.00 0.00 ATOM 108 CD GLU 15 -3.457 44.803 6.357 1.00 0.00 ATOM 109 OE1 GLU 15 -2.580 45.386 5.748 1.00 0.00 ATOM 110 OE2 GLU 15 -3.356 44.563 7.572 1.00 0.00 ATOM 111 N THR 16 -5.573 39.962 4.040 1.00 0.00 ATOM 112 CA THR 16 -6.478 38.818 3.996 1.00 0.00 ATOM 113 C THR 16 -5.733 37.466 3.840 1.00 0.00 ATOM 114 O THR 16 -6.470 36.465 3.761 1.00 0.00 ATOM 115 CB THR 16 -7.617 39.071 3.007 1.00 0.00 ATOM 116 OG1 THR 16 -7.395 38.416 1.708 1.00 0.00 ATOM 117 CG2 THR 16 -8.049 40.529 2.652 1.00 0.00 ATOM 118 N GLY 17 -4.434 37.325 4.123 1.00 0.00 ATOM 119 CA GLY 17 -3.704 36.082 3.901 1.00 0.00 ATOM 120 C GLY 17 -4.112 35.045 4.974 1.00 0.00 ATOM 121 O GLY 17 -4.411 35.426 6.122 1.00 0.00 ATOM 122 N GLN 18 -3.799 33.819 4.674 1.00 0.00 ATOM 123 CA GLN 18 -4.045 32.724 5.603 1.00 0.00 ATOM 124 C GLN 18 -3.130 32.835 6.852 1.00 0.00 ATOM 125 O GLN 18 -3.651 32.556 7.917 1.00 0.00 ATOM 126 CB GLN 18 -3.843 31.418 4.863 1.00 0.00 ATOM 127 CG GLN 18 -5.041 30.838 4.211 1.00 0.00 ATOM 128 CD GLN 18 -4.693 29.456 3.671 1.00 0.00 ATOM 129 OE1 GLN 18 -4.961 29.197 2.479 1.00 0.00 ATOM 130 NE2 GLN 18 -3.885 28.692 4.453 1.00 0.00 ATOM 131 N ASN 19 -1.800 32.926 6.681 1.00 0.00 ATOM 132 CA ASN 19 -0.814 33.051 7.749 1.00 0.00 ATOM 133 C ASN 19 -1.003 34.365 8.543 1.00 0.00 ATOM 134 O ASN 19 -0.565 34.361 9.677 1.00 0.00 ATOM 135 CB ASN 19 0.588 32.925 7.054 1.00 0.00 ATOM 136 CG ASN 19 1.007 31.434 6.977 1.00 0.00 ATOM 137 OD1 ASN 19 0.655 30.615 7.832 1.00 0.00 ATOM 138 ND2 ASN 19 1.745 31.134 5.899 1.00 0.00 ATOM 139 N TRP 20 -1.112 35.534 7.891 1.00 0.00 ATOM 140 CA TRP 20 -1.355 36.808 8.596 1.00 0.00 ATOM 141 C TRP 20 -2.560 36.646 9.571 1.00 0.00 ATOM 142 O TRP 20 -2.437 37.150 10.695 1.00 0.00 ATOM 143 CB TRP 20 -1.634 37.949 7.607 1.00 0.00 ATOM 144 CG TRP 20 -1.865 39.280 8.268 1.00 0.00 ATOM 145 CD1 TRP 20 -0.894 40.206 8.618 1.00 0.00 ATOM 146 CD2 TRP 20 -3.115 39.808 8.748 1.00 0.00 ATOM 147 NE1 TRP 20 -1.504 41.288 9.215 1.00 0.00 ATOM 148 CE2 TRP 20 -2.860 41.085 9.277 1.00 0.00 ATOM 149 CE3 TRP 20 -4.431 39.335 8.693 1.00 0.00 ATOM 150 CZ2 TRP 20 -3.853 41.868 9.800 1.00 0.00 ATOM 151 CZ3 TRP 20 -5.449 40.130 9.199 1.00 0.00 ATOM 152 CH2 TRP 20 -5.155 41.379 9.752 1.00 0.00 ATOM 153 N ALA 21 -3.757 36.184 9.110 1.00 0.00 ATOM 154 CA ALA 21 -4.935 35.908 9.942 1.00 0.00 ATOM 155 C ALA 21 -4.593 34.804 10.998 1.00 0.00 ATOM 156 O ALA 21 -5.119 34.928 12.098 1.00 0.00 ATOM 157 CB