####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS043_4-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS043_4-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 21 25 - 45 4.93 16.41 LCS_AVERAGE: 45.82 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 9 - 20 1.49 15.13 LCS_AVERAGE: 23.35 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 20 - 29 0.34 11.80 LCS_AVERAGE: 15.70 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 6 12 4 4 5 5 8 11 13 15 18 20 23 26 26 27 30 33 33 34 36 37 LCS_GDT V 3 V 3 4 6 17 4 4 4 6 8 11 14 15 18 20 23 26 26 27 30 33 33 34 36 37 LCS_GDT Q 4 Q 4 4 6 19 4 4 4 6 6 7 8 8 13 16 20 24 25 27 28 31 33 34 36 37 LCS_GDT G 5 G 5 4 6 19 4 4 4 4 5 7 8 9 10 15 17 18 21 22 24 29 31 33 34 36 LCS_GDT P 6 P 6 4 6 19 2 3 4 4 5 7 8 9 10 12 13 14 16 16 24 24 24 26 30 30 LCS_GDT W 7 W 7 4 6 20 2 3 4 4 5 7 9 10 11 15 17 18 21 24 28 29 32 33 35 37 LCS_GDT V 8 V 8 4 5 20 0 3 4 4 6 8 11 15 17 21 23 26 26 27 30 33 33 34 36 37 LCS_GDT G 9 G 9 5 12 20 7 11 11 12 13 13 15 16 18 21 23 26 26 27 30 33 33 34 36 37 LCS_GDT S 10 S 10 5 12 20 4 5 6 8 11 12 15 16 18 21 23 26 26 27 30 33 33 34 36 37 LCS_GDT S 11 S 11 8 12 20 4 6 9 10 11 12 15 16 18 21 23 26 26 27 30 33 33 34 36 37 LCS_GDT Y 12 Y 12 8 12 20 4 7 9 10 11 12 15 16 18 21 23 26 26 27 30 33 33 34 36 37 LCS_GDT V 13 V 13 8 12 20 4 7 9 10 11 12 15 16 18 21 23 26 26 27 30 33 33 34 36 37 LCS_GDT A 14 A 14 8 12 20 3 7 8 10 11 12 15 16 18 21 22 24 26 27 30 33 33 34 36 37 LCS_GDT E 15 E 15 8 12 20 4 7 9 10 11 12 15 16 18 21 22 24 25 27 30 33 33 34 36 37 LCS_GDT T 16 T 16 8 12 20 4 7 9 10 11 12 15 16 18 21 22 24 25 27 30 33 33 34 36 37 LCS_GDT G 17 G 17 8 12 20 4 7 9 10 11 12 15 16 18 21 22 24 26 27 30 33 33 34 36 37 LCS_GDT Q 18 Q 18 8 12 20 4 7 9 10 11 12 15 16 18 21 23 26 26 27 30 33 33 34 36 37 LCS_GDT N 19 N 19 8 12 20 3 6 8 9 11 12 15 16 18 21 23 26 26 27 30 33 33 34 36 37 LCS_GDT W 20 W 20 10 12 20 10 11 12 12 13 13 15 16 18 21 23 26 26 27 30 33 33 34 36 37 LCS_GDT A 21 A 21 10 11 20 10 11 12 12 13 13 15 16 18 21 23 26 26 27 30 33 33 34 36 37 LCS_GDT S 22 S 22 10 11 20 10 11 12 12 13 13 14 15 18 21 23 26 26 27 30 33 33 34 36 37 LCS_GDT L 23 L 23 10 11 20 10 11 12 12 13 13 14 15 18 21 23 26 26 27 30 33 33 34 36 37 LCS_GDT A 24 A 24 10 11 20 10 11 12 12 13 13 14 15 18 20 23 26 26 27 30 33 33 34 36 37 LCS_GDT A 25 A 25 10 11 21 10 11 12 12 13 13 14 15 18 20 23 26 26 27 30 33 33 34 36 37 LCS_GDT N 26 N 26 10 11 21 10 11 12 12 13 13 14 15 18 20 23 26 26 27 30 33 33 34 36 37 LCS_GDT E 27 E 27 10 11 21 10 11 12 12 13 13 14 15 18 19 23 26 26 27 29 33 33 34 36 37 LCS_GDT L 28 L 28 10 11 21 10 11 12 12 13 13 14 15 18 19 22 26 26 27 28 30 32 34 36 37 LCS_GDT R 29 R 29 10 11 21 10 11 12 12 13 13 14 15 18 18 21 26 26 27 28 30 32 33 36 37 LCS_GDT V 30 V 30 4 6 21 3 4 4 6 7 10 11 15 18 20 23 26 26 27 30 33 33 34 36 37 LCS_GDT T 31 T 31 4 10 21 3 4 4 8 9 11 13 15 18 20 23 26 26 27 30 33 33 34 36 37 LCS_GDT E 32 E 32 4 10 21 3 4 4 6 7 8 10 11 14 18 22 24 26 27 30 33 33 34 36 37 LCS_GDT R 33 R 33 6 10 21 2 5 8 8 9 12 13 13 16 21 22 24 25 27 30 33 33 34 36 37 LCS_GDT P 34 P 34 7 11 21 3 5 8 8 9 12 13 13 18 21 22 24 24 27 28 29 32 33 34 36 LCS_GDT F 35 F 35 7 11 21 3 5 8 8 10 12 15 16 18 21 22 24 25 27 30 33 33 34 36 37 LCS_GDT W 