####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS043_5-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS043_5-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 43 2 - 44 4.98 5.18 LONGEST_CONTINUOUS_SEGMENT: 43 3 - 45 4.78 5.19 LCS_AVERAGE: 97.73 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 15 7 - 21 1.71 11.75 LONGEST_CONTINUOUS_SEGMENT: 15 19 - 33 1.98 9.04 LONGEST_CONTINUOUS_SEGMENT: 15 20 - 34 1.82 10.19 LCS_AVERAGE: 29.08 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 13 7 - 19 0.81 12.40 LONGEST_CONTINUOUS_SEGMENT: 13 20 - 32 0.79 9.80 LCS_AVERAGE: 22.73 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 3 43 3 3 3 3 4 4 5 7 12 13 13 14 14 16 18 21 23 24 37 38 LCS_GDT V 3 V 3 3 4 43 3 3 3 3 4 5 9 9 12 13 13 14 14 28 31 38 38 42 43 43 LCS_GDT Q 4 Q 4 4 6 43 3 3 5 5 10 13 20 24 31 33 36 37 38 39 40 41 41 42 43 43 LCS_GDT G 5 G 5 4 6 43 2 4 5 5 7 14 21 28 31 33 36 37 38 39 40 41 41 42 43 43 LCS_GDT P 6 P 6 4 14 43 3 4 5 5 6 9 13 21 27 33 36 37 38 39 40 41 41 42 43 43 LCS_GDT W 7 W 7 13 15 43 8 10 13 13 15 19 22 28 31 33 36 37 38 39 40 41 41 42 43 43 LCS_GDT V 8 V 8 13 15 43 9 11 13 14 18 20 25 28 31 33 36 37 38 39 40 41 41 42 43 43 LCS_GDT G 9 G 9 13 15 43 9 11 13 14 17 19 25 28 31 33 36 37 38 39 40 41 41 42 43 43 LCS_GDT S 10 S 10 13 15 43 9 11 13 13 15 16 21 26 31 33 36 37 38 39 40 41 41 42 43 43 LCS_GDT S 11 S 11 13 15 43 9 11 13 13 15 16 20 25 31 33 36 37 38 39 40 41 41 42 43 43 LCS_GDT Y 12 Y 12 13 15 43 9 11 13 13 15 15 19 24 31 33 36 37 38 39 40 41 41 42 43 43 LCS_GDT V 13 V 13 13 15 43 9 11 13 13 15 16 20 25 31 33 36 37 38 39 40 41 41 42 43 43 LCS_GDT A 14 A 14 13 15 43 9 11 13 13 15 15 17 23 25 29 35 37 38 39 40 41 41 42 43 43 LCS_GDT E 15 E 15 13 15 43 9 11 13 13 15 15 16 18 21 26 29 32 37 39 40 41 41 42 43 43 LCS_GDT T 16 T 16 13 15 43 9 11 13 13 15 15 16 18 21 26 32 35 38 39 40 41 41 42 43 43 LCS_GDT G 17 G 17 13 15 43 6 11 13 13 15 15 18 23 26 32 35 37 38 39 40 41 41 42 43 43 LCS_GDT Q 18 Q 18 13 15 43 6 11 13 13 15 19 22 28 31 33 36 37 38 39 40 41 41 42 43 43 LCS_GDT N 19 N 19 13 15 43 6 10 13 13 15 15 23 28 31 33 36 37 38 39 40 41 41 42 43 43 LCS_GDT W 20 W 20 13 15 43 9 11 13 13 14 18 21 23 27 29 30 34 37 38 40 41 41 42 43 43 LCS_GDT A 21 A 21 13 15 43 9 11 13 13 16 21 25 28 31 33 36 37 38 39 40 41 41 42 43 43 LCS_GDT S 22 S 22 13 15 43 9 11 13 16 19 21 25 28 31 33 36 37 38 39 40 41 41 42 43 43 LCS_GDT L 23 L 23 13 15 43 9 11 13 13 19 21 25 28 31 33 36 37 38 39 40 41 41 42 43 43 LCS_GDT A 24 A 24 13 15 43 9 11 13 13 19 21 25 28 31 33 36 37 38 39 40 41 41 42 43 43 LCS_GDT A 25 A 25 13 15 43 9 11 13 16 19 21 25 28 31 33 36 37 38 39 40 41 41 42 43 43 LCS_GDT N 26 N 26 13 15 43 9 11 13 16 19 21 25 28 31 33 36 37 38 39 40 41 41 42 43 43 LCS_GDT E 27 E 27 13 15 43 9 11 13 16 19 21 25 28 31 33 36 37 38 39 40 41 41 42 43 43 LCS_GDT L 28 L 28 13 15 43 9 11 13 16 19 21 25 28 30 33 36 37 38 39 40 41 41 42 43 43 LCS_GDT R 29 R 29 13 15 43 5 11 13 15 19 21 25 28 31 33 36 37 38 39 40 41 41 42 43 43 LCS_GDT V 30 V 30 13 15 43 5 11 13 16 19 21 25 28 31 33 36 37 38 39 40 41 41 42 43 43 LCS_GDT T 31 T 31 13 15 43 4 11 13 16 19 21 25 28 31 33 36 37 38 39 40 41 41 42 43 43 LCS_GDT E 32 E 32 13 15 43 4 10 13 16 19 21 25 28 31 33 36 37 38 39 40 41 41 42 43 43 LCS_GDT R 33 R 33 3 15 43 