####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS047_2-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS047_2-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 24 16 - 39 4.90 15.47 LONGEST_CONTINUOUS_SEGMENT: 24 18 - 41 4.93 15.59 LCS_AVERAGE: 45.25 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 20 - 28 1.92 24.19 LONGEST_CONTINUOUS_SEGMENT: 9 27 - 35 1.72 15.43 LCS_AVERAGE: 15.29 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 20 - 27 0.46 24.76 LCS_AVERAGE: 10.54 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 4 14 3 3 3 3 4 4 4 5 5 8 8 10 11 12 17 17 18 18 18 20 LCS_GDT V 3 V 3 3 5 14 3 3 4 5 6 7 7 8 9 11 11 11 13 15 17 17 18 18 18 20 LCS_GDT Q 4 Q 4 3 5 14 3 3 4 5 6 7 7 8 9 11 11 11 13 15 17 17 18 18 18 19 LCS_GDT G 5 G 5 4 5 14 3 4 4 5 6 7 7 8 9 11 11 11 13 15 17 17 18 18 18 20 LCS_GDT P 6 P 6 4 5 14 3 4 4 4 6 7 7 8 9 11 11 11 13 15 17 17 18 18 18 20 LCS_GDT W 7 W 7 4 5 14 3 4 4 4 5 7 7 8 9 11 11 11 13 15 17 17 18 18 18 20 LCS_GDT V 8 V 8 4 5 14 3 4 4 4 5 6 7 8 9 11 11 11 13 15 17 17 18 18 18 20 LCS_GDT G 9 G 9 3 5 14 3 3 3 5 6 7 7 8 9 11 11 11 13 15 17 17 18 18 18 20 LCS_GDT S 10 S 10 3 4 14 3 3 4 5 6 7 7 8 9 11 11 11 13 15 17 17 20 22 26 28 LCS_GDT S 11 S 11 3 4 14 3 3 3 3 4 4 5 6 9 11 11 12 13 15 17 17 20 22 23 28 LCS_GDT Y 12 Y 12 3 4 14 3 3 3 3 4 4 6 8 9 11 11 12 13 15 17 17 20 22 25 28 LCS_GDT V 13 V 13 3 4 14 3 3 3 3 4 4 5 7 9 11 11 12 14 20 25 26 28 30 30 31 LCS_GDT A 14 A 14 3 4 14 3 4 5 5 6 7 9 11 14 14 17 18 21 23 26 26 28 30 30 31 LCS_GDT E 15 E 15 3 4 14 3 3 4 4 4 5 7 11 11 13 17 18 21 23 26 26 28 30 30 31 LCS_GDT T 16 T 16 3 4 24 3 4 5 5 6 7 10 11 14 14 17 18 21 23 26 26 28 30 30 31 LCS_GDT G 17 G 17 3 4 24 3 3 4 4 4 5 6 8 9 13 15 18 21 23 26 26 28 30 30 31 LCS_GDT Q 18 Q 18 4 4 24 3 4 5 7 7 9 11 13 15 17 19 19 21 23 26 26 28 30 30 31 LCS_GDT N 19 N 19 4 4 24 3 4 6 8 11 13 14 16 16 17 19 19 21 23 26 26 28 30 30 31 LCS_GDT W 20 W 20 8 9 24 6 8 8 8 10 12 13 16 16 17 19 19 21 23 26 26 28 30 30 31 LCS_GDT A 21 A 21 8 9 24 6 8 8 8 10 13 14 16 16 17 19 19 21 23 26 26 28 30 30 31 LCS_GDT S 22 S 22 8 9 24 6 8 8 8 8 8 9 10 12 16 19 19 21 23 26 26 28 30 30 31 LCS_GDT L 23 L 23 8 9 24 6 8 8 8 11 12 14 16 16 17 19 19 21 23 26 26 28 30 30 31 LCS_GDT A 24 A 24 8 9 24 6 8 8 8 10 13 14 16 16 17 19 19 21 23 26 26 28 30 30 31 LCS_GDT A 25 A 25 8 9 24 6 8 8 8 8 8 9 11 12 13 17 19 21 22 26 26 28 30 30 31 LCS_GDT N 26 N 26 8 9 24 5 8 8 8 8 8 9 13 16 17 19 19 21 23 26 26 28 30 30 31 LCS_GDT E 27 E 27 8 9 24 6 8 8 8 10 13 14 16 16 17 19 19 21 21 26 26 28 30 30 31 LCS_GDT L 28 L 28 4 9 24 3 4 6 8 10 13 14 16 16 17 19 19 21 22 26 26 28 30 30 31 LCS_GDT R 29 R 29 4 9 24 3 4 6 8 11 13 14 16 16 17 19 19 21 23 26 26 28 30 30 31 LCS_GDT V 30 V 30 4 9 24 3 4 6 8 11 13 14 16 16 17 19 19 21 23 26 26 28 30 30 31 LCS_GDT T 31 T 31 5 9 24 3 4 5 6 8 10 12 14 15 17 19 19 21 23 26 26 28 30 30 31 LCS_GDT E 32 E 32 5 9 24 3 4 6 8 11 13 14 16 16 17 19 19 21 23 26 26 28 30 30 31 LCS_GDT R 33 R 33 5 9 24 3 4 6 8 11 13 14 16 16 17 19 19 21 23 26 26 28 30 30 31 LCS_GDT P 34 P 34 5 9 24 3 4 5 8 11 13 14 16 16 17 19 19 21 23 26 26 28 30 30 31 LCS_GDT F 35 F 35 5 9 24 3 4 6 8 