36 W 36 7 11 21 5 5 8 9 10 12 15 16 18 21 22 24 25 27 30 33 33 34 36 37 LCS_GDT I 37 I 37 7 11 21 5 5 8 9 10 12 13 13 15 18 22 24 26 27 30 33 33 34 36 37 LCS_GDT S 38 S 38 7 11 21 5 5 8 9 10 12 13 16 18 21 22 24 26 27 30 33 33 34 36 37 LCS_GDT S 39 S 39 7 11 21 5 5 8 9 10 12 13 15 18 20 23 26 26 27 30 33 33 34 36 37 LCS_GDT F 40 F 40 7 11 21 5 5 12 12 13 13 14 15 18 20 23 26 26 27 30 33 33 34 36 37 LCS_GDT I 41 I 41 6 11 21 4 5 12 12 13 13 14 15 18 20 23 26 26 27 30 33 33 34 36 37 LCS_GDT G 42 G 42 6 11 21 4 5 8 9 10 12 14 15 18 18 21 26 26 27 28 32 33 34 35 36 LCS_GDT R 43 R 43 6 11 21 3 5 8 9 10 12 13 13 15 17 18 20 24 27 27 30 31 33 35 36 LCS_GDT S 44 S 44 6 11 21 0 3 6 9 10 12 13 13 15 17 17 18 18 19 21 22 23 25 27 30 LCS_GDT K 45 K 45 3 11 21 0 3 3 4 4 6 10 13 15 17 17 18 18 19 21 22 22 23 24 27 LCS_AVERAGE LCS_A: 28.29 ( 15.70 23.35 45.82 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 11 12 12 13 13 15 16 18 21 23 26 26 27 30 33 33 34 36 37 GDT PERCENT_AT 22.73 25.00 27.27 27.27 29.55 29.55 34.09 36.36 40.91 47.73 52.27 59.09 59.09 61.36 68.18 75.00 75.00 77.27 81.82 84.09 GDT RMS_LOCAL 0.34 0.42 0.96 0.96 1.23 1.23 2.57 2.71 2.98 3.42 3.84 4.18 4.18 4.57 5.18 5.52 5.52 5.68 6.04 6.20 GDT RMS_ALL_AT 11.80 11.72 11.44 11.44 11.18 11.18 11.46 11.13 10.87 10.49 8.94 9.28 9.28 8.61 8.74 8.65 8.65 8.65 8.58 8.59 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 11.280 0 0.040 0.055 13.800 0.000 0.000 - LGA V 3 V 3 9.449 0 0.062 0.121 9.492 0.000 0.000 8.003 LGA Q 4 Q 4 12.672 0 0.063 0.983 16.182 0.000 0.000 16.182 LGA G 5 G 5 15.906 0 0.250 0.250 16.498 0.000 0.000 - LGA P 6 P 6 16.229 0 0.607 0.540 20.302 0.000 0.000 20.302 LGA W 7 W 7 11.509 0 0.386 0.317 19.331 0.000 0.000 18.369 LGA V 8 V 8 4.831 0 0.644 0.898 7.093 16.818 12.208 3.311 LGA G 9 G 9 2.799 0 0.431 0.431 2.799 38.636 38.636 - LGA S 10 S 10 3.126 0 0.006 0.160 4.288 28.182 20.606 4.288 LGA S 11 S 11 1.752 0 0.509 0.446 3.881 50.909 38.788 3.881 LGA Y 12 Y 12 1.633 0 0.140 1.191 12.161 58.182 24.091 12.161 LGA V 13 V 13 1.298 0 0.027 0.036 3.219 62.273 47.532 3.219 LGA A 14 A 14 3.153 0 0.080 0.083 4.159 21.364 18.182 - LGA E 15 E 15 3.480 0 0.029 0.129 6.510 17.273 9.091 6.510 LGA T 16 T 16 2.582 0 0.038 0.073 3.383 35.455 34.026 1.992 LGA G 17 G 17 1.470 0 0.189 0.189 1.566 65.909 65.909 - LGA Q 18 Q 18 1.148 0 0.139 0.344 3.434 59.091 45.859 3.434 LGA N 19 N 19 3.357 0 0.296 1.034 7.692 20.909 12.045 3.645 LGA W 20 W 20 3.349 0 0.635 1.140 15.546 33.636 9.610 15.546 LGA A 21 A 21 3.036 0 0.027 0.028 5.838 15.455 12.727 - LGA S 22 S 22 5.831 0 0.054 0.103 7.490 1.364 1.818 4.216 LGA L 23 L 23 5.449 0 0.019 0.113 9.023 1.364 3.182 4.649 LGA A 24 A 24 7.851 0 0.003 0.014 11.326 0.000 0.000 - LGA A 25 A 25 11.186 0 0.009 0.014 14.753 0.000 0.000 - LGA N 26 N 26 13.647 0 0.000 0.094 16.773 0.000 0.000 13.263 LGA E 27 E 27 15.318 0 0.101 1.311 18.716 0.000 0.000 15.964 LGA L 28 L 28 17.293 0 0.250 1.400 19.780 0.000 0.000 16.036 LGA R 29 R 29 20.517 0 0.360 1.553 26.570 0.000 0.000 26.570 LGA V 30 V 30 16.204 0 0.182 0.188 17.230 0.000 0.000 13.501 LGA T 31 T 31 16.567 0 0.035 0.054 20.341 0.000 0.000 20.315 LGA E 32 E 32 14.124 0 0.660 1.033 18.376 0.000 0.000 18.376 LGA R 33 R 33 7.624 0 0.101 0.203 16.581 0.000 