####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS041_5-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS041_5-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 18 17 - 34 4.86 21.64 LONGEST_CONTINUOUS_SEGMENT: 18 18 - 35 4.77 21.61 LCS_AVERAGE: 36.73 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 19 - 29 1.76 23.78 LCS_AVERAGE: 18.39 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 20 - 29 0.57 24.34 LCS_AVERAGE: 12.96 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 3 12 3 3 3 3 3 5 5 6 9 10 10 11 14 14 15 15 16 16 17 18 LCS_GDT V 3 V 3 3 7 12 3 3 3 4 7 7 7 8 9 10 10 11 14 14 14 15 16 16 17 18 LCS_GDT Q 4 Q 4 4 7 15 3 3 4 6 7 7 7 8 9 10 10 11 14 14 15 15 16 17 17 18 LCS_GDT G 5 G 5 4 7 15 0 3 4 6 7 7 7 8 12 12 13 14 14 14 15 15 16 17 18 18 LCS_GDT P 6 P 6 4 7 15 1 4 5 6 7 7 7 8 12 12 13 14 14 14 15 15 16 17 18 19 LCS_GDT W 7 W 7 4 7 15 3 4 5 6 7 7 7 8 12 12 13 14 14 14 15 15 16 17 18 19 LCS_GDT V 8 V 8 4 7 15 3 4 4 6 7 7 7 8 12 12 13 14 14 14 15 15 16 17 18 18 LCS_GDT G 9 G 9 4 7 15 3 4 5 6 7 7 7 8 12 12 13 14 14 14 15 15 16 17 18 18 LCS_GDT S 10 S 10 3 6 15 3 4 5 5 6 6 7 8 12 12 13 14 14 14 15 15 16 17 18 19 LCS_GDT S 11 S 11 3 6 15 3 4 5 5 6 6 6 8 12 12 13 14 14 14 15 15 16 17 18 19 LCS_GDT Y 12 Y 12 3 4 15 1 3 3 4 4 5 6 8 12 12 13 14 14 14 15 15 16 17 18 19 LCS_GDT V 13 V 13 4 5 15 3 4 4 5 5 5 6 8 12 12 13 14 14 14 15 16 19 21 22 22 LCS_GDT A 14 A 14 4 5 15 3 4 4 5 5 6 7 8 12 12 13 14 14 16 18 20 20 22 23 23 LCS_GDT E 15 E 15 4 5 15 3 4 4 5 5 6 7 8 8 11 13 14 14 16 18 20 20 22 23 23 LCS_GDT T 16 T 16 6 6 15 3 5 6 6 6 6 7 8 12 12 13 14 14 14 15 16 20 22 23 23 LCS_GDT G 17 G 17 6 6 18 3 5 6 6 6 6 7 8 12 12 13 14 14 16 18 20 20 22 23 23 LCS_GDT Q 18 Q 18 6 6 18 3 5 6 6 6 6 7 8 12 13 14 16 16 17 18 20 20 22 23 23 LCS_GDT N 19 N 19 6 11 18 3 5 6 6 9 10 12 14 15 15 15 16 16 17 18 20 20 22 23 23 LCS_GDT W 20 W 20 10 11 18 7 10 10 10 10 11 12 14 15 15 15 16 16 17 17 20 20 22 23 23 LCS_GDT A 21 A 21 10 11 18 7 10 10 10 10 11 12 13 15 15 15 16 16 17 18 20 20 21 23 23 LCS_GDT S 22 S 22 10 11 18 7 10 10 10 10 11 12 14 15 15 15 16 16 17 18 20 20 22 23 23 LCS_GDT L 23 L 23 10 11 18 7 10 10 10 10 11 12 14 15 15 15 16 16 17 18 20 20 22 23 23 LCS_GDT A 24 A 24 10 11 18 7 10 10 10 10 11 12 14 15 15 15 16 16 17 18 20 20 22 23 23 LCS_GDT A 25 A 25 10 11 18 7 10 10 10 10 11 12 14 15 15 15 16 16 17 18 20 20 22 23 23 LCS_GDT N 26 N 26 10 11 18 7 10 10 10 10 11 12 14 15 15 15 16 16 17 18 20 20 22 23 23 LCS_GDT E 27 E 27 10 11 18 6 10 10 10 10 11 12 14 15 15 15 16 16 17 18 20 20 22 23 23 LCS_GDT L 28 L 28 10 11 18 6 10 10 10 10 11 12 14 15 15 15 16 16 17 18 20 20 22 23 23 LCS_GDT R 29 R 29 10 11 18 6 10 10 10 10 11 12 14 15 15 15 16 16 17 18 20 20 22 23 23 