####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS043_2-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS043_2-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 43 2 - 44 4.91 5.18 LCS_AVERAGE: 97.68 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 23 22 - 44 1.95 7.42 LCS_AVERAGE: 42.72 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 13 7 - 19 0.40 13.85 LCS_AVERAGE: 22.47 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 3 43 3 3 3 4 4 4 7 9 11 19 21 24 27 28 38 39 41 42 43 43 LCS_GDT V 3 V 3 3 4 43 3 3 3 4 4 4 7 9 11 11 12 13 27 28 31 39 41 42 43 43 LCS_GDT Q 4 Q 4 3 6 43 3 3 5 6 10 16 21 25 30 33 36 36 37 39 40 40 41 42 43 43 LCS_GDT G 5 G 5 4 6 43 0 4 8 15 19 23 25 27 30 33 36 36 37 39 40 40 41 42 43 43 LCS_GDT P 6 P 6 4 14 43 3 4 5 5 6 8 15 17 30 33 36 36 37 39 40 40 41 42 43 43 LCS_GDT W 7 W 7 13 17 43 5 13 13 15 19 23 25 27 30 33 36 36 37 39 40 40 41 42 43 43 LCS_GDT V 8 V 8 13 17 43 12 13 13 13 15 19 23 27 30 33 36 36 37 39 40 40 41 42 43 43 LCS_GDT G 9 G 9 13 17 43 12 13 13 16 19 23 25 27 30 33 36 36 37 39 40 40 41 42 43 43 LCS_GDT S 10 S 10 13 17 43 12 13 13 13 15 16 21 25 30 33 36 36 37 39 40 40 41 42 43 43 LCS_GDT S 11 S 11 13 17 43 12 13 13 13 15 16 18 23 29 33 36 36 37 39 40 40 41 42 43 43 LCS_GDT Y 12 Y 12 13 17 43 12 13 13 13 15 16 18 23 29 33 36 36 37 39 40 40 41 42 43 43 LCS_GDT V 13 V 13 13 17 43 12 13 13 13 15 16 18 24 29 33 36 36 37 39 40 40 41 42 43 43 LCS_GDT A 14 A 14 13 17 43 12 13 13 13 15 16 16 18 20 24 28 35 36 39 40 40 41 42 43 43 LCS_GDT E 15 E 15 13 17 43 12 13 13 13 15 16 16 17 18 21 24 27 30 33 40 40 41 42 43 43 LCS_GDT T 16 T 16 13 17 43 12 13 13 13 15 16 16 17 19 22 24 27 36 39 40 40 41 42 43 43 LCS_GDT G 17 G 17 13 17 43 12 13 13 13 15 16 16 18 20 27 32 35 36 39 40 40 41 42 43 43 LCS_GDT Q 18 Q 18 13 17 43 12 13 13 13 15 16 21 25 30 33 36 36 37 39 40 40 41 42 43 43 LCS_GDT N 19 N 19 13 17 43 12 13 13 13 15 16 21 26 30 33 36 36 37 39 40 40 41 42 43 43 LCS_GDT W 20 W 20 12 17 43 11 11 12 13 17 23 24 27 28 32 36 36 37 39 40 40 41 42 43 43 LCS_GDT A 21 A 21 12 17 43 11 11 12 13 19 23 25 27 30 33 36 36 37 39 40 40 41 42 43 43 LCS_GDT S 22 S 22 12 23 43 11 11 12 17 20 23 25 27 30 33 36 36 37 39 40 40 41 42 43 43 LCS_GDT L 23 L 23 12 23 43 11 11 12 17 20 23 25 27 30 33 36 36 37 39 40 40 41 42 43 43 LCS_GDT A 24 A 24 12 23 43 11 11 12 17 20 23 25 27 30 33 36 36 37 39 40 40 41 42 43 43 LCS_GDT A 25 A 25 12 23 43 11 11 12 17 20 23 25 27 30 33 36 36 37 39 40 40 41 42 43 43 LCS_GDT N 26 N 26 12 23 43 11 11 12 17 20 23 25 27 30 33 36 36 37 39 40 40 41 42 43 43 LCS_GDT E 27 E 27 12 23 43 11 11 12 17 20 23 25 27 30 33 36 36 37 39 40 40 41 42 43 43 LCS_GDT L 28 L 28 12 23 43 11 11 12 17 20 23 25 27 30 33 36 36 37 39 40 40 41 42 43 43 LCS_GDT R 29 R 29 12 23 43 11 11 12 13 20 23 25 27 30 33 36 36 37 39 40 40 41 42 43 43 LCS_GDT V 30 V 30 12 23 43 11 11 12 13 17 23 25 27 30 33 36 36 37 39 40 40 41 42 43 43 LCS_GDT T 31 T 31 12 23 43 3 8 12 17 20 23 25 27 30 33 36 36 37 39 40 40 41 42 43 43 LCS_GDT E 32 E 32 5 23 43 3 5 12 17 20 23 25 27 30 33 36 36 37 39 40 40 41 42 43 43 LCS_GDT R 33 R 33 5 23 43 3 5 8 12 20 23 25 27 30 33 36 36 37 39 40 40 41 42 43 43 LCS_GDT P 34 P 34 5 23 43 3 4 5 7 11 21 23 25 28 31 32 35 37 39 40 40 41 42 43 43 LCS_GDT F 35 F 