3 3 4 11 13 19 25 28 31 33 36 37 38 39 40 41 41 42 43 43 LCS_GDT P 34 P 34 3 15 43 3 3 4 5 6 10 16 22 26 29 36 37 38 39 40 41 41 42 43 43 LCS_GDT F 35 F 35 5 10 43 3 3 8 16 19 21 25 28 31 33 36 37 38 39 40 41 41 42 43 43 LCS_GDT W 36 W 36 8 10 43 4 4 12 16 19 21 25 28 31 33 36 37 38 39 40 41 41 42 43 43 LCS_GDT I 37 I 37 8 10 43 4 8 12 16 19 21 25 28 31 33 36 37 38 39 40 41 41 42 43 43 LCS_GDT S 38 S 38 8 10 43 4 8 12 16 19 21 25 28 31 33 36 37 38 39 40 41 41 42 43 43 LCS_GDT S 39 S 39 8 10 43 4 8 12 16 19 21 25 28 31 33 36 37 38 39 40 41 41 42 43 43 LCS_GDT F 40 F 40 8 10 43 4 8 12 16 19 21 25 28 31 33 36 37 38 39 40 41 41 42 43 43 LCS_GDT I 41 I 41 8 10 43 4 8 12 16 18 21 25 28 31 33 36 37 38 39 40 41 41 42 43 43 LCS_GDT G 42 G 42 8 10 43 4 6 12 14 18 20 25 28 31 33 36 37 38 39 40 41 41 42 43 43 LCS_GDT R 43 R 43 8 10 43 4 8 12 16 19 21 25 28 31 33 36 37 38 39 40 41 41 42 43 43 LCS_GDT S 44 S 44 6 10 43 0 4 9 14 19 21 25 28 30 32 36 36 37 38 40 41 41 42 43 43 LCS_GDT K 45 K 45 3 10 43 2 4 4 5 7 13 16 20 25 26 28 33 37 37 38 38 38 40 43 43 LCS_AVERAGE LCS_A: 49.85 ( 22.73 29.08 97.73 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 9 11 13 16 19 21 25 28 31 33 36 37 38 39 40 41 41 42 43 43 GDT PERCENT_AT 20.45 25.00 29.55 36.36 43.18 47.73 56.82 63.64 70.45 75.00 81.82 84.09 86.36 88.64 90.91 93.18 93.18 95.45 97.73 97.73 GDT RMS_LOCAL 0.20 0.50 0.79 1.55 1.74 1.92 2.31 2.67 3.10 3.26 3.50 3.72 3.86 4.01 4.10 4.26 4.26 4.55 4.78 4.78 GDT RMS_ALL_AT 11.91 9.92 9.80 7.18 7.50 7.35 6.61 6.02 5.42 5.36 5.36 5.30 5.32 5.36 5.28 5.29 5.29 5.23 5.19 5.19 # Checking swapping # possible swapping detected: F 35 F 35 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 16.194 0 0.681 0.621 17.106 0.000 0.000 - LGA V 3 V 3 13.158 0 0.565 0.591 16.230 0.000 0.000 12.977 LGA Q 4 Q 4 7.188 0 0.643 1.541 9.292 0.455 0.202 8.466 LGA G 5 G 5 4.432 0 0.502 0.502 7.827 1.818 1.818 - LGA P 6 P 6 6.698 0 0.119 0.432 9.059 0.455 0.260 9.059 LGA W 7 W 7 3.559 0 0.469 1.195 6.647 12.727 4.545 6.000 LGA V 8 V 8 1.997 0 0.076 0.085 3.661 45.000 35.325 3.661 LGA G 9 G 9 1.908 0 0.067 0.067 3.913 34.545 34.545 - LGA S 10 S 10 6.591 0 0.095 0.667 8.264 0.455 0.303 8.222 LGA S 11 S 11 7.405 0 0.019 0.656 9.081 0.000 0.000 8.932 LGA Y 12 Y 12 6.340 0 0.040 1.128 7.792 0.000 0.758 7.438 LGA V 13 V 13 7.382 0 0.029 0.073 10.424 0.000 0.000 8.923 LGA A 14 A 14 11.845 0 0.019 0.021 14.038 0.000 0.000 - LGA E 15 E 15 12.727 0 0.058 0.130 16.581 0.000 0.000 16.581 LGA T 16 T 16 11.230 0 0.130 0.157 11.920 0.000 0.000 7.622 LGA G 17 G 17 10.519 0 0.052 0.052 10.519 0.000 0.000 - LGA Q 18 Q 18 5.166 0 0.063 0.269 7.845 2.727 2.424 4.057 LGA N 19 N 19 4.022 0 0.622 1.353 10.125 13.182 6.591 10.125 LGA W 20 W 20 5.947 0 0.598 1.239 16.596 1.364 0.390 16.509 LGA A 21 A 21 3.679 0 0.043 0.042 4.520 19.545 19.273 - LGA S 22 S 22 2.487 0 0.024 0.626 3.263 32.727 31.212 2.324 LGA L 23 L 23 3.574 0 0.080 1.425 9.308 23.636 12.045 6.656 LGA A 24 A 24 3.206 0 0.005 0.015 4.020 28.182 23.636 - LGA A 25 A 25 1.294 0 0.035 0.035 1.863 62.273 66.182 - LGA N 26 N 26 1.152 0 0.008 0.087 3.421 74.545 52.727 2.622 LGA E 27 E 27 1.132 0 0.049 0.133 2.577 56.364 53.333 1.974 LGA L 28 L 28 2.946 0 0.045 0.054 4.363 23.636 16.818 4.046 LGA R 29 R 29 3.040 0 0.101 1.561 