####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS043_3-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS043_3-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 42 2 - 43 4.84 5.44 LCS_AVERAGE: 94.11 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 33 - 44 1.99 10.43 LONGEST_CONTINUOUS_SEGMENT: 12 34 - 45 1.85 10.36 LCS_AVERAGE: 24.28 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 20 - 29 0.34 10.34 LCS_AVERAGE: 16.99 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 8 42 3 5 6 8 16 22 24 27 29 32 35 37 38 39 40 40 40 41 41 42 LCS_GDT V 3 V 3 7 8 42 3 7 11 15 18 22 25 27 29 32 35 37 38 39 40 40 40 41 41 42 LCS_GDT Q 4 Q 4 7 8 42 3 7 11 15 18 22 25 27 29 32 35 37 38 39 40 40 40 41 41 42 LCS_GDT G 5 G 5 7 8 42 3 5 11 15 18 22 25 27 29 32 35 37 38 39 40 40 40 41 41 42 LCS_GDT P 6 P 6 7 8 42 3 7 10 15 18 22 25 27 29 32 35 37 38 39 40 40 40 41 41 42 LCS_GDT W 7 W 7 7 10 42 3 7 11 15 18 22 25 27 29 32 35 37 38 39 40 40 40 41 41 42 LCS_GDT V 8 V 8 7 10 42 3 5 11 15 18 22 25 27 29 32 35 37 38 39 40 40 40 41 41 42 LCS_GDT G 9 G 9 8 11 42 7 7 11 15 18 22 25 27 29 32 35 37 38 39 40 40 40 41 41 42 LCS_GDT S 10 S 10 8 11 42 7 7 9 10 17 22 25 27 29 32 35 37 38 39 40 40 40 41 41 42 LCS_GDT S 11 S 11 8 11 42 7 7 9 9 10 13 17 23 28 32 35 37 38 39 40 40 40 41 41 42 LCS_GDT Y 12 Y 12 8 11 42 7 7 9 9 10 12 17 23 26 31 35 37 38 39 40 40 40 41 41 42 LCS_GDT V 13 V 13 8 11 42 7 7 9 9 10 14 20 23 28 32 35 37 38 39 40 40 40 41 41 42 LCS_GDT A 14 A 14 8 11 42 7 7 9 9 10 12 16 21 25 29 32 36 38 39 40 40 40 41 41 42 LCS_GDT E 15 E 15 8 11 42 7 7 9 9 10 12 15 16 17 20 26 27 33 37 40 40 40 41 41 42 LCS_GDT T 16 T 16 8 11 42 4 5 7 8 9 12 13 15 17 18 19 22 24 30 33 35 37 41 41 42 LCS_GDT G 17 G 17 5 11 42 4 5 5 5 8 12 15 20 25 29 32 36 38 39 40 40 40 41 41 42 LCS_GDT Q 18 Q 18 5 11 42 4 5 5 8 12 17 20 25 29 32 35 37 38 39 40 40 40 41 41 42 LCS_GDT N 19 N 19 5 11 42 4 5 6 9 17 22 25 27 29 32 35 37 38 39 40 40 40 41 41 42 LCS_GDT W 20 W 20 10 11 42 9 10 10 10 10 15 25 27 29 32 35 37 38 39 40 40 40 41 41 42 LCS_GDT A 21 A 21 10 11 42 9 10 10 15 18 22 25 27 29 32 35 37 38 39 40 40 40 41 41 42 LCS_GDT S 22 S 22 10 11 42 9 10 11 15 18 22 25 27 29 32 35 37 38 39 40 40 40 41 41 42 LCS_GDT L 23 L 23 10 11 42 9 10 10 10 16 22 25 27 29 32 35 37 38 39 40 40 40 41 41 42 LCS_GDT A 24 A 24 10 11 42 9 10 10 12 18 22 25 27 29 32 35 37 38 39 40 40 40 41 41 42 LCS_GDT A 25 A 25 10 11 42 9 10 10 15 18 22 25 27 29 32 35 37 38 39 40 40 40 41 41 42 LCS_GDT N 26 N 26 10 11 42 9 10 11 15 18 22 25 27 29 32 35 37 38 39 40 40 40 41 41 42 LCS_GDT E 27 E 27 10 11 42 9 10 11 15 18 22 25 27 29 32 35 37 38 39 40 40 40 41 41 42 LCS_GDT L 28 L 28 10 11 42 9 10 10 15 18 19 25 27 28 30 34 37 38 39 40 40 40 41 41 42 LCS_GDT R 29 R 29 10 11 42 9 10 10 15 18 22 25 27 28 31 34 37 38 39 40 40 40 41 41 42 LCS_GDT V 30 V 30 3 11 42 3 3 3 4 6 7 20 25 28 32 35 37 38 39 40 40 40 41 41 42 LCS_GDT T 31 T 31 3 6 42 3 3 5 9 12 13 20 27 29 32 35 37 38 39 40 40 40 41 41 42 LCS_GDT E 32 E 32 3 6 42 3 3 3 9 12 13 22 26 29 32 35 37 38 39 40 40 40 41 41 42 LCS_GDT R 33 R 33 3 12 42 3 3 5 7 12 14 17 22 26 31 35 37 38 39 40 40 40 41 41 42 LCS_GDT P 34 P 34 3 12 42 1 3 3 9 12 18 22 27 29 32 35 37 38 39 40 40 40 41 41 42 LCS_GDT F 35 F 35 6 12 42 3 7 10 12 17 