35 6 23 43 3 4 9 12 17 21 24 27 28 32 36 36 37 39 40 40 41 42 43 43 LCS_GDT W 36 W 36 9 23 43 5 9 12 17 20 23 25 27 30 33 36 36 37 39 40 40 41 42 43 43 LCS_GDT I 37 I 37 9 23 43 5 9 12 17 20 23 25 27 30 33 36 36 37 39 40 40 41 42 43 43 LCS_GDT S 38 S 38 9 23 43 5 9 12 17 20 23 25 27 30 33 36 36 37 39 40 40 41 42 43 43 LCS_GDT S 39 S 39 9 23 43 4 9 12 17 20 23 25 27 30 33 36 36 37 39 40 40 41 42 43 43 LCS_GDT F 40 F 40 9 23 43 6 9 12 17 20 23 25 27 30 33 36 36 37 39 40 40 41 42 43 43 LCS_GDT I 41 I 41 9 23 43 4 9 12 17 20 23 25 27 30 33 36 36 37 39 40 40 41 42 43 43 LCS_GDT G 42 G 42 9 23 43 6 9 12 17 20 23 25 27 30 33 36 36 37 39 40 40 41 42 43 43 LCS_GDT R 43 R 43 9 23 43 6 9 12 17 20 23 25 27 30 33 36 36 37 39 40 40 41 42 43 43 LCS_GDT S 44 S 44 9 23 43 0 9 12 17 20 23 25 27 28 32 36 36 37 37 39 40 41 42 43 43 LCS_GDT K 45 K 45 3 10 42 0 2 5 7 8 11 16 20 25 27 31 32 32 33 36 38 40 40 40 42 LCS_AVERAGE LCS_A: 54.29 ( 22.47 42.72 97.68 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 12 13 13 17 20 23 25 27 30 33 36 36 37 39 40 40 41 42 43 43 GDT PERCENT_AT 27.27 29.55 29.55 38.64 45.45 52.27 56.82 61.36 68.18 75.00 81.82 81.82 84.09 88.64 90.91 90.91 93.18 95.45 97.73 97.73 GDT RMS_LOCAL 0.32 0.40 0.40 1.27 1.53 1.89 2.03 2.24 2.94 3.31 3.53 3.53 3.65 4.26 4.47 4.34 4.55 4.74 4.91 4.91 GDT RMS_ALL_AT 13.91 13.85 13.85 6.97 7.05 6.31 6.36 6.41 5.51 5.31 5.37 5.37 5.38 5.27 5.32 5.24 5.17 5.22 5.18 5.18 # Checking swapping # possible swapping detected: F 35 F 35 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 10.559 0 0.119 0.158 11.348 0.000 0.000 - LGA V 3 V 3 10.772 0 0.643 1.308 14.575 0.000 0.000 11.463 LGA Q 4 Q 4 6.268 0 0.680 0.513 9.604 4.091 1.818 5.746 LGA G 5 G 5 2.707 0 0.512 0.512 7.077 11.364 11.364 - LGA P 6 P 6 5.401 0 0.033 0.088 6.338 2.727 1.558 6.338 LGA W 7 W 7 3.337 0 0.472 1.164 6.044 12.273 7.532 5.253 LGA V 8 V 8 3.672 0 0.063 0.078 6.137 17.727 10.390 5.830 LGA G 9 G 9 1.991 0 0.083 0.083 5.026 30.455 30.455 - LGA S 10 S 10 7.777 0 0.079 0.595 10.215 0.000 0.000 9.537 LGA S 11 S 11 9.256 0 0.022 0.655 11.320 0.000 0.000 10.668 LGA Y 12 Y 12 7.916 0 0.078 1.122 9.862 0.000 2.273 5.108 LGA V 13 V 13 9.680 0 0.017 0.057 13.253 0.000 0.000 11.870 LGA A 14 A 14 14.900 0 0.020 0.022 17.546 0.000 0.000 - LGA E 15 E 15 15.861 0 0.088 0.880 17.876 0.000 0.000 17.876 LGA T 16 T 16 13.723 0 0.091 0.115 14.536 0.000 0.000 9.577 LGA G 17 G 17 14.020 0 0.035 0.035 14.020 0.000 0.000 - LGA Q 18 Q 18 8.141 0 0.081 0.280 10.998 0.000 0.000 7.292 LGA N 19 N 19 6.538 0 0.613 1.404 12.857 2.727 1.364 11.705 LGA W 20 W 20 4.473 0 0.611 1.313 15.204 7.273 2.078 15.204 LGA A 21 A 21 3.325 0 0.013 0.018 3.668 23.636 22.545 - LGA S 22 S 22 1.477 0 0.041 0.116 2.198 55.000 51.515 2.130 LGA L 23 L 23 2.721 0 0.066 1.426 8.094 38.636 20.000 5.331 LGA A 24 A 24 2.764 0 0.013 0.017 3.571 35.909 30.909 - LGA A 25 A 25 1.577 0 0.029 0.029 1.789 54.545 56.727 - LGA N 26 N 26 1.194 0 0.009 0.090 2.774 70.455 54.545 2.225 LGA E 27 E 27 0.350 0 0.038 0.176 2.869 86.818 64.444 2.869 LGA L 28 L 28 2.196 0 0.071 0.077 3.919 35.455 27.045 3.919 LGA R 29 R 29 2.994 0 0.076 1.365 9.481 22.273 10.579 9.481 LGA V 30 V 30 3.575 0 0.201 1.162 5.505 23.636 17.662 5.505 LGA T 31 T 31 1.960 0 0.255 0.245 4.036 