####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS044_5-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS044_5-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 29 17 - 45 4.83 7.86 LCS_AVERAGE: 62.96 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 16 20 - 35 1.89 9.87 LCS_AVERAGE: 24.64 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 14 20 - 33 0.76 10.05 LCS_AVERAGE: 17.77 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 6 25 3 3 4 4 5 7 10 10 12 13 16 22 27 30 32 34 37 38 39 40 LCS_GDT V 3 V 3 4 6 25 3 3 4 5 5 7 10 12 16 17 22 22 27 30 32 34 37 38 39 40 LCS_GDT Q 4 Q 4 4 6 25 3 3 4 5 5 7 10 12 16 17 22 22 25 28 31 34 37 38 39 40 LCS_GDT G 5 G 5 4 6 25 0 3 4 5 6 7 10 12 16 17 22 22 27 28 28 32 35 38 39 40 LCS_GDT P 6 P 6 4 6 25 3 3 5 5 9 13 14 19 20 24 26 27 29 30 32 34 37 38 39 40 LCS_GDT W 7 W 7 4 6 25 3 3 7 11 16 18 20 22 24 26 27 29 29 30 32 34 37 38 39 40 LCS_GDT V 8 V 8 5 6 25 4 6 6 10 16 18 20 23 25 26 27 29 30 31 34 34 37 38 39 40 LCS_GDT G 9 G 9 5 6 25 4 4 5 13 14 16 19 23 25 26 27 29 30 31 34 34 37 38 39 40 LCS_GDT S 10 S 10 5 6 25 4 4 5 6 8 10 14 17 18 19 23 28 30 31 34 34 37 38 39 40 LCS_GDT S 11 S 11 5 6 25 4 4 5 6 8 10 11 15 18 23 25 28 30 31 34 34 37 38 39 40 LCS_GDT Y 12 Y 12 5 6 25 4 4 5 5 8 10 11 13 16 18 23 27 30 31 34 34 37 38 39 40 LCS_GDT V 13 V 13 5 6 25 4 5 5 5 6 6 9 12 15 17 23 27 29 31 34 34 37 38 39 40 LCS_GDT A 14 A 14 5 5 25 4 5 5 5 8 10 11 13 16 17 22 22 24 27 29 33 34 36 39 40 LCS_GDT E 15 E 15 5 5 25 4 5 5 5 5 5 9 13 16 17 22 22 22 23 26 29 32 35 37 40 LCS_GDT T 16 T 16 5 5 28 4 5 5 6 8 10 11 13 16 17 22 23 27 31 34 34 37 38 39 40 LCS_GDT G 17 G 17 5 5 29 3 5 5 5 5 5 8 10 13 16 22 24 27 31 34 34 37 38 39 40 LCS_GDT Q 18 Q 18 4 4 29 3 3 4 6 8 10 11 13 16 17 23 27 29 31 34 34 37 38 39 40 LCS_GDT N 19 N 19 4 15 29 3 3 4 4 5 8 14 19 23 25 26 28 30 31 34 34 37 38 39 40 LCS_GDT W 20 W 20 14 16 29 8 12 14 14 14 15 17 23 25 26 27 29 30 31 34 34 37 38 39 40 LCS_GDT A 21 A 21 14 16 29 10 12 14 14 14 16 19 23 25 26 27 29 30 31 34 34 37 38 39 40 LCS_GDT S 22 S 22 14 16 29 10 12 14 14 16 18 20 23 25 26 27 29 30 31 34 34 37 38 39 40 LCS_GDT L 23 L 23 14 16 29 10 12 14 14 16 18 20 23 25 26 27 29 30 31 34 34 37 38 39 40 LCS_GDT A 24 A 24 14 16 29 10 12 14 14 16 18 20 23 25 26 27 29 30 31 34 34 37 38 39 40 LCS_GDT A 25 A 25 14 16 29 10 12 14 14 16 18 20 23 25 26 27 29 30 31 34 34 37 38 39 40 LCS_GDT N 26 N 26 14 16 29 10 12 14 14 16 18 20 23 25 26 27 29 30 31 34 34 37 38 39 40 LCS_GDT E 27 E 27 14 16 29 10 12 14 14 16 18 20 23 25 26 27 29 30 31 34 34 37 38 39 40 LCS_GDT L 28 L 28 14 16 29 10 12 14 14 16 18 20 23 25 26 27 29 30 31 34 34 37 38 39 40 LCS_GDT R 29 R 29 14 16 29 10 12 14 14 16 18 20 23 25 26 27 29 30 31 34 34 37 38 39 40 LCS_GDT V 30 V 30 14 16 29 10 12 14 14 16 18 20 23 25 26 27 29 30 31 34 34 37 38 39 40 LCS_GDT T 31 T 31 14 16 29 3 12 14 14 16 18 20 23 25 26 27 29 30 31 34 34 37 38 39 40 LCS_GDT E 32 E 32 14 16 29 6 12 14 14 16 18 20 23 25 26 27 29 30 31 34 34 37 38 39 40 LCS_GDT R 33 R 33 14 16 29 5 9 14 14 16 18 20 23 25 26 27 29 30 31 34 34 37 38 39 40 LCS_GDT P 34 P 34 4 16 29 2 4 5 5 8 13 15 20 22 25 27 29 30 31 34 34 37 38 39 40 LCS_GDT F 35 F 35 5 16 29 2 5 7 10 16 18 20 23 25 26 27 