22 24 27 29 32 35 37 38 39 40 40 40 41 41 42 LCS_GDT W 36 W 36 9 12 42 4 7 10 12 17 22 25 27 29 32 35 37 38 39 40 40 40 41 41 42 LCS_GDT I 37 I 37 9 12 42 4 6 10 12 17 22 25 27 29 32 35 37 38 39 40 40 40 41 41 42 LCS_GDT S 38 S 38 9 12 42 4 7 11 15 18 22 25 27 29 32 35 37 38 39 40 40 40 41 41 42 LCS_GDT S 39 S 39 9 12 42 4 7 9 12 18 22 25 27 29 32 35 37 38 39 40 40 40 41 41 42 LCS_GDT F 40 F 40 9 12 42 4 7 9 12 16 18 25 27 29 32 35 37 38 39 40 40 40 41 41 42 LCS_GDT I 41 I 41 9 12 42 4 7 11 15 18 22 25 27 29 32 35 37 38 39 40 40 40 41 41 42 LCS_GDT G 42 G 42 9 12 42 4 7 9 11 16 18 22 27 29 32 35 37 38 39 40 40 40 41 41 42 LCS_GDT R 43 R 43 9 12 42 4 7 9 12 16 18 18 19 23 28 31 34 37 38 39 40 40 41 41 42 LCS_GDT S 44 S 44 9 12 29 4 7 9 12 16 18 18 19 20 24 31 33 35 37 39 40 40 41 41 42 LCS_GDT K 45 K 45 3 12 29 3 3 4 9 12 17 18 19 20 25 26 31 35 37 39 40 40 41 41 42 LCS_AVERAGE LCS_A: 45.13 ( 16.99 24.28 94.11 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 9 10 11 15 18 22 25 27 29 32 35 37 38 39 40 40 40 41 41 42 GDT PERCENT_AT 20.45 22.73 25.00 34.09 40.91 50.00 56.82 61.36 65.91 72.73 79.55 84.09 86.36 88.64 90.91 90.91 90.91 93.18 93.18 95.45 GDT RMS_LOCAL 0.29 0.34 1.11 1.36 1.59 2.16 2.34 2.51 3.01 3.30 3.57 3.73 3.93 4.09 4.34 4.37 4.27 4.53 4.53 4.79 GDT RMS_ALL_AT 10.18 10.34 7.19 7.32 7.03 6.23 6.37 6.12 5.71 5.53 5.49 5.48 5.42 5.43 5.46 5.65 5.39 5.40 5.40 5.43 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 27 E 27 # possible swapping detected: E 32 E 32 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 3.958 0 0.378 0.437 6.376 31.818 25.455 - LGA V 3 V 3 1.600 0 0.627 0.958 5.926 58.182 34.805 5.492 LGA Q 4 Q 4 1.447 0 0.041 0.206 5.518 48.636 26.061 5.388 LGA G 5 G 5 1.418 0 0.079 0.079 3.671 52.273 52.273 - LGA P 6 P 6 1.898 0 0.032 0.073 2.192 47.727 47.273 1.626 LGA W 7 W 7 1.365 0 0.380 1.255 11.705 58.182 22.857 11.705 LGA V 8 V 8 2.764 0 0.624 0.597 4.970 49.545 30.909 4.351 LGA G 9 G 9 2.238 0 0.234 0.234 2.888 49.545 49.545 - LGA S 10 S 10 2.652 0 0.011 0.171 5.917 28.636 32.121 1.510 LGA S 11 S 11 6.583 0 0.147 0.586 8.803 1.364 0.909 7.710 LGA Y 12 Y 12 7.126 0 0.039 1.263 9.058 0.000 0.000 9.058 LGA V 13 V 13 7.593 0 0.018 0.043 11.498 0.000 0.000 9.345 LGA A 14 A 14 11.916 0 0.018 0.019 15.264 0.000 0.000 - LGA E 15 E 15 14.403 0 0.612 1.074 17.135 0.000 0.000 17.135 LGA T 16 T 16 15.873 0 0.662 1.022 18.595 0.000 0.000 16.242 LGA G 17 G 17 11.771 0 0.117 0.117 13.223 0.000 0.000 - LGA Q 18 Q 18 6.007 0 0.101 0.277 8.369 0.000 0.000 5.235 LGA N 19 N 19 2.818 0 0.594 1.409 8.913 39.545 20.455 8.036 LGA W 20 W 20 3.624 0 0.614 1.268 14.205 25.909 7.403 14.183 LGA A 21 A 21 0.832 0 0.048 0.047 1.368 82.273 78.909 - LGA S 22 S 22 2.294 0 0.039 0.620 3.595 45.000 36.364 2.913 LGA L 23 L 23 2.887 0 0.033 0.129 6.454 35.455 18.409 6.454 LGA A 24 A 24 2.191 0 0.009 0.015 2.719 44.545 41.091 - LGA A 25 A 25 1.691 0 0.025 0.025 2.197 55.000 51.636 - LGA N 26 N 26 1.079 0 0.006 0.079 3.551 82.273 54.545 3.109 LGA E 27 E 27 1.908 0 0.083 0.715 6.045 45.455 23.232 5.439 LGA L 28 L 28 3.294 0 0.212 0.241 5.724 23.182 12.500 5.034 LGA R 29 R 29 2.787 0 0.383 1.356 14.495 25.000 9.091 14.495 LGA V 30 V 30 6.499 0 0.623 0.587 10.860 1.364 0.779 10.860 LGA T 31 T 31 7.829 0 