0.000 16.581 LGA P 34 P 34 4.912 0 0.121 0.136 5.293 8.182 6.234 5.293 LGA F 35 F 35 3.423 0 0.057 0.221 10.140 14.091 5.124 10.040 LGA W 36 W 36 1.527 0 0.157 0.148 10.498 32.727 12.857 10.498 LGA I 37 I 37 6.506 0 0.039 1.395 12.836 0.455 0.227 12.836 LGA S 38 S 38 3.778 0 0.068 0.099 5.734 4.545 25.152 0.980 LGA S 39 S 39 7.327 0 0.058 0.090 10.987 0.000 0.000 7.916 LGA F 40 F 40 11.711 0 0.053 1.161 14.776 0.000 0.000 14.309 LGA I 41 I 41 12.293 0 0.046 0.097 12.791 0.000 0.000 10.401 LGA G 42 G 42 15.341 0 0.035 0.035 17.485 0.000 0.000 - LGA R 43 R 43 17.597 0 0.652 1.368 19.286 0.000 0.000 14.894 LGA S 44 S 44 23.419 0 0.503 0.481 25.477 0.000 0.000 24.513 LGA K 45 K 45 24.477 0 0.018 0.753 27.242 0.000 0.000 19.065 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 8.509 8.493 9.914 13.337 10.089 6.338 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 16 2.71 40.909 35.841 0.570 LGA_LOCAL RMSD: 2.707 Number of atoms: 16 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 11.133 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 8.509 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.102515 * X + -0.166772 * Y + 0.980652 * Z + 3.383970 Y_new = -0.365422 * X + -0.923229 * Y + -0.118806 * Z + 48.625912 Z_new = 0.925180 * X + -0.346172 * Y + -0.155586 * Z + 6.937941 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.297289 -1.181509 -1.993191 [DEG: -74.3292 -67.6955 -114.2015 ] ZXZ: 1.450234 1.727017 1.928837 [DEG: 83.0923 98.9508 110.5142 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS043_4-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS043_4-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 16 2.71 35.841 8.51 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS043_4-D1 PFRMAT TS TARGET T0953s2 MODEL 4 PARENT N/A ATOM 20 N ALA 2 4.024 45.921 9.242 1.00 16.78 N ATOM 21 CA ALA 2 3.946 44.470 9.364 1.00 16.78 C ATOM 22 C ALA 2 2.621 44.040 9.980 1.00 16.78 C ATOM 23 O ALA 2 2.060 44.742 10.823 1.00 16.78 O ATOM 24 CB ALA 2 5.109 43.943 10.191 1.00 16.78 C ATOM 30 N VAL 3 2.124 42.883 9.555 1.00 17.34 N ATOM 31 CA VAL 3 0.860 42.361 10.060 1.00 17.34 C ATOM 32 C VAL 3 0.982 41.931 11.516 1.00 17.34 C ATOM 33 O VAL 3 1.786 41.060 11.850 1.00 17.34 O ATOM 34 CB VAL 3 0.400 41.162 9.209 1.00 17.34 C ATOM 35 CG1 VAL 3 -0.876 40.562 9.782 1.00 17.34 C ATOM 36 CG2 VAL 3 0.190 41.599 7.768 1.00 17.34 C ATOM 46 N GLN 4 0.181 42.545 12.379 1.00 16.09 N ATOM 47 CA GLN 4 0.201 42.229 13.802 1.00 16.09 C ATOM 48 C GLN 4 -0.867 41.202 14.154 1.00 16.09 C ATOM 49 O GLN 4 -1.803 40.978 13.386 1.00 16.09 O ATOM 50 CB GLN 4 0.002 43.498 14.636 1.00 16.09 C ATOM 51 CG GLN 4 1.033 44.582 14.376 1.00 16.09 C ATOM 52 CD GLN 4 2.446 44.124 14.688 1.00 16.09 C ATOM 53 OE1 GLN 4 2.745 43.710 15.811 1.00 16.09 O ATOM 54 NE2 GLN 4 3.324 44.197 13.693 1.00 16.09 N ATOM 63 N GLY 5 -0.722 40.581 15.320 1.00 14.99 N ATOM 64 CA GLY 5 -1.566 39.453 15.697 1.00 14.99 C ATOM 65 C GLY 5 -1.177 38.194 14.933 1.00 14.99 C ATOM 66 O GLY 5 -0.017 37.780 14.949 1.00 14.99 O ATOM 70 N PRO 6 -2.152 37.589 14.264 1.00 14.75 N ATOM 71 CA PRO 6 -1.890 36.449 13.393 1.00 14.75 C ATOM 72 C PRO 6 -0.821 36.780 12.359 1.00 14.75 C ATOM 73 O PRO 6 -1.022 37.635 11.498 1.00 14.75 O ATOM 74 CB PRO 6 -3.252 36.198 12.738 1.00 14.75 C ATOM 75 CG PRO 6 -4.236 36.737 13.719 1.00 14.75 C ATOM 76 CD PRO 6 -3.573 37.970 14.273 1.00 14.75 C ATOM 84 N TRP 7 0.314 36.097 12.451 1.00 14.70 N ATOM 85 CA TRP 7 1.413 36.308 11.515 1.00 14.70 C ATOM 86 C TRP 7 1.327 35.345 10.339 1.00 14.70 C ATOM 87 O TRP 7 0.902 34.200 10.491 1.00 14.70 O ATOM 88 CB TRP 7 2.757 36.135 12.224 1.00 14.70 C ATOM 89 CG TRP 7 3.111 37.281 13.124 1.00 14.70 C ATOM 90 CD1 TRP 7 2.862 37.376 14.460 1.00 14.70 C ATOM 91 CD2 TRP 7 3.786 38.508 12.753 1.00 14.70 C ATOM 92 NE1 TRP 7 3.330 38.572 14.946 1.00 14.70 N ATOM 93 CE2 TRP 7 3.901 39.277 13.916 1.00 14.70 C ATOM 94 CE3 TRP 7 4.295 39.007 11.549 1.00 14.70 C ATOM 95 CZ2 TRP 7 4.503 40.525 13.913 1.00 14.70 C ATOM 96 CZ3 TRP 7 4.900 40.258 11.547 1.00 14.70 C ATOM 97 CH2 TRP 7 5.002 40.996 12.698 1.00 14.70 C ATOM 108 N VAL 8 1.735 35.816 9.165 1.00 12.61 N ATOM 109 CA VAL 8 1.734 34.988 7.965 1.00 12.61 C ATOM 110 C VAL 8 2.919 35.317 7.067 1.00 12.61 C ATOM 111 O VAL 8 3.242 36.485 6.853 1.00 12.61 O ATOM 112 CB VAL 8 0.426 35.189 7.178 1.00 12.61 C ATOM 113 CG1 VAL 8 0.290 36.636 6.731 1.00 12.61 C ATOM 114 CG2 VAL 8 0.391 34.249 5.982 1.00 12.61 C ATOM 124 N GLY 9 3.566 34.280 6.545 1.00 12.21 N ATOM 125 CA GLY 9 4.756 34.456 5.721 1.00 12.21 C ATOM 126 C GLY 9 5.492 33.135 5.529 1.00 12.21 C ATOM 127 O GLY 9 4.926 32.062 5.734 1.00 12.21 O ATOM 131 N SER 10 6.758 33.222 5.134 1.00 14.12 N ATOM 132 CA SER 10 7.551 32.035 4.840 1.00 14.12 C ATOM 133 C SER 10 7.952 31.310 6.117 1.00 14.12 C ATOM 134 O SER 10 8.200 30.104 6.108 1.00 14.12 O ATOM 135 CB SER 10 8.790 32.416 4.054 1.00 14.12 C ATOM 136 OG SER 10 9.665 33.183 4.835 1.00 14.12 O ATOM 142 N SER 11 8.016 32.052 7.218 1.00 14.89 N ATOM 143 CA SER 11 8.404 31.485 8.504 1.00 14.89 C ATOM 144 C SER 11 7.567 32.064 9.637 1.00 14.89 C ATOM 145 O SER 11 8.083 32.770 10.504 1.00 14.89 O ATOM 146 CB SER 11 9.875 31.743 8.766 1.00 14.89 C ATOM 147 OG SER 11 10.299 31.091 9.931 1.00 14.89 O ATOM 153 N TYR 12 6.273 31.763 9.624 1.00 12.79 N ATOM 154 CA TYR 12 5.380 32.173 10.702 1.00 12.79 C ATOM 155 C TYR 12 4.339 31.100 10.992 1.00 12.79 C ATOM 156 O TYR 12 4.257 30.587 12.109 1.00 12.79 O ATOM 157 CB TYR 12 4.695 33.496 10.353 1.00 12.79 C ATOM 158 CG TYR 12 5.619 34.694 10.406 1.00 12.79 C ATOM 159 CD1 TYR 12 6.002 35.326 9.233 1.00 12.79 C ATOM 160 CD2 TYR 12 6.081 35.160 11.628 1.00 12.79 C ATOM 161 CE1 TYR 12 6.845 36.419 9.281 1.00 12.79 C ATOM 162 CE2 TYR 12 6.924 36.252 11.677 1.00 12.79 C ATOM 163 CZ TYR 12 7.305 36.882 10.510 1.00 12.79 C ATOM 164 OH TYR 12 8.145 37.971 10.557 1.00 12.79 O ATOM 174 N VAL 13 3.544 30.763 9.981 1.00 12.58 N ATOM 175 CA VAL 13 2.455 29.810 10.148 1.00 12.58 C ATOM 176 C VAL 13 2.984 28.391 10.312 1.00 12.58 C ATOM 177 O VAL 13 2.620 27.687 11.255 1.00 12.58 O ATOM 178 CB VAL 13 1.508 29.863 8.934 1.00 12.58 C ATOM 179 CG1 VAL 13 0.447 28.778 9.038 1.00 12.58 C ATOM 180 CG2 VAL 13 0.864 31.238 8.840 1.00 12.58 C ATOM 190 N ALA 14 3.847 27.976 9.391 1.00 14.64 N ATOM 191 CA ALA 14 4.458 26.654 9.453 1.00 14.64 C ATOM 192 C ALA 14 5.520 26.589 10.544 1.00 14.64 C ATOM 193 O ALA 14 5.805 25.519 11.082 1.00 14.64 O ATOM 194 CB ALA 14 5.061 26.285 8.106 1.00 14.64 C ATOM 200 N GLU 15 6.102 