59.091 39.740 3.311 LGA E 32 E 32 1.880 0 0.037 0.807 3.297 50.909 36.970 3.297 LGA R 33 R 33 2.842 0 0.047 1.380 13.137 14.091 5.289 13.137 LGA P 34 P 34 5.108 0 0.406 0.585 6.687 0.455 0.260 6.428 LGA F 35 F 35 3.887 0 0.576 1.399 9.747 18.636 6.942 9.747 LGA W 36 W 36 0.909 0 0.265 0.223 2.774 74.091 56.364 2.581 LGA I 37 I 37 1.353 0 0.073 0.967 3.081 65.455 52.955 3.081 LGA S 38 S 38 1.112 0 0.030 0.063 1.140 65.455 70.909 0.935 LGA S 39 S 39 1.025 0 0.039 0.053 1.160 65.455 65.455 1.160 LGA F 40 F 40 1.139 0 0.014 0.803 4.532 73.636 44.132 3.713 LGA I 41 I 41 0.420 0 0.015 0.063 1.011 100.000 86.818 1.002 LGA G 42 G 42 0.186 0 0.133 0.133 0.714 95.455 95.455 - LGA R 43 R 43 0.305 0 0.020 1.089 4.751 95.455 63.140 4.751 LGA S 44 S 44 1.923 0 0.032 0.666 4.363 41.818 33.333 4.363 LGA K 45 K 45 7.852 0 0.622 0.727 19.227 0.000 0.000 19.227 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 5.155 5.155 6.229 30.795 24.604 12.208 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 27 2.24 55.114 54.270 1.153 LGA_LOCAL RMSD: 2.241 Number of atoms: 27 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 6.412 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 5.155 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.129612 * X + 0.382896 * Y + 0.914654 * Z + 9.706450 Y_new = -0.906070 * X + -0.420442 * Y + 0.047611 * Z + 45.555763 Z_new = 0.402789 * X + -0.822569 * Y + 0.401425 * Z + 4.501777 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.712881 -0.414562 -1.116784 [DEG: -98.1409 -23.7526 -63.9870 ] ZXZ: 1.622803 1.157724 2.686242 [DEG: 92.9798 66.3327 153.9103 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS043_2-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS043_2-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 27 2.24 54.270 5.16 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS043_2-D1 PFRMAT TS TARGET T0953s2 MODEL 2 PARENT N/A ATOM 20 N ALA 2 10.128 41.927 4.671 1.00 16.78 N ATOM 21 CA ALA 2 10.560 40.787 3.870 1.00 16.78 C ATOM 22 C ALA 2 9.565 40.490 2.756 1.00 16.78 C ATOM 23 O ALA 2 8.369 40.341 3.002 1.00 16.78 O ATOM 24 CB ALA 2 10.748 39.562 4.752 1.00 16.78 C ATOM 30 N VAL 3 10.068 40.403 1.529 1.00 17.34 N ATOM 31 CA VAL 3 9.223 40.130 0.372 1.00 17.34 C ATOM 32 C VAL 3 8.631 38.729 0.441 1.00 17.34 C ATOM 33 O VAL 3 7.590 38.454 -0.157 1.00 17.34 O ATOM 34 CB VAL 3 10.034 40.278 -0.928 1.00 17.34 C ATOM 35 CG1 VAL 3 10.977 39.097 -1.106 1.00 17.34 C ATOM 36 CG2 VAL 3 9.091 40.400 -2.116 1.00 17.34 C ATOM 46 N GLN 4 9.299 37.845 1.174 1.00 16.09 N ATOM 47 CA GLN 4 8.838 36.469 1.323 1.00 16.09 C ATOM 48 C GLN 4 7.767 36.361 2.400 1.00 16.09 C ATOM 49 O GLN 4 7.114 35.326 2.538 1.00 16.09 O ATOM 50 CB GLN 4 10.012 35.545 1.658 1.00 16.09 C ATOM 51 CG GLN 4 11.047 35.426 0.552 1.00 16.09 C ATOM 52 CD GLN 4 12.221 34.552 0.949 1.00 16.09 C ATOM 53 OE1 GLN 4 12.506 34.375 2.136 1.00 16.09 O ATOM 54 NE2 GLN 4 12.910 34.002 -0.043 1.00 16.09 N ATOM 63 N GLY 5 7.590 37.435 3.162 1.00 14.99 N ATOM 64 CA GLY 5 6.602 37.459 4.234 1.00 14.99 C ATOM 65 C GLY 5 5.222 37.069 3.720 1.00 14.99 C ATOM 66 O GLY 5 4.654 36.061 4.143 1.00 14.99 O ATOM 70 N PRO 6 4.688 37.872 2.808 1.00 14.75 N ATOM 71 CA PRO 6 3.339 37.661 2.298 1.00 14.75 C ATOM 72 C PRO 6 3.287 36.463 