0.108 0.119 9.748 0.000 0.000 7.493 LGA E 32 E 32 8.241 0 0.411 1.345 11.100 0.000 0.000 8.909 LGA R 33 R 33 9.305 0 0.071 0.166 14.778 0.000 0.000 14.778 LGA P 34 P 34 7.216 0 0.071 0.078 10.400 0.000 0.000 10.120 LGA F 35 F 35 3.667 0 0.390 1.439 7.192 13.182 7.934 7.015 LGA W 36 W 36 2.967 0 0.300 0.239 5.785 37.273 14.026 5.634 LGA I 37 I 37 2.996 0 0.018 0.361 6.037 40.455 22.273 6.037 LGA S 38 S 38 1.832 0 0.018 0.071 3.476 45.000 36.061 3.335 LGA S 39 S 39 2.712 0 0.076 0.081 4.301 29.091 26.970 2.916 LGA F 40 F 40 3.551 0 0.014 0.735 8.697 20.909 8.099 8.697 LGA I 41 I 41 1.348 0 0.023 0.074 4.776 37.727 27.273 4.776 LGA G 42 G 42 5.139 0 0.070 0.070 7.358 4.545 4.545 - LGA R 43 R 43 7.139 0 0.080 0.958 10.136 0.000 0.000 10.136 LGA S 44 S 44 8.784 0 0.059 0.675 9.578 0.000 0.000 9.578 LGA K 45 K 45 9.095 0 0.123 0.378 9.161 0.000 0.000 8.763 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 5.363 5.325 6.855 26.343 18.723 5.714 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 27 2.51 52.273 47.806 1.034 LGA_LOCAL RMSD: 2.511 Number of atoms: 27 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 6.115 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 5.363 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.718568 * X + -0.331160 * Y + -0.611550 * Z + 14.108171 Y_new = 0.643326 * X + 0.017519 * Y + -0.765392 * Z + 32.745991 Z_new = 0.264181 * X + -0.943412 * Y + 0.200456 * Z + 12.391648 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.411386 -0.267355 -1.361431 [DEG: 138.1622 -15.3183 -78.0042 ] ZXZ: -0.674133 1.368973 2.868559 [DEG: -38.6249 78.4364 164.3563 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS043_3-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS043_3-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 27 2.51 47.806 5.36 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS043_3-D1 PFRMAT TS TARGET T0953s2 MODEL 3 PARENT N/A ATOM 20 N ALA 2 11.030 33.432 11.478 1.00 16.78 N ATOM 21 CA ALA 2 10.092 33.726 10.401 1.00 16.78 C ATOM 22 C ALA 2 9.311 35.002 10.683 1.00 16.78 C ATOM 23 O ALA 2 8.117 34.959 10.977 1.00 16.78 O ATOM 24 CB ALA 2 9.140 32.557 10.194 1.00 16.78 C ATOM 30 N VAL 3 9.992 36.139 10.591 1.00 17.34 N ATOM 31 CA VAL 3 9.365 37.431 10.847 1.00 17.34 C ATOM 32 C VAL 3 9.660 38.418 9.726 1.00 17.34 C ATOM 33 O VAL 3 9.135 39.532 9.712 1.00 17.34 O ATOM 34 CB VAL 3 9.865 38.012 12.183 1.00 17.34 C ATOM 35 CG1 VAL 3 9.445 37.119 13.342 1.00 17.34 C ATOM 36 CG2 VAL 3 11.376 38.172 12.145 1.00 17.34 C ATOM 46 N GLN 4 10.504 38.004 8.786 1.00 16.09 N ATOM 47 CA GLN 4 10.807 38.819 7.616 1.00 16.09 C ATOM 48 C GLN 4 10.783 37.985 6.342 1.00 16.09 C ATOM 49 O GLN 4 11.202 36.827 6.340 1.00 16.09 O ATOM 50 CB GLN 4 12.173 39.495 7.772 1.00 16.09 C ATOM 51 CG GLN 4 12.233 40.525 8.887 1.00 16.09 C ATOM 52 CD GLN 4 13.582 41.215 8.965 1.00 16.09 C ATOM 53 OE1 GLN 4 14.611 40.572 9.186 1.00 16.09 O ATOM 54 NE2 GLN 4 13.585 42.531 8.784 1.00 16.09 N ATOM 63 N GLY 5 10.292 38.579 5.260 1.00 14.99 N ATOM 64 CA GLY 5 10.242 37.901 3.971 1.00 14.99 C ATOM 65 C GLY 5 8.817 37.488 3.620 1.00 14.99 C ATOM 66 O GLY 5 8.011 37.197 4.504 1.00 14.99 O ATOM 70 N PRO 6 8.515 37.464 2.327 1.00 14.75 N ATOM 71 CA PRO 6 7.173 37.136 1.860 1.00 14.75 C ATOM 