29 30 31 34 34 37 38 39 40 LCS_GDT W 36 W 36 5 11 29 5 6 7 10 13 18 20 23 25 26 27 29 30 31 34 34 37 38 39 40 LCS_GDT I 37 I 37 5 11 29 5 6 7 11 16 18 20 23 25 26 27 29 30 31 34 34 37 38 39 40 LCS_GDT S 38 S 38 5 11 29 5 6 7 10 12 18 20 23 25 26 27 29 30 31 34 34 37 38 39 40 LCS_GDT S 39 S 39 6 11 29 5 6 7 10 12 15 20 23 25 26 27 29 30 31 34 34 37 38 39 40 LCS_GDT F 40 F 40 6 11 29 4 5 7 10 12 17 20 23 25 26 27 29 30 31 34 34 37 38 39 40 LCS_GDT I 41 I 41 6 11 29 4 5 6 10 15 18 20 23 25 26 27 29 30 31 34 34 37 38 39 40 LCS_GDT G 42 G 42 6 11 29 4 5 6 10 12 16 20 23 25 26 27 29 30 31 34 34 37 38 38 40 LCS_GDT R 43 R 43 6 11 29 4 5 7 10 12 14 18 23 25 26 27 29 30 31 34 34 35 38 38 40 LCS_GDT S 44 S 44 6 11 29 4 5 7 10 12 14 16 18 20 25 27 29 29 30 31 32 33 35 35 36 LCS_GDT K 45 K 45 6 11 29 3 4 7 10 12 14 16 18 20 23 26 29 29 30 30 32 33 33 34 35 LCS_AVERAGE LCS_A: 35.12 ( 17.77 24.64 62.96 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 12 14 14 16 18 20 23 25 26 27 29 30 31 34 34 37 38 39 40 GDT PERCENT_AT 22.73 27.27 31.82 31.82 36.36 40.91 45.45 52.27 56.82 59.09 61.36 65.91 68.18 70.45 77.27 77.27 84.09 86.36 88.64 90.91 GDT RMS_LOCAL 0.32 0.58 0.76 0.76 1.82 2.10 2.33 2.74 2.93 3.03 3.16 3.56 3.99 4.31 5.01 5.01 5.89 6.03 6.24 6.22 GDT RMS_ALL_AT 9.89 9.72 10.05 10.05 8.75 8.63 8.50 8.19 8.26 8.37 8.41 8.77 7.74 7.63 7.50 7.50 7.33 7.38 7.41 7.21 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 13.215 0 0.062 0.084 14.327 0.000 0.000 - LGA V 3 V 3 12.245 0 0.053 0.141 12.733 0.000 0.000 11.202 LGA Q 4 Q 4 14.128 0 0.377 0.877 16.905 0.000 0.000 15.225 LGA G 5 G 5 12.352 0 0.151 0.151 13.113 0.000 0.000 - LGA P 6 P 6 8.855 0 0.678 0.594 10.965 0.000 0.000 9.412 LGA W 7 W 7 4.813 0 0.420 1.201 9.777 11.818 5.714 9.454 LGA V 8 V 8 2.300 0 0.634 0.880 6.496 28.636 19.740 6.496 LGA G 9 G 9 4.446 0 0.173 0.173 7.422 5.909 5.909 - LGA S 10 S 10 9.589 0 0.069 0.192 12.004 0.000 0.000 8.500 LGA S 11 S 11 9.069 0 0.253 0.641 11.924 0.000 0.000 9.120 LGA Y 12 Y 12 10.206 0 0.601 1.218 13.912 0.000 0.909 5.086 LGA V 13 V 13 13.825 0 0.637 0.614 15.344 0.000 0.000 15.344 LGA A 14 A 14 17.923 0 0.027 0.027 19.544 0.000 0.000 - LGA E 15 E 15 18.924 0 0.018 1.449 26.316 0.000 0.000 26.316 LGA T 16 T 16 14.715 0 0.142 1.130 15.928 0.000 0.000 13.587 LGA G 17 G 17 14.155 0 0.190 0.190 14.155 0.000 0.000 - LGA Q 18 Q 18 12.257 0 0.595 0.975 19.699 0.000 0.000 16.683 LGA N 19 N 19 7.316 0 0.047 0.993 11.394 0.455 0.227 11.394 LGA W 20 W 20 4.660 0 0.579 1.464 15.349 6.364 1.818 15.349 LGA A 21 A 21 3.744 0 0.035 0.037 4.205 20.455 17.455 - LGA S 22 S 22 1.802 0 0.049 0.619 2.658 56.364 48.485 2.636 LGA L 23 L 23 1.626 0 0.044 0.189 4.211 66.364 41.818 4.211 LGA A 24 A 24 1.289 0 0.018 0.022 2.146 65.455 60.000 - LGA A 25 A 25 1.666 0 0.048 0.050 2.303 51.364 51.273 - LGA N 26 N 26 1.629 0 0.054 0.073 2.397 51.364 51.136 1.727 LGA E 27 E 27 1.772 0 0.053 0.828 4.361 45.455 41.414 4.361 LGA L 28 L 28 2.705 0 0.038 0.079 3.584 23.636 26.818 2.645 LGA R 29 R 29 3.261 0 0.050 1.561 10.799 18.636 8.430 10.799 LGA V 30 V 30 3.066 0 0.072 0.102 3.306 25.000 23.377 3.122 LGA T 31 T 31 2.493 0 0.045 0.059 2.708 35.455 35.065 2.450 LGA E 32 E 32 2.449 0 0.157 0.791 