ALA 21 -6.112 35.499 9.040 1.00 0.00 ATOM 158 N SER 22 -3.967 33.684 10.625 1.00 0.00 ATOM 159 CA SER 22 -3.541 32.661 11.566 1.00 0.00 ATOM 160 C SER 22 -2.625 33.279 12.661 1.00 0.00 ATOM 161 O SER 22 -2.791 32.885 13.826 1.00 0.00 ATOM 162 CB SER 22 -2.895 31.471 10.840 1.00 0.00 ATOM 163 OG SER 22 -3.800 30.614 10.145 1.00 0.00 ATOM 164 N LEU 23 -1.548 34.009 12.308 1.00 0.00 ATOM 165 CA LEU 23 -0.728 34.672 13.287 1.00 0.00 ATOM 166 C LEU 23 -1.552 35.656 14.201 1.00 0.00 ATOM 167 O LEU 23 -1.329 35.603 15.400 1.00 0.00 ATOM 168 CB LEU 23 0.608 35.248 12.731 1.00 0.00 ATOM 169 CG LEU 23 1.539 34.413 11.866 1.00 0.00 ATOM 170 CD1 LEU 23 2.419 35.374 11.199 1.00 0.00 ATOM 171 CD2 LEU 23 2.271 33.432 12.742 1.00 0.00 ATOM 172 N ALA 24 -2.694 36.244 13.758 1.00 0.00 ATOM 173 CA ALA 24 -3.531 37.126 14.577 1.00 0.00 ATOM 174 C ALA 24 -4.322 36.300 15.649 1.00 0.00 ATOM 175 O ALA 24 -4.405 36.793 16.781 1.00 0.00 ATOM 176 CB ALA 24 -4.408 37.953 13.633 1.00 0.00 ATOM 177 N ALA 25 -5.164 35.331 15.239 1.00 0.00 ATOM 178 CA ALA 25 -5.900 34.422 16.121 1.00 0.00 ATOM 179 C ALA 25 -4.947 33.823 17.232 1.00 0.00 ATOM 180 O ALA 25 -5.362 33.803 18.401 1.00 0.00 ATOM 181 CB ALA 25 -6.564 33.342 15.253 1.00 0.00 ATOM 182 N ASN 26 -3.770 33.289 16.857 1.00 0.00 ATOM 183 CA ASN 26 -2.798 32.741 17.778 1.00 0.00 ATOM 184 C ASN 26 -1.982 33.803 18.591 1.00 0.00 ATOM 185 O ASN 26 -1.126 33.338 19.381 1.00 0.00 ATOM 186 CB ASN 26 -1.815 32.013 16.938 1.00 0.00 ATOM 187 CG ASN 26 -2.312 30.801 16.278 1.00 0.00 ATOM 188 OD1 ASN 26 -3.443 30.380 16.569 1.00 0.00 ATOM 189 ND2 ASN 26 -1.608 30.336 15.292 1.00 0.00 ATOM 190 N GLU 27 -2.318 35.121 18.575 1.00 0.00 ATOM 191 CA GLU 27 -1.570 36.125 19.300 1.00 0.00 ATOM 192 C GLU 27 -0.028 36.130 18.966 1.00 0.00 ATOM 193 O GLU 27 0.797 36.065 19.893 1.00 0.00 ATOM 194 CB GLU 27 -1.774 35.950 20.816 1.00 0.00 ATOM 195 CG GLU 27 -3.192 35.752 21.289 1.00 0.00 ATOM 196 CD GLU 27 -4.240 36.701 20.798 1.00 0.00 ATOM 197 OE1 GLU 27 -3.854 37.902 20.719 1.00 0.00 ATOM 198 OE2 GLU 27 -5.394 36.362 20.496 1.00 0.00 ATOM 199 N LEU 28 0.347 36.091 17.686 1.00 0.00 ATOM 200 CA LEU 28 1.739 36.086 17.298 1.00 0.00 ATOM 201 C LEU 28 2.035 37.423 16.594 1.00 0.00 ATOM 202 O LEU 28 1.333 37.793 15.631 1.00 0.00 ATOM 203 CB LEU 28 2.036 34.849 16.438 1.00 0.00 ATOM 204 CG LEU 28 1.835 33.466 16.996 1.00 0.00 ATOM 205 CD1 LEU 28 2.180 32.428 15.955 1.00 0.00 ATOM 206 