LCS_GDT V 30 V 30 4 6 18 3 3 4 4 5 7 12 14 15 15 15 16 16 17 18 20 20 22 23 23 LCS_GDT T 31 T 31 4 6 18 3 3 4 4 9 11 12 14 15 15 15 16 16 17 18 20 20 22 23 23 LCS_GDT E 32 E 32 4 10 18 3 4 6 8 9 11 12 14 15 15 15 16 16 17 18 20 20 22 23 23 LCS_GDT R 33 R 33 4 10 18 3 4 6 8 9 11 12 14 15 15 15 16 16 17 18 20 20 22 23 23 LCS_GDT P 34 P 34 4 10 18 1 3 6 8 9 11 11 12 13 13 15 16 16 17 17 20 20 22 23 23 LCS_GDT F 35 F 35 4 10 18 3 3 4 5 9 11 11 12 12 12 12 14 15 17 17 18 20 22 23 23 LCS_GDT W 36 W 36 6 10 15 4 6 6 6 7 11 11 12 12 12 12 14 15 17 17 18 19 22 23 23 LCS_GDT I 37 I 37 6 10 15 4 6 6 8 9 11 11 12 12 12 12 14 14 14 14 15 16 18 20 21 LCS_GDT S 38 S 38 6 10 15 4 6 6 8 9 11 11 12 12 12 12 14 14 14 14 15 16 18 20 21 LCS_GDT S 39 S 39 6 10 15 4 6 6 8 9 11 11 12 12 12 12 14 14 14 14 16 17 19 20 21 LCS_GDT F 40 F 40 6 10 15 4 6 6 8 9 11 11 12 12 12 12 14 14 14 14 15 15 18 18 19 LCS_GDT I 41 I 41 6 10 15 4 6 6 8 9 11 11 12 12 12 12 14 14 14 14 15 15 18 18 19 LCS_GDT G 42 G 42 4 7 15 3 4 6 6 7 7 10 12 12 12 12 14 14 14 14 15 15 15 16 17 LCS_GDT R 43 R 43 4 5 15 3 4 6 6 7 7 8 9 9 10 12 14 14 14 14 15 15 15 15 16 LCS_GDT S 44 S 44 4 5 15 0 4 6 6 7 7 8 9 9 10 12 14 14 14 14 15 15 15 15 16 LCS_GDT K 45 K 45 4 5 15 0 3 6 6 7 7 8 9 9 10 12 12 13 13 13 15 15 15 15 16 LCS_AVERAGE LCS_A: 22.69 ( 12.96 18.39 36.73 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 10 10 10 10 11 12 14 15 15 15 16 16 17 18 20 20 22 23 23 GDT PERCENT_AT 15.91 22.73 22.73 22.73 22.73 25.00 27.27 31.82 34.09 34.09 34.09 36.36 36.36 38.64 40.91 45.45 45.45 50.00 52.27 52.27 GDT RMS_LOCAL 0.28 0.57 0.57 0.57 0.57 2.18 2.28 2.96 3.06 3.06 3.06 3.57 3.57 4.11 5.26 5.66 5.66 6.44 6.60 6.60 GDT RMS_ALL_AT 24.38 24.34 24.34 24.34 24.34 34.72 23.65 22.60 22.81 22.81 22.81 22.54 22.54 22.00 21.46 20.95 20.95 19.77 19.86 19.86 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 27 E 27 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 41.660 0 0.628 0.609 42.907 0.000 0.000 - LGA V 3 V 3 41.315 0 0.654 0.840 43.902 0.000 0.000 40.482 LGA Q 4 Q 4 43.278 0 0.678 0.893 49.835 0.000 0.000 48.334 LGA G 5 G 5 38.755 0 0.243 0.243 40.673 0.000 0.000 - LGA P 6 P 6 33.827 0 0.653 0.512 35.608 0.000 0.000 33.044 LGA W 7 W 7 30.616 0 0.233 1.225 31.798 0.000 0.000 26.976 LGA V 8 V 8 34.465 0 0.031 0.307 37.993 0.000 0.000 37.799 LGA G 9 G 9 29.683 0 0.430 0.430 31.168 0.000 0.000 - LGA S 10 S 10 25.901 0 0.039 0.057 27.314 0.000 0.000 26.561 LGA S 11 S 11 26.168 0 0.583 0.923 29.346 0.000 0.000 29.346 LGA Y 12 Y 12 22.920 0 0.652 1.472 23.797 0.000 0.000 20.471 LGA V 13 V 13 15.677 0 0.558 1.311 18.181 0.000 0.000 12.714 LGA A 14 A 14 15.852 0 0.093 0.095 16.810 0.000 0.000 - LGA E 15 E 15 15.264 0 0.026 1.173 17.699 0.000 