3.703 35.455 26.061 2.973 LGA R 33 R 33 2.913 0 0.122 1.338 6.062 14.091 11.570 3.630 LGA P 34 P 34 5.568 0 0.415 0.599 8.170 2.727 1.558 8.170 LGA F 35 F 35 1.764 0 0.581 1.391 8.903 47.727 18.678 8.903 LGA W 36 W 36 3.172 0 0.018 1.241 9.945 30.455 10.260 6.769 LGA I 37 I 37 2.117 0 0.048 0.376 3.609 38.636 30.909 3.609 LGA S 38 S 38 3.352 0 0.015 0.073 4.342 15.455 12.121 4.342 LGA S 39 S 39 3.812 0 0.127 0.166 4.724 14.545 10.303 4.611 LGA F 40 F 40 2.524 0 0.072 0.900 4.032 38.636 26.281 4.032 LGA I 41 I 41 2.304 0 0.641 1.556 6.399 38.636 23.409 6.399 LGA G 42 G 42 3.805 0 0.060 0.060 5.296 8.636 8.636 - LGA R 43 R 43 5.126 0 0.021 1.166 11.375 1.364 0.826 11.375 LGA S 44 S 44 8.014 0 0.095 0.681 10.268 0.000 0.000 10.268 LGA K 45 K 45 9.209 0 0.669 0.747 13.343 0.000 0.000 13.343 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 7.126 7.063 8.013 18.161 14.095 6.701 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 23 2.74 47.159 42.483 0.810 LGA_LOCAL RMSD: 2.741 Number of atoms: 23 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 8.186 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 7.126 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.909223 * X + 0.012455 * Y + -0.416124 * Z + 2.609870 Y_new = 0.402269 * X + 0.283689 * Y + -0.870460 * Z + 70.580772 Z_new = 0.107208 * X + -0.958836 * Y + -0.262946 * Z + 19.795898 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.725050 -0.107414 -1.838451 [DEG: 156.1339 -6.1544 -105.3355 ] ZXZ: -0.445934 1.836871 3.030245 [DEG: -25.5502 105.2450 173.6202 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS044_5-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS044_5-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 23 2.74 42.483 7.13 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS044_5-D1 PFRMAT TS TARGET T0953s2 MODEL 5 PARENT N/A ATOM 20 N ALA 2 -1.460 29.201 13.254 1.00 6.29 N ATOM 21 CA ALA 2 -0.964 29.892 12.064 1.00 6.29 C ATOM 22 C ALA 2 -0.915 28.978 10.839 1.00 6.29 C ATOM 23 O ALA 2 -0.600 27.784 10.944 1.00 6.29 O ATOM 24 CB ALA 2 0.408 30.453 12.341 1.00 6.29 C ATOM 30 N VAL 3 -1.205 29.564 9.675 1.00 7.77 N ATOM 31 CA VAL 3 -1.218 28.860 8.395 1.00 7.77 C ATOM 32 C VAL 3 0.150 28.310 8.016 1.00 7.77 C ATOM 33 O VAL 3 1.138 29.040 7.947 1.00 7.77 O ATOM 34 CB VAL 3 -1.671 29.821 7.278 1.00 7.77 C ATOM 35 CG1 VAL 3 -1.553 29.152 5.940 1.00 7.77 C ATOM 36 CG2 VAL 3 -3.105 30.270 7.517 1.00 7.77 C ATOM 46 N GLN 4 0.201 27.026 7.685 1.00 6.95 N ATOM 47 CA GLN 4 1.472 26.392 7.354 1.00 6.95 C ATOM 48 C GLN 4 1.832 26.540 5.874 1.00 6.95 C ATOM 49 O GLN 4 1.828 25.573 5.111 1.00 6.95 O ATOM 50 CB GLN 4 1.426 24.924 7.769 1.00 6.95 C ATOM 51 CG GLN 4 1.176 24.732 9.278 1.00 6.95 C ATOM 52 CD GLN 4 2.309 25.274 10.150 1.00 6.95 C ATOM 53 OE1 GLN 4 3.439 24.772 10.100 1.00 6.95 O ATOM 54 NE2 GLN 4 2.011 26.296 10.959 1.00 6.95 N ATOM 63 N GLY 5 2.118 27.776 5.494 1.00 5.41 N ATOM 64 CA GLY 5 2.466 28.148 4.124 1.00 5.41 C ATOM 65 C GLY 5 3.933 28.585 4.055 1.00 5.41 C ATOM 66 O GLY 5 4.752 28.122 4.850 1.00 5.41 O ATOM 70 N PRO 6 4.298 29.448 3.089 1.00 4.11 N ATOM 71 CA PRO 6 5.623 30.011 2.891 1.00 4.11 C ATOM 72 C PRO 6 6.142 30.759 4.114 1.00 4.11 C ATOM 73 O