27.738 10.865 1.00 15.02 N ATOM 201 CA GLU 15 7.149 27.810 11.877 1.00 15.02 C ATOM 202 C GLU 15 6.581 27.593 13.273 1.00 15.02 C ATOM 203 O GLU 15 7.176 26.893 14.094 1.00 15.02 O ATOM 204 CB GLU 15 7.863 29.163 11.811 1.00 15.02 C ATOM 205 CG GLU 15 9.022 29.309 12.787 1.00 15.02 C ATOM 206 CD GLU 15 10.152 28.360 12.500 1.00 15.02 C ATOM 207 OE1 GLU 15 10.259 27.915 11.382 1.00 15.02 O ATOM 208 OE2 GLU 15 10.908 28.079 13.400 1.00 15.02 O ATOM 215 N THR 16 5.427 28.195 13.538 1.00 14.26 N ATOM 216 CA THR 16 4.786 28.084 14.843 1.00 14.26 C ATOM 217 C THR 16 3.728 26.988 14.846 1.00 14.26 C ATOM 218 O THR 16 3.306 26.523 15.904 1.00 14.26 O ATOM 219 CB THR 16 4.146 29.421 15.262 1.00 14.26 C ATOM 220 OG1 THR 16 3.144 29.794 14.306 1.00 14.26 O ATOM 221 CG2 THR 16 5.200 30.515 15.340 1.00 14.26 C ATOM 229 N GLY 17 3.305 26.578 13.655 1.00 14.84 N ATOM 230 CA GLY 17 2.340 25.494 13.516 1.00 14.84 C ATOM 231 C GLY 17 0.939 25.952 13.901 1.00 14.84 C ATOM 232 O GLY 17 0.191 25.217 14.546 1.00 14.84 O ATOM 236 N GLN 18 0.589 27.169 13.501 1.00 13.32 N ATOM 237 CA GLN 18 -0.680 27.770 13.896 1.00 13.32 C ATOM 238 C GLN 18 -1.628 27.887 12.709 1.00 13.32 C ATOM 239 O GLN 18 -1.257 27.584 11.575 1.00 13.32 O ATOM 240 CB GLN 18 -0.449 29.150 14.518 1.00 13.32 C ATOM 241 CG GLN 18 0.447 29.137 15.744 1.00 13.32 C ATOM 242 CD GLN 18 -0.160 28.361 16.897 1.00 13.32 C ATOM 243 OE1 GLN 18 -1.265 28.663 17.354 1.00 13.32 O ATOM 244 NE2 GLN 18 0.561 27.352 17.374 1.00 13.32 N ATOM 253 N ASN 19 -2.853 28.326 12.977 1.00 12.03 N ATOM 254 CA ASN 19 -3.843 28.524 11.926 1.00 12.03 C ATOM 255 C ASN 19 -3.931 29.990 11.521 1.00 12.03 C ATOM 256 O ASN 19 -4.963 30.447 11.030 1.00 12.03 O ATOM 257 CB ASN 19 -5.201 28.009 12.367 1.00 12.03 C ATOM 258 CG ASN 19 -5.233 26.513 12.510 1.00 12.03 C ATOM 259 OD1 ASN 19 -4.671 25.786 11.681 1.00 12.03 O ATOM 260 ND2 ASN 19 -5.881 26.039 13.543 1.00 12.03 N ATOM 267 N TRP 20 -2.842 30.722 11.730 1.00 10.07 N ATOM 268 CA TRP 20 -2.815 32.152 11.446 1.00 10.07 C ATOM 269 C TRP 20 -3.120 32.428 9.979 1.00 10.07 C ATOM 270 O TRP 20 -3.673 33.473 9.636 1.00 10.07 O ATOM 271 CB TRP 20 -1.449 32.741 11.806 1.00 10.07 C ATOM 272 CG TRP 20 -1.195 32.804 13.281 1.00 10.07 C ATOM 273 CD1 TRP 20 -2.133 32.813 14.271 1.00 10.07 C ATOM 274 CD2 TRP 20 0.090 32.869 13.946 1.00 10.07 C ATOM 275 NE1 TRP 20 -1.523 32.879 15.499 1.00 10.07 N ATOM 276 CE2 TRP 20 -0.164 32.912 15.319 1.00 10.07 C ATOM 277 CE3 TRP 20 1.414 32.891 13.493 1.00 10.07 C ATOM 278 CZ2 TRP 20 0.859 32.979 16.252 1.00 10.07 C ATOM 279 CZ3 TRP 20 2.441 32.958 14.428 1.00 10.07 C ATOM 280 CH2 TRP 20 2.169 33.000 15.772 1.00 10.07 C ATOM 291 N ALA 21 -2.757 31.485 9.117 1.00 9.51 N ATOM 292 CA ALA 21 -3.008 31.617 7.687 1.00 9.51 C ATOM 293 C ALA 21 -4.496 31.777 7.400 1.00 9.51 C ATOM 294 O ALA 21 -4.890 32.545 6.524 1.00 9.51 O ATOM 295 CB ALA 21 -2.452 30.414 6.938 1.00 9.51 C ATOM 301 N SER 22 -5.318 31.046 8.146 1.00 10.35 N ATOM 302 CA SER 22 -6.763 31.079 7.950 1.00 10.35 C ATOM 303 C SER 22 -7.370 32.344 8.539 1.00 10.35 C ATOM 304 O SER 22 -8.376 32.852 8.043 1.00 10.35 O ATOM 305 CB SER 22 -7.403 29.857 8.581 1.00 10.35 C ATOM 306 OG SER 22 -7.292 29.898 9.977 1.00 10.35 O ATOM 312 N LEU 23 -6.755 32.850 9.603 