1.358 1.00 14.75 C ATOM 73 O PRO 6 2.212 35.943 1.059 1.00 14.75 O ATOM 74 CB PRO 6 3.040 38.971 1.561 1.00 14.75 C ATOM 75 CG PRO 6 4.382 39.477 1.156 1.00 14.75 C ATOM 76 CD PRO 6 5.279 39.129 2.314 1.00 14.75 C ATOM 84 N TRP 7 4.454 36.030 0.893 1.00 14.70 N ATOM 85 CA TRP 7 4.558 34.820 0.088 1.00 14.70 C ATOM 86 C TRP 7 4.330 33.574 0.935 1.00 14.70 C ATOM 87 O TRP 7 3.665 32.633 0.504 1.00 14.70 O ATOM 88 CB TRP 7 5.931 34.741 -0.582 1.00 14.70 C ATOM 89 CG TRP 7 6.135 35.771 -1.652 1.00 14.70 C ATOM 90 CD1 TRP 7 5.200 36.633 -2.142 1.00 14.70 C ATOM 91 CD2 TRP 7 7.359 36.055 -2.371 1.00 14.70 C ATOM 92 NE1 TRP 7 5.754 37.428 -3.114 1.00 14.70 N ATOM 93 CE2 TRP 7 7.075 37.090 -3.266 1.00 14.70 C ATOM 94 CE3 TRP 7 8.654 35.522 -2.327 1.00 14.70 C ATOM 95 CZ2 TRP 7 8.038 37.608 -4.118 1.00 14.70 C ATOM 96 CZ3 TRP 7 9.619 36.042 -3.181 1.00 14.70 C ATOM 97 CH2 TRP 7 9.319 37.059 -4.052 1.00 14.70 C ATOM 108 N VAL 8 4.886 33.576 2.142 1.00 12.61 N ATOM 109 CA VAL 8 4.622 32.516 3.108 1.00 12.61 C ATOM 110 C VAL 8 3.183 32.569 3.605 1.00 12.61 C ATOM 111 O VAL 8 2.521 31.539 3.731 1.00 12.61 O ATOM 112 CB VAL 8 5.581 32.634 4.306 1.00 12.61 C ATOM 113 CG1 VAL 8 5.169 31.679 5.416 1.00 12.61 C ATOM 114 CG2 VAL 8 7.008 32.356 3.858 1.00 12.61 C ATOM 124 N GLY 9 2.704 33.776 3.887 1.00 12.21 N ATOM 125 CA GLY 9 1.326 33.972 4.320 1.00 12.21 C ATOM 126 C GLY 9 0.343 33.466 3.271 1.00 12.21 C ATOM 127 O GLY 9 -0.615 32.764 3.593 1.00 12.21 O ATOM 131 N SER 10 0.587 33.827 2.016 1.00 14.12 N ATOM 132 CA SER 10 -0.254 33.378 0.913 1.00 14.12 C ATOM 133 C SER 10 -0.180 31.866 0.743 1.00 14.12 C ATOM 134 O SER 10 -1.191 31.209 0.500 1.00 14.12 O ATOM 135 CB SER 10 0.165 34.062 -0.374 1.00 14.12 C ATOM 136 OG SER 10 -0.063 35.443 -0.306 1.00 14.12 O ATOM 142 N SER 11 1.025 31.321 0.872 1.00 14.89 N ATOM 143 CA SER 11 1.227 29.880 0.778 1.00 14.89 C ATOM 144 C SER 11 0.478 29.145 1.882 1.00 14.89 C ATOM 145 O SER 11 -0.106 28.087 1.652 1.00 14.89 O ATOM 146 CB SER 11 2.706 29.554 0.855 1.00 14.89 C ATOM 147 OG SER 11 3.391 30.064 -0.256 1.00 14.89 O ATOM 153 N TYR 12 0.498 29.714 3.083 1.00 12.79 N ATOM 154 CA TYR 12 -0.225 29.143 4.213 1.00 12.79 C ATOM 155 C TYR 12 -1.721 29.072 3.930 1.00 12.79 C ATOM 156 O TYR 12 -2.357 28.045 4.165 1.00 12.79 O ATOM 157 CB TYR 12 0.036 29.958 5.482 1.00 12.79 C ATOM 158 CG TYR 12 -0.663 29.416 6.710 1.00 12.79 C ATOM 159 CD1 TYR 12 -0.120 28.341 7.398 1.00 12.79 C ATOM 160 CD2 TYR 12 -1.844 29.995 7.147 1.00 12.79 C ATOM 161 CE1 TYR 12 -0.758 27.846 8.520 1.00 12.79 C ATOM 162 CE2 TYR 12 -2.482 29.501 8.268 1.00 12.79 C ATOM 163 CZ TYR 12 -1.943 28.431 8.953 1.00 12.79 C ATOM 164 OH TYR 12 -2.578 27.938 10.069 1.00 12.79 O ATOM 174 N VAL 13 -2.275 30.168 3.424 1.00 12.58 N ATOM 175 CA VAL 13 -3.680 30.208 3.039 1.00 12.58 C ATOM 176 C VAL 13 -3.985 29.177 1.961 1.00 12.58 C ATOM 177 O VAL 13 -4.968 28.442 2.050 1.00 12.58 O ATOM 178 CB VAL 13 -4.053 31.611 2.524 1.00 12.58 C ATOM 179 CG1 VAL 13 -5.449 31.602 1.918 1.00 12.58 C ATOM 180 CG2 VAL 13 -3.966 32.620 3.660 1.00 12.58 C ATOM 190 N ALA 14 -3.136 29.127 0.940 1.00 14.64 N ATOM 191 CA ALA 14 -3.323 28.198 -0.168 1.00 14.64 C ATOM 192 C ALA 14 -3.217 26.752 0.301 1.00 14.64 C ATOM 193 O ALA 14 -3.951 25.883 -0.169 