11 13 14 16 16 17 19 19 21 23 26 26 28 30 30 31 LCS_GDT W 36 W 36 4 8 24 3 4 5 7 11 13 14 16 16 17 19 19 21 23 26 26 28 30 30 31 LCS_GDT I 37 I 37 4 8 24 3 4 6 8 11 13 14 16 16 17 19 19 21 23 26 26 28 30 30 31 LCS_GDT S 38 S 38 4 8 24 3 4 6 8 11 12 14 16 16 17 19 19 21 23 26 26 28 30 30 31 LCS_GDT S 39 S 39 3 7 24 0 3 4 4 6 6 8 10 12 15 17 18 21 23 26 26 28 30 30 31 LCS_GDT F 40 F 40 5 7 24 4 5 5 5 6 6 7 7 11 14 16 18 18 20 22 25 28 30 30 31 LCS_GDT I 41 I 41 5 7 24 4 5 5 5 6 6 7 10 11 14 16 18 18 20 23 26 28 30 30 31 LCS_GDT G 42 G 42 5 7 14 4 5 5 5 6 7 9 10 11 12 15 16 21 22 25 25 28 30 30 31 LCS_GDT R 43 R 43 5 7 14 4 5 5 5 6 7 9 10 11 12 13 15 21 22 23 25 27 28 30 31 LCS_GDT S 44 S 44 5 7 14 3 5 5 5 6 7 9 10 11 12 13 13 14 14 18 20 20 22 26 27 LCS_GDT K 45 K 45 3 7 14 3 4 4 5 6 7 9 10 11 12 13 13 14 14 14 14 14 16 17 18 LCS_AVERAGE LCS_A: 23.69 ( 10.54 15.29 45.25 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 6 8 8 8 11 13 14 16 16 17 19 19 21 23 26 26 28 30 30 31 GDT PERCENT_AT 13.64 18.18 18.18 18.18 25.00 29.55 31.82 36.36 36.36 38.64 43.18 43.18 47.73 52.27 59.09 59.09 63.64 68.18 68.18 70.45 GDT RMS_LOCAL 0.26 0.46 0.46 0.46 1.84 2.22 2.37 2.65 2.65 2.86 3.31 3.31 3.80 4.91 5.26 5.26 5.58 5.92 5.92 6.17 GDT RMS_ALL_AT 24.40 24.76 24.76 24.76 17.42 17.08 17.02 17.73 17.73 17.72 17.40 17.40 16.89 14.25 14.49 14.49 14.32 14.13 14.13 14.01 # Checking swapping # possible swapping detected: E 15 E 15 # possible swapping detected: F 35 F 35 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 33.635 0 0.125 0.194 36.269 0.000 0.000 - LGA V 3 V 3 29.700 0 0.345 1.044 33.818 0.000 0.000 26.142 LGA Q 4 Q 4 32.431 0 0.063 0.971 33.868 0.000 0.000 33.644 LGA G 5 G 5 34.889 0 0.372 0.372 35.310 0.000 0.000 - LGA P 6 P 6 35.066 0 0.251 0.289 36.565 0.000 0.000 36.565 LGA W 7 W 7 33.191 0 0.401 1.196 36.270 0.000 0.000 36.270 LGA V 8 V 8 31.826 0 0.585 0.553 35.744 0.000 0.000 31.991 LGA G 9 G 9 25.182 0 0.542 0.542 27.655 0.000 0.000 - LGA S 10 S 10 21.396 0 0.581 0.637 22.523 0.000 0.000 20.321 LGA S 11 S 11 24.418 0 0.598 0.668 28.187 0.000 0.000 28.187 LGA Y 12 Y 12 20.407 0 0.644 1.314 21.475 0.000 0.000 15.795 LGA V 13 V 13 15.323 0 0.079 0.123 16.686 0.000 0.000 14.052 LGA A 14 A 14 16.192 0 0.599 0.574 17.714 0.000 0.000 - LGA E 15 E 15 15.320 0 0.238 0.815 18.271 0.000 0.000 17.357 LGA T 16 T 16 12.353 0 0.136 0.294 13.627 0.000 0.000 11.432 LGA G 17 G 17 12.509 0 0.201 0.201 12.509 0.000 0.000 - LGA Q 18 Q 18 7.458 0 0.644 1.092 13.061 0.909 0.404 11.022 LGA N 19 N 19 1.086 0 0.092 1.050 3.446 44.091 35.682 2.853 LGA W 20 W 20 3.707 0 0.644 1.057 13.074 35.000 10.000 12.339 LGA A 21 A 21 2.709 0 0.024 0.032 4.427 33.182 27.636 - LGA S 22 S 22 5.946 0 0.038 0.584 7.774 1.818 1.212 7.296 LGA L 23 L 23 3.440 0 0.039 0.283 9.140 44.091 22.273 9.140 LGA A 24 A 24 3.402 0 0.044 0.054 5.401 22.273 18.182 - LGA A 25 A 25 7.166 0 0.196 0.192 8.675 0.000 0.000 - LGA N 26 N 26 5.465 0 0.245 1.140 9.825 1.818 0.909 9.825 LGA E 27 E 27 3.544 0 0.194 0.923 6.414 16.364 7.273 6.414 LGA L 28 L 28 2.988 0 0.529 1.366 4.700 18.636 19.091 3.481 LGA R 29 R 29 1.625 0 0.573 1.410 7.641 44.091 