1.00 9.59 N ATOM 313 CA LEU 23 -7.162 34.120 10.192 1.00 9.59 C ATOM 314 C LEU 23 -6.797 35.289 9.287 1.00 9.59 C ATOM 315 O LEU 23 -7.550 36.256 9.170 1.00 9.59 O ATOM 316 CB LEU 23 -6.503 34.303 11.565 1.00 9.59 C ATOM 317 CG LEU 23 -6.978 33.344 12.664 1.00 9.59 C ATOM 318 CD1 LEU 23 -6.127 33.540 13.912 1.00 9.59 C ATOM 319 CD2 LEU 23 -8.449 33.597 12.959 1.00 9.59 C ATOM 331 N ALA 24 -5.635 35.195 8.648 1.00 7.71 N ATOM 332 CA ALA 24 -5.208 36.202 7.684 1.00 7.71 C ATOM 333 C ALA 24 -6.105 36.202 6.452 1.00 7.71 C ATOM 334 O ALA 24 -6.444 37.258 5.919 1.00 7.71 O ATOM 335 CB ALA 24 -3.759 35.970 7.282 1.00 7.71 C ATOM 341 N ALA 25 -6.487 35.010 6.004 1.00 8.15 N ATOM 342 CA ALA 25 -7.395 34.871 4.873 1.00 8.15 C ATOM 343 C ALA 25 -8.741 35.522 5.164 1.00 8.15 C ATOM 344 O ALA 25 -9.280 36.255 4.334 1.00 8.15 O ATOM 345 CB ALA 25 -7.584 33.403 4.522 1.00 8.15 C ATOM 351 N ASN 26 -9.280 35.252 6.348 1.00 8.85 N ATOM 352 CA ASN 26 -10.539 35.853 6.772 1.00 8.85 C ATOM 353 C ASN 26 -10.403 37.361 6.937 1.00 8.85 C ATOM 354 O ASN 26 -11.303 38.117 6.571 1.00 8.85 O ATOM 355 CB ASN 26 -11.026 35.217 8.061 1.00 8.85 C ATOM 356 CG ASN 26 -11.578 33.834 7.852 1.00 8.85 C ATOM 357 OD1 ASN 26 -11.985 33.477 6.740 1.00 8.85 O ATOM 358 ND2 ASN 26 -11.600 33.048 8.898 1.00 8.85 N ATOM 365 N GLU 27 -9.274 37.791 7.487 1.00 7.80 N ATOM 366 CA GLU 27 -8.991 39.212 7.645 1.00 7.80 C ATOM 367 C GLU 27 -9.033 39.934 6.303 1.00 7.80 C ATOM 368 O GLU 27 -9.628 41.004 6.181 1.00 7.80 O ATOM 369 CB GLU 27 -7.624 39.416 8.301 1.00 7.80 C ATOM 370 CG GLU 27 -7.226 40.873 8.489 1.00 7.80 C ATOM 371 CD GLU 27 -5.902 41.034 9.183 1.00 7.80 C ATOM 372 OE1 GLU 27 -5.340 40.044 9.587 1.00 7.80 O ATOM 373 OE2 GLU 27 -5.452 42.148 9.309 1.00 7.80 O ATOM 380 N LEU 28 -8.396 39.340 5.298 1.00 6.87 N ATOM 381 CA LEU 28 -8.399 39.902 3.952 1.00 6.87 C ATOM 382 C LEU 28 -9.816 40.019 3.407 1.00 6.87 C ATOM 383 O LEU 28 -10.181 41.032 2.811 1.00 6.87 O ATOM 384 CB LEU 28 -7.553 39.031 3.014 1.00 6.87 C ATOM 385 CG LEU 28 -7.530 39.467 1.543 1.00 6.87 C ATOM 386 CD1 LEU 28 -7.036 40.904 1.448 1.00 6.87 C ATOM 387 CD2 LEU 28 -6.634 38.528 0.750 1.00 6.87 C ATOM 399 N ARG 29 -10.612 38.976 3.615 1.00 8.31 N ATOM 400 CA ARG 29 -11.996 38.963 3.152 1.00 8.31 C ATOM 401 C ARG 29 -12.791 40.108 3.767 1.00 8.31 C ATOM 402 O ARG 29 -13.594 40.752 3.092 1.00 8.31 O ATOM 403 CB ARG 29 -12.665 37.641 3.500 1.00 8.31 C ATOM 404 CG ARG 29 -12.189 36.451 2.682 1.00 8.31 C ATOM 405 CD ARG 29 -12.764 35.176 3.183 1.00 8.31 C ATOM 406 NE ARG 29 -12.355 34.041 2.371 1.00 8.31 N ATOM 407 CZ ARG 29 -12.448 32.752 2.756 1.00 8.31 C ATOM 408 NH1 ARG 29 -12.936 32.453 3.939 1.00 8.31 N ATOM 409 NH2 ARG 29 -12.049 31.791 1.942 1.00 8.31 N ATOM 423 N VAL 30 -12.563 40.357 5.053 1.00 11.75 N ATOM 424 CA VAL 30 -13.233 41.447 5.753 1.00 11.75 C ATOM 425 C VAL 30 -12.622 42.794 5.386 1.00 11.75 C ATOM 426 O VAL 30 -11.774 43.318 6.109 1.00 11.75 O ATOM 427 CB VAL 30 -13.139 41.241 7.277 1.00 11.75 C ATOM 428 CG1 VAL 30 -13.787 42.404 8.011 1.00 11.75 C ATOM 429 CG2 VAL 30 -13.797 39.926 7.662 1.00 11.75 C ATOM 439 N THR 31 -13.057 43.348 4.261 1.00 14.39 N ATOM 440 CA THR 31 -12.594 44.660 3.824 1.00 14.39 C ATOM 441 C THR 31 -13.535 45.761 4.294 1.00 