10.363 20.455 8.926 10.363 LGA V 30 V 30 2.544 0 0.053 0.066 2.866 35.909 35.325 2.017 LGA T 31 T 31 2.985 0 0.033 0.042 4.723 30.000 18.442 4.589 LGA E 32 E 32 1.525 0 0.596 0.881 4.844 49.545 26.667 4.844 LGA R 33 R 33 3.843 0 0.300 0.324 12.446 12.273 4.463 12.446 LGA P 34 P 34 5.709 0 0.660 0.621 7.090 0.000 0.000 6.820 LGA F 35 F 35 3.386 0 0.668 1.255 5.287 22.727 11.901 5.191 LGA W 36 W 36 2.011 0 0.276 0.880 8.948 41.364 18.571 8.609 LGA I 37 I 37 1.549 0 0.015 0.362 2.415 54.545 56.818 2.415 LGA S 38 S 38 1.119 0 0.036 0.080 1.583 61.818 65.758 0.883 LGA S 39 S 39 1.642 0 0.124 0.696 3.366 51.364 45.758 3.366 LGA F 40 F 40 0.384 0 0.468 0.631 4.044 68.636 45.289 3.800 LGA I 41 I 41 1.858 0 0.080 0.137 2.675 45.455 48.864 1.436 LGA G 42 G 42 2.971 0 0.142 0.142 2.971 35.909 35.909 - LGA R 43 R 43 0.672 0 0.119 1.081 7.177 59.091 44.298 7.177 LGA S 44 S 44 3.000 0 0.031 0.654 5.551 30.455 21.212 5.551 LGA K 45 K 45 7.630 0 0.384 0.716 15.681 0.000 0.000 15.681 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 5.167 5.165 6.297 23.936 19.332 11.273 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 28 2.65 54.545 50.332 1.017 LGA_LOCAL RMSD: 2.655 Number of atoms: 28 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 6.057 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 5.167 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.174100 * X + -0.984208 * Y + -0.032005 * Z + 6.611685 Y_new = -0.361154 * X + -0.094055 * Y + 0.927751 * Z + 44.458294 Z_new = -0.916110 * X + -0.149962 * Y + -0.371826 * Z + 4.706867 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.121600 1.158267 -2.758233 [DEG: -64.2629 66.3638 -158.0351 ] ZXZ: -3.107109 1.951771 -1.733052 [DEG: -178.0242 111.8283 -99.2966 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS043_5-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS043_5-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 28 2.65 50.332 5.17 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS043_5-D1 PFRMAT TS TARGET T0953s2 MODEL 5 PARENT N/A ATOM 20 N ALA 2 5.156 44.475 1.741 1.00 16.78 N ATOM 21 CA ALA 2 3.903 44.300 1.017 1.00 16.78 C ATOM 22 C ALA 2 4.036 43.236 -0.064 1.00 16.78 C ATOM 23 O ALA 2 3.045 42.814 -0.659 1.00 16.78 O ATOM 24 CB ALA 2 3.454 45.621 0.408 1.00 16.78 C ATOM 30 N VAL 3 5.269 42.806 -0.316 1.00 17.34 N ATOM 31 CA VAL 3 5.530 41.758 -1.295 1.00 17.34 C ATOM 32 C VAL 3 5.888 40.445 -0.612 1.00 17.34 C ATOM 33 O VAL 3 5.254 39.417 -0.849 1.00 17.34 O ATOM 34 CB VAL 3 6.677 42.176 -2.233 1.00 17.34 C ATOM 35 CG1 VAL 3 7.007 41.052 -3.205 1.00 17.34 C ATOM 36 CG2 VAL 3 6.297 43.444 -2.983 1.00 17.34 C ATOM 46 N GLN 4 6.911 40.484 0.236 1.00 16.09 N ATOM 47 CA GLN 4 7.389 39.286 0.916 1.00 16.09 C ATOM 48 C GLN 4 6.363 38.777 1.920 1.00 16.09 C ATOM 49 O GLN 4 6.207 37.569 2.104 1.00 16.09 O ATOM 50 CB GLN 4 8.717 39.566 1.624 1.00 16.09 C ATOM 51 CG GLN 4 9.370 38.337 2.231 1.00 16.09 C ATOM 52 CD GLN 4 9.767 37.314 1.183 1.00 16.09 C ATOM 53 OE1 GLN 4 10.443 37.639 0.203 1.00 16.09 O ATOM 54 NE2 GLN 4 9.349 36.069 1.383 1.00 16.09 N ATOM 63 N GLY 5 5.666 39.703 2.568 1.00 14.99 N ATOM 64 CA GLY 5 4.660 39.349 3.562 1.00 14.99 C ATOM 65 C GLY 5 3.661 38.345 3.003 1.00 14.99 C ATOM 66 O GLY 5 3.589 37.205 3.463 1.00 14.99 O ATOM 70 N