1.00 14.64 O ATOM 194 CB ALA 14 -2.307 28.473 -1.268 1.00 14.64 C ATOM 200 N GLU 15 -2.299 26.503 1.229 1.00 15.02 N ATOM 201 CA GLU 15 -2.016 25.145 1.680 1.00 15.02 C ATOM 202 C GLU 15 -3.062 24.667 2.678 1.00 15.02 C ATOM 203 O GLU 15 -3.671 23.613 2.497 1.00 15.02 O ATOM 204 CB GLU 15 -0.623 25.073 2.311 1.00 15.02 C ATOM 205 CG GLU 15 -0.218 23.684 2.782 1.00 15.02 C ATOM 206 CD GLU 15 1.185 23.635 3.321 1.00 15.02 C ATOM 207 OE1 GLU 15 1.841 24.648 3.308 1.00 15.02 O ATOM 208 OE2 GLU 15 1.599 22.582 3.747 1.00 15.02 O ATOM 215 N THR 16 -3.265 25.448 3.734 1.00 14.26 N ATOM 216 CA THR 16 -4.109 25.028 4.846 1.00 14.26 C ATOM 217 C THR 16 -5.534 25.541 4.681 1.00 14.26 C ATOM 218 O THR 16 -6.491 24.893 5.103 1.00 14.26 O ATOM 219 CB THR 16 -3.537 25.513 6.190 1.00 14.26 C ATOM 220 OG1 THR 16 -3.551 26.946 6.229 1.00 14.26 O ATOM 221 CG2 THR 16 -2.110 25.019 6.373 1.00 14.26 C ATOM 229 N GLY 17 -5.668 26.710 4.065 1.00 14.84 N ATOM 230 CA GLY 17 -6.971 27.344 3.899 1.00 14.84 C ATOM 231 C GLY 17 -7.278 28.284 5.058 1.00 14.84 C ATOM 232 O GLY 17 -8.350 28.886 5.113 1.00 14.84 O ATOM 236 N GLN 18 -6.332 28.404 5.982 1.00 13.32 N ATOM 237 CA GLN 18 -6.515 29.241 7.161 1.00 13.32 C ATOM 238 C GLN 18 -5.833 30.592 6.989 1.00 13.32 C ATOM 239 O GLN 18 -4.928 30.741 6.167 1.00 13.32 O ATOM 240 CB GLN 18 -5.971 28.538 8.408 1.00 13.32 C ATOM 241 CG GLN 18 -6.620 27.194 8.697 1.00 13.32 C ATOM 242 CD GLN 18 -8.106 27.317 8.977 1.00 13.32 C ATOM 243 OE1 GLN 18 -8.524 28.070 9.861 1.00 13.32 O ATOM 244 NE2 GLN 18 -8.912 26.576 8.226 1.00 13.32 N ATOM 253 N ASN 19 -6.271 31.575 7.767 1.00 12.03 N ATOM 254 CA ASN 19 -5.740 32.928 7.666 1.00 12.03 C ATOM 255 C ASN 19 -4.442 33.071 8.451 1.00 12.03 C ATOM 256 O ASN 19 -4.443 33.046 9.682 1.00 12.03 O ATOM 257 CB ASN 19 -6.764 33.941 8.141 1.00 12.03 C ATOM 258 CG ASN 19 -6.278 35.359 8.015 1.00 12.03 C ATOM 259 OD1 ASN 19 -5.098 35.646 8.250 1.00 12.03 O ATOM 260 ND2 ASN 19 -7.163 36.251 7.649 1.00 12.03 N ATOM 267 N TRP 20 -3.335 33.220 7.732 1.00 10.07 N ATOM 268 CA TRP 20 -2.019 33.298 8.357 1.00 10.07 C ATOM 269 C TRP 20 -1.942 34.465 9.333 1.00 10.07 C ATOM 270 O TRP 20 -1.393 34.335 10.428 1.00 10.07 O ATOM 271 CB TRP 20 -0.931 33.446 7.292 1.00 10.07 C ATOM 272 CG TRP 20 0.451 33.561 7.861 1.00 10.07 C ATOM 273 CD1 TRP 20 1.325 32.542 8.092 1.00 10.07 C ATOM 274 CD2 TRP 20 1.128 34.772 8.274 1.00 10.07 C ATOM 275 NE1 TRP 20 2.494 33.031 8.621 1.00 10.07 N ATOM 276 CE2 TRP 20 2.392 34.395 8.738 1.00 10.07 C ATOM 277 CE3 TRP 20 0.770 36.126 8.289 1.00 10.07 C ATOM 278 CZ2 TRP 20 3.306 35.321 9.214 1.00 10.07 C ATOM 279 CZ3 TRP 20 1.687 37.055 8.766 1.00 10.07 C ATOM 280 CH2 TRP 20 2.922 36.662 9.215 1.00 10.07 C ATOM 291 N ALA 21 -2.494 35.604 8.931 1.00 9.51 N ATOM 292 CA ALA 21 -2.416 36.819 9.734 1.00 9.51 C ATOM 293 C ALA 21 -3.126 36.642 11.071 1.00 9.51 C ATOM 294 O ALA 21 -2.690 37.174 12.091 1.00 9.51 O ATOM 295 CB ALA 21 -3.009 37.996 8.973 1.00 9.51 C ATOM 301 N SER 22 -4.222 35.890 11.058 1.00 10.35 N ATOM 302 CA SER 22 -4.965 35.599 12.277 1.00 10.35 C ATOM 303 C SER 22 -4.191 34.646 13.180 1.00 10.35 C ATOM 304 O SER 22 -4.273 34.733 14.405 1.00 10.35 O ATOM 305 CB SER 22 -6.316 35.000 11.936 1.00 10.35 C ATOM 306 OG SER 22 -6.177 33.695 11.443 