72 C PRO 6 6.888 35.647 2.008 1.00 14.75 C ATOM 73 O PRO 6 5.742 35.210 1.897 1.00 14.75 O ATOM 74 CB PRO 6 7.207 37.561 0.389 1.00 14.75 C ATOM 75 CG PRO 6 8.639 37.424 0.001 1.00 14.75 C ATOM 76 CD PRO 6 9.401 37.864 1.222 1.00 14.75 C ATOM 84 N TRP 7 7.937 34.870 2.257 1.00 14.70 N ATOM 85 CA TRP 7 7.798 33.430 2.436 1.00 14.70 C ATOM 86 C TRP 7 7.175 33.100 3.786 1.00 14.70 C ATOM 87 O TRP 7 6.695 31.987 4.004 1.00 14.70 O ATOM 88 CB TRP 7 9.161 32.744 2.319 1.00 14.70 C ATOM 89 CG TRP 7 10.169 33.244 3.309 1.00 14.70 C ATOM 90 CD1 TRP 7 11.079 34.240 3.113 1.00 14.70 C ATOM 91 CD2 TRP 7 10.376 32.772 4.662 1.00 14.70 C ATOM 92 NE1 TRP 7 11.836 34.419 4.244 1.00 14.70 N ATOM 93 CE2 TRP 7 11.418 33.530 5.203 1.00 14.70 C ATOM 94 CE3 TRP 7 9.770 31.782 5.445 1.00 14.70 C ATOM 95 CZ2 TRP 7 11.874 33.332 6.497 1.00 14.70 C ATOM 96 CZ3 TRP 7 10.227 31.584 6.743 1.00 14.70 C ATOM 97 CH2 TRP 7 11.252 32.340 7.255 1.00 14.70 C ATOM 108 N VAL 8 7.184 34.073 4.690 1.00 12.61 N ATOM 109 CA VAL 8 6.675 33.869 6.041 1.00 12.61 C ATOM 110 C VAL 8 5.170 33.635 6.032 1.00 12.61 C ATOM 111 O VAL 8 4.399 34.502 5.622 1.00 12.61 O ATOM 112 CB VAL 8 6.996 35.090 6.924 1.00 12.61 C ATOM 113 CG1 VAL 8 6.356 34.939 8.295 1.00 12.61 C ATOM 114 CG2 VAL 8 8.503 35.259 7.046 1.00 12.61 C ATOM 124 N GLY 9 4.757 32.457 6.488 1.00 12.21 N ATOM 125 CA GLY 9 3.341 32.121 6.570 1.00 12.21 C ATOM 126 C GLY 9 2.934 31.178 5.445 1.00 12.21 C ATOM 127 O GLY 9 1.872 30.556 5.497 1.00 12.21 O ATOM 131 N SER 10 3.781 31.077 4.428 1.00 14.12 N ATOM 132 CA SER 10 3.460 30.305 3.234 1.00 14.12 C ATOM 133 C SER 10 3.356 28.819 3.550 1.00 14.12 C ATOM 134 O SER 10 2.695 28.066 2.835 1.00 14.12 O ATOM 135 CB SER 10 4.511 30.532 2.165 1.00 14.12 C ATOM 136 OG SER 10 5.740 29.976 2.545 1.00 14.12 O ATOM 142 N SER 11 4.014 28.401 4.627 1.00 14.89 N ATOM 143 CA SER 11 3.963 27.011 5.064 1.00 14.89 C ATOM 144 C SER 11 2.607 26.673 5.670 1.00 14.89 C ATOM 145 O SER 11 2.266 25.502 5.838 1.00 14.89 O ATOM 146 CB SER 11 5.060 26.742 6.076 1.00 14.89 C ATOM 147 OG SER 11 4.818 27.429 7.273 1.00 14.89 O ATOM 153 N TYR 12 1.836 27.705 5.996 1.00 12.79 N ATOM 154 CA TYR 12 0.509 27.520 6.570 1.00 12.79 C ATOM 155 C TYR 12 -0.580 27.841 5.554 1.00 12.79 C ATOM 156 O TYR 12 -1.699 27.336 5.649 1.00 12.79 O ATOM 157 CB TYR 12 0.340 28.386 7.820 1.00 12.79 C ATOM 158 CG TYR 12 1.339 28.079 8.915 1.00 12.79 C ATOM 159 CD1 TYR 12 2.346 28.987 9.208 1.00 12.79 C ATOM 160 CD2 TYR 12 1.248 26.891 9.624 1.00 12.79 C ATOM 161 CE1 TYR 12 3.258 28.708 10.207 1.00 12.79 C ATOM 162 CE2 TYR 12 2.160 26.612 10.623 1.00 12.79 C ATOM 163 CZ TYR 12 3.162 27.516 10.915 1.00 12.79 C ATOM 164 OH TYR 12 4.070 27.238 11.910 1.00 12.79 O ATOM 174 N VAL 13 -0.246 28.682 4.583 1.00 12.58 N ATOM 175 CA VAL 13 -1.149 28.973 3.475 1.00 12.58 C ATOM 176 C VAL 13 -1.205 27.811 2.491 1.00 12.58 C ATOM 177 O VAL 13 -2.285 27.371 2.098 1.00 12.58 O ATOM 178 CB VAL 13 -0.697 30.246 2.736 1.00 12.58 C ATOM 179 CG1 VAL 13 -1.527 30.456 1.479 1.00 12.58 C ATOM 180 CG2 VAL 13 -0.807 31.448 3.662 1.00 12.58 C ATOM 190 N ALA 14 -0.035 27.319 2.098 1.00 14.64 N ATOM 191 CA ALA 14 0.052 26.230 1.133 1.00 14.64 C ATOM 192 C ALA 14 -0.475 24.928 1.723 1.00 14.64 C ATOM 193 O ALA 14 -1.130 24.144 1.037 