0.000 16.538 LGA T 16 T 16 15.922 0 0.109 0.240 17.777 0.000 0.000 16.449 LGA G 17 G 17 14.464 0 0.075 0.075 14.810 0.000 0.000 - LGA Q 18 Q 18 8.347 0 0.046 0.915 10.630 0.000 0.000 6.603 LGA N 19 N 19 3.630 0 0.467 0.371 8.246 20.455 10.455 8.082 LGA W 20 W 20 3.734 0 0.636 1.155 12.261 22.727 6.494 12.261 LGA A 21 A 21 4.467 0 0.054 0.052 5.540 8.182 6.545 - LGA S 22 S 22 3.949 0 0.022 0.648 4.601 17.727 13.939 3.842 LGA L 23 L 23 1.379 0 0.051 0.842 2.702 66.818 61.364 2.702 LGA A 24 A 24 1.525 0 0.017 0.020 2.765 65.909 58.182 - LGA A 25 A 25 2.393 0 0.022 0.022 3.832 41.364 35.273 - LGA N 26 N 26 3.328 0 0.036 1.192 4.473 21.364 17.727 2.888 LGA E 27 E 27 3.372 0 0.060 1.111 4.081 19.545 30.101 1.177 LGA L 28 L 28 1.646 0 0.218 0.800 2.365 58.636 55.227 2.365 LGA R 29 R 29 2.262 0 0.535 1.525 11.737 55.909 20.496 10.983 LGA V 30 V 30 3.925 0 0.648 0.895 8.289 12.273 7.013 8.289 LGA T 31 T 31 3.293 0 0.687 0.552 6.239 28.182 16.623 4.580 LGA E 32 E 32 0.803 0 0.076 0.998 6.541 56.364 38.384 6.541 LGA R 33 R 33 3.627 0 0.630 1.304 5.950 12.273 29.587 3.087 LGA P 34 P 34 10.331 0 0.043 0.350 12.767 0.000 0.000 12.329 LGA F 35 F 35 14.554 0 0.563 1.533 16.963 0.000 0.000 15.901 LGA W 36 W 36 16.678 0 0.660 0.498 18.622 0.000 0.000 12.964 LGA I 37 I 37 23.015 0 0.081 1.553 26.489 0.000 0.000 26.415 LGA S 38 S 38 24.567 0 0.082 0.629 24.685 0.000 0.000 24.161 LGA S 39 S 39 18.834 0 0.131 0.702 20.417 0.000 0.000 14.960 LGA F 40 F 40 24.120 0 0.048 0.913 27.219 0.000 0.000 21.657 LGA I 41 I 41 29.061 0 0.054 0.599 31.315 0.000 0.000 29.011 LGA G 42 G 42 33.326 0 0.186 0.186 34.652 0.000 0.000 - LGA R 43 R 43 32.747 0 0.676 0.904 36.536 0.000 0.000 22.940 LGA S 44 S 44 35.713 0 0.667 0.971 39.143 0.000 0.000 39.143 LGA K 45 K 45 35.445 0 0.092 0.734 37.798 0.000 0.000 32.682 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 18.376 18.401 18.198 11.539 9.259 5.403 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 14 2.96 30.682 26.796 0.457 LGA_LOCAL RMSD: 2.964 Number of atoms: 14 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 22.603 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 18.376 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.074056 * X + -0.590380 * Y + 0.803721 * Z + -1.642968 Y_new = -0.779846 * X + 0.536611 * Y + 0.322317 * Z + 87.630249 Z_new = -0.621575 * X + -0.602909 * Y + -0.500145 * Z + 60.795807 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.665474 0.670752 -2.263299 [DEG: -95.4246 38.4313 -129.6775 ] ZXZ: 1.952191 2.094562 -2.340951 [DEG: 111.8523 120.0096 -134.1266 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS041_5-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS041_5-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 