CD2 LEU 28 2.684 33.286 18.229 1.00 0.00 ATOM 207 N ARG 29 2.973 38.146 17.187 1.00 0.00 ATOM 208 CA ARG 29 3.370 39.454 16.735 1.00 0.00 ATOM 209 C ARG 29 3.695 39.396 15.223 1.00 0.00 ATOM 210 O ARG 29 4.662 38.727 14.811 1.00 0.00 ATOM 211 CB ARG 29 4.560 39.876 17.601 1.00 0.00 ATOM 212 CG ARG 29 4.973 41.320 17.450 1.00 0.00 ATOM 213 CD ARG 29 5.931 41.610 18.588 1.00 0.00 ATOM 214 NE ARG 29 5.194 41.607 19.840 1.00 0.00 ATOM 215 CZ ARG 29 5.747 41.954 21.004 1.00 0.00 ATOM 216 NH1 ARG 29 7.033 42.321 21.113 1.00 0.00 ATOM 217 NH2 ARG 29 4.968 41.955 22.086 1.00 0.00 ATOM 218 N VAL 30 3.047 40.276 14.467 1.00 0.00 ATOM 219 CA VAL 30 3.228 40.353 13.014 1.00 0.00 ATOM 220 C VAL 30 3.791 41.733 12.632 1.00 0.00 ATOM 221 O VAL 30 3.142 42.771 12.841 1.00 0.00 ATOM 222 CB VAL 30 1.895 40.135 12.299 1.00 0.00 ATOM 223 CG1 VAL 30 1.921 40.300 10.822 1.00 0.00 ATOM 224 CG2 VAL 30 1.067 38.989 12.799 1.00 0.00 ATOM 225 N THR 31 4.943 41.737 11.968 1.00 0.00 ATOM 226 CA THR 31 5.561 42.963 11.617 1.00 0.00 ATOM 227 C THR 31 6.139 42.985 10.162 1.00 0.00 ATOM 228 O THR 31 6.261 41.967 9.463 1.00 0.00 ATOM 229 CB THR 31 6.700 43.382 12.617 1.00 0.00 ATOM 230 OG1 THR 31 7.894 42.512 12.521 1.00 0.00 ATOM 231 CG2 THR 31 6.154 43.715 13.988 1.00 0.00 ATOM 232 N GLU 32 6.282 44.229 9.700 1.00 0.00 ATOM 233 CA GLU 32 6.724 44.610 8.367 1.00 0.00 ATOM 234 C GLU 32 8.226 44.356 8.163 1.00 0.00 ATOM 235 O GLU 32 8.962 44.052 9.135 1.00 0.00 ATOM 236 CB GLU 32 6.345 46.075 8.231 1.00 0.00 ATOM 237 CG GLU 32 6.243 46.779 6.930 1.00 0.00 ATOM 238 CD GLU 32 4.889 46.379 6.328 1.00 0.00 ATOM 239 OE1 GLU 32 3.990 47.132 6.793 1.00 0.00 ATOM 240 OE2 GLU 32 4.794 45.466 5.565 1.00 0.00 ATOM 241 N ARG 33 8.636 44.370 6.900 1.00 0.00 ATOM 242 CA ARG 33 10.003 44.095 6.655 1.00 0.00 ATOM 243 C ARG 33 10.875 45.082 7.361 1.00 0.00 ATOM 244 O ARG 33 11.682 44.592 8.155 1.00 0.00 ATOM 245 CB ARG 33 10.201 44.130 5.127 1.00 0.00 ATOM 246 CG ARG 33 11.511 43.508 4.651 1.00 0.00 ATOM 247 CD ARG 33 11.682 44.150 3.296 1.00 0.00 ATOM 248 NE ARG 33 12.015 43.164 2.293 1.00 0.00 ATOM 249 CZ ARG 33 11.635 43.315 1.018 1.00 0.00 ATOM 250 NH1 ARG 33 10.918 44.375 0.613 1.00 0.00 ATOM 251 NH2 ARG 33 12.051 42.420 0.123 1.00 0.00 ATOM 252 N PRO 34 10.941 46.451 7.118 1.00 0.00 ATOM 253 CA PRO 34 11.845 47.213 7.915 1.00 0.00 ATOM 254 C PRO 34 11.748 47.032 9.469 1.00 0.00 ATOM 255 O PRO 34 12.745 47.422 10.119 1.00 