1.00 10.35 O ATOM 312 N LEU 23 -3.440 33.737 12.567 1.00 9.59 N ATOM 313 CA LEU 23 -2.528 32.873 13.306 1.00 9.59 C ATOM 314 C LEU 23 -1.415 33.680 13.962 1.00 9.59 C ATOM 315 O LEU 23 -1.115 33.496 15.141 1.00 9.59 O ATOM 316 CB LEU 23 -1.920 31.821 12.370 1.00 9.59 C ATOM 317 CG LEU 23 -0.879 30.889 13.002 1.00 9.59 C ATOM 318 CD1 LEU 23 -1.522 30.108 14.141 1.00 9.59 C ATOM 319 CD2 LEU 23 -0.324 29.951 11.941 1.00 9.59 C ATOM 331 N ALA 24 -0.806 34.575 13.191 1.00 7.71 N ATOM 332 CA ALA 24 0.234 35.454 13.712 1.00 7.71 C ATOM 333 C ALA 24 -0.280 36.279 14.885 1.00 7.71 C ATOM 334 O ALA 24 0.415 36.451 15.887 1.00 7.71 O ATOM 335 CB ALA 24 0.757 36.365 12.612 1.00 7.71 C ATOM 341 N ALA 25 -1.500 36.789 14.754 1.00 8.15 N ATOM 342 CA ALA 25 -2.131 37.552 15.824 1.00 8.15 C ATOM 343 C ALA 25 -2.312 36.700 17.074 1.00 8.15 C ATOM 344 O ALA 25 -2.093 37.166 18.192 1.00 8.15 O ATOM 345 CB ALA 25 -3.472 38.104 15.362 1.00 8.15 C ATOM 351 N ASN 26 -2.713 35.448 16.878 1.00 8.85 N ATOM 352 CA ASN 26 -2.890 34.518 17.987 1.00 8.85 C ATOM 353 C ASN 26 -1.564 34.226 18.677 1.00 8.85 C ATOM 354 O ASN 26 -1.506 34.092 19.899 1.00 8.85 O ATOM 355 CB ASN 26 -3.537 33.232 17.507 1.00 8.85 C ATOM 356 CG ASN 26 -4.999 33.401 17.198 1.00 8.85 C ATOM 357 OD1 ASN 26 -5.650 34.325 17.701 1.00 8.85 O ATOM 358 ND2 ASN 26 -5.528 32.527 16.380 1.00 8.85 N ATOM 365 N GLU 27 -0.500 34.128 17.888 1.00 7.80 N ATOM 366 CA GLU 27 0.830 33.863 18.422 1.00 7.80 C ATOM 367 C GLU 27 1.380 35.079 19.157 1.00 7.80 C ATOM 368 O GLU 27 2.111 34.946 20.138 1.00 7.80 O ATOM 369 CB GLU 27 1.787 33.458 17.298 1.00 7.80 C ATOM 370 CG GLU 27 1.506 32.088 16.698 1.00 7.80 C ATOM 371 CD GLU 27 1.643 30.972 17.697 1.00 7.80 C ATOM 372 OE1 GLU 27 2.542 31.027 18.501 1.00 7.80 O ATOM 373 OE2 GLU 27 0.846 30.064 17.655 1.00 7.80 O ATOM 380 N LEU 28 1.025 36.265 18.676 1.00 6.87 N ATOM 381 CA LEU 28 1.453 37.508 19.306 1.00 6.87 C ATOM 382 C LEU 28 0.519 37.900 20.444 1.00 6.87 C ATOM 383 O LEU 28 0.790 38.843 21.186 1.00 6.87 O ATOM 384 CB LEU 28 1.508 38.637 18.270 1.00 6.87 C ATOM 385 CG LEU 28 2.530 38.454 17.140 1.00 6.87 C ATOM 386 CD1 LEU 28 2.404 39.605 16.151 1.00 6.87 C ATOM 387 CD2 LEU 28 3.932 38.390 17.729 1.00 6.87 C ATOM 399 N ARG 29 -0.582 37.168 20.576 1.00 8.31 N ATOM 400 CA ARG 29 -1.566 37.446 21.615 1.00 8.31 C ATOM 401 C ARG 29 -2.170 38.834 21.444 1.00 8.31 C ATOM 402 O ARG 29 -2.308 39.585 22.411 1.00 8.31 O ATOM 403 CB ARG 29 -0.934 37.338 22.995 1.00 8.31 C ATOM 404 CG ARG 29 -0.868 35.927 23.559 1.00 8.31 C ATOM 405 CD ARG 29 0.209 35.129 22.918 1.00 8.31 C ATOM 406 NE ARG 29 0.381 33.836 23.560 1.00 8.31 N ATOM 407 CZ ARG 29 1.200 32.863 23.115 1.00 8.31 C ATOM 408 NH1 ARG 29 1.913 33.052 22.026 1.00 8.31 N ATOM 409 NH2 ARG 29 1.288 31.720 23.773 1.00 8.31 N ATOM 423 N VAL 30 -2.528 39.171 20.210 1.00 11.75 N ATOM 424 CA VAL 30 -3.119 40.469 19.911 1.00 11.75 C ATOM 425 C VAL 30 -4.435 40.316 19.159 1.00 11.75 C ATOM 426 O VAL 30 -4.745 39.242 18.643 1.00 11.75 O ATOM 427 CB VAL 30 -2.147 41.318 19.071 1.00 11.75 C ATOM 428 CG1 VAL 30 -0.854 41.559 19.835 1.00 11.75 C ATOM 429 CG2 VAL 30 -1.868 40.626 17.745 1.00 11.75 C ATOM 439 N THR 31 -5.205 41.397 19.097 1.00 14.39 N ATOM 440 CA THR 31 -6.464 41.400 18.362 1.00 14.39 