14 2.96 26.796 18.38 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS041_5-D1 PFRMAT TS TARGET T0953s2 MODEL 5 PARENT N/A ATOM 12 N ALA 2 -14.880 9.884 -8.648 1.00 0.00 N ATOM 14 CA ALA 2 -14.319 10.007 -7.291 1.00 0.00 C ATOM 16 C ALA 2 -13.784 8.661 -6.780 1.00 0.00 C ATOM 17 O ALA 2 -12.743 8.623 -6.113 1.00 0.00 O ATOM 15 CB ALA 2 -15.374 10.551 -6.331 1.00 0.00 C ATOM 18 N VAL 3 -14.497 7.574 -7.111 1.00 0.00 N ATOM 20 CA VAL 3 -14.148 6.192 -6.715 1.00 0.00 C ATOM 24 C VAL 3 -13.294 5.445 -7.768 1.00 0.00 C ATOM 25 O VAL 3 -12.503 4.558 -7.417 1.00 0.00 O ATOM 21 CB VAL 3 -15.426 5.347 -6.325 1.00 0.00 C ATOM 22 CG1 VAL 3 -15.918 5.759 -4.945 1.00 0.00 C ATOM 23 CG2 VAL 3 -16.568 5.514 -7.356 1.00 0.00 C ATOM 26 N GLN 4 -13.443 5.850 -9.038 1.00 0.00 N ATOM 28 CA GLN 4 -12.722 5.266 -10.187 1.00 0.00 C ATOM 36 C GLN 4 -11.449 6.052 -10.537 1.00 0.00 C ATOM 37 O GLN 4 -10.498 5.486 -11.092 1.00 0.00 O ATOM 29 CB GLN 4 -13.642 5.193 -11.415 1.00 0.00 C ATOM 30 CG GLN 4 -14.778 4.180 -11.304 1.00 0.00 C ATOM 31 CD GLN 4 -15.653 4.148 -12.542 1.00 0.00 C ATOM 32 OE1 GLN 4 -15.405 3.381 -13.472 1.00 0.00 O ATOM 33 NE2 GLN 4 -16.687 4.983 -12.562 1.00 0.00 N ATOM 38 N GLY 5 -11.441 7.342 -10.185 1.00 0.00 N ATOM 40 CA GLY 5 -10.302 8.215 -10.448 1.00 0.00 C ATOM 41 C GLY 5 -9.561 8.624 -9.175 1.00 0.00 C ATOM 42 O GLY 5 -9.208 7.725 -8.403 1.00 0.00 O ATOM 43 N PRO 6 -9.304 9.942 -8.912 1.00 0.00 N ATOM 45 CA PRO 6 -8.592 10.387 -7.694 1.00 0.00 C ATOM 48 C PRO 6 -9.301 10.128 -6.337 1.00 0.00 C ATOM 49 O PRO 6 -10.515 10.340 -6.224 1.00 0.00 O ATOM 46 CB PRO 6 -8.354 11.882 -7.956 1.00 0.00 C ATOM 47 CG PRO 6 -9.466 12.270 -8.905 1.00 0.00 C ATOM 44 CD PRO 6 -9.500 11.089 -9.831 1.00 0.00 C ATOM 50 N TRP 7 -8.519 9.677 -5.339 1.00 0.00 N ATOM 52 CA TRP 7 -8.938 9.342 -3.948 1.00 0.00 C ATOM 64 C TRP 7 -10.325 8.694 -3.712 1.00 0.00 C ATOM 65 O TRP 7 -11.363 9.328 -3.946 1.00 0.00 O ATOM 53 CB TRP 7 -8.692 10.534 -2.972 1.00 0.00 C ATOM 54 CG TRP 7 -9.311 11.910 -3.350 1.00 0.00 C ATOM 58 CD1 TRP 7 -8.714 12.904 -4.091 1.00 0.00 C ATOM 55 CD2 TRP 7 -10.607 12.426 -2.970 1.00 0.00 C ATOM 59 NE1 TRP 7 -9.548 13.991 -4.194 1.00 0.00 N ATOM 56 CE2 TRP 7 -10.712 13.735 -3.522 1.00 0.00 C ATOM 57 CE3 TRP 7 -11.689 11.914 -2.218 1.00 0.00 C ATOM 61 CZ2 TRP 7 -11.861 14.546 -3.347 1.00 0.00 C ATOM 62 CZ3 TRP 7 -12.839 12.723 -2.041 1.00 0.00 C ATOM 63 CH2 TRP 7 -12.908 14.027 -2.608 1.00 0.00 C ATOM 66 N VAL 8 -10.314 7.431 -3.256 1.00 0.00 N ATOM 68 CA VAL 8 -11.529 6.635 -2.973 1.00 0.00 C ATOM 72 C VAL 8 -11.815 6.660 -1.456 1.00 0.00 C ATOM 73 O VAL 8 -12.982 6.660 -1.041 1.00 0.00 O ATOM 69 CB VAL 8 -11.384 5.140 -3.484 1.00 0.00 C ATOM 70 CG1 VAL 8 -12.758 