PRO 6 5.377 31.295 4.918 1.00 4.11 O ATOM 74 CB PRO 6 5.416 30.951 1.703 1.00 4.11 C ATOM 75 CG PRO 6 4.240 30.359 0.936 1.00 4.11 C ATOM 76 CD PRO 6 3.339 29.764 1.987 1.00 4.11 C ATOM 84 N TRP 7 7.461 30.752 4.270 1.00 4.47 N ATOM 85 CA TRP 7 8.177 31.412 5.367 1.00 4.47 C ATOM 86 C TRP 7 7.926 32.927 5.502 1.00 4.47 C ATOM 87 O TRP 7 8.101 33.488 6.586 1.00 4.47 O ATOM 88 CB TRP 7 9.677 31.140 5.194 1.00 4.47 C ATOM 89 CG TRP 7 10.290 31.839 4.014 1.00 4.47 C ATOM 90 CD1 TRP 7 10.351 31.394 2.726 1.00 4.47 C ATOM 91 CD2 TRP 7 11.008 33.096 4.039 1.00 4.47 C ATOM 92 NE1 TRP 7 11.014 32.309 1.941 1.00 4.47 N ATOM 93 CE2 TRP 7 11.425 33.355 2.731 1.00 4.47 C ATOM 94 CE3 TRP 7 11.327 34.011 5.057 1.00 4.47 C ATOM 95 CZ2 TRP 7 12.131 34.500 2.401 1.00 4.47 C ATOM 96 CZ3 TRP 7 12.038 35.158 4.724 1.00 4.47 C ATOM 97 CH2 TRP 7 12.425 35.396 3.430 1.00 4.47 C ATOM 108 N VAL 8 7.547 33.595 4.405 1.00 3.94 N ATOM 109 CA VAL 8 7.363 35.045 4.425 1.00 3.94 C ATOM 110 C VAL 8 6.011 35.474 3.880 1.00 3.94 C ATOM 111 O VAL 8 5.529 34.954 2.874 1.00 3.94 O ATOM 112 CB VAL 8 8.463 35.711 3.584 1.00 3.94 C ATOM 113 CG1 VAL 8 8.323 35.272 2.144 1.00 3.94 C ATOM 114 CG2 VAL 8 8.444 37.217 3.735 1.00 3.94 C ATOM 124 N GLY 9 5.433 36.487 4.512 1.00 4.00 N ATOM 125 CA GLY 9 4.131 37.029 4.141 1.00 4.00 C ATOM 126 C GLY 9 4.010 37.486 2.681 1.00 4.00 C ATOM 127 O GLY 9 2.933 37.419 2.084 1.00 4.00 O ATOM 131 N SER 10 5.113 37.933 2.093 1.00 3.94 N ATOM 132 CA SER 10 5.138 38.416 0.716 1.00 3.94 C ATOM 133 C SER 10 4.836 37.331 -0.326 1.00 3.94 C ATOM 134 O SER 10 4.576 37.644 -1.489 1.00 3.94 O ATOM 135 CB SER 10 6.478 39.058 0.410 1.00 3.94 C ATOM 136 OG SER 10 7.509 38.115 0.421 1.00 3.94 O ATOM 142 N SER 11 4.901 36.061 0.073 1.00 4.07 N ATOM 143 CA SER 11 4.634 34.945 -0.827 1.00 4.07 C ATOM 144 C SER 11 3.187 34.431 -0.766 1.00 4.07 C ATOM 145 O SER 11 2.856 33.434 -1.410 1.00 4.07 O ATOM 146 CB SER 11 5.592 33.816 -0.539 1.00 4.07 C ATOM 147 OG SER 11 6.915 34.187 -0.828 1.00 4.07 O ATOM 153 N TYR 12 2.332 35.086 0.020 1.00 4.06 N ATOM 154 CA TYR 12 0.956 34.618 0.195 1.00 4.06 C ATOM 155 C TYR 12 -0.142 35.237 -0.664 1.00 4.06 C ATOM 156 O TYR 12 -0.169 36.436 -0.947 1.00 4.06 O ATOM 157 CB TYR 12 0.562 34.819 1.653 1.00 4.06 C ATOM 158 CG TYR 12 1.149 33.832 2.573 1.00 4.06 C ATOM 159 CD1 TYR 12 2.463 33.890 2.897 1.00 4.06 C ATOM 160 CD2 TYR 12 0.330 32.884 3.135 1.00 4.06 C ATOM 161 CE1 TYR 12 2.980 32.985 3.760 1.00 4.06 C ATOM 162 CE2 TYR 12 0.830 31.971 4.024 1.00 4.06 C ATOM 163 CZ TYR 12 2.157 32.015 4.334 1.00 4.06 C ATOM 164 OH TYR 12 2.687 31.120 5.216 1.00 4.06 O ATOM 174 N VAL 13 -1.110 34.382 -0.994 1.00 4.15 N ATOM 175 CA VAL 13 -2.368 34.763 -1.622 1.00 4.15 C ATOM 176 C VAL 13 -3.044 35.605 -0.583 1.00 4.15 C ATOM 177 O VAL 13 -3.021 35.218 0.582 1.00 4.15 O ATOM 178 CB VAL 13 -3.225 33.526 -1.947 1.00 4.15 C ATOM 179 CG1 VAL 13 -4.608 33.948 -2.445 1.00 4.15 C ATOM 180 CG2 VAL 13 -2.509 32.691 -2.987 1.00 4.15 C ATOM 190 N ALA 14 -3.631 36.739 -0.942 1.00 3.91 N ATOM 191 CA ALA 14 -4.180 37.573 0.115 1.00 3.91 C ATOM 192 C ALA 14 -5.173 36.849 1.020 1.00 3.91 C ATOM 193 O ALA 14 -5.099 37.014 2.228 1.00 3.91 O ATOM 194 CB ALA 14 -4.859 38.791 -0.474 