PRO 6 2.892 38.773 2.008 1.00 14.75 N ATOM 71 CA PRO 6 1.897 37.911 1.383 1.00 14.75 C ATOM 72 C PRO 6 2.512 36.592 0.935 1.00 14.75 C ATOM 73 O PRO 6 1.878 35.540 1.017 1.00 14.75 O ATOM 74 CB PRO 6 1.418 38.746 0.190 1.00 14.75 C ATOM 75 CG PRO 6 1.575 40.157 0.645 1.00 14.75 C ATOM 76 CD PRO 6 2.850 40.153 1.445 1.00 14.75 C ATOM 84 N TRP 7 3.752 36.655 0.461 1.00 14.70 N ATOM 85 CA TRP 7 4.463 35.463 0.013 1.00 14.70 C ATOM 86 C TRP 7 4.649 34.472 1.154 1.00 14.70 C ATOM 87 O TRP 7 4.517 33.262 0.966 1.00 14.70 O ATOM 88 CB TRP 7 5.827 35.842 -0.567 1.00 14.70 C ATOM 89 CG TRP 7 5.749 36.428 -1.944 1.00 14.70 C ATOM 90 CD1 TRP 7 4.636 36.537 -2.723 1.00 14.70 C ATOM 91 CD2 TRP 7 6.836 36.992 -2.718 1.00 14.70 C ATOM 92 NE1 TRP 7 4.953 37.127 -3.921 1.00 14.70 N ATOM 93 CE2 TRP 7 6.294 37.414 -3.935 1.00 14.70 C ATOM 94 CE3 TRP 7 8.203 37.173 -2.477 1.00 14.70 C ATOM 95 CZ2 TRP 7 7.071 38.005 -4.919 1.00 14.70 C ATOM 96 CZ3 TRP 7 8.983 37.766 -3.463 1.00 14.70 C ATOM 97 CH2 TRP 7 8.431 38.172 -4.651 1.00 14.70 C ATOM 108 N VAL 8 4.957 34.990 2.337 1.00 12.61 N ATOM 109 CA VAL 8 5.087 34.159 3.528 1.00 12.61 C ATOM 110 C VAL 8 3.753 33.532 3.910 1.00 12.61 C ATOM 111 O VAL 8 3.681 32.342 4.216 1.00 12.61 O ATOM 112 CB VAL 8 5.615 34.995 4.709 1.00 12.61 C ATOM 113 CG1 VAL 8 5.529 34.202 6.004 1.00 12.61 C ATOM 114 CG2 VAL 8 7.046 35.431 4.437 1.00 12.61 C ATOM 124 N GLY 9 2.697 34.340 3.889 1.00 12.21 N ATOM 125 CA GLY 9 1.362 33.864 4.229 1.00 12.21 C ATOM 126 C GLY 9 0.908 32.769 3.274 1.00 12.21 C ATOM 127 O GLY 9 0.449 31.708 3.702 1.00 12.21 O ATOM 131 N SER 10 1.038 33.028 1.978 1.00 14.12 N ATOM 132 CA SER 10 0.650 32.060 0.959 1.00 14.12 C ATOM 133 C SER 10 1.452 30.772 1.090 1.00 14.12 C ATOM 134 O SER 10 0.900 29.675 1.007 1.00 14.12 O ATOM 135 CB SER 10 0.847 32.651 -0.424 1.00 14.12 C ATOM 136 OG SER 10 0.492 31.729 -1.418 1.00 14.12 O ATOM 142 N SER 11 2.757 30.911 1.294 1.00 14.89 N ATOM 143 CA SER 11 3.638 29.759 1.432 1.00 14.89 C ATOM 144 C SER 11 3.246 28.905 2.632 1.00 14.89 C ATOM 145 O SER 11 3.261 27.677 2.563 1.00 14.89 O ATOM 146 CB SER 11 5.077 30.215 1.574 1.00 14.89 C ATOM 147 OG SER 11 5.522 30.846 0.404 1.00 14.89 O ATOM 153 N TYR 12 2.895 29.565 3.731 1.00 12.79 N ATOM 154 CA TYR 12 2.515 28.869 4.954 1.00 12.79 C ATOM 155 C TYR 12 1.207 28.110 4.773 1.00 12.79 C ATOM 156 O TYR 12 1.052 26.994 5.270 1.00 12.79 O ATOM 157 CB TYR 12 2.399 29.856 6.117 1.00 12.79 C ATOM 158 CG TYR 12 2.344 29.193 7.476 1.00 12.79 C ATOM 159 CD1 TYR 12 3.430 28.463 7.937 1.00 12.79 C ATOM 160 CD2 TYR 12 1.208 29.318 8.263 1.00 12.79 C ATOM 161 CE1 TYR 12 3.379 27.858 9.177 1.00 12.79 C ATOM 162 CE2 TYR 12 1.157 28.713 9.503 1.00 12.79 C ATOM 163 CZ TYR 12 2.237 27.986 9.961 1.00 12.79 C ATOM 164 OH TYR 12 2.187 27.383 11.197 1.00 12.79 O ATOM 174 N VAL 13 0.269 28.721 4.058 1.00 12.58 N ATOM 175 CA VAL 13 -0.973 28.050 3.691 1.00 12.58 C ATOM 176 C VAL 13 -0.706 26.847 2.797 1.00 12.58 C ATOM 177 O VAL 13 -1.299 25.784 2.977 1.00 12.58 O ATOM 178 CB VAL 13 -1.913 29.029 2.963 1.00 12.58 C ATOM 179 CG1 VAL 13 -3.097 28.284 2.364 1.00 12.58 C ATOM 180 CG2 VAL 13 -2.386 30.108 3.926 1.00 12.58 C ATOM 190 N ALA 14 0.191 27.020 1.833 1.00 14.64 N ATOM 191 CA ALA 14 0.569 25.937 0.933 1.00 14.64 C ATOM 192 C ALA 