4.450 -3.585 1.00 0.00 C ATOM 71 CG2 VAL 8 -10.686 5.092 -4.844 1.00 0.00 C ATOM 74 N GLY 9 -10.746 6.704 -0.656 1.00 0.00 N ATOM 76 CA GLY 9 -10.867 6.731 0.795 1.00 0.00 C ATOM 77 C GLY 9 -9.516 6.788 1.488 1.00 0.00 C ATOM 78 O GLY 9 -9.389 6.334 2.631 1.00 0.00 O ATOM 79 N SER 10 -8.521 7.348 0.789 1.00 0.00 N ATOM 81 CA SER 10 -7.143 7.496 1.285 1.00 0.00 C ATOM 85 C SER 10 -6.818 8.949 1.670 1.00 0.00 C ATOM 86 O SER 10 -6.040 9.183 2.603 1.00 0.00 O ATOM 82 CB SER 10 -6.141 6.991 0.237 1.00 0.00 C ATOM 83 OG SER 10 -6.340 7.616 -1.022 1.00 0.00 O ATOM 87 N SER 11 -7.435 9.906 0.954 1.00 0.00 N ATOM 89 CA SER 11 -7.291 11.379 1.125 1.00 0.00 C ATOM 92 C SER 11 -5.865 11.955 1.005 1.00 0.00 C ATOM 93 O SER 11 -4.904 11.360 1.510 1.00 0.00 O ATOM 94 CB SER 11 -7.950 11.872 2.428 1.00 0.00 C ATOM 90 OG SER 11 -9.335 11.576 2.441 1.00 0.00 O ATOM 95 N TYR 12 -5.752 13.111 0.332 1.00 0.00 N ATOM 97 CA TYR 12 -4.478 13.819 0.108 1.00 0.00 C ATOM 107 C TYR 12 -4.450 15.120 0.933 1.00 0.00 C ATOM 108 O TYR 12 -5.504 15.716 1.176 1.00 0.00 O ATOM 98 CB TYR 12 -4.301 14.131 -1.403 1.00 0.00 C ATOM 99 CG TYR 12 -2.865 14.306 -1.924 1.00 0.00 C ATOM 100 CD1 TYR 12 -2.260 15.586 -1.984 1.00 0.00 C ATOM 102 CD2 TYR 12 -2.116 13.198 -2.393 1.00 0.00 C ATOM 101 CE1 TYR 12 -0.944 15.758 -2.497 1.00 0.00 C ATOM 103 CE2 TYR 12 -0.799 13.361 -2.907 1.00 0.00 C ATOM 104 CZ TYR 12 -0.225 14.643 -2.955 1.00 0.00 C ATOM 105 OH TYR 12 1.048 14.807 -3.452 1.00 0.00 O ATOM 109 N VAL 13 -3.232 15.548 1.319 1.00 0.00 N ATOM 111 CA VAL 13 -2.907 16.763 2.128 1.00 0.00 C ATOM 115 C VAL 13 -3.876 17.265 3.232 1.00 0.00 C ATOM 116 O VAL 13 -5.077 17.433 2.986 1.00 0.00 O ATOM 112 CB VAL 13 -2.384 17.983 1.247 1.00 0.00 C ATOM 113 CG1 VAL 13 -1.002 17.670 0.691 1.00 0.00 C ATOM 114 CG2 VAL 13 -3.354 18.332 0.098 1.00 0.00 C ATOM 117 N ALA 14 -3.324 17.496 4.432 1.00 0.00 N ATOM 119 CA ALA 14 -4.071 17.976 5.607 1.00 0.00 C ATOM 121 C ALA 14 -3.687 19.422 5.960 1.00 0.00 C ATOM 122 O ALA 14 -4.476 20.137 6.590 1.00 0.00 O ATOM 120 CB ALA 14 -3.819 17.056 6.803 1.00 0.00 C ATOM 123 N GLU 15 -2.483 19.834 5.535 1.00 0.00 N ATOM 125 CA GLU 15 -1.918 21.183 5.764 1.00 0.00 C ATOM 131 C GLU 15 -2.638 22.315 5.004 1.00 0.00 C ATOM 132 O GLU 15 -2.785 23.422 5.534 1.00 0.00 O ATOM 126 CB GLU 15 -0.421 21.206 5.423 1.00 0.00 C ATOM 127 CG GLU 15 0.465 20.408 6.378 1.00 0.00 C ATOM 128 CD GLU 15 1.933 20.463 6.000 1.00 0.00 C ATOM 129 OE1 GLU 15 2.383 19.591 5.226 1.00 0.00 O ATOM 130 OE2 GLU 15 2.639 21.376 6.479 1.00 0.00 O ATOM 133 N THR 16 -3.081 22.013 3.774 1.00 0.00 N ATOM 135 CA THR 16 -3.791 22.950 2.873 1.00 0.00 C ATOM 140 C THR 16 -5.204 23.366 3.334 1.00 0.00 C ATOM 141 O THR 16 -5.599 24.526 