14.39 C ATOM 442 O THR 31 -13.209 46.946 4.214 1.00 14.39 O ATOM 443 CB THR 31 -12.454 44.718 2.292 1.00 14.39 C ATOM 444 OG1 THR 31 -13.738 44.516 1.684 1.00 14.39 O ATOM 445 CG2 THR 31 -11.494 43.644 1.803 1.00 14.39 C ATOM 453 N GLU 32 -14.705 45.364 4.782 1.00 17.01 N ATOM 454 CA GLU 32 -15.677 46.313 5.311 1.00 17.01 C ATOM 455 C GLU 32 -15.207 46.903 6.634 1.00 17.01 C ATOM 456 O GLU 32 -15.785 47.867 7.137 1.00 17.01 O ATOM 457 CB GLU 32 -17.037 45.636 5.498 1.00 17.01 C ATOM 458 CG GLU 32 -17.029 44.466 6.472 1.00 17.01 C ATOM 459 CD GLU 32 -16.700 43.157 5.809 1.00 17.01 C ATOM 460 OE1 GLU 32 -16.127 43.178 4.746 1.00 17.01 O ATOM 461 OE2 GLU 32 -17.023 42.134 6.367 1.00 17.01 O ATOM 468 N ARG 33 -14.154 46.319 7.196 1.00 18.13 N ATOM 469 CA ARG 33 -13.540 46.848 8.408 1.00 18.13 C ATOM 470 C ARG 33 -12.034 47.004 8.241 1.00 18.13 C ATOM 471 O ARG 33 -11.413 46.298 7.446 1.00 18.13 O ATOM 472 CB ARG 33 -13.824 45.937 9.593 1.00 18.13 C ATOM 473 CG ARG 33 -15.293 45.810 9.965 1.00 18.13 C ATOM 474 CD ARG 33 -15.826 47.073 10.536 1.00 18.13 C ATOM 475 NE ARG 33 -17.215 46.939 10.946 1.00 18.13 N ATOM 476 CZ ARG 33 -18.275 47.151 10.141 1.00 18.13 C ATOM 477 NH1 ARG 33 -18.088 47.506 8.889 1.00 18.13 N ATOM 478 NH2 ARG 33 -19.502 47.002 10.609 1.00 18.13 N ATOM 492 N PRO 34 -11.453 47.930 8.994 1.00 17.13 N ATOM 493 CA PRO 34 -10.016 48.175 8.935 1.00 17.13 C ATOM 494 C PRO 34 -9.230 46.893 9.176 1.00 17.13 C ATOM 495 O PRO 34 -9.530 46.132 10.096 1.00 17.13 O ATOM 496 CB PRO 34 -9.794 49.193 10.059 1.00 17.13 C ATOM 497 CG PRO 34 -11.089 49.926 10.149 1.00 17.13 C ATOM 498 CD PRO 34 -12.135 48.868 9.918 1.00 17.13 C ATOM 506 N PHE 35 -8.220 46.659 8.344 1.00 16.48 N ATOM 507 CA PHE 35 -7.374 45.479 8.478 1.00 16.48 C ATOM 508 C PHE 35 -5.974 45.741 7.940 1.00 16.48 C ATOM 509 O PHE 35 -5.722 46.769 7.312 1.00 16.48 O ATOM 510 CB PHE 35 -7.995 44.290 7.742 1.00 16.48 C ATOM 511 CG PHE 35 -7.934 44.406 6.245 1.00 16.48 C ATOM 512 CD1 PHE 35 -6.957 43.736 5.523 1.00 16.48 C ATOM 513 CD2 PHE 35 -8.852 45.185 5.556 1.00 16.48 C ATOM 514 CE1 PHE 35 -6.900 43.841 4.147 1.00 16.48 C ATOM 515 CE2 PHE 35 -8.797 45.291 4.181 1.00 16.48 C ATOM 516 CZ PHE 35 -7.820 44.618 3.475 1.00 16.48 C ATOM 526 N TRP 36 -5.065 44.804 8.189 1.00 15.00 N ATOM 527 CA TRP 36 -3.683 44.942 7.747 1.00 15.00 C ATOM 528 C TRP 36 -3.553 44.671 6.254 1.00 15.00 C ATOM 529 O TRP 36 -3.510 43.518 5.824 1.00 15.00 O ATOM 530 CB TRP 36 -2.776 43.984 8.523 1.00 15.00 C ATOM 531 CG TRP 36 -2.640 44.333 9.974 1.00 15.00 C ATOM 532 CD1 TRP 36 -3.218 43.687 11.026 1.00 15.00 C ATOM 533 CD2 TRP 36 -1.873 45.421 10.545 1.00 15.00 C ATOM 534 NE1 TRP 36 -2.865 44.294 12.206 1.00 15.00 N ATOM 535 CE2 TRP 36 -2.042 45.357 11.930 1.00 15.00 C ATOM 536 CE3 TRP 36 -1.068 46.428 9.998 1.00 15.00 C ATOM 537 CZ2 TRP 36 -1.436 46.263 12.786 1.00 15.00 C ATOM 538 CZ3 TRP 36 -0.460 47.337 10.856 1.00 15.00 C ATOM 539 CH2 TRP 36 -0.640 47.255 12.214 1.00 15.00 C ATOM 550 N ILE 37 -3.490 45.739 5.467 1.00 13.29 N ATOM 551 CA ILE 37 -3.515 45.623 4.013 1.00 13.29 C ATOM 552 C ILE 37 -2.217 45.028 3.485 1.00 13.29 C ATOM 553 O ILE 37 -2.156 44.557 2.350 1.00 13.29 O ATOM 554 CB ILE 37 -3.757 46.995 3.357 1.00 13.29 C ATOM 555 CG1 ILE 37 -2.607 