0.00 ATOM 256 CB PRO 34 11.776 48.722 7.614 1.00 0.00 ATOM 257 CG PRO 34 10.258 48.789 7.260 1.00 0.00 ATOM 258 CD PRO 34 9.946 47.488 6.530 1.00 0.00 ATOM 259 N PHE 35 10.553 46.911 10.111 1.00 0.00 ATOM 260 CA PHE 35 10.596 46.690 11.591 1.00 0.00 ATOM 261 C PHE 35 11.717 45.686 11.976 1.00 0.00 ATOM 262 O PHE 35 12.421 46.005 12.929 1.00 0.00 ATOM 263 CB PHE 35 9.218 46.296 12.194 1.00 0.00 ATOM 264 CG PHE 35 8.219 47.398 11.988 1.00 0.00 ATOM 265 CD1 PHE 35 7.423 47.383 10.841 1.00 0.00 ATOM 266 CD2 PHE 35 8.116 48.450 12.852 1.00 0.00 ATOM 267 CE1 PHE 35 6.512 48.428 10.617 1.00 0.00 ATOM 268 CE2 PHE 35 7.183 49.485 12.687 1.00 0.00 ATOM 269 CZ PHE 35 6.385 49.463 11.543 1.00 0.00 ATOM 270 N TRP 36 11.697 44.455 11.470 1.00 0.00 ATOM 271 CA TRP 36 12.756 43.466 11.689 1.00 0.00 ATOM 272 C TRP 36 14.133 43.991 11.179 1.00 0.00 ATOM 273 O TRP 36 15.143 43.550 11.762 1.00 0.00 ATOM 274 CB TRP 36 12.348 42.194 10.954 1.00 0.00 ATOM 275 CG TRP 36 13.305 41.045 11.093 1.00 0.00 ATOM 276 CD1 TRP 36 13.918 40.365 10.086 1.00 0.00 ATOM 277 CD2 TRP 36 13.725 40.409 12.313 1.00 0.00 ATOM 278 NE1 TRP 36 14.719 39.378 10.595 1.00 0.00 ATOM 279 CE2 TRP 36 14.582 39.374 11.962 1.00 0.00 ATOM 280 CE3 TRP 36 13.458 40.652 13.657 1.00 0.00 ATOM 281 CZ2 TRP 36 15.147 38.533 12.905 1.00 0.00 ATOM 282 CZ3 TRP 36 14.057 39.856 14.601 1.00 0.00 ATOM 283 CH2 TRP 36 14.897 38.814 14.226 1.00 0.00 ATOM 284 N ILE 37 14.225 44.711 10.038 1.00 0.00 ATOM 285 CA ILE 37 15.498 45.268 9.567 1.00 0.00 ATOM 286 C ILE 37 16.133 46.198 10.681 1.00 0.00 ATOM 287 O ILE 37 17.352 46.387 10.683 1.00 0.00 ATOM 288 CB ILE 37 15.372 45.924 8.153 1.00 0.00 ATOM 289 CG1 ILE 37 16.601 45.686 7.318 1.00 0.00 ATOM 290 CG2 ILE 37 15.145 47.473 8.209 1.00 0.00 ATOM 291 CD1 ILE 37 16.693 44.146 7.005 1.00 0.00 ATOM 292 N SER 38 15.272 46.974 11.361 1.00 0.00 ATOM 293 CA SER 38 15.594 47.881 12.499 1.00 0.00 ATOM 294 C SER 38 16.202 47.153 13.742 1.00 0.00 ATOM 295 O SER 38 16.997 47.799 14.452 1.00 0.00 ATOM 296 CB SER 38 14.325 48.629 12.902 1.00 0.00 ATOM 297 OG SER 38 13.851 49.654 12.079 1.00 0.00 ATOM 298 N SER 39 15.544 46.062 14.208 1.00 0.00 ATOM 299 CA SER 39 16.099 45.273 15.292 1.00 0.00 ATOM 300 C SER 39 17.519 44.755 14.896 1.00 0.00 ATOM 301 O SER 39 18.323 44.459 15.792 1.00 0.00 ATOM 302 CB SER 39 15.106 44.206 15.685 1.00 0.00 ATOM 303 OG SER 39 14.984 43.008 15.006 1.00 0.00 ATOM 304 N PHE 40 17.706 44.398 