14 1.246 24.801 1.692 1.00 14.64 C ATOM 193 O ALA 14 1.033 23.627 1.392 1.00 14.64 O ATOM 194 CB ALA 14 1.482 26.455 -0.168 1.00 14.64 C ATOM 200 N GLU 15 2.063 25.160 2.676 1.00 15.02 N ATOM 201 CA GLU 15 2.842 24.178 3.421 1.00 15.02 C ATOM 202 C GLU 15 1.984 23.468 4.459 1.00 15.02 C ATOM 203 O GLU 15 2.003 22.241 4.560 1.00 15.02 O ATOM 204 CB GLU 15 4.034 24.850 4.105 1.00 15.02 C ATOM 205 CG GLU 15 4.916 23.903 4.907 1.00 15.02 C ATOM 206 CD GLU 15 5.613 22.885 4.048 1.00 15.02 C ATOM 207 OE1 GLU 15 5.761 23.126 2.874 1.00 15.02 O ATOM 208 OE2 GLU 15 5.997 21.863 4.567 1.00 15.02 O ATOM 215 N THR 16 1.232 24.246 5.231 1.00 14.26 N ATOM 216 CA THR 16 0.501 23.713 6.375 1.00 14.26 C ATOM 217 C THR 16 -1.003 23.762 6.139 1.00 14.26 C ATOM 218 O THR 16 -1.727 22.833 6.496 1.00 14.26 O ATOM 219 CB THR 16 0.848 24.485 7.662 1.00 14.26 C ATOM 220 OG1 THR 16 0.434 25.851 7.529 1.00 14.26 O ATOM 221 CG2 THR 16 2.345 24.435 7.927 1.00 14.26 C ATOM 229 N GLY 17 -1.467 24.851 5.534 1.00 14.84 N ATOM 230 CA GLY 17 -2.894 25.065 5.330 1.00 14.84 C ATOM 231 C GLY 17 -3.434 26.129 6.278 1.00 14.84 C ATOM 232 O GLY 17 -4.605 26.500 6.208 1.00 14.84 O ATOM 236 N GLN 18 -2.571 26.618 7.163 1.00 13.32 N ATOM 237 CA GLN 18 -2.960 27.637 8.129 1.00 13.32 C ATOM 238 C GLN 18 -2.550 29.027 7.660 1.00 13.32 C ATOM 239 O GLN 18 -1.604 29.177 6.887 1.00 13.32 O ATOM 240 CB GLN 18 -2.339 27.344 9.497 1.00 13.32 C ATOM 241 CG GLN 18 -2.758 26.013 10.099 1.00 13.32 C ATOM 242 CD GLN 18 -4.243 25.955 10.401 1.00 13.32 C ATOM 243 OE1 GLN 18 -4.780 26.812 11.109 1.00 13.32 O ATOM 244 NE2 GLN 18 -4.917 24.944 9.866 1.00 13.32 N ATOM 253 N ASN 19 -3.269 30.040 8.130 1.00 12.03 N ATOM 254 CA ASN 19 -2.955 31.424 7.793 1.00 12.03 C ATOM 255 C ASN 19 -1.909 31.998 8.740 1.00 12.03 C ATOM 256 O ASN 19 -2.157 32.150 9.936 1.00 12.03 O ATOM 257 CB ASN 19 -4.211 32.275 7.805 1.00 12.03 C ATOM 258 CG ASN 19 -3.952 33.693 7.380 1.00 12.03 C ATOM 259 OD1 ASN 19 -3.111 34.387 7.965 1.00 12.03 O ATOM 260 ND2 ASN 19 -4.658 34.139 6.372 1.00 12.03 N ATOM 267 N TRP 20 -0.738 32.316 8.198 1.00 10.07 N ATOM 268 CA TRP 20 0.382 32.775 9.010 1.00 10.07 C ATOM 269 C TRP 20 -0.004 33.988 9.846 1.00 10.07 C ATOM 270 O TRP 20 0.276 34.043 11.044 1.00 10.07 O ATOM 271 CB TRP 20 1.578 33.122 8.121 1.00 10.07 C ATOM 272 CG TRP 20 2.741 33.689 8.877 1.00 10.07 C ATOM 273 CD1 TRP 20 3.127 34.995 8.921 1.00 10.07 C ATOM 274 CD2 TRP 20 3.681 32.966 9.708 1.00 10.07 C ATOM 275 NE1 TRP 20 4.237 35.135 9.716 1.00 10.07 N ATOM 276 CE2 TRP 20 4.590 33.903 10.207 1.00 10.07 C ATOM 277 CE3 TRP 20 3.822 31.618 10.063 1.00 10.07 C ATOM 278 CZ2 TRP 20 5.632 33.541 11.045 1.00 10.07 C ATOM 279 CZ3 TRP 20 4.868 31.255 10.905 1.00 10.07 C ATOM 280 CH2 TRP 20 5.748 32.192 11.383 1.00 10.07 C ATOM 291 N ALA 21 -0.646 34.960 9.207 1.00 9.51 N ATOM 292 CA ALA 21 -1.034 36.194 9.879 1.00 9.51 C ATOM 293 C ALA 21 -1.960 35.912 11.056 1.00 9.51 C ATOM 294 O ALA 21 -1.824 36.510 12.123 1.00 9.51 O ATOM 295 CB ALA 21 -1.700 37.146 8.898 1.00 9.51 C ATOM 301 N SER 22 -2.903 34.998 10.854 1.00 10.35 N ATOM 302 CA SER 22 -3.819 34.595 11.915 1.00 10.35 C ATOM 303 C SER 22 -3.071 33.942 13.070 1.00 10.35 C ATOM 304 O SER 22 -3.319 34.250 14.236 1.00 10.35 O ATOM 305 CB SER 22 -4.860 33.636 11.369 1.00 