1.00 3.91 C ATOM 200 N GLU 15 -6.045 35.996 0.495 1.00 3.54 N ATOM 201 CA GLU 15 -6.991 35.348 1.406 1.00 3.54 C ATOM 202 C GLU 15 -6.275 34.453 2.433 1.00 3.54 C ATOM 203 O GLU 15 -6.629 34.425 3.620 1.00 3.54 O ATOM 204 CB GLU 15 -7.999 34.520 0.604 1.00 3.54 C ATOM 205 CG GLU 15 -8.980 35.350 -0.226 1.00 3.54 C ATOM 206 CD GLU 15 -9.913 34.507 -1.065 1.00 3.54 C ATOM 207 OE1 GLU 15 -9.726 33.313 -1.113 1.00 3.54 O ATOM 208 OE2 GLU 15 -10.813 35.059 -1.655 1.00 3.54 O ATOM 215 N THR 16 -5.249 33.738 1.976 1.00 3.04 N ATOM 216 CA THR 16 -4.504 32.833 2.836 1.00 3.04 C ATOM 217 C THR 16 -3.662 33.629 3.823 1.00 3.04 C ATOM 218 O THR 16 -3.560 33.295 5.006 1.00 3.04 O ATOM 219 CB THR 16 -3.596 31.904 2.019 1.00 3.04 C ATOM 220 OG1 THR 16 -4.383 31.123 1.106 1.00 3.04 O ATOM 221 CG2 THR 16 -2.886 30.977 2.954 1.00 3.04 C ATOM 229 N GLY 17 -3.026 34.673 3.306 1.00 2.95 N ATOM 230 CA GLY 17 -2.176 35.551 4.078 1.00 2.95 C ATOM 231 C GLY 17 -2.957 36.261 5.174 1.00 2.95 C ATOM 232 O GLY 17 -2.432 36.550 6.256 1.00 2.95 O ATOM 236 N GLN 18 -4.213 36.591 4.889 1.00 2.96 N ATOM 237 CA GLN 18 -5.064 37.202 5.886 1.00 2.96 C ATOM 238 C GLN 18 -5.302 36.201 7.004 1.00 2.96 C ATOM 239 O GLN 18 -5.170 36.539 8.183 1.00 2.96 O ATOM 240 CB GLN 18 -6.359 37.672 5.238 1.00 2.96 C ATOM 241 CG GLN 18 -6.197 38.917 4.337 1.00 2.96 C ATOM 242 CD GLN 18 -7.419 39.234 3.501 1.00 2.96 C ATOM 243 OE1 GLN 18 -8.529 38.742 3.748 1.00 2.96 O ATOM 244 NE2 GLN 18 -7.222 40.067 2.476 1.00 2.96 N ATOM 253 N ASN 19 -5.536 34.932 6.642 1.00 2.58 N ATOM 254 CA ASN 19 -5.702 33.908 7.662 1.00 2.58 C ATOM 255 C ASN 19 -4.412 33.700 8.451 1.00 2.58 C ATOM 256 O ASN 19 -4.465 33.538 9.672 1.00 2.58 O ATOM 257 CB ASN 19 -6.184 32.604 7.063 1.00 2.58 C ATOM 258 CG ASN 19 -7.634 32.648 6.683 1.00 2.58 C ATOM 259 OD1 ASN 19 -8.408 33.467 7.200 1.00 2.58 O ATOM 260 ND2 ASN 19 -8.031 31.776 5.789 1.00 2.58 N ATOM 267 N TRP 20 -3.243 33.778 7.796 1.00 2.27 N ATOM 268 CA TRP 20 -1.994 33.610 8.543 1.00 2.27 C ATOM 269 C TRP 20 -1.907 34.667 9.619 1.00 2.27 C ATOM 270 O TRP 20 -1.675 34.357 10.782 1.00 2.27 O ATOM 271 CB TRP 20 -0.716 33.661 7.683 1.00 2.27 C ATOM 272 CG TRP 20 0.579 33.484 8.561 1.00 2.27 C ATOM 273 CD1 TRP 20 0.582 33.238 9.887 1.00 2.27 C ATOM 274 CD2 TRP 20 2.000 33.531 8.182 1.00 2.27 C ATOM 275 NE1 TRP 20 1.893 33.147 10.362 1.00 2.27 N ATOM 276 CE2 TRP 20 2.747 33.324 9.338 1.00 2.27 C ATOM 277 CE3 TRP 20 2.668 33.738 7.003 1.00 2.27 C ATOM 278 CZ2 TRP 20 4.135 33.316 9.326 1.00 2.27 C ATOM 279 CZ3 TRP 20 4.066 33.736 6.982 1.00 2.27 C ATOM 280 CH2 TRP 20 4.774 33.529 8.110 1.00 2.27 C ATOM 291 N ALA 21 -2.069 35.933 9.233 1.00 2.35 N ATOM 292 CA ALA 21 -1.965 37.004 10.215 1.00 2.35 C ATOM 293 C ALA 21 -3.020 36.875 11.313 1.00 2.35 C ATOM 294 O ALA 21 -2.726 37.108 12.487 1.00 2.35 O ATOM 295 CB ALA 21 -2.093 38.347 9.531 1.00 2.35 C ATOM 301 N SER 22 -4.246 36.479 10.954 1.00 2.96 N ATOM 302 CA SER 22 -5.313 36.365 11.943 1.00 2.96 C ATOM 303 C SER 22 -4.993 35.304 12.981 1.00 2.96 C ATOM 304 O SER 22 -5.065 35.528 14.195 1.00 2.96 O ATOM 305 CB SER 22 -6.619 36.010 11.253 1.00 2.96 C ATOM 306 OG SER 22 -7.681 35.907 12.170 1.00 2.96 O ATOM 312 N LEU 23 -4.635 34.137 12.490 