47.952 3.682 1.00 13.29 C ATOM 556 CG2 ILE 37 -5.085 47.578 3.816 1.00 13.29 C ATOM 557 CD1 ILE 37 -2.670 49.261 2.927 1.00 13.29 C ATOM 569 N SER 38 -1.179 45.054 4.315 1.00 12.76 N ATOM 570 CA SER 38 0.108 44.475 3.950 1.00 12.76 C ATOM 571 C SER 38 0.032 42.953 3.896 1.00 12.76 C ATOM 572 O SER 38 0.977 42.290 3.471 1.00 12.76 O ATOM 573 CB SER 38 1.172 44.900 4.943 1.00 12.76 C ATOM 574 OG SER 38 0.914 44.371 6.214 1.00 12.76 O ATOM 580 N SER 39 -1.100 42.408 4.328 1.00 10.16 N ATOM 581 CA SER 39 -1.299 40.963 4.335 1.00 10.16 C ATOM 582 C SER 39 -1.466 40.424 2.920 1.00 10.16 C ATOM 583 O SER 39 -1.265 39.235 2.671 1.00 10.16 O ATOM 584 CB SER 39 -2.516 40.608 5.168 1.00 10.16 C ATOM 585 OG SER 39 -3.689 41.096 4.577 1.00 10.16 O ATOM 591 N PHE 40 -1.835 41.304 1.996 1.00 7.56 N ATOM 592 CA PHE 40 -2.055 40.912 0.609 1.00 7.56 C ATOM 593 C PHE 40 -1.150 41.693 -0.335 1.00 7.56 C ATOM 594 O PHE 40 -0.926 41.285 -1.474 1.00 7.56 O ATOM 595 CB PHE 40 -3.518 41.132 0.218 1.00 7.56 C ATOM 596 CG PHE 40 -3.899 42.579 0.082 1.00 7.56 C ATOM 597 CD1 PHE 40 -3.657 43.266 -1.098 1.00 7.56 C ATOM 598 CD2 PHE 40 -4.498 43.256 1.133 1.00 7.56 C ATOM 599 CE1 PHE 40 -4.007 44.597 -1.225 1.00 7.56 C ATOM 600 CE2 PHE 40 -4.849 44.585 1.009 1.00 7.56 C ATOM 601 CZ PHE 40 -4.603 45.257 -0.171 1.00 7.56 C ATOM 611 N ILE 41 -0.630 42.817 0.147 1.00 8.15 N ATOM 612 CA ILE 41 0.349 43.593 -0.605 1.00 8.15 C ATOM 613 C ILE 41 1.715 42.920 -0.587 1.00 8.15 C ATOM 614 O ILE 41 2.329 42.769 0.469 1.00 8.15 O ATOM 615 CB ILE 41 0.470 45.020 -0.040 1.00 8.15 C ATOM 616 CG1 ILE 41 -0.860 45.763 -0.178 1.00 8.15 C ATOM 617 CG2 ILE 41 1.584 45.777 -0.746 1.00 8.15 C ATOM 618 CD1 ILE 41 -0.905 47.079 0.567 1.00 8.15 C ATOM 630 N GLY 42 2.186 42.519 -1.763 1.00 5.89 N ATOM 631 CA GLY 42 3.442 41.785 -1.875 1.00 5.89 C ATOM 632 C GLY 42 3.208 40.281 -1.833 1.00 5.89 C ATOM 633 O GLY 42 4.148 39.493 -1.922 1.00 5.89 O ATOM 637 N ARG 43 1.945 39.887 -1.697 1.00 4.46 N ATOM 638 CA ARG 43 1.581 38.476 -1.670 1.00 4.46 C ATOM 639 C ARG 43 0.729 38.103 -2.876 1.00 4.46 C ATOM 640 O ARG 43 0.310 36.955 -3.022 1.00 4.46 O ATOM 641 CB ARG 43 0.821 38.144 -0.394 1.00 4.46 C ATOM 642 CG ARG 43 1.562 38.464 0.893 1.00 4.46 C ATOM 643 CD ARG 43 2.818 37.681 1.014 1.00 4.46 C ATOM 644 NE ARG 43 3.539 37.996 2.237 1.00 4.46 N ATOM 645 CZ ARG 43 3.329 37.396 3.425 1.00 4.46 C ATOM 646 NH1 ARG 43 2.419 36.454 3.534 1.00 4.46 N ATOM 647 NH2 ARG 43 4.038 37.755 4.482 1.00 4.46 N ATOM 661 N SER 44 0.476 39.082 -3.741 1.00 4.36 N ATOM 662 CA SER 44 -0.305 38.852 -4.950 1.00 4.36 C ATOM 663 C SER 44 -1.689 38.311 -4.616 1.00 4.36 C ATOM 664 O SER 44 -2.202 37.425 -5.301 1.00 4.36 O ATOM 665 CB SER 44 0.420 37.883 -5.864 1.00 4.36 C ATOM 666 OG SER 44 1.664 38.396 -6.254 1.00 4.36 O ATOM 672 N LYS 45 -2.291 38.848 -3.560 1.00 3.40 N ATOM 673 CA LYS 45 -3.640 38.459 -3.166 1.00 3.40 C ATOM 674 C LYS 45 -4.629 39.594 -3.390 1.00 3.40 C ATOM 675 O LYS 45 -4.266 40.768 -3.320 1.00 3.40 O ATOM 676 CB LYS 45 -3.663 38.020 -1.700 1.00 3.40 C ATOM 677 CG LYS 45 -2.892 36.739 -1.414 1.00 3.40 C ATOM 678 CD LYS 45 -3.020 36.333 0.047 1.00 3.40 C ATOM 679 CE LYS 45 -2.271 35.039 0.329 1.00 3.40 C ATOM 680 NZ LYS 45 -2.433 34.599 1.742 1.00 3.40 N TER END