1.00 14.64 O ATOM 194 CB ALA 14 1.488 26.053 0.661 1.00 14.64 C ATOM 200 N GLU 15 -0.184 24.703 3.000 1.00 15.02 N ATOM 201 CA GLU 15 -0.541 23.452 3.658 1.00 15.02 C ATOM 202 C GLU 15 -2.027 23.409 3.993 1.00 15.02 C ATOM 203 O GLU 15 -2.512 24.195 4.809 1.00 15.02 O ATOM 204 CB GLU 15 0.284 23.266 4.933 1.00 15.02 C ATOM 205 CG GLU 15 0.037 21.949 5.655 1.00 15.02 C ATOM 206 CD GLU 15 0.915 21.770 6.862 1.00 15.02 C ATOM 207 OE1 GLU 15 1.764 22.599 7.084 1.00 15.02 O ATOM 208 OE2 GLU 15 0.737 20.801 7.563 1.00 15.02 O ATOM 215 N THR 16 -2.745 22.488 3.360 1.00 14.26 N ATOM 216 CA THR 16 -4.175 22.333 3.599 1.00 14.26 C ATOM 217 C THR 16 -4.448 21.889 5.031 1.00 14.26 C ATOM 218 O THR 16 -3.843 20.936 5.523 1.00 14.26 O ATOM 219 CB THR 16 -4.795 21.322 2.618 1.00 14.26 C ATOM 220 OG1 THR 16 -4.589 21.772 1.272 1.00 14.26 O ATOM 221 CG2 THR 16 -6.287 21.173 2.876 1.00 14.26 C ATOM 229 N GLY 17 -5.363 22.586 5.697 1.00 14.84 N ATOM 230 CA GLY 17 -5.685 22.294 7.088 1.00 14.84 C ATOM 231 C GLY 17 -5.117 23.358 8.019 1.00 14.84 C ATOM 232 O GLY 17 -5.542 23.483 9.167 1.00 14.84 O ATOM 236 N GLN 18 -4.154 24.124 7.517 1.00 13.32 N ATOM 237 CA GLN 18 -3.565 25.216 8.283 1.00 13.32 C ATOM 238 C GLN 18 -4.181 26.555 7.894 1.00 13.32 C ATOM 239 O GLN 18 -4.833 26.671 6.857 1.00 13.32 O ATOM 240 CB GLN 18 -2.049 25.259 8.078 1.00 13.32 C ATOM 241 CG GLN 18 -1.324 24.004 8.532 1.00 13.32 C ATOM 242 CD GLN 18 -1.465 23.761 10.022 1.00 13.32 C ATOM 243 OE1 GLN 18 -1.185 24.643 10.838 1.00 13.32 O ATOM 244 NE2 GLN 18 -1.900 22.560 10.387 1.00 13.32 N ATOM 253 N ASN 19 -3.970 27.563 8.732 1.00 12.03 N ATOM 254 CA ASN 19 -4.503 28.896 8.478 1.00 12.03 C ATOM 255 C ASN 19 -3.576 29.974 9.026 1.00 12.03 C ATOM 256 O ASN 19 -3.573 30.253 10.225 1.00 12.03 O ATOM 257 CB ASN 19 -5.894 29.036 9.069 1.00 12.03 C ATOM 258 CG ASN 19 -6.537 30.351 8.727 1.00 12.03 C ATOM 259 OD1 ASN 19 -5.856 31.376 8.606 1.00 12.03 O ATOM 260 ND2 ASN 19 -7.837 30.342 8.571 1.00 12.03 N ATOM 267 N TRP 20 -2.790 30.578 8.141 1.00 10.07 N ATOM 268 CA TRP 20 -1.782 31.548 8.548 1.00 10.07 C ATOM 269 C TRP 20 -2.419 32.756 9.222 1.00 10.07 C ATOM 270 O TRP 20 -1.907 33.265 10.220 1.00 10.07 O ATOM 271 CB TRP 20 -0.964 32.006 7.339 1.00 10.07 C ATOM 272 CG TRP 20 0.011 33.100 7.656 1.00 10.07 C ATOM 273 CD1 TRP 20 0.192 34.257 6.960 1.00 10.07 C ATOM 274 CD2 TRP 20 0.950 33.143 8.759 1.00 10.07 C ATOM 275 NE1 TRP 20 1.173 35.015 7.549 1.00 10.07 N ATOM 276 CE2 TRP 20 1.647 34.349 8.652 1.00 10.07 C ATOM 277 CE3 TRP 20 1.248 32.270 9.811 1.00 10.07 C ATOM 278 CZ2 TRP 20 2.632 34.710 9.558 1.00 10.07 C ATOM 279 CZ3 TRP 20 2.235 32.632 10.721 1.00 10.07 C ATOM 280 CH2 TRP 20 2.908 33.821 10.597 1.00 10.07 C ATOM 291 N ALA 21 -3.539 33.211 8.670 1.00 9.51 N ATOM 292 CA ALA 21 -4.222 34.393 9.186 1.00 9.51 C ATOM 293 C ALA 21 -4.649 34.193 10.634 1.00 9.51 C ATOM 294 O ALA 21 -4.501 35.090 11.465 1.00 9.51 O ATOM 295 CB ALA 21 -5.426 34.729 8.320 1.00 9.51 C ATOM 301 N SER 22 -5.181 33.012 10.931 1.00 10.35 N ATOM 302 CA SER 22 -5.602 32.681 12.288 1.00 10.35 C ATOM 303 C SER 22 -4.407 32.585 13.228 1.00 10.35 C ATOM 304 O SER 22 -4.413 33.164 14.314 1.00 10.35 O ATOM 305 CB SER 22 -6.367 31.372 12.291 1.00 10.35 C ATOM 306 OG SER 22 -6.764 31.026 