13.611 1.00 0.00 ATOM 305 CA PHE 40 18.939 43.990 13.004 1.00 0.00 ATOM 306 C PHE 40 19.973 45.145 12.869 1.00 0.00 ATOM 307 O PHE 40 21.103 44.824 12.550 1.00 0.00 ATOM 308 CB PHE 40 18.670 43.404 11.614 1.00 0.00 ATOM 309 CG PHE 40 18.533 41.911 11.601 1.00 0.00 ATOM 310 CD1 PHE 40 18.076 41.238 12.741 1.00 0.00 ATOM 311 CD2 PHE 40 18.803 41.176 10.475 1.00 0.00 ATOM 312 CE1 PHE 40 17.883 39.890 12.759 1.00 0.00 ATOM 313 CE2 PHE 40 18.674 39.784 10.463 1.00 0.00 ATOM 314 CZ PHE 40 18.174 39.171 11.620 1.00 0.00 ATOM 315 N ILE 41 19.567 46.398 12.841 1.00 0.00 ATOM 316 CA ILE 41 20.570 47.373 12.774 1.00 0.00 ATOM 317 C ILE 41 21.178 47.573 14.220 1.00 0.00 ATOM 318 O ILE 41 21.724 48.648 14.494 1.00 0.00 ATOM 319 CB ILE 41 20.136 48.630 11.962 1.00 0.00 ATOM 320 CG1 ILE 41 21.330 49.424 11.468 1.00 0.00 ATOM 321 CG2 ILE 41 19.274 49.544 12.982 1.00 0.00 ATOM 322 CD1 ILE 41 20.899 50.592 10.510 1.00 0.00 ATOM 323 N GLY 42 21.640 46.440 14.777 1.00 0.00 ATOM 324 CA GLY 42 22.119 46.363 16.131 1.00 0.00 ATOM 325 C GLY 42 20.993 46.674 17.165 1.00 0.00 ATOM 326 O GLY 42 20.906 45.915 18.133 1.00 0.00 ATOM 327 N ARG 43 19.925 47.398 16.738 1.00 0.00 ATOM 328 CA ARG 43 18.903 47.814 17.650 1.00 0.00 ATOM 329 C ARG 43 19.616 48.503 18.868 1.00 0.00 ATOM 330 O ARG 43 19.680 47.922 19.972 1.00 0.00 ATOM 331 CB ARG 43 17.950 46.673 18.080 1.00 0.00 ATOM 332 CG ARG 43 16.946 47.129 19.148 1.00 0.00 ATOM 333 CD ARG 43 16.013 45.998 19.554 1.00 0.00 ATOM 334 NE ARG 43 16.803 44.894 20.119 1.00 0.00 ATOM 335 CZ ARG 43 17.221 44.876 21.389 1.00 0.00 ATOM 336 NH1 ARG 43 16.922 45.849 22.245 1.00 0.00 ATOM 337 NH2 ARG 43 18.075 43.921 21.771 1.00 0.00 ATOM 338 N SER 44 20.492 49.484 18.535 1.00 0.00 ATOM 339 CA SER 44 21.355 50.218 19.438 1.00 0.00 ATOM 340 C SER 44 22.576 49.337 19.848 1.00 0.00 ATOM 341 O SER 44 23.459 49.867 20.519 1.00 0.00 ATOM 342 CB SER 44 20.623 50.720 20.705 1.00 0.00 ATOM 343 OG SER 44 19.420 51.446 20.521 1.00 0.00 ATOM 344 N LYS 45 22.879 48.189 19.146 1.00 0.00 ATOM 345 CA LYS 45 23.995 47.324 19.439 1.00 0.00 ATOM 346 C LYS 45 24.981 47.210 18.245 1.00 0.00 ATOM 347 O LYS 45 26.076 46.672 18.487 1.00 0.00 ATOM 348 CB LYS 45 23.482 45.926 19.789 1.00 0.00 ATOM 349 CG LYS 45 22.524 45.818 20.947 1.00 0.00 ATOM 350 CD LYS 45 23.124 45.745 22.338 1.00 0.00 ATOM 351 CE LYS 45 21.937 45.833 23.296 1.00 0.00 ATOM 352 NZ LYS 45 22.290 45.548 24.672 1.00 0.00 TER END