C ATOM 441 C THR 31 -6.367 42.259 17.108 1.00 14.39 C ATOM 442 O THR 31 -7.333 42.915 16.717 1.00 14.39 O ATOM 443 CB THR 31 -7.621 41.903 19.245 1.00 14.39 C ATOM 444 OG1 THR 31 -7.318 43.216 19.732 1.00 14.39 O ATOM 445 CG2 THR 31 -7.838 40.966 20.424 1.00 14.39 C ATOM 453 N GLU 32 -5.196 42.252 16.480 1.00 17.01 N ATOM 454 CA GLU 32 -4.950 43.080 15.307 1.00 17.01 C ATOM 455 C GLU 32 -5.629 42.500 14.073 1.00 17.01 C ATOM 456 O GLU 32 -5.782 41.285 13.949 1.00 17.01 O ATOM 457 CB GLU 32 -3.447 43.218 15.056 1.00 17.01 C ATOM 458 CG GLU 32 -2.691 43.948 16.157 1.00 17.01 C ATOM 459 CD GLU 32 -1.207 43.994 15.916 1.00 17.01 C ATOM 460 OE1 GLU 32 -0.794 43.710 14.818 1.00 17.01 O ATOM 461 OE2 GLU 32 -0.486 44.314 16.832 1.00 17.01 O ATOM 468 N ARG 33 -6.035 43.378 13.159 1.00 18.13 N ATOM 469 CA ARG 33 -6.713 42.956 11.941 1.00 18.13 C ATOM 470 C ARG 33 -5.922 41.874 11.216 1.00 18.13 C ATOM 471 O ARG 33 -4.762 42.074 10.858 1.00 18.13 O ATOM 472 CB ARG 33 -6.922 44.139 11.007 1.00 18.13 C ATOM 473 CG ARG 33 -7.675 43.818 9.726 1.00 18.13 C ATOM 474 CD ARG 33 -7.824 45.016 8.862 1.00 18.13 C ATOM 475 NE ARG 33 -8.439 44.691 7.584 1.00 18.13 N ATOM 476 CZ ARG 33 -8.661 45.578 6.595 1.00 18.13 C ATOM 477 NH1 ARG 33 -8.315 46.837 6.749 1.00 18.13 N ATOM 478 NH2 ARG 33 -9.229 45.182 5.468 1.00 18.13 N ATOM 492 N PRO 34 -6.558 40.727 11.002 1.00 17.13 N ATOM 493 CA PRO 34 -5.921 39.616 10.304 1.00 17.13 C ATOM 494 C PRO 34 -5.875 39.862 8.801 1.00 17.13 C ATOM 495 O PRO 34 -6.556 39.185 8.031 1.00 17.13 O ATOM 496 CB PRO 34 -6.820 38.427 10.655 1.00 17.13 C ATOM 497 CG PRO 34 -8.178 39.025 10.799 1.00 17.13 C ATOM 498 CD PRO 34 -7.932 40.357 11.457 1.00 17.13 C ATOM 506 N PHE 35 -5.070 40.836 8.390 1.00 16.48 N ATOM 507 CA PHE 35 -4.996 41.227 6.988 1.00 16.48 C ATOM 508 C PHE 35 -3.627 41.804 6.649 1.00 16.48 C ATOM 509 O PHE 35 -2.999 41.404 5.668 1.00 16.48 O ATOM 510 CB PHE 35 -6.082 42.254 6.661 1.00 16.48 C ATOM 511 CG PHE 35 -6.022 42.772 5.253 1.00 16.48 C ATOM 512 CD1 PHE 35 -6.457 41.992 4.191 1.00 16.48 C ATOM 513 CD2 PHE 35 -5.530 44.041 4.985 1.00 16.48 C ATOM 514 CE1 PHE 35 -6.401 42.468 2.895 1.00 16.48 C ATOM 515 CE2 PHE 35 -5.475 44.521 3.691 1.00 16.48 C ATOM 516 CZ PHE 35 -5.910 43.733 2.645 1.00 16.48 C ATOM 526 N TRP 36 -3.169 42.747 7.466 1.00 15.00 N ATOM 527 CA TRP 36 -1.926 43.459 7.194 1.00 15.00 C ATOM 528 C TRP 36 -0.713 42.604 7.541 1.00 15.00 C ATOM 529 O TRP 36 -0.081 42.801 8.579 1.00 15.00 O ATOM 530 CB TRP 36 -1.877 44.767 7.985 1.00 15.00 C ATOM 531 CG TRP 36 -2.943 45.743 7.594 1.00 15.00 C ATOM 532 CD1 TRP 36 -4.021 46.117 8.340 1.00 15.00 C ATOM 533 CD2 TRP 36 -3.041 46.482 6.352 1.00 15.00 C ATOM 534 NE1 TRP 36 -4.780 47.031 7.652 1.00 15.00 N ATOM 535 CE2 TRP 36 -4.194 47.267 6.434 1.00 15.00 C ATOM 536 CE3 TRP 36 -2.254 46.540 5.196 1.00 15.00 C ATOM 537 CZ2 TRP 36 -4.587 48.104 5.401 1.00 15.00 C ATOM 538 CZ3 TRP 36 -2.647 47.380 4.160 1.00 15.00 C ATOM 539 CH2 TRP 36 -3.783 48.142 4.262 1.00 15.00 C ATOM 550 N ILE 37 -0.395 41.655 6.668 1.00 13.29 N ATOM 551 CA ILE 37 0.742 40.768 6.881 1.00 13.29 C ATOM 552 C ILE 37 2.013 41.561 7.159 1.00 13.29 C ATOM 553 O ILE 37 2.825 41.175 8.000 1.00 13.29 O ATOM 554 CB ILE 37 0.963 39.855 5.662 1.00 13.29 C ATOM 555 CG1 