13.590 1.00 10.35 O ATOM 312 N LEU 23 -3.385 31.851 12.803 1.00 9.59 N ATOM 313 CA LEU 23 -2.193 31.654 13.619 1.00 9.59 C ATOM 314 C LEU 23 -1.466 32.971 13.861 1.00 9.59 C ATOM 315 O LEU 23 -0.987 33.233 14.965 1.00 9.59 O ATOM 316 CB LEU 23 -1.245 30.657 12.939 1.00 9.59 C ATOM 317 CG LEU 23 -1.745 29.209 12.864 1.00 9.59 C ATOM 318 CD1 LEU 23 -0.806 28.392 11.986 1.00 9.59 C ATOM 319 CD2 LEU 23 -1.825 28.625 14.267 1.00 9.59 C ATOM 331 N ALA 24 -1.387 33.796 12.824 1.00 7.71 N ATOM 332 CA ALA 24 -0.739 35.098 12.928 1.00 7.71 C ATOM 333 C ALA 24 -1.503 36.020 13.869 1.00 7.71 C ATOM 334 O ALA 24 -0.906 36.740 14.669 1.00 7.71 O ATOM 335 CB ALA 24 -0.607 35.736 11.553 1.00 7.71 C ATOM 341 N ALA 25 -2.828 35.994 13.769 1.00 8.15 N ATOM 342 CA ALA 25 -3.677 36.805 14.632 1.00 8.15 C ATOM 343 C ALA 25 -3.461 36.459 16.100 1.00 8.15 C ATOM 344 O ALA 25 -3.397 37.344 16.952 1.00 8.15 O ATOM 345 CB ALA 25 -5.141 36.623 14.256 1.00 8.15 C ATOM 351 N ASN 26 -3.349 35.167 16.388 1.00 8.85 N ATOM 352 CA ASN 26 -3.102 34.704 17.749 1.00 8.85 C ATOM 353 C ASN 26 -1.753 35.189 18.260 1.00 8.85 C ATOM 354 O ASN 26 -1.622 35.585 19.417 1.00 8.85 O ATOM 355 CB ASN 26 -3.189 33.191 17.821 1.00 8.85 C ATOM 356 CG ASN 26 -4.604 32.688 17.725 1.00 8.85 C ATOM 357 OD1 ASN 26 -5.558 33.430 17.981 1.00 8.85 O ATOM 358 ND2 ASN 26 -4.755 31.440 17.361 1.00 8.85 N ATOM 365 N GLU 27 -0.749 35.156 17.389 1.00 7.80 N ATOM 366 CA GLU 27 0.586 35.624 17.740 1.00 7.80 C ATOM 367 C GLU 27 0.603 37.133 17.950 1.00 7.80 C ATOM 368 O GLU 27 1.228 37.631 18.887 1.00 7.80 O ATOM 369 CB GLU 27 1.589 35.240 16.651 1.00 7.80 C ATOM 370 CG GLU 27 3.032 35.612 16.965 1.00 7.80 C ATOM 371 CD GLU 27 3.588 34.858 18.140 1.00 7.80 C ATOM 372 OE1 GLU 27 2.961 33.920 18.570 1.00 7.80 O ATOM 373 OE2 GLU 27 4.642 35.220 18.608 1.00 7.80 O ATOM 380 N LEU 28 -0.087 37.855 17.075 1.00 6.87 N ATOM 381 CA LEU 28 -0.172 39.306 17.177 1.00 6.87 C ATOM 382 C LEU 28 -0.932 39.727 18.429 1.00 6.87 C ATOM 383 O LEU 28 -0.603 40.733 19.058 1.00 6.87 O ATOM 384 CB LEU 28 -0.861 39.886 15.936 1.00 6.87 C ATOM 385 CG LEU 28 -0.060 39.803 14.631 1.00 6.87 C ATOM 386 CD1 LEU 28 -0.959 40.170 13.458 1.00 6.87 C ATOM 387 CD2 LEU 28 1.141 40.734 14.711 1.00 6.87 C ATOM 399 N ARG 29 -1.949 38.950 18.786 1.00 8.31 N ATOM 400 CA ARG 29 -2.690 39.177 20.021 1.00 8.31 C ATOM 401 C ARG 29 -1.766 39.150 21.231 1.00 8.31 C ATOM 402 O ARG 29 -1.842 40.017 22.101 1.00 8.31 O ATOM 403 CB ARG 29 -3.779 38.129 20.193 1.00 8.31 C ATOM 404 CG ARG 29 -4.645 38.303 21.431 1.00 8.31 C ATOM 405 CD ARG 29 -5.734 37.294 21.485 1.00 8.31 C ATOM 406 NE ARG 29 -6.542 37.433 22.687 1.00 8.31 N ATOM 407 CZ ARG 29 -7.580 36.636 23.006 1.00 8.31 C ATOM 408 NH1 ARG 29 -7.925 35.652 22.204 1.00 8.31 N ATOM 409 NH2 ARG 29 -8.253 36.844 24.124 1.00 8.31 N ATOM 423 N VAL 30 -0.895 38.149 21.281 1.00 11.75 N ATOM 424 CA VAL 30 0.074 38.030 22.364 1.00 11.75 C ATOM 425 C VAL 30 0.985 39.250 22.425 1.00 11.75 C ATOM 426 O VAL 30 1.295 39.750 23.506 1.00 11.75 O ATOM 427 CB VAL 30 0.930 36.763 22.178 1.00 11.75 C ATOM 428 CG1 VAL 30 2.091 36.756 23.162 1.00 11.75 C ATOM 429 CG2 VAL 30 0.066 35.524 22.353 1.00 11.75 C ATOM 439 N THR 31 1.409 39.725 21.259 1.00 14.39 N ATOM 440 CA THR 31 2.336 40.848 21.181 