27.107 7.641 LGA V 30 V 30 2.028 0 0.057 0.138 3.291 33.636 34.545 2.091 LGA T 31 T 31 6.103 0 0.292 1.172 9.942 0.909 0.519 8.101 LGA E 32 E 32 2.382 0 0.216 0.849 6.710 43.182 26.465 6.121 LGA R 33 R 33 1.791 0 0.493 1.453 9.672 32.727 14.545 9.644 LGA P 34 P 34 2.007 0 0.092 0.322 2.221 38.182 40.000 1.922 LGA F 35 F 35 2.665 0 0.129 1.122 3.403 49.545 34.545 2.594 LGA W 36 W 36 1.785 0 0.089 1.157 8.664 66.364 25.844 8.664 LGA I 37 I 37 2.208 0 0.623 1.321 6.187 30.455 22.045 6.187 LGA S 38 S 38 3.185 0 0.657 0.583 5.840 14.091 26.667 2.107 LGA S 39 S 39 9.615 0 0.663 0.549 12.389 0.000 0.000 12.389 LGA F 40 F 40 11.745 0 0.555 0.701 14.543 0.000 0.000 12.896 LGA I 41 I 41 12.691 0 0.054 0.134 14.892 0.000 0.000 9.657 LGA G 42 G 42 18.506 0 0.335 0.335 20.856 0.000 0.000 - LGA R 43 R 43 19.930 0 0.514 1.160 21.408 0.000 0.000 18.757 LGA S 44 S 44 25.372 0 0.235 0.570 28.742 0.000 0.000 26.103 LGA K 45 K 45 30.954 0 0.586 1.000 33.985 0.000 0.000 32.552 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 11.653 11.527 12.444 12.986 8.976 5.714 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 16 2.65 32.955 28.653 0.582 LGA_LOCAL RMSD: 2.647 Number of atoms: 16 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 17.727 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 11.653 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.892933 * X + 0.307820 * Y + 0.328509 * Z + 24.374525 Y_new = -0.436627 * X + 0.769922 * Y + 0.465379 * Z + 23.894541 Z_new = -0.109673 * X + -0.558988 * Y + 0.821891 * Z + -16.741587 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.454794 0.109894 -0.597262 [DEG: -26.0578 6.2965 -34.2206 ] ZXZ: 2.526921 0.606074 -2.947854 [DEG: 144.7819 34.7255 -168.8996 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS047_2-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS047_2-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 16 2.65 28.653 11.65 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS047_2-D1 PFRMAT TS TARGET T0953s2 MODEL 2 REFINED PARENT 4YTP_A ATOM 9 N ALA 2 -5.484 14.599 -7.024 1.00 0.00 ATOM 10 CA ALA 2 -5.298 13.730 -5.905 1.00 0.00 ATOM 11 C ALA 2 -3.846 13.195 -5.916 1.00 0.00 ATOM 12 O ALA 2 -3.373 12.618 -6.910 1.00 0.00 ATOM 13 CB ALA 2 -6.249 12.550 -6.104 1.00 0.00 ATOM 14 N VAL 3 -3.193 13.316 -4.797 1.00 0.00 ATOM 15 CA VAL 3 -1.855 12.810 -4.525 1.00 0.00 ATOM 16 C VAL 3 -2.043 11.302 -4.233 1.00 0.00 ATOM 17 O VAL 3 -2.730 10.665 -5.073 1.00 0.00 ATOM 18 CB VAL 3 -1.198 13.637 -3.409 1.00 0.00 ATOM 19 CG1 VAL 3 -1.029 15.085 -3.806 1.00 0.00 ATOM 20 CG2 VAL 3 -1.977 13.528 -2.101 1.00 0.00 ATOM 21 N GLN 4 -1.175 10.633 -3.507 1.00 0.00 ATOM 22 CA GLN 4 -1.349 9.186 -3.322 1.00 0.00 ATOM 23 C GLN 4 -2.859 8.908 -3.071 1.00 0.00 ATOM 24 O GLN 4 -3.487 9.606 -2.260 1.00 0.00 ATOM 25 CB GLN 4 -0.417 8.786 -2.161 1.00 0.00 ATOM 26 CG GLN 4 -0.637 7.399 -1.559 1.00 0.00 ATOM 27 CD GLN 4 0.621 6.873 -0.868 1.00 0.00 ATOM 28 OE1 GLN 4 0.755 5.660 -0.701 1.00 0.00 ATOM 29 NE2 GLN 4 1.598 7.674 -0.423 1.00 0.00 ATOM 30 N GLY 5 -3.265 7.677 -3.368 1.00 0.00 ATOM 31 CA GLY 5 -4.673 7.323 -3.265 1.00 0.00 ATOM 32 C GLY 5 -5.271 7.493 -4.716 1.00 0.00 ATOM 33 O GLY 5 -5.901 8.554 -4.921 1.00 0.00 ATOM 34 N PRO 6 -4.825 6.716 -5.782 1.00 0.00 ATOM 35 CA PRO 6 -5.243 7.011 -7.124 1.00 0.00 ATOM 36 C PRO 6 -6.716 7.440 -7.251 1.00 0.00 ATOM 37 O PRO 6 -6.929 8.583 -7.661 1.00 0.00 ATOM 38 CB PRO 6 -4.798 5.915 -8.167 1.00 0.00 ATOM 39 CG PRO 6 -4.652 4.735 -7.126 1.00 0.00 ATOM 40 CD PRO 6 -4.302 5.294 -5.747 1.00 0.00 ATOM 41 N TRP 7 -7.709 6.699 -6.775 1.00 0.00 ATOM 42 CA TRP 7 -9.137 7.142 -6.841 1.00 0.00 ATOM 43 C TRP 7 -9.590 8.001 -5.621 1.00 0.00 ATOM 44 O TRP 7 -10.628 8.648 -5.780 1.00 0.00 ATOM 45 CB TRP 7 -9.996 5.879 -6.947 1.00 0.00 ATOM 46 CG TRP 7 -9.891 5.198 -8.275 1.00 0.00 ATOM 47 CD1 TRP 7 -9.343 5.746 -9.432 1.00 0.00 ATOM 48 CD2 TRP 7 -10.433 3.956 -8.517 1.00 0.00 ATOM 49 NE1 TRP 7 -9.566 4.853 -10.385 1.00 0.00 ATOM 50 CE2 TRP 7 -10.209 3.784 -9.886 1.00 0.00 ATOM 51 CE3 TRP 7 -11.087 2.996 -7.770 1.00 0.00 ATOM 52 CZ2 TRP 7 -10.645 2.651 -10.509 1.00 0.00 ATOM 53 CZ3 TRP 7 -11.528 1.842 -8.412 1.00 0.00 ATOM 54 CH2 TRP 7 -11.309 1.677 -9.764 1.00 0.00 ATOM 55 N VAL 8 -9.048 7.790 -4.402 1.00 0.00 ATOM 56 CA VAL 8 -9.435 8.660 -3.270 1.00 0.00 ATOM 57 C VAL 8 -8.643 10.006 -3.259 1.00 0.00 ATOM 58 O VAL 8 -7.499 10.051 -2.831 1.00 0.00 ATOM 59 CB VAL 8 -9.267 7.898 -1.960 1.00 0.00 ATOM 60 CG1 VAL 8 -9.511 8.751 -0.680 1.00 0.00 ATOM 61 CG2 VAL 8 -10.129 6.652 -1.866 1.00 0.00 ATOM 62 N GLY 9 -9.031 10.815 -4.201 1.00 0.00 ATOM 63 CA GLY 9 -8.504 12.116 -4.332 1.00 0.00 ATOM 64 C GLY 9 -8.987 13.119 -3.254 1.00 0.00 ATOM 65 O GLY 9 -10.179 13.393 -3.168 1.00 0.00 ATOM 66 N SER 10 -8.091 13.870 -2.756 1.00 0.00 ATOM 67 CA SER 10 -8.333 14.921 -1.819 1.00 0.00 ATOM 68 C SER 10 -8.164 16.204 -2.606 1.00 0.00 ATOM 69 O SER 10 -7.036 16.672 -2.793 1.00 0.00 ATOM 70 CB SER 10 -7.406 14.690 -0.669 1.00 0.00 ATOM 71 OG SER 10 -6.095 15.135 -0.617 1.00 0.00 ATOM 72 N SER 11 -9.274 16.834 -3.069 1.00 0.00 ATOM 73 CA SER 11 -9.074 17.996 -3.896 1.00 0.00 ATOM 74 C SER 11 -9.192 19.323 -3.116 1.00 0.00 ATOM 75 O SER 11 -10.270 19.630 -2.551 1.00 0.00 ATOM 76 CB SER 11 -10.091 17.997 -5.035 1.00 0.00 ATOM 77 OG SER 11 -9.537 18.131 -6.378 1.00 0.00 ATOM 78 N TYR 12 -7.995 19.783 -2.673 1.00 0.00 ATOM 79 CA TYR 12 -7.818 21.030 -1.902 1.00 0.00 ATOM 80 C TYR 12 -6.344 21.585 -2.007 1.00 0.00 ATOM 81 O TYR 12 -5.408 20.792 -1.974 1.00 0.00 ATOM 82 CB TYR 12 -8.125 20.787 -0.431 1.00 0.00 ATOM 83 CG TYR 12 -7.092 19.933 0.289 1.00 0.00 ATOM 84 CD1 TYR 12 -7.179 18.540 0.119 1.00 0.00 ATOM 85 CD2 TYR 12 -6.044 20.445 1.066 1.00 0.00 ATOM 86 CE1 TYR 12 -6.262 17.669 0.693 1.00 0.00 ATOM 87 CE2 TYR 12 -5.107 19.581 1.648 1.00 0.00 ATOM 88 CZ TYR 12 -5.225 18.200 1.459 1.00 0.00 ATOM 89 OH TYR 12 -4.328 17.327 2.008 1.00 0.00 ATOM 90 N VAL 13 -6.146 22.920 -2.042 1.00 0.00 ATOM 91 CA VAL 13 -4.779 23.445 -2.127 1.00 0.00 ATOM 92 C VAL 13 -4.428 24.646 -1.184 1.00 0.00 ATOM 93 O VAL 13 -3.331 24.606 -0.609 1.00 0.00 ATOM 94 CB VAL 13 -4.419 23.828 -3.577 1.00 0.00 ATOM 95 CG1 VAL 13 -2.946 24.221 -3.754 1.00 0.00 ATOM 96 CG2 VAL 13 -4.872 22.715 -4.551 1.00 0.00 ATOM 97 N ALA 14 -5.307 25.679 -1.061 1.00 