1.00 3.10 N ATOM 313 CA LEU 23 -4.351 33.010 13.335 1.00 3.10 C ATOM 314 C LEU 23 -3.072 33.251 14.138 1.00 3.10 C ATOM 315 O LEU 23 -3.017 32.941 15.333 1.00 3.10 O ATOM 316 CB LEU 23 -4.316 31.799 12.425 1.00 3.10 C ATOM 317 CG LEU 23 -5.709 31.465 11.827 1.00 3.10 C ATOM 318 CD1 LEU 23 -5.609 30.429 10.723 1.00 3.10 C ATOM 319 CD2 LEU 23 -6.596 30.955 12.950 1.00 3.10 C ATOM 331 N ALA 24 -2.063 33.868 13.506 1.00 2.88 N ATOM 332 CA ALA 24 -0.830 34.202 14.201 1.00 2.88 C ATOM 333 C ALA 24 -1.109 35.194 15.310 1.00 2.88 C ATOM 334 O ALA 24 -0.559 35.073 16.397 1.00 2.88 O ATOM 335 CB ALA 24 0.182 34.795 13.250 1.00 2.88 C ATOM 341 N ALA 25 -1.997 36.152 15.068 1.00 2.92 N ATOM 342 CA ALA 25 -2.330 37.146 16.068 1.00 2.92 C ATOM 343 C ALA 25 -2.861 36.476 17.309 1.00 2.92 C ATOM 344 O ALA 25 -2.591 36.902 18.435 1.00 2.92 O ATOM 345 CB ALA 25 -3.346 38.097 15.513 1.00 2.92 C ATOM 351 N ASN 26 -3.620 35.398 17.128 1.00 3.29 N ATOM 352 CA ASN 26 -4.112 34.709 18.299 1.00 3.29 C ATOM 353 C ASN 26 -2.923 34.057 19.036 1.00 3.29 C ATOM 354 O ASN 26 -2.781 34.207 20.253 1.00 3.29 O ATOM 355 CB ASN 26 -5.156 33.682 17.915 1.00 3.29 C ATOM 356 CG ASN 26 -6.450 34.279 17.461 1.00 3.29 C ATOM 357 OD1 ASN 26 -6.775 35.445 17.725 1.00 3.29 O ATOM 358 ND2 ASN 26 -7.218 33.480 16.770 1.00 3.29 N ATOM 365 N GLU 27 -2.002 33.427 18.284 1.00 3.43 N ATOM 366 CA GLU 27 -0.834 32.752 18.890 1.00 3.43 C ATOM 367 C GLU 27 0.071 33.742 19.630 1.00 3.43 C ATOM 368 O GLU 27 0.648 33.437 20.676 1.00 3.43 O ATOM 369 CB GLU 27 0.046 32.045 17.829 1.00 3.43 C ATOM 370 CG GLU 27 -0.563 30.829 17.133 1.00 3.43 C ATOM 371 CD GLU 27 0.379 30.133 16.156 1.00 3.43 C ATOM 372 OE1 GLU 27 1.447 30.637 15.908 1.00 3.43 O ATOM 373 OE2 GLU 27 0.012 29.074 15.651 1.00 3.43 O ATOM 380 N LEU 28 0.181 34.928 19.053 1.00 3.35 N ATOM 381 CA LEU 28 1.019 36.022 19.502 1.00 3.35 C ATOM 382 C LEU 28 0.362 36.908 20.564 1.00 3.35 C ATOM 383 O LEU 28 0.970 37.878 21.014 1.00 3.35 O ATOM 384 CB LEU 28 1.358 36.887 18.287 1.00 3.35 C ATOM 385 CG LEU 28 2.203 36.246 17.191 1.00 3.35 C ATOM 386 CD1 LEU 28 2.240 37.201 16.005 1.00 3.35 C ATOM 387 CD2 LEU 28 3.585 35.970 17.720 1.00 3.35 C ATOM 399 N ARG 29 -0.886 36.605 20.942 1.00 3.21 N ATOM 400 CA ARG 29 -1.650 37.392 21.914 1.00 3.21 C ATOM 401 C ARG 29 -1.802 38.866 21.511 1.00 3.21 C ATOM 402 O ARG 29 -1.690 39.768 22.347 1.00 3.21 O ATOM 403 CB ARG 29 -0.999 37.317 23.290 1.00 3.21 C ATOM 404 CG ARG 29 -0.896 35.910 23.870 1.00 3.21 C ATOM 405 CD ARG 29 -0.310 35.924 25.241 1.00 3.21 C ATOM 406 NE ARG 29 -0.176 34.582 25.793 1.00 3.21 N ATOM 407 CZ ARG 29 0.383 34.298 26.987 1.00 3.21 C ATOM 408 NH1 ARG 29 0.852 35.268 27.742 1.00 3.21 N ATOM 409 NH2 ARG 29 0.461 33.045 27.400 1.00 3.21 N ATOM 423 N VAL 30 -2.079 39.106 20.233 1.00 3.02 N ATOM 424 CA VAL 30 -2.275 40.450 19.702 1.00 3.02 C ATOM 425 C VAL 30 -3.726 40.900 19.858 1.00 3.02 C ATOM 426 O VAL 30 -4.653 40.186 19.484 1.00 3.02 O ATOM 427 CB VAL 30 -1.833 40.467 18.228 1.00 3.02 C ATOM 428 CG1 VAL 30 -2.101 41.808 17.562 1.00 3.02 C ATOM 429 CG2 VAL 30 -0.373 40.126 18.180 1.00 3.02 C ATOM 439 N THR 31 -3.916 42.094 20.430 1.00 3.45 N ATOM 440 CA THR 31 -5.253 42.647 20.664 1.00 3.45 C ATOM 