1.00 14.39 C ATOM 441 C THR 31 1.592 42.177 21.183 1.00 14.39 C ATOM 442 O THR 31 2.196 43.236 21.012 1.00 14.39 O ATOM 443 CB THR 31 3.218 40.750 19.923 1.00 14.39 C ATOM 444 OG1 THR 31 2.392 40.784 18.752 1.00 14.39 O ATOM 445 CG2 THR 31 4.025 39.460 19.935 1.00 14.39 C ATOM 453 N GLU 32 0.279 42.115 21.377 1.00 17.01 N ATOM 454 CA GLU 32 -0.537 43.318 21.484 1.00 17.01 C ATOM 455 C GLU 32 -0.481 44.137 20.202 1.00 17.01 C ATOM 456 O GLU 32 -0.172 45.329 20.227 1.00 17.01 O ATOM 457 CB GLU 32 -0.075 44.172 22.667 1.00 17.01 C ATOM 458 CG GLU 32 -0.179 43.481 24.019 1.00 17.01 C ATOM 459 CD GLU 32 0.196 44.380 25.165 1.00 17.01 C ATOM 460 OE1 GLU 32 0.708 45.445 24.918 1.00 17.01 O ATOM 461 OE2 GLU 32 -0.030 44.000 26.290 1.00 17.01 O ATOM 468 N ARG 33 -0.782 43.492 19.080 1.00 18.13 N ATOM 469 CA ARG 33 -0.804 44.169 17.788 1.00 18.13 C ATOM 470 C ARG 33 -2.090 43.869 17.029 1.00 18.13 C ATOM 471 O ARG 33 -2.634 42.768 17.121 1.00 18.13 O ATOM 472 CB ARG 33 0.390 43.748 16.944 1.00 18.13 C ATOM 473 CG ARG 33 1.744 44.164 17.498 1.00 18.13 C ATOM 474 CD ARG 33 1.934 45.635 17.438 1.00 18.13 C ATOM 475 NE ARG 33 3.269 46.028 17.857 1.00 18.13 N ATOM 476 CZ ARG 33 3.640 46.233 19.136 1.00 18.13 C ATOM 477 NH1 ARG 33 2.766 46.080 20.106 1.00 18.13 N ATOM 478 NH2 ARG 33 4.882 46.589 19.415 1.00 18.13 N ATOM 492 N PRO 34 -2.572 44.854 16.280 1.00 17.13 N ATOM 493 CA PRO 34 -3.713 44.654 15.394 1.00 17.13 C ATOM 494 C PRO 34 -3.467 43.498 14.432 1.00 17.13 C ATOM 495 O PRO 34 -2.331 43.244 14.029 1.00 17.13 O ATOM 496 CB PRO 34 -3.813 45.992 14.655 1.00 17.13 C ATOM 497 CG PRO 34 -3.181 46.971 15.584 1.00 17.13 C ATOM 498 CD PRO 34 -2.035 46.215 16.201 1.00 17.13 C ATOM 506 N PHE 35 -4.537 42.802 14.065 1.00 16.48 N ATOM 507 CA PHE 35 -4.424 41.585 13.269 1.00 16.48 C ATOM 508 C PHE 35 -4.180 41.909 11.801 1.00 16.48 C ATOM 509 O PHE 35 -5.038 41.666 10.952 1.00 16.48 O ATOM 510 CB PHE 35 -5.690 40.737 13.408 1.00 16.48 C ATOM 511 CG PHE 35 -5.939 40.242 14.803 1.00 16.48 C ATOM 512 CD1 PHE 35 -4.943 40.310 15.766 1.00 16.48 C ATOM 513 CD2 PHE 35 -7.169 39.706 15.156 1.00 16.48 C ATOM 514 CE1 PHE 35 -5.171 39.854 17.051 1.00 16.48 C ATOM 515 CE2 PHE 35 -7.399 39.251 16.440 1.00 16.48 C ATOM 516 CZ PHE 35 -6.398 39.325 17.389 1.00 16.48 C ATOM 526 N TRP 36 -3.006 42.456 11.508 1.00 15.00 N ATOM 527 CA TRP 36 -2.607 42.723 10.131 1.00 15.00 C ATOM 528 C TRP 36 -1.173 42.274 9.876 1.00 15.00 C ATOM 529 O TRP 36 -0.276 43.099 9.705 1.00 15.00 O ATOM 530 CB TRP 36 -2.743 44.214 9.816 1.00 15.00 C ATOM 531 CG TRP 36 -4.153 44.714 9.890 1.00 15.00 C ATOM 532 CD1 TRP 36 -4.721 45.403 10.920 1.00 15.00 C ATOM 533 CD2 TRP 36 -5.189 44.567 8.888 1.00 15.00 C ATOM 534 NE1 TRP 36 -6.031 45.694 10.630 1.00 15.00 N ATOM 535 CE2 TRP 36 -6.334 45.190 9.390 1.00 15.00 C ATOM 536 CE3 TRP 36 -5.234 43.966 7.624 1.00 15.00 C ATOM 537 CZ2 TRP 36 -7.521 45.231 8.675 1.00 15.00 C ATOM 538 CZ3 TRP 36 -6.423 44.008 6.906 1.00 15.00 C ATOM 539 CH2 TRP 36 -7.537 44.626 7.418 1.00 15.00 C ATOM 550 N ILE 37 -0.965 40.963 9.852 1.00 13.29 N ATOM 551 CA ILE 37 0.380 40.401 9.893 1.00 13.29 C ATOM 552 C ILE 37 1.209 40.870 8.704 1.00 13.29 C ATOM 553 O ILE 37 2.434 40.961 8.787 1.00 13.29 O ATOM 554 CB ILE 37 0.331 38.861 9.910 1.00 13.29 