0.00 ATOM 98 CA ALA 14 -4.924 26.897 -0.310 1.00 0.00 ATOM 99 C ALA 14 -5.070 26.734 1.220 1.00 0.00 ATOM 100 O ALA 14 -6.147 26.375 1.728 1.00 0.00 ATOM 101 CB ALA 14 -5.785 28.056 -0.826 1.00 0.00 ATOM 102 N GLU 15 -3.875 26.607 1.828 1.00 0.00 ATOM 103 CA GLU 15 -3.655 26.508 3.301 1.00 0.00 ATOM 104 C GLU 15 -2.807 27.687 3.897 1.00 0.00 ATOM 105 O GLU 15 -2.452 27.625 5.079 1.00 0.00 ATOM 106 CB GLU 15 -2.996 25.136 3.593 1.00 0.00 ATOM 107 CG GLU 15 -2.832 25.037 5.158 1.00 0.00 ATOM 108 CD GLU 15 -2.358 23.647 5.570 1.00 0.00 ATOM 109 OE1 GLU 15 -2.142 23.384 6.814 1.00 0.00 ATOM 110 OE2 GLU 15 -2.169 22.741 4.674 1.00 0.00 ATOM 111 N THR 16 -2.573 28.813 3.186 1.00 0.00 ATOM 112 CA THR 16 -1.826 29.898 3.786 1.00 0.00 ATOM 113 C THR 16 -2.716 30.649 4.837 1.00 0.00 ATOM 114 O THR 16 -2.174 30.996 5.881 1.00 0.00 ATOM 115 CB THR 16 -1.132 30.844 2.732 1.00 0.00 ATOM 116 OG1 THR 16 -1.912 32.026 2.461 1.00 0.00 ATOM 117 CG2 THR 16 -0.787 30.219 1.342 1.00 0.00 ATOM 118 N GLY 17 -3.939 31.127 4.466 1.00 0.00 ATOM 119 CA GLY 17 -4.854 31.739 5.380 1.00 0.00 ATOM 120 C GLY 17 -5.094 30.757 6.541 1.00 0.00 ATOM 121 O GLY 17 -5.290 31.268 7.638 1.00 0.00 ATOM 122 N GLN 18 -5.554 29.529 6.234 1.00 0.00 ATOM 123 CA GLN 18 -5.712 28.501 7.232 1.00 0.00 ATOM 124 C GLN 18 -4.474 28.489 8.205 1.00 0.00 ATOM 125 O GLN 18 -4.680 28.245 9.389 1.00 0.00 ATOM 126 CB GLN 18 -5.919 27.153 6.541 1.00 0.00 ATOM 127 CG GLN 18 -7.306 27.008 5.939 1.00 0.00 ATOM 128 CD GLN 18 -7.622 25.606 5.394 1.00 0.00 ATOM 129 OE1 GLN 18 -8.727 25.031 5.567 1.00 0.00 ATOM 130 NE2 GLN 18 -6.639 25.039 4.728 1.00 0.00 ATOM 131 N ASN 19 -3.228 28.572 7.699 1.00 0.00 ATOM 132 CA ASN 19 -2.051 28.617 8.521 1.00 0.00 ATOM 133 C ASN 19 -1.987 29.854 9.479 1.00 0.00 ATOM 134 O ASN 19 -1.738 29.611 10.652 1.00 0.00 ATOM 135 CB ASN 19 -0.854 28.650 7.516 1.00 0.00 ATOM 136 CG ASN 19 -0.385 27.269 7.158 1.00 0.00 ATOM 137 OD1 ASN 19 -0.674 26.238 7.826 1.00 0.00 ATOM 138 ND2 ASN 19 0.425 27.166 6.079 1.00 0.00 ATOM 139 N TRP 20 -2.027 31.102 9.002 1.00 0.00 ATOM 140 CA TRP 20 -1.925 32.369 9.769 1.00 0.00 ATOM 141 C TRP 20 -3.172 32.413 10.736 1.00 0.00 ATOM 142 O TRP 20 -2.987 32.976 11.817 1.00 0.00 ATOM 143 CB TRP 20 -2.035 33.375 8.652 1.00 0.00 ATOM 144 CG TRP 20 -0.793 33.698 7.857 1.00 0.00 ATOM 145 CD1 TRP 20 0.371 32.978 7.885 1.00 0.00 ATOM 146 CD2 TRP 20 -0.700 34.527 6.715 1.00 0.00 ATOM 147 NE1 TRP 20 1.242 33.443 6.930 1.00 0.00 ATOM 148 CE2 TRP 20 0.577 34.358 6.142 1.00 0.00 ATOM 149 CE3 TRP 20 -1.646 35.295 6.044 1.00 0.00 ATOM 150 CZ2 TRP 20 0.944 34.958 4.953 1.00 0.00 ATOM 151 CZ3 TRP 20 -1.259 35.944 4.908 1.00 0.00 ATOM 152 CH2 TRP 20 0.009 35.768 4.344 1.00 0.00 ATOM 153 N ALA 21 -4.407 32.367 10.170 1.00 0.00 ATOM 154 CA ALA 21 -5.628 32.307 10.975 1.00 0.00 ATOM 155 C ALA 21 -5.401 31.360 12.186 1.00 0.00 ATOM 156 O ALA 21 -6.014 31.653 13.215 1.00 0.00 ATOM 157 CB ALA 21 -6.823 31.898 10.110 1.00 0.00 ATOM 158 N SER 22 -4.920 30.111 11.966 1.00 0.00 ATOM 159 CA SER 22 -4.592 29.217 13.069 1.00 0.00 ATOM 160 C SER 22 -3.646 29.980 14.052 1.00 0.00 ATOM 161 O SER 22 -3.889 29.874 15.231 1.00 0.00 ATOM 