10.35 C ATOM 306 OG SER 22 -5.750 33.236 12.374 1.00 10.35 O ATOM 312 N LEU 23 -2.154 33.039 12.740 1.00 9.59 N ATOM 313 CA LEU 23 -1.338 32.372 13.747 1.00 9.59 C ATOM 314 C LEU 23 -0.524 33.378 14.550 1.00 9.59 C ATOM 315 O LEU 23 -0.531 33.356 15.781 1.00 9.59 O ATOM 316 CB LEU 23 -0.398 31.359 13.082 1.00 9.59 C ATOM 317 CG LEU 23 0.607 30.671 14.016 1.00 9.59 C ATOM 318 CD1 LEU 23 -0.145 29.868 15.068 1.00 9.59 C ATOM 319 CD2 LEU 23 1.528 29.776 13.199 1.00 9.59 C ATOM 331 N ALA 24 0.178 34.260 13.847 1.00 7.71 N ATOM 332 CA ALA 24 0.991 35.283 14.493 1.00 7.71 C ATOM 333 C ALA 24 0.138 36.201 15.358 1.00 7.71 C ATOM 334 O ALA 24 0.543 36.595 16.451 1.00 7.71 O ATOM 335 CB ALA 24 1.750 36.093 13.451 1.00 7.71 C ATOM 341 N ALA 25 -1.048 36.539 14.861 1.00 8.15 N ATOM 342 CA ALA 25 -1.986 37.363 15.614 1.00 8.15 C ATOM 343 C ALA 25 -2.421 36.670 16.899 1.00 8.15 C ATOM 344 O ALA 25 -2.552 37.306 17.945 1.00 8.15 O ATOM 345 CB ALA 25 -3.199 37.700 14.759 1.00 8.15 C ATOM 351 N ASN 26 -2.644 35.363 16.814 1.00 8.85 N ATOM 352 CA ASN 26 -3.040 34.576 17.976 1.00 8.85 C ATOM 353 C ASN 26 -1.925 34.523 19.012 1.00 8.85 C ATOM 354 O ASN 26 -2.180 34.565 20.215 1.00 8.85 O ATOM 355 CB ASN 26 -3.446 33.175 17.558 1.00 8.85 C ATOM 356 CG ASN 26 -4.783 33.141 16.870 1.00 8.85 C ATOM 357 OD1 ASN 26 -5.602 34.051 17.035 1.00 8.85 O ATOM 358 ND2 ASN 26 -5.017 32.110 16.099 1.00 8.85 N ATOM 365 N GLU 27 -0.687 34.433 18.538 1.00 7.80 N ATOM 366 CA GLU 27 0.470 34.369 19.423 1.00 7.80 C ATOM 367 C GLU 27 0.776 35.732 20.030 1.00 7.80 C ATOM 368 O GLU 27 1.196 35.829 21.183 1.00 7.80 O ATOM 369 CB GLU 27 1.695 33.851 18.664 1.00 7.80 C ATOM 370 CG GLU 27 1.600 32.393 18.238 1.00 7.80 C ATOM 371 CD GLU 27 1.526 31.447 19.404 1.00 7.80 C ATOM 372 OE1 GLU 27 2.286 31.613 20.328 1.00 7.80 O ATOM 373 OE2 GLU 27 0.710 30.558 19.371 1.00 7.80 O ATOM 380 N LEU 28 0.563 36.784 19.247 1.00 6.87 N ATOM 381 CA LEU 28 0.875 38.140 19.683 1.00 6.87 C ATOM 382 C LEU 28 -0.343 38.814 20.301 1.00 6.87 C ATOM 383 O LEU 28 -0.265 39.951 20.766 1.00 6.87 O ATOM 384 CB LEU 28 1.384 38.973 18.501 1.00 6.87 C ATOM 385 CG LEU 28 2.679 38.475 17.844 1.00 6.87 C ATOM 386 CD1 LEU 28 2.976 39.312 16.607 1.00 6.87 C ATOM 387 CD2 LEU 28 3.820 38.556 18.847 1.00 6.87 C ATOM 399 N ARG 29 -1.467 38.106 20.302 1.00 8.31 N ATOM 400 CA ARG 29 -2.705 38.635 20.864 1.00 8.31 C ATOM 401 C ARG 29 -3.154 39.889 20.124 1.00 8.31 C ATOM 402 O ARG 29 -3.450 40.912 20.741 1.00 8.31 O ATOM 403 CB ARG 29 -2.527 38.957 22.341 1.00 8.31 C ATOM 404 CG ARG 29 -2.151 37.771 23.213 1.00 8.31 C ATOM 405 CD ARG 29 -2.068 38.148 24.648 1.00 8.31 C ATOM 406 NE ARG 29 -1.699 37.018 25.485 1.00 8.31 N ATOM 407 CZ ARG 29 -1.494 37.086 26.815 1.00 8.31 C ATOM 408 NH1 ARG 29 -1.628 38.234 27.443 1.00 8.31 N ATOM 409 NH2 ARG 29 -1.161 35.999 27.489 1.00 8.31 N ATOM 423 N VAL 30 -3.203 39.803 18.800 1.00 11.75 N ATOM 424 CA VAL 30 -3.678 40.909 17.977 1.00 11.75 C ATOM 425 C VAL 30 -5.075 40.631 17.434 1.00 11.75 C ATOM 426 O VAL 30 -5.273 39.706 16.647 1.00 11.75 O ATOM 427 CB VAL 30 -2.712 41.153 16.802 1.00 11.75 C ATOM 428 CG1 VAL 30 -3.214 42.295 15.930 1.00 11.75 C ATOM 429 CG2 VAL 30 -1.318 41.450 17.331 1.00 11.75 C ATOM 439 N THR 31 -6.040 41.439 17.860 1.00 14.39 N ATOM 440 CA THR 31 -7.419 41.285 17.413 1.00 14.39 C ATOM 441 C THR 31 -7.858 42.471 16.564 1.00 14.39 C ATOM 442 O THR 31 -8.881 42.412 15.881 1.00 14.39 O ATOM 443 CB THR 31 -8.374 41.124 18.610 1.00 14.39 C ATOM 444 OG1 THR 31 -8.322 42.300 19.428 1.00 14.39 O ATOM 445 CG2 THR 31 -7.985 39.913 19.444 1.00 14.39 C ATOM 453 N GLU 32 -7.080 43.547 16.611 1.00 17.01 N ATOM 454 CA GLU 32 -7.400 44.757 15.864 1.00 17.01 C ATOM 455 C GLU 32 -7.033 44.610 14.392 1.00 17.01 C ATOM 456 O GLU 32 -7.838 44.907 13.510 1.00 17.01 O ATOM 457 CB GLU 32 -6.670 45.962 16.463 1.00 17.01 C ATOM 458 CG GLU 32 -7.142 46.353 17.856 1.00 17.01 C ATOM 459 CD GLU 32 -6.238 47.355 18.519 1.00 17.01 C ATOM 460 OE1 GLU 32 -5.382 47.886 17.854 1.00 17.01 O ATOM 461 OE2 GLU 32 -6.406 47.591 19.692 1.00 17.01 O ATOM 468 N ARG 33 -5.814 44.148 14.136 1.00 18.13 N ATOM 469 CA ARG 33 -5.313 44.025 12.772 1.00 18.13 C ATOM 470 C ARG 33 -4.618 42.686 12.558 1.00 18.13 C ATOM 471 O ARG 33 -3.401 42.628 12.387 1.00 18.13 O ATOM 472 CB ARG 33 -4.342 45.153 12.454 1.00 18.13 C ATOM 473 CG ARG 33 -4.933 46.551 12.549 1.00 18.13 C ATOM 474 CD ARG 33 -5.938 46.796 11.482 1.00 18.13 C ATOM 475 NE ARG 33 -6.478 48.144 11.545 1.00 18.13 N ATOM 476 CZ ARG 33 -7.603 48.488 12.201 1.00 18.13 C ATOM 477 NH1 ARG 33 -8.294 47.574 12.844 1.00 18.13 N ATOM 478 NH2 ARG 33 -8.012 49.745 12.199 1.00 18.13 N ATOM 492 N PRO 34 -5.400 41.612 12.570 1.00 17.13 N ATOM 493 CA PRO 34 -4.849 40.263 12.511 1.00 17.13 C ATOM 494 C PRO 34 -4.629 39.821 11.071 1.00 17.13 C ATOM 495 O PRO 34 -4.226 38.685 10.814 1.00 17.13 O ATOM 496 CB PRO 34 -5.925 39.420 13.204 1.00 17.13 C ATOM 497 CG PRO 34 -7.206 40.086 12.832 1.00 17.13 C ATOM 498 CD PRO 34 -6.881 41.557 12.848 1.00 17.13 C ATOM 506 N PHE 35 -4.894 40.723 10.133 1.00 16.48 N ATOM 507 CA PHE 35 -4.867 40.385 8.715 1.00 16.48 C ATOM 508 C PHE 35 -3.631 40.960 8.035 1.00 16.48 C ATOM 509 O PHE 35 -3.410 40.747 6.844 1.00 16.48 O ATOM 510 CB PHE 35 -6.126 40.903 8.017 1.00 16.48 C ATOM 511 CG PHE 35 -7.404 40.366 8.597 1.00 16.48 C ATOM 512 CD1 PHE 35 -8.261 41.193 9.308 1.00 16.48 C ATOM 513 CD2 PHE 35 -7.752 39.034 8.433 1.00 16.48 C ATOM 514 CE1 PHE 35 -9.436 40.700 9.842 1.00 16.48 C ATOM 515 CE2 PHE 35 -8.926 38.539 8.964 1.00 16.48 C ATOM 516 CZ PHE 35 -9.770 39.374 9.669 1.00 16.48 C ATOM 526 N TRP 36 -2.828 41.691 8.800 1.00 15.00 N ATOM 527 CA TRP 36 -1.653 42.362 8.257 1.00 15.00 C ATOM 528 C TRP 36 -0.499 41.386 8.067 1.00 15.00 C ATOM 529 O TRP 36 0.455 41.380 8.845 1.00 15.00 O ATOM 530 CB TRP 36 -1.216 43.502 9.178 1.00 15.00 C ATOM 531 CG TRP 36 -2.094 44.714 9.092 1.00 15.00 C ATOM 532 CD1 TRP 36 -3.302 44.801 8.467 1.00 15.00 C ATOM 533 CD2 TRP 36 -1.836 46.024 9.652 1.00 15.00 C ATOM 534 NE1 TRP 36 -3.812 46.069 8.598 1.00 15.00 N ATOM 535 CE2 TRP 36 -2.929 46.830 9.321 1.00 15.00 C ATOM 536 CE3 TRP 36 -0.784 46.568 10.397 1.00 15.00 C ATOM 537 CZ2 TRP 36 -3.003 48.159 9.707 1.00 15.00 C ATOM 538 CZ3 TRP 36 -0.859 47.901 10.785 1.00 15.00 C ATOM 539 CH2 TRP 36 -1.940 48.675 10.449 1.00 15.00 C ATOM 550 N ILE 37 -0.593 40.561 7.030 1.00 13.29 N ATOM 551 CA ILE 37 0.467 39.614 6.708 1.00 13.29 C ATOM 552 C ILE 37 1.786 40.329 6.447 1.00 13.29 C ATOM 553 O ILE 37 2.861 39.764 6.650 1.00 13.29 O ATOM 554 CB ILE 37 0.090 38.766 5.478 1.00 