C ATOM 555 CG1 ILE 37 1.701 38.288 10.283 1.00 13.29 C ATOM 556 CG2 ILE 37 -0.122 38.329 8.559 1.00 13.29 C ATOM 557 CD1 ILE 37 2.152 38.648 11.681 1.00 13.29 C ATOM 569 N SER 38 0.535 41.166 7.598 1.00 12.76 N ATOM 570 CA SER 38 1.213 41.562 6.370 1.00 12.76 C ATOM 571 C SER 38 1.916 42.904 6.536 1.00 12.76 C ATOM 572 O SER 38 2.821 43.240 5.773 1.00 12.76 O ATOM 573 CB SER 38 0.219 41.639 5.226 1.00 12.76 C ATOM 574 OG SER 38 -0.679 42.697 5.413 1.00 12.76 O ATOM 580 N SER 39 1.492 43.667 7.538 1.00 10.16 N ATOM 581 CA SER 39 2.067 44.982 7.795 1.00 10.16 C ATOM 582 C SER 39 3.164 44.908 8.848 1.00 10.16 C ATOM 583 O SER 39 3.729 45.928 9.244 1.00 10.16 O ATOM 584 CB SER 39 0.986 45.945 8.244 1.00 10.16 C ATOM 585 OG SER 39 0.469 45.573 9.492 1.00 10.16 O ATOM 591 N PHE 40 3.462 43.694 9.301 1.00 7.56 N ATOM 592 CA PHE 40 4.458 43.489 10.346 1.00 7.56 C ATOM 593 C PHE 40 5.611 42.629 9.845 1.00 7.56 C ATOM 594 O PHE 40 6.752 42.790 10.278 1.00 7.56 O ATOM 595 CB PHE 40 3.821 42.832 11.572 1.00 7.56 C ATOM 596 CG PHE 40 2.808 43.699 12.265 1.00 7.56 C ATOM 597 CD1 PHE 40 1.455 43.396 12.201 1.00 7.56 C ATOM 598 CD2 PHE 40 3.204 44.818 12.981 1.00 7.56 C ATOM 599 CE1 PHE 40 0.523 44.193 12.838 1.00 7.56 C ATOM 600 CE2 PHE 40 2.275 45.614 13.620 1.00 7.56 C ATOM 601 CZ PHE 40 0.933 45.301 13.548 1.00 7.56 C ATOM 611 N ILE 41 5.308 41.715 8.929 1.00 8.15 N ATOM 612 CA ILE 41 6.334 40.903 8.287 1.00 8.15 C ATOM 613 C ILE 41 7.301 41.769 7.490 1.00 8.15 C ATOM 614 O ILE 41 6.895 42.504 6.590 1.00 8.15 O ATOM 615 CB ILE 41 5.700 39.852 7.358 1.00 8.15 C ATOM 616 CG1 ILE 41 4.875 38.850 8.169 1.00 8.15 C ATOM 617 CG2 ILE 41 6.775 39.134 6.556 1.00 8.15 C ATOM 618 CD1 ILE 41 4.017 37.939 7.323 1.00 8.15 C ATOM 630 N GLY 42 8.584 41.677 7.826 1.00 5.89 N ATOM 631 CA GLY 42 9.594 42.551 7.241 1.00 5.89 C ATOM 632 C GLY 42 10.076 43.587 8.247 1.00 5.89 C ATOM 633 O GLY 42 11.121 44.210 8.060 1.00 5.89 O ATOM 637 N ARG 43 9.309 43.768 9.317 1.00 4.46 N ATOM 638 CA ARG 43 9.652 44.734 10.353 1.00 4.46 C ATOM 639 C ARG 43 10.136 44.038 11.618 1.00 4.46 C ATOM 640 O ARG 43 10.116 42.811 11.709 1.00 4.46 O ATOM 641 CB ARG 43 8.454 45.610 10.686 1.00 4.46 C ATOM 642 CG ARG 43 7.927 46.442 9.528 1.00 4.46 C ATOM 643 CD ARG 43 6.606 47.044 9.840 1.00 4.46 C ATOM 644 NE ARG 43 6.700 48.048 10.888 1.00 4.46 N ATOM 645 CZ ARG 43 5.647 48.566 11.548 1.00 4.46 C ATOM 646 NH1 ARG 43 4.429 48.166 11.258 1.00 4.46 N ATOM 647 NH2 ARG 43 5.838 49.476 12.487 1.00 4.46 N ATOM 661 N SER 44 10.571 44.829 12.593 1.00 4.36 N ATOM 662 CA SER 44 11.011 44.293 13.876 1.00 4.36 C ATOM 663 C SER 44 9.832 43.774 14.690 1.00 4.36 C ATOM 664 O SER 44 8.683 44.136 14.436 1.00 4.36 O ATOM 665 CB SER 44 11.749 45.359 14.663 1.00 4.36 C ATOM 666 OG SER 44 10.878 46.382 15.061 1.00 4.36 O ATOM 672 N LYS 45 10.124 42.925 15.669 1.00 3.40 N ATOM 673 CA LYS 45 9.084 42.316 16.490 1.00 3.40 C ATOM 674 C LYS 45 9.365 42.520 17.974 1.00 3.40 C ATOM 675 O LYS 45 10.415 42.120 18.476 1.00 3.40 O ATOM 676 CB LYS 45 8.959 40.824 16.178 1.00 3.40 C ATOM 677 CG LYS 45 7.881 40.103 16.975 1.00 3.40 C ATOM 678 CD LYS 45 7.855 38.616 16.652 1.00 3.40 C ATOM 679 CE LYS 45 6.773 37.895 17.443 1.00 3.40 C ATOM 680 NZ LYS 45 6.784 36.429 17.191 1.00 3.40 N TER END