3.159 1.00 0.00 O ATOM 136 CB THR 16 -3.863 22.396 1.417 1.00 0.00 C ATOM 137 OG1 THR 16 -4.371 21.057 1.434 1.00 0.00 O ATOM 139 CG2 THR 16 -2.485 22.413 0.762 1.00 0.00 C ATOM 142 N GLY 17 -5.933 22.423 3.945 1.00 0.00 N ATOM 144 CA GLY 17 -7.293 22.663 4.425 1.00 0.00 C ATOM 145 C GLY 17 -7.435 23.402 5.750 1.00 0.00 C ATOM 146 O GLY 17 -8.551 23.788 6.120 1.00 0.00 O ATOM 147 N GLN 18 -6.310 23.595 6.450 1.00 0.00 N ATOM 149 CA GLN 18 -6.260 24.295 7.746 1.00 0.00 C ATOM 157 C GLN 18 -5.616 25.694 7.653 1.00 0.00 C ATOM 158 O GLN 18 -4.724 25.910 6.824 1.00 0.00 O ATOM 150 CB GLN 18 -5.571 23.431 8.832 1.00 0.00 C ATOM 151 CG GLN 18 -4.223 22.776 8.464 1.00 0.00 C ATOM 152 CD GLN 18 -3.643 21.959 9.602 1.00 0.00 C ATOM 153 OE1 GLN 18 -2.900 22.476 10.436 1.00 0.00 O ATOM 154 NE2 GLN 18 -3.979 20.674 9.641 1.00 0.00 N ATOM 159 N ASN 19 -6.079 26.620 8.506 1.00 0.00 N ATOM 161 CA ASN 19 -5.587 28.011 8.564 1.00 0.00 C ATOM 168 C ASN 19 -4.651 28.244 9.774 1.00 0.00 C ATOM 169 O ASN 19 -4.954 29.042 10.675 1.00 0.00 O ATOM 162 CB ASN 19 -6.773 29.000 8.570 1.00 0.00 C ATOM 163 CG ASN 19 -7.572 28.977 7.271 1.00 0.00 C ATOM 164 OD1 ASN 19 -8.536 28.223 7.134 1.00 0.00 O ATOM 165 ND2 ASN 19 -7.181 29.820 6.318 1.00 0.00 N ATOM 170 N TRP 20 -3.520 27.521 9.778 1.00 0.00 N ATOM 172 CA TRP 20 -2.481 27.586 10.830 1.00 0.00 C ATOM 184 C TRP 20 -1.683 28.906 10.887 1.00 0.00 C ATOM 185 O TRP 20 -1.387 29.405 11.980 1.00 0.00 O ATOM 173 CB TRP 20 -1.524 26.369 10.728 1.00 0.00 C ATOM 174 CG TRP 20 -0.923 26.048 9.326 1.00 0.00 C ATOM 178 CD1 TRP 20 -1.445 25.190 8.385 1.00 0.00 C ATOM 175 CD2 TRP 20 0.307 26.554 8.760 1.00 0.00 C ATOM 179 NE1 TRP 20 -0.626 25.133 7.283 1.00 0.00 N ATOM 176 CE2 TRP 20 0.454 25.953 7.477 1.00 0.00 C ATOM 177 CE3 TRP 20 1.301 27.455 9.208 1.00 0.00 C ATOM 181 CZ2 TRP 20 1.558 26.222 6.630 1.00 0.00 C ATOM 182 CZ3 TRP 20 2.407 27.725 8.362 1.00 0.00 C ATOM 183 CH2 TRP 20 2.518 27.106 7.086 1.00 0.00 C ATOM 186 N ALA 21 -1.361 29.454 9.705 1.00 0.00 N ATOM 188 CA ALA 21 -0.604 30.713 9.538 1.00 0.00 C ATOM 190 C ALA 21 -1.381 31.957 10.003 1.00 0.00 C ATOM 191 O ALA 21 -0.811 32.832 10.666 1.00 0.00 O ATOM 189 CB ALA 21 -0.171 30.875 8.084 1.00 0.00 C ATOM 192 N SER 22 -2.678 32.009 9.659 1.00 0.00 N ATOM 194 CA SER 22 -3.597 33.108 10.018 1.00 0.00 C ATOM 198 C SER 22 -3.884 33.134 11.533 1.00 0.00 C ATOM 199 O SER 22 -3.888 34.210 12.145 1.00 0.00 O ATOM 195 CB SER 22 -4.909 32.985 9.227 1.00 0.00 C ATOM 196 OG SER 22 -5.737 34.124 9.395 1.00 0.00 O ATOM 200 N LEU 23 -4.069 31.941 12.121 1.00 0.00 N ATOM 202 CA LEU 23 -4.347 31.743 13.559 1.00 0.00 C ATOM 207 C LEU 23 -3.110 32.122 14.402 1.00 0.00 C ATOM 208 O LEU 23 -3.239 32.804 15.426 1.00 0.00 O