441 C THR 31 -5.666 43.636 19.572 1.00 3.45 C ATOM 442 O THR 31 -6.806 44.099 19.527 1.00 3.45 O ATOM 443 CB THR 31 -5.302 43.341 22.034 1.00 3.45 C ATOM 444 OG1 THR 31 -4.374 44.437 22.048 1.00 3.45 O ATOM 445 CG2 THR 31 -4.924 42.350 23.134 1.00 3.45 C ATOM 453 N GLU 32 -4.714 43.959 18.716 1.00 3.74 N ATOM 454 CA GLU 32 -4.868 44.888 17.604 1.00 3.74 C ATOM 455 C GLU 32 -5.345 44.085 16.403 1.00 3.74 C ATOM 456 O GLU 32 -5.481 42.871 16.507 1.00 3.74 O ATOM 457 CB GLU 32 -3.557 45.638 17.373 1.00 3.74 C ATOM 458 CG GLU 32 -3.184 46.500 18.587 1.00 3.74 C ATOM 459 CD GLU 32 -1.888 47.234 18.472 1.00 3.74 C ATOM 460 OE1 GLU 32 -1.130 46.926 17.600 1.00 3.74 O ATOM 461 OE2 GLU 32 -1.660 48.109 19.274 1.00 3.74 O ATOM 468 N ARG 33 -5.707 44.745 15.308 1.00 3.45 N ATOM 469 CA ARG 33 -6.259 44.012 14.170 1.00 3.45 C ATOM 470 C ARG 33 -5.225 43.550 13.092 1.00 3.45 C ATOM 471 O ARG 33 -4.600 44.362 12.414 1.00 3.45 O ATOM 472 CB ARG 33 -7.342 44.842 13.530 1.00 3.45 C ATOM 473 CG ARG 33 -8.537 45.119 14.414 1.00 3.45 C ATOM 474 CD ARG 33 -9.419 43.910 14.511 1.00 3.45 C ATOM 475 NE ARG 33 -8.950 42.944 15.512 1.00 3.45 N ATOM 476 CZ ARG 33 -9.437 41.690 15.657 1.00 3.45 C ATOM 477 NH1 ARG 33 -10.410 41.264 14.879 1.00 3.45 N ATOM 478 NH2 ARG 33 -8.940 40.882 16.581 1.00 3.45 N ATOM 492 N PRO 34 -5.029 42.225 12.914 1.00 3.20 N ATOM 493 CA PRO 34 -4.054 41.587 12.028 1.00 3.20 C ATOM 494 C PRO 34 -4.487 41.499 10.572 1.00 3.20 C ATOM 495 O PRO 34 -4.741 40.423 10.055 1.00 3.20 O ATOM 496 CB PRO 34 -3.983 40.204 12.616 1.00 3.20 C ATOM 497 CG PRO 34 -5.364 39.960 13.154 1.00 3.20 C ATOM 498 CD PRO 34 -5.831 41.260 13.674 1.00 3.20 C ATOM 506 N PHE 35 -4.594 42.644 9.934 1.00 2.77 N ATOM 507 CA PHE 35 -5.126 42.748 8.565 1.00 2.77 C ATOM 508 C PHE 35 -4.643 41.724 7.555 1.00 2.77 C ATOM 509 O PHE 35 -5.441 41.078 6.886 1.00 2.77 O ATOM 510 CB PHE 35 -4.735 44.088 8.012 1.00 2.77 C ATOM 511 CG PHE 35 -5.339 45.093 8.730 1.00 2.77 C ATOM 512 CD1 PHE 35 -6.348 44.801 9.598 1.00 2.77 C ATOM 513 CD2 PHE 35 -4.920 46.342 8.600 1.00 2.77 C ATOM 514 CE1 PHE 35 -6.910 45.780 10.321 1.00 2.77 C ATOM 515 CE2 PHE 35 -5.489 47.290 9.321 1.00 2.77 C ATOM 516 CZ PHE 35 -6.499 46.999 10.201 1.00 2.77 C ATOM 526 N TRP 36 -3.330 41.665 7.362 1.00 2.95 N ATOM 527 CA TRP 36 -2.741 40.780 6.366 1.00 2.95 C ATOM 528 C TRP 36 -1.263 40.582 6.621 1.00 2.95 C ATOM 529 O TRP 36 -0.513 41.553 6.850 1.00 2.95 O ATOM 530 CB TRP 36 -3.033 41.348 4.960 1.00 2.95 C ATOM 531 CG TRP 36 -2.511 40.589 3.767 1.00 2.95 C ATOM 532 CD1 TRP 36 -2.206 39.298 3.696 1.00 2.95 C ATOM 533 CD2 TRP 36 -2.272 41.118 2.448 1.00 2.95 C ATOM 534 NE1 TRP 36 -1.750 38.975 2.456 1.00 2.95 N ATOM 535 CE2 TRP 36 -1.791 40.067 1.676 1.00 2.95 C ATOM 536 CE3 TRP 36 -2.421 42.383 1.869 1.00 2.95 C ATOM 537 CZ2 TRP 36 -1.446 40.221 0.349 1.00 2.95 C ATOM 538 CZ3 TRP 36 -2.079 42.543 0.533 1.00 2.95 C ATOM 539 CH2 TRP 36 -1.602 41.486 -0.208 1.00 2.95 C ATOM 550 N ILE 37 -0.833 39.335 6.492 1.00 2.93 N ATOM 551 CA ILE 37 0.522 38.917 6.716 1.00 2.93 C ATOM 552 C ILE 37 1.576 39.618 5.907 1.00 2.93 C ATOM 553 O ILE 37 2.706 39.737 6.363 1.00 2.93 O ATOM 554 CB ILE 37 0.689 37.441 6.518 1.00 2.93 C ATOM 555 CG1 ILE 37 1.914 