162 CB SER 22 -3.874 27.959 12.686 1.00 0.00 ATOM 163 OG SER 22 -4.495 26.957 11.976 1.00 0.00 ATOM 164 N LEU 23 -2.464 30.468 13.637 1.00 0.00 ATOM 165 CA LEU 23 -1.525 31.207 14.456 1.00 0.00 ATOM 166 C LEU 23 -2.296 32.285 15.294 1.00 0.00 ATOM 167 O LEU 23 -1.914 32.465 16.441 1.00 0.00 ATOM 168 CB LEU 23 -0.539 31.791 13.483 1.00 0.00 ATOM 169 CG LEU 23 0.717 31.010 13.231 1.00 0.00 ATOM 170 CD1 LEU 23 1.697 31.841 12.390 1.00 0.00 ATOM 171 CD2 LEU 23 1.332 30.506 14.500 1.00 0.00 ATOM 172 N ALA 24 -3.119 33.150 14.647 1.00 0.00 ATOM 173 CA ALA 24 -3.972 34.133 15.324 1.00 0.00 ATOM 174 C ALA 24 -4.805 33.428 16.422 1.00 0.00 ATOM 175 O ALA 24 -4.853 34.002 17.519 1.00 0.00 ATOM 176 CB ALA 24 -4.821 34.879 14.292 1.00 0.00 ATOM 177 N ALA 25 -5.660 32.416 16.079 1.00 0.00 ATOM 178 CA ALA 25 -6.360 31.688 17.141 1.00 0.00 ATOM 179 C ALA 25 -5.356 30.941 18.088 1.00 0.00 ATOM 180 O ALA 25 -5.810 30.434 19.124 1.00 0.00 ATOM 181 CB ALA 25 -7.294 30.694 16.468 1.00 0.00 ATOM 182 N ASN 26 -4.027 30.904 17.797 1.00 0.00 ATOM 183 CA ASN 26 -2.986 30.274 18.600 1.00 0.00 ATOM 184 C ASN 26 -2.143 31.275 19.502 1.00 0.00 ATOM 185 O ASN 26 -1.152 30.889 20.134 1.00 0.00 ATOM 186 CB ASN 26 -2.016 29.487 17.797 1.00 0.00 ATOM 187 CG ASN 26 -2.457 28.193 17.235 1.00 0.00 ATOM 188 OD1 ASN 26 -1.751 27.542 16.433 1.00 0.00 ATOM 189 ND2 ASN 26 -3.668 27.773 17.657 1.00 0.00 ATOM 190 N GLU 27 -2.792 32.407 19.773 1.00 0.00 ATOM 191 CA GLU 27 -2.293 33.535 20.604 1.00 0.00 ATOM 192 C GLU 27 -1.012 34.255 20.043 1.00 0.00 ATOM 193 O GLU 27 -0.496 35.089 20.820 1.00 0.00 ATOM 194 CB GLU 27 -2.037 33.008 22.024 1.00 0.00 ATOM 195 CG GLU 27 -3.297 32.786 22.840 1.00 0.00 ATOM 196 CD GLU 27 -3.103 32.118 24.200 1.00 0.00 ATOM 197 OE1 GLU 27 -2.134 31.343 24.352 1.00 0.00 ATOM 198 OE2 GLU 27 -3.938 32.357 25.088 1.00 0.00 ATOM 199 N LEU 28 -1.083 34.548 18.742 1.00 0.00 ATOM 200 CA LEU 28 -0.094 35.263 17.957 1.00 0.00 ATOM 201 C LEU 28 -0.577 36.694 17.730 1.00 0.00 ATOM 202 O LEU 28 -1.593 36.913 17.056 1.00 0.00 ATOM 203 CB LEU 28 0.040 34.618 16.575 1.00 0.00 ATOM 204 CG LEU 28 1.203 35.088 15.687 1.00 0.00 ATOM 205 CD1 LEU 28 2.560 34.760 16.265 1.00 0.00 ATOM 206 CD2 LEU 28 1.018 34.453 14.298 1.00 0.00 ATOM 207 N ARG 29 0.163 37.657 18.293 1.00 0.00 ATOM 208 CA ARG 29 -0.213 39.056 18.141 1.00 0.00 ATOM 209 C ARG 29 0.062 39.568 16.695 1.00 0.00 ATOM 210 O ARG 29 0.838 38.965 15.953 1.00 0.00 ATOM 211 CB ARG 29 0.546 39.854 19.221 1.00 0.00 ATOM 212 CG ARG 29 -0.130 39.764 20.585 1.00 0.00 ATOM 213 CD ARG 29 0.775 39.984 21.813 1.00 0.00 ATOM 214 NE ARG 29 0.018 39.690 23.035 1.00 0.00 ATOM 215 CZ ARG 29 0.233 38.601 23.799 1.00 0.00 ATOM 216 NH1 ARG 29 1.181 37.727 23.472 1.00 0.00 ATOM 217 NH2 ARG 29 -0.594 38.364 24.836 1.00 0.00 ATOM 218 N VAL 30 -0.946 40.253 16.176 1.00 0.00 ATOM 219 CA VAL 30 -0.932 40.897 14.873 1.00 0.00 ATOM 220 C VAL 30 -1.134 42.390 15.145 1.00 0.00 ATOM 221 O VAL 30 -2.105 42.761 15.801 1.00 0.00 ATOM 222 CB VAL 30 -2.002 40.322 13.881 1.00 0.00 ATOM 223 CG1 VAL 30 -1.966 41.065 12.499 1.00 0.00 ATOM 224 CG2 VAL 30 -1.920 38.830 13.730 1.00 0.00 ATOM 225 N THR 31 -0.488 