ATOM 203 CB LEU 23 -4.774 30.267 13.822 1.00 0.00 C ATOM 204 CG LEU 23 -5.572 29.595 14.985 1.00 0.00 C ATOM 205 CD1 LEU 23 -4.806 29.603 16.318 1.00 0.00 C ATOM 206 CD2 LEU 23 -6.989 30.170 15.157 1.00 0.00 C ATOM 209 N ALA 24 -1.926 31.718 13.918 1.00 0.00 N ATOM 211 CA ALA 24 -0.625 31.986 14.558 1.00 0.00 C ATOM 213 C ALA 24 -0.297 33.486 14.510 1.00 0.00 C ATOM 214 O ALA 24 0.168 34.053 15.506 1.00 0.00 O ATOM 212 CB ALA 24 0.475 31.183 13.874 1.00 0.00 C ATOM 215 N ALA 25 -0.646 34.118 13.377 1.00 0.00 N ATOM 217 CA ALA 25 -0.429 35.552 13.107 1.00 0.00 C ATOM 219 C ALA 25 -1.277 36.465 14.008 1.00 0.00 C ATOM 220 O ALA 25 -0.753 37.447 14.548 1.00 0.00 O ATOM 218 CB ALA 25 -0.702 35.860 11.637 1.00 0.00 C ATOM 221 N ASN 26 -2.572 36.139 14.159 1.00 0.00 N ATOM 223 CA ASN 26 -3.500 36.908 15.012 1.00 0.00 C ATOM 230 C ASN 26 -3.228 36.791 16.525 1.00 0.00 C ATOM 231 O ASN 26 -3.355 37.785 17.247 1.00 0.00 O ATOM 224 CB ASN 26 -4.989 36.632 14.674 1.00 0.00 C ATOM 225 CG ASN 26 -5.385 35.150 14.765 1.00 0.00 C ATOM 226 OD1 ASN 26 -5.249 34.510 15.813 1.00 0.00 O ATOM 227 ND2 ASN 26 -5.938 34.628 13.678 1.00 0.00 N ATOM 232 N GLU 27 -2.860 35.584 16.987 1.00 0.00 N ATOM 234 CA GLU 27 -2.553 35.319 18.408 1.00 0.00 C ATOM 239 C GLU 27 -1.253 35.973 18.932 1.00 0.00 C ATOM 240 O GLU 27 -1.216 36.420 20.083 1.00 0.00 O ATOM 241 CB GLU 27 -2.609 33.806 18.746 1.00 0.00 C ATOM 235 CG GLU 27 -1.566 32.864 18.100 1.00 0.00 C ATOM 236 CD GLU 27 -0.406 32.517 19.028 1.00 0.00 C ATOM 237 OE1 GLU 27 -0.499 31.496 19.742 1.00 0.00 O ATOM 238 OE2 GLU 27 0.593 33.265 19.038 1.00 0.00 O ATOM 242 N LEU 28 -0.211 36.019 18.087 1.00 0.00 N ATOM 244 CA LEU 28 1.099 36.614 18.432 1.00 0.00 C ATOM 249 C LEU 28 1.078 38.148 18.620 1.00 0.00 C ATOM 250 O LEU 28 1.783 38.671 19.490 1.00 0.00 O ATOM 245 CB LEU 28 2.204 36.184 17.430 1.00 0.00 C ATOM 246 CG LEU 28 2.292 36.446 15.907 1.00 0.00 C ATOM 247 CD1 LEU 28 2.997 37.773 15.588 1.00 0.00 C ATOM 248 CD2 LEU 28 3.069 35.306 15.267 1.00 0.00 C ATOM 251 N ARG 29 0.268 38.836 17.804 1.00 0.00 N ATOM 253 CA ARG 29 0.111 40.307 17.827 1.00 0.00 C ATOM 266 C ARG 29 -0.904 40.800 18.876 1.00 0.00 C ATOM 267 O ARG 29 -1.874 40.096 19.180 1.00 0.00 O ATOM 254 CB ARG 29 -0.293 40.828 16.440 1.00 0.00 C ATOM 255 CG ARG 29 0.808 40.764 15.383 1.00 0.00 C ATOM 256 CD ARG 29 0.342 41.295 14.028 1.00 0.00 C ATOM 257 NE ARG 29 0.126 42.745 14.028 1.00 0.00 N ATOM 259 CZ ARG 29 -0.274 43.462 12.977 1.00 0.00 C ATOM 260 NH1 ARG 29 -0.434 44.772 13.103 1.00 0.00 N ATOM 263 NH2 ARG 29 -0.516 42.888 11.802 1.00 0.00 N ATOM 268 N VAL 30 -0.658 42.005 19.414 1.00 0.00 N ATOM 270 CA VAL 30 -1.506 42.657 20.435 1.00 0.00 C ATOM 274 C VAL 30 -2.529 43.655 19.842 1.00 