37.052 7.149 1.00 2.93 C ATOM 556 CG2 ILE 37 0.700 37.085 5.060 1.00 2.93 C ATOM 557 CD1 ILE 37 1.874 37.121 8.671 1.00 2.93 C ATOM 569 N SER 38 1.218 40.156 4.730 1.00 3.27 N ATOM 570 CA SER 38 2.223 40.813 3.912 1.00 3.27 C ATOM 571 C SER 38 2.864 41.991 4.645 1.00 3.27 C ATOM 572 O SER 38 3.978 42.393 4.307 1.00 3.27 O ATOM 573 CB SER 38 1.625 41.280 2.602 1.00 3.27 C ATOM 574 OG SER 38 0.735 42.343 2.795 1.00 3.27 O ATOM 580 N SER 39 2.171 42.543 5.655 1.00 3.25 N ATOM 581 CA SER 39 2.762 43.610 6.442 1.00 3.25 C ATOM 582 C SER 39 2.888 43.176 7.901 1.00 3.25 C ATOM 583 O SER 39 3.834 43.556 8.588 1.00 3.25 O ATOM 584 CB SER 39 1.928 44.877 6.343 1.00 3.25 C ATOM 585 OG SER 39 0.642 44.701 6.886 1.00 3.25 O ATOM 591 N PHE 40 1.986 42.298 8.358 1.00 3.42 N ATOM 592 CA PHE 40 1.960 41.856 9.756 1.00 3.42 C ATOM 593 C PHE 40 3.284 41.155 10.101 1.00 3.42 C ATOM 594 O PHE 40 3.849 41.376 11.173 1.00 3.42 O ATOM 595 CB PHE 40 0.717 40.994 10.022 1.00 3.42 C ATOM 596 CG PHE 40 0.399 40.591 11.443 1.00 3.42 C ATOM 597 CD1 PHE 40 -0.158 41.505 12.331 1.00 3.42 C ATOM 598 CD2 PHE 40 0.587 39.283 11.874 1.00 3.42 C ATOM 599 CE1 PHE 40 -0.503 41.124 13.615 1.00 3.42 C ATOM 600 CE2 PHE 40 0.238 38.902 13.151 1.00 3.42 C ATOM 601 CZ PHE 40 -0.305 39.819 14.021 1.00 3.42 C ATOM 611 N ILE 41 3.792 40.325 9.179 1.00 3.46 N ATOM 612 CA ILE 41 5.034 39.582 9.386 1.00 3.46 C ATOM 613 C ILE 41 6.253 40.483 9.642 1.00 3.46 C ATOM 614 O ILE 41 7.256 40.016 10.184 1.00 3.46 O ATOM 615 CB ILE 41 5.345 38.683 8.162 1.00 3.46 C ATOM 616 CG1 ILE 41 6.383 37.642 8.539 1.00 3.46 C ATOM 617 CG2 ILE 41 5.829 39.509 6.956 1.00 3.46 C ATOM 618 CD1 ILE 41 5.876 36.662 9.563 1.00 3.46 C ATOM 630 N GLY 42 6.207 41.748 9.202 1.00 3.82 N ATOM 631 CA GLY 42 7.320 42.671 9.382 1.00 3.82 C ATOM 632 C GLY 42 7.179 43.561 10.617 1.00 3.82 C ATOM 633 O GLY 42 7.987 44.471 10.821 1.00 3.82 O ATOM 637 N ARG 43 6.155 43.329 11.432 1.00 3.65 N ATOM 638 CA ARG 43 5.927 44.195 12.581 1.00 3.65 C ATOM 639 C ARG 43 6.756 43.796 13.798 1.00 3.65 C ATOM 640 O ARG 43 7.086 42.625 13.998 1.00 3.65 O ATOM 641 CB ARG 43 4.463 44.190 12.969 1.00 3.65 C ATOM 642 CG ARG 43 3.505 44.648 11.876 1.00 3.65 C ATOM 643 CD ARG 43 3.647 46.080 11.514 1.00 3.65 C ATOM 644 NE ARG 43 2.580 46.505 10.613 1.00 3.65 N ATOM 645 CZ ARG 43 2.366 47.773 10.200 1.00 3.65 C ATOM 646 NH1 ARG 43 3.131 48.756 10.599 1.00 3.65 N ATOM 647 NH2 ARG 43 1.373 48.060 9.388 1.00 3.65 N ATOM 661 N SER 44 7.068 44.790 14.623 1.00 4.10 N ATOM 662 CA SER 44 7.743 44.596 15.901 1.00 4.10 C ATOM 663 C SER 44 6.728 44.133 16.935 1.00 4.10 C ATOM 664 O SER 44 5.526 44.148 16.674 1.00 4.10 O ATOM 665 CB SER 44 8.370 45.884 16.382 1.00 4.10 C ATOM 666 OG SER 44 7.368 46.780 16.729 1.00 4.10 O ATOM 672 N LYS 45 7.204 43.754 18.119 1.00 4.21 N ATOM 673 CA LYS 45 6.319 43.336 19.209 1.00 4.21 C ATOM 674 C LYS 45 5.361 44.463 19.647 1.00 4.21 C ATOM 675 O LYS 45 4.277 44.194 20.174 1.00 4.21 O ATOM 676 CB LYS 45 7.157 42.862 20.397 1.00 4.21 C ATOM 677 CG LYS 45 7.902 41.547 20.144 1.00 4.21 C ATOM 678 CD LYS 45 8.746 41.125 21.345 1.00 4.21 C ATOM 679 CE LYS 45 9.499 39.826 21.061 1.00 4.21 C ATOM 680 NZ LYS 45 10.363 39.421 22.203 1.00 4.21 N TER END