13.29 C ATOM 555 CG1 ILE 37 1.062 37.594 5.319 1.00 13.29 C ATOM 556 CG2 ILE 37 0.079 39.626 4.223 1.00 13.29 C ATOM 557 CD1 ILE 37 0.981 36.578 6.435 1.00 13.29 C ATOM 569 N SER 38 1.698 41.576 5.995 1.00 12.76 N ATOM 570 CA SER 38 2.884 42.354 5.660 1.00 12.76 C ATOM 571 C SER 38 3.590 42.853 6.914 1.00 12.76 C ATOM 572 O SER 38 4.737 43.297 6.857 1.00 12.76 O ATOM 573 CB SER 38 2.504 43.530 4.781 1.00 12.76 C ATOM 574 OG SER 38 1.724 44.454 5.488 1.00 12.76 O ATOM 580 N SER 39 2.898 42.776 8.046 1.00 10.16 N ATOM 581 CA SER 39 3.427 43.292 9.303 1.00 10.16 C ATOM 582 C SER 39 3.939 42.163 10.188 1.00 10.16 C ATOM 583 O SER 39 4.917 42.330 10.918 1.00 10.16 O ATOM 584 CB SER 39 2.356 44.076 10.036 1.00 10.16 C ATOM 585 OG SER 39 1.989 45.220 9.316 1.00 10.16 O ATOM 591 N PHE 40 3.274 41.016 10.120 1.00 7.56 N ATOM 592 CA PHE 40 3.646 39.866 10.936 1.00 7.56 C ATOM 593 C PHE 40 4.888 39.178 10.385 1.00 7.56 C ATOM 594 O PHE 40 4.819 38.051 9.893 1.00 7.56 O ATOM 595 CB PHE 40 2.490 38.864 11.005 1.00 7.56 C ATOM 596 CG PHE 40 1.308 39.355 11.790 1.00 7.56 C ATOM 597 CD1 PHE 40 0.088 39.577 11.167 1.00 7.56 C ATOM 598 CD2 PHE 40 1.412 39.600 13.151 1.00 7.56 C ATOM 599 CE1 PHE 40 -1.001 40.030 11.888 1.00 7.56 C ATOM 600 CE2 PHE 40 0.325 40.050 13.873 1.00 7.56 C ATOM 601 CZ PHE 40 -0.882 40.266 13.241 1.00 7.56 C ATOM 611 N ILE 41 6.024 39.862 10.471 1.00 8.15 N ATOM 612 CA ILE 41 7.288 39.313 9.993 1.00 8.15 C ATOM 613 C ILE 41 8.391 39.490 11.028 1.00 8.15 C ATOM 614 O ILE 41 8.860 40.603 11.266 1.00 8.15 O ATOM 615 CB ILE 41 7.711 39.979 8.672 1.00 8.15 C ATOM 616 CG1 ILE 41 6.627 39.789 7.607 1.00 8.15 C ATOM 617 CG2 ILE 41 9.038 39.412 8.192 1.00 8.15 C ATOM 618 CD1 ILE 41 6.882 40.560 6.332 1.00 8.15 C ATOM 630 N GLY 42 8.802 38.385 11.642 1.00 5.89 N ATOM 631 CA GLY 42 9.845 38.417 12.660 1.00 5.89 C ATOM 632 C GLY 42 9.307 38.942 13.985 1.00 5.89 C ATOM 633 O GLY 42 10.063 39.431 14.824 1.00 5.89 O ATOM 637 N ARG 43 7.995 38.836 14.167 1.00 4.46 N ATOM 638 CA ARG 43 7.347 39.334 15.374 1.00 4.46 C ATOM 639 C ARG 43 7.001 38.195 16.324 1.00 4.46 C ATOM 640 O ARG 43 6.306 37.250 15.950 1.00 4.46 O ATOM 641 CB ARG 43 6.079 40.099 15.024 1.00 4.46 C ATOM 642 CG ARG 43 6.306 41.407 14.280 1.00 4.46 C ATOM 643 CD ARG 43 5.039 42.156 14.086 1.00 4.46 C ATOM 644 NE ARG 43 5.242 43.381 13.329 1.00 4.46 N ATOM 645 CZ ARG 43 5.545 44.575 13.874 1.00 4.46 C ATOM 646 NH1 ARG 43 5.675 44.689 15.178 1.00 4.46 N ATOM 647 NH2 ARG 43 5.712 45.631 13.098 1.00 4.46 N ATOM 661 N SER 44 7.491 38.290 17.557 1.00 4.36 N ATOM 662 CA SER 44 8.341 39.404 17.959 1.00 4.36 C ATOM 663 C SER 44 9.127 39.069 19.220 1.00 4.36 C ATOM 664 O SER 44 8.667 38.300 20.064 1.00 4.36 O ATOM 665 CB SER 44 7.500 40.644 18.191 1.00 4.36 C ATOM 666 OG SER 44 8.295 41.717 18.617 1.00 4.36 O ATOM 672 N LYS 45 10.316 39.650 19.342 1.00 3.40 N ATOM 673 CA LYS 45 11.116 39.512 20.554 1.00 3.40 C ATOM 674 C LYS 45 10.866 40.669 21.513 1.00 3.40 C ATOM 675 O LYS 45 11.754 41.485 21.762 1.00 3.40 O ATOM 676 CB LYS 45 12.603 39.429 20.207 1.00 3.40 C ATOM 677 CG LYS 45 12.993 38.193 19.406 1.00 3.40 C ATOM 678 CD LYS 45 14.484 38.177 19.106 1.00 3.40 C ATOM 679 CE LYS 45 14.877 36.944 18.307 1.00 3.40 C ATOM 680 NZ LYS 45 16.330 36.926 17.987 1.00 3.40 N TER END