43.250 14.362 1.00 0.00 ATOM 226 CA THR 31 -0.627 44.721 14.418 1.00 0.00 ATOM 227 C THR 31 -2.107 45.249 14.552 1.00 0.00 ATOM 228 O THR 31 -2.398 45.730 15.635 1.00 0.00 ATOM 229 CB THR 31 0.212 45.338 13.259 1.00 0.00 ATOM 230 OG1 THR 31 0.478 46.748 13.465 1.00 0.00 ATOM 231 CG2 THR 31 -0.442 45.088 11.837 1.00 0.00 ATOM 232 N GLU 32 -3.042 44.845 13.716 1.00 0.00 ATOM 233 CA GLU 32 -4.380 45.403 13.774 1.00 0.00 ATOM 234 C GLU 32 -5.419 44.317 14.039 1.00 0.00 ATOM 235 O GLU 32 -5.056 43.234 14.520 1.00 0.00 ATOM 236 CB GLU 32 -4.651 46.098 12.415 1.00 0.00 ATOM 237 CG GLU 32 -5.095 47.579 12.447 1.00 0.00 ATOM 238 CD GLU 32 -4.775 48.356 11.170 1.00 0.00 ATOM 239 OE1 GLU 32 -5.064 47.941 10.043 1.00 0.00 ATOM 240 OE2 GLU 32 -4.191 49.443 11.463 1.00 0.00 ATOM 241 N ARG 33 -6.626 44.793 14.346 1.00 0.00 ATOM 242 CA ARG 33 -7.802 44.017 14.666 1.00 0.00 ATOM 243 C ARG 33 -7.800 42.921 13.563 1.00 0.00 ATOM 244 O ARG 33 -7.209 41.865 13.845 1.00 0.00 ATOM 245 CB ARG 33 -9.047 44.825 14.656 1.00 0.00 ATOM 246 CG ARG 33 -9.284 45.828 15.761 1.00 0.00 ATOM 247 CD ARG 33 -10.595 46.564 15.778 1.00 0.00 ATOM 248 NE ARG 33 -11.683 45.616 16.072 1.00 0.00 ATOM 249 CZ ARG 33 -12.648 45.768 17.000 1.00 0.00 ATOM 250 NH1 ARG 33 -12.671 46.823 17.841 1.00 0.00 ATOM 251 NH2 ARG 33 -13.558 44.780 17.085 1.00 0.00 ATOM 252 N PRO 34 -8.439 43.026 12.311 1.00 0.00 ATOM 253 CA PRO 34 -8.186 42.007 11.373 1.00 0.00 ATOM 254 C PRO 34 -6.682 42.049 11.083 1.00 0.00 ATOM 255 O PRO 34 -6.076 43.116 11.187 1.00 0.00 ATOM 256 CB PRO 34 -9.010 42.205 10.084 1.00 0.00 ATOM 257 CG PRO 34 -9.465 43.657 10.224 1.00 0.00 ATOM 258 CD PRO 34 -9.497 44.004 11.704 1.00 0.00 ATOM 259 N PHE 35 -6.055 40.950 10.577 1.00 0.00 ATOM 260 CA PHE 35 -4.604 40.825 10.350 1.00 0.00 ATOM 261 C PHE 35 -4.108 42.026 9.563 1.00 0.00 ATOM 262 O PHE 35 -4.631 42.251 8.446 1.00 0.00 ATOM 263 CB PHE 35 -4.275 39.601 9.508 1.00 0.00 ATOM 264 CG PHE 35 -4.464 38.302 10.147 1.00 0.00 ATOM 265 CD1 PHE 35 -5.757 37.755 10.284 1.00 0.00 ATOM 266 CD2 PHE 35 -3.370 37.594 10.591 1.00 0.00 ATOM 267 CE1 PHE 35 -5.971 36.493 10.854 1.00 0.00 ATOM 268 CE2 PHE 35 -3.533 36.338 11.180 1.00 0.00 ATOM 269 CZ PHE 35 -4.853 35.768 11.313 1.00 0.00 ATOM 270 N TRP 36 -3.016 42.685 9.971 1.00 0.00 ATOM 271 CA TRP 36 -2.548 43.787 9.140 1.00 0.00 ATOM 272 C TRP 36 -1.395 43.258 8.234 1.00 0.00 ATOM 273 O TRP 36 -0.296 42.879 8.703 1.00 0.00 ATOM 274 CB TRP 36 -2.253 45.055 9.895 1.00 0.00 ATOM 275 CG TRP 36 -1.668 46.213 9.150 1.00 0.00 ATOM 276 CD1 TRP 36 -2.398 47.306 8.733 1.00 0.00 ATOM 277 CD2 TRP 36 -0.326 46.442 8.709 1.00 0.00 ATOM 278 NE1 TRP 36 -1.592 48.192 8.080 1.00 0.00 ATOM 279 CE2 TRP 36 -0.329 47.709 8.039 1.00 0.00 ATOM 280 CE3 TRP 36 0.874 45.710 8.867 1.00 0.00 ATOM 281 CZ2 TRP 36 0.829 48.248 7.496 1.00 0.00 ATOM 282 CZ3 TRP 36 2.046 46.206 8.308 1.00 0.00 ATOM 283 CH2 TRP 36 2.009 47.455 7.641 1.00 0.00 ATOM 284 N ILE 37 -1.792 43.026 6.968 1.00 0.00 ATOM 285 CA ILE 37 -0.983 42.501 5.885 1.00 0.00 ATOM 286 C ILE 37 -0.429 43.695 5.020 1.00 0.00 ATOM 287 O ILE 37 -1.209 44.491 4.448 1.00 0.00 ATOM 288 CB ILE 37 -1.868 41.581 4.975 