ILE 37 -0.171 38.832 5.549 1.00 13.29 C ATOM 556 CG2 ILE 37 2.308 39.153 5.759 1.00 13.29 C ATOM 557 CD1 ILE 37 -0.177 38.067 4.246 1.00 13.29 C ATOM 569 N SER 38 2.182 42.670 6.447 1.00 12.76 N ATOM 570 CA SER 38 3.399 43.466 6.545 1.00 12.76 C ATOM 571 C SER 38 3.594 44.003 7.956 1.00 12.76 C ATOM 572 O SER 38 4.717 44.289 8.373 1.00 12.76 O ATOM 573 CB SER 38 3.351 44.617 5.558 1.00 12.76 C ATOM 574 OG SER 38 2.354 45.537 5.910 1.00 12.76 O ATOM 580 N SER 39 2.494 44.138 8.689 1.00 10.16 N ATOM 581 CA SER 39 2.542 44.649 10.055 1.00 10.16 C ATOM 582 C SER 39 2.936 43.555 11.038 1.00 10.16 C ATOM 583 O SER 39 3.324 43.837 12.173 1.00 10.16 O ATOM 584 CB SER 39 1.195 45.229 10.442 1.00 10.16 C ATOM 585 OG SER 39 0.236 44.217 10.587 1.00 10.16 O ATOM 591 N PHE 40 2.835 42.306 10.599 1.00 7.56 N ATOM 592 CA PHE 40 3.205 41.168 11.432 1.00 7.56 C ATOM 593 C PHE 40 4.660 40.775 11.213 1.00 7.56 C ATOM 594 O PHE 40 5.304 40.221 12.105 1.00 7.56 O ATOM 595 CB PHE 40 2.299 39.971 11.134 1.00 7.56 C ATOM 596 CG PHE 40 0.883 40.151 11.605 1.00 7.56 C ATOM 597 CD1 PHE 40 -0.124 40.474 10.709 1.00 7.56 C ATOM 598 CD2 PHE 40 0.558 39.999 12.945 1.00 7.56 C ATOM 599 CE1 PHE 40 -1.427 40.639 11.141 1.00 7.56 C ATOM 600 CE2 PHE 40 -0.743 40.163 13.379 1.00 7.56 C ATOM 601 CZ PHE 40 -1.737 40.484 12.475 1.00 7.56 C ATOM 611 N ILE 41 5.175 41.066 10.024 1.00 8.15 N ATOM 612 CA ILE 41 6.556 40.742 9.686 1.00 8.15 C ATOM 613 C ILE 41 7.530 41.428 10.635 1.00 8.15 C ATOM 614 O ILE 41 7.481 42.644 10.820 1.00 8.15 O ATOM 615 CB ILE 41 6.876 41.151 8.237 1.00 8.15 C ATOM 616 CG1 ILE 41 6.032 40.338 7.253 1.00 8.15 C ATOM 617 CG2 ILE 41 8.359 40.969 7.948 1.00 8.15 C ATOM 618 CD1 ILE 41 6.145 40.805 5.819 1.00 8.15 C ATOM 630 N GLY 42 8.415 40.639 11.235 1.00 5.89 N ATOM 631 CA GLY 42 9.385 41.164 12.189 1.00 5.89 C ATOM 632 C GLY 42 9.085 40.682 13.603 1.00 5.89 C ATOM 633 O GLY 42 9.991 40.536 14.424 1.00 5.89 O ATOM 637 N ARG 43 7.810 40.438 13.880 1.00 4.46 N ATOM 638 CA ARG 43 7.393 39.925 15.180 1.00 4.46 C ATOM 639 C ARG 43 7.191 38.416 15.138 1.00 4.46 C ATOM 640 O ARG 43 6.815 37.859 14.107 1.00 4.46 O ATOM 641 CB ARG 43 6.103 40.593 15.631 1.00 4.46 C ATOM 642 CG ARG 43 6.237 42.063 15.996 1.00 4.46 C ATOM 643 CD ARG 43 4.947 42.635 16.462 1.00 4.46 C ATOM 644 NE ARG 43 4.013 42.828 15.364 1.00 4.46 N ATOM 645 CZ ARG 43 2.729 43.209 15.511 1.00 4.46 C ATOM 646 NH1 ARG 43 2.243 43.434 16.712 1.00 4.46 N ATOM 647 NH2 ARG 43 1.958 43.358 14.448 1.00 4.46 N ATOM 661 N SER 44 7.444 37.759 16.265 1.00 4.36 N ATOM 662 CA SER 44 7.788 38.456 17.498 1.00 4.36 C ATOM 663 C SER 44 9.287 38.706 17.589 1.00 4.36 C ATOM 664 O SER 44 10.089 37.931 17.067 1.00 4.36 O ATOM 665 CB SER 44 7.326 37.653 18.699 1.00 4.36 C ATOM 666 OG SER 44 7.743 38.253 19.894 1.00 4.36 O ATOM 672 N LYS 45 9.662 39.794 18.255 1.00 3.40 N ATOM 673 CA LYS 45 11.065 40.079 18.531 1.00 3.40 C ATOM 674 C LYS 45 11.442 39.665 19.948 1.00 3.40 C ATOM 675 O LYS 45 12.507 40.027 20.447 1.00 3.40 O ATOM 676 CB LYS 45 11.362 41.564 18.321 1.00 3.40 C ATOM 677 CG LYS 45 11.215 42.037 16.880 1.00 3.40 C ATOM 678 CD LYS 45 11.558 43.512 16.745 1.00 3.40 C ATOM 679 CE LYS 45 11.436 43.981 15.303 1.00 3.40 C ATOM 680 NZ LYS 45 11.723 45.434 15.163 1.00 3.40 N TER END