1.00 0.00 ATOM 289 CG1 ILE 37 -3.029 42.334 4.350 1.00 0.00 ATOM 290 CG2 ILE 37 -2.373 40.301 5.732 1.00 0.00 ATOM 291 CD1 ILE 37 -4.195 41.543 3.699 1.00 0.00 ATOM 292 N SER 38 0.889 43.828 4.897 1.00 0.00 ATOM 293 CA SER 38 1.578 44.887 4.138 1.00 0.00 ATOM 294 C SER 38 2.255 44.329 2.838 1.00 0.00 ATOM 295 O SER 38 2.322 43.131 2.632 1.00 0.00 ATOM 296 CB SER 38 2.570 45.546 5.089 1.00 0.00 ATOM 297 OG SER 38 3.558 44.695 5.646 1.00 0.00 ATOM 298 N SER 39 2.623 45.217 1.939 1.00 0.00 ATOM 299 CA SER 39 3.301 44.856 0.722 1.00 0.00 ATOM 300 C SER 39 4.760 44.367 0.998 1.00 0.00 ATOM 301 O SER 39 5.447 44.897 1.860 1.00 0.00 ATOM 302 CB SER 39 3.361 46.053 -0.206 1.00 0.00 ATOM 303 OG SER 39 4.027 47.196 0.180 1.00 0.00 ATOM 304 N PHE 40 5.251 43.642 0.021 1.00 0.00 ATOM 305 CA PHE 40 6.563 42.971 -0.007 1.00 0.00 ATOM 306 C PHE 40 7.058 42.757 -1.465 1.00 0.00 ATOM 307 O PHE 40 6.727 43.590 -2.333 1.00 0.00 ATOM 308 CB PHE 40 6.421 41.680 0.817 1.00 0.00 ATOM 309 CG PHE 40 7.419 41.411 1.871 1.00 0.00 ATOM 310 CD1 PHE 40 8.680 40.875 1.571 1.00 0.00 ATOM 311 CD2 PHE 40 7.084 41.596 3.217 1.00 0.00 ATOM 312 CE1 PHE 40 9.610 40.540 2.566 1.00 0.00 ATOM 313 CE2 PHE 40 8.003 41.281 4.226 1.00 0.00 ATOM 314 CZ PHE 40 9.253 40.748 3.894 1.00 0.00 ATOM 315 N ILE 41 8.246 42.108 -1.614 1.00 0.00 ATOM 316 CA ILE 41 8.832 41.867 -2.959 1.00 0.00 ATOM 317 C ILE 41 8.029 40.774 -3.749 1.00 0.00 ATOM 318 O ILE 41 7.930 39.607 -3.338 1.00 0.00 ATOM 319 CB ILE 41 10.316 41.432 -2.796 1.00 0.00 ATOM 320 CG1 ILE 41 11.152 42.394 -1.965 1.00 0.00 ATOM 321 CG2 ILE 41 10.926 41.256 -4.204 1.00 0.00 ATOM 322 CD1 ILE 41 12.639 42.072 -1.604 1.00 0.00 ATOM 323 N GLY 42 7.763 41.151 -5.035 1.00 0.00 ATOM 324 CA GLY 42 7.103 40.325 -6.097 1.00 0.00 ATOM 325 C GLY 42 5.656 39.884 -5.762 1.00 0.00 ATOM 326 O GLY 42 5.405 38.667 -5.677 1.00 0.00 ATOM 327 N ARG 43 4.925 40.836 -5.227 1.00 0.00 ATOM 328 CA ARG 43 3.591 40.671 -4.636 1.00 0.00 ATOM 329 C ARG 43 2.390 40.170 -5.530 1.00 0.00 ATOM 330 O ARG 43 1.989 39.021 -5.291 1.00 0.00 ATOM 331 CB ARG 43 3.221 41.621 -3.540 1.00 0.00 ATOM 332 CG ARG 43 4.240 41.983 -2.525 1.00 0.00 ATOM 333 CD ARG 43 4.763 40.782 -1.737 1.00 0.00 ATOM 334 NE ARG 43 3.774 40.426 -0.751 1.00 0.00 ATOM 335 CZ ARG 43 3.224 39.246 -0.657 1.00 0.00 ATOM 336 NH1 ARG 43 3.545 38.247 -1.428 1.00 0.00 ATOM 337 NH2 ARG 43 2.314 39.078 0.251 1.00 0.00 ATOM 338 N SER 44 1.903 40.817 -6.582 1.00 0.00 ATOM 339 CA SER 44 0.664 40.294 -7.170 1.00 0.00 ATOM 340 C SER 44 0.480 40.602 -8.660 1.00 0.00 ATOM 341 O SER 44 1.476 40.717 -9.391 1.00 0.00 ATOM 342 CB SER 44 -0.439 40.983 -6.412 1.00 0.00 ATOM 343 OG SER 44 -1.691 40.390 -6.283 1.00 0.00 ATOM 344 N LYS 45 -0.674 40.094 -9.157 1.00 0.00 ATOM 345 CA LYS 45 -1.146 40.338 -10.549 1.00 0.00 ATOM 346 C LYS 45 -0.838 41.861 -10.861 1.00 0.00 ATOM 347 O LYS 45 -0.238 42.188 -11.902 1.00 0.00 ATOM 348 CB LYS 45 -2.622 39.991 -10.711 1.00 0.00 ATOM 349 CG LYS 45 -3.104 38.563 -10.542 1.00 0.00 ATOM 350 CD LYS 45 -2.560 37.474 -11.444 1.00 0.00 ATOM 351 CE LYS 45 -3.281 36.161 -11.192 1.00 0.00 ATOM 352 NZ LYS 45 -3.072 35.205 -12.266 1.00 0.00 TER END