0.00 C ATOM 275 O VAL 30 -3.588 43.896 20.440 1.00 0.00 O ATOM 271 CB VAL 30 -0.642 43.345 21.569 1.00 0.00 C ATOM 272 CG1 VAL 30 -0.094 42.285 22.514 1.00 0.00 C ATOM 273 CG2 VAL 30 0.523 44.177 20.985 1.00 0.00 C ATOM 276 N THR 31 -2.214 44.183 18.649 1.00 0.00 N ATOM 278 CA THR 31 -3.051 45.157 17.916 1.00 0.00 C ATOM 283 C THR 31 -4.127 44.488 17.033 1.00 0.00 C ATOM 284 O THR 31 -3.928 43.360 16.561 1.00 0.00 O ATOM 279 CB THR 31 -2.181 46.116 17.044 1.00 0.00 C ATOM 280 OG1 THR 31 -1.266 45.352 16.249 1.00 0.00 O ATOM 282 CG2 THR 31 -1.404 47.091 17.922 1.00 0.00 C ATOM 285 N GLU 32 -5.261 45.188 16.839 1.00 0.00 N ATOM 287 CA GLU 32 -6.443 44.761 16.038 1.00 0.00 C ATOM 293 C GLU 32 -7.152 43.479 16.516 1.00 0.00 C ATOM 294 O GLU 32 -6.486 42.483 16.830 1.00 0.00 O ATOM 288 CB GLU 32 -6.126 44.663 14.529 1.00 0.00 C ATOM 289 CG GLU 32 -5.829 45.998 13.853 1.00 0.00 C ATOM 290 CD GLU 32 -5.522 45.851 12.375 1.00 0.00 C ATOM 291 OE1 GLU 32 -4.335 45.677 12.025 1.00 0.00 O ATOM 292 OE2 GLU 32 -6.468 45.912 11.560 1.00 0.00 O ATOM 295 N ARG 33 -8.496 43.542 16.575 1.00 0.00 N ATOM 297 CA ARG 33 -9.472 42.491 16.993 1.00 0.00 C ATOM 310 C ARG 33 -10.074 42.580 18.429 1.00 0.00 C ATOM 311 O ARG 33 -11.305 42.536 18.542 1.00 0.00 O ATOM 298 CB ARG 33 -9.045 41.040 16.660 1.00 0.00 C ATOM 299 CG ARG 33 -9.070 40.699 15.175 1.00 0.00 C ATOM 300 CD ARG 33 -8.661 39.254 14.933 1.00 0.00 C ATOM 301 NE ARG 33 -8.685 38.905 13.510 1.00 0.00 N ATOM 303 CZ ARG 33 -8.432 37.695 13.011 1.00 0.00 C ATOM 304 NH1 ARG 33 -8.484 37.505 11.701 1.00 0.00 N ATOM 307 NH2 ARG 33 -8.127 36.672 13.805 1.00 0.00 N ATOM 312 N PRO 34 -9.256 42.687 19.533 1.00 0.00 N ATOM 314 CA PRO 34 -9.915 42.773 20.861 1.00 0.00 C ATOM 317 C PRO 34 -10.659 44.095 21.200 1.00 0.00 C ATOM 318 O PRO 34 -10.448 45.111 20.531 1.00 0.00 O ATOM 315 CB PRO 34 -8.762 42.493 21.837 1.00 0.00 C ATOM 316 CG PRO 34 -7.548 42.982 21.106 1.00 0.00 C ATOM 313 CD PRO 34 -7.801 42.458 19.725 1.00 0.00 C ATOM 319 N PHE 35 -11.502 44.045 22.250 1.00 0.00 N ATOM 321 CA PHE 35 -12.335 45.151 22.799 1.00 0.00 C ATOM 329 C PHE 35 -12.968 46.224 21.877 1.00 0.00 C ATOM 330 O PHE 35 -14.198 46.345 21.836 1.00 0.00 O ATOM 322 CB PHE 35 -11.656 45.818 24.043 1.00 0.00 C ATOM 323 CG PHE 35 -10.220 46.312 23.818 1.00 0.00 C ATOM 324 CD1 PHE 35 -9.114 45.476 24.103 1.00 0.00 C ATOM 325 CD2 PHE 35 -9.969 47.628 23.357 1.00 0.00 C ATOM 326 CE1 PHE 35 -7.780 45.939 23.932 1.00 0.00 C ATOM 327 CE2 PHE 35 -8.641 48.104 23.182 1.00 0.00 C ATOM 328 CZ PHE 35 -7.543 47.256 23.470 1.00 0.00 C ATOM 331 N TRP 36 -12.120 46.987 21.161 1.00 0.00 N ATOM 333 CA TRP 36 -12.480 48.084 20.217 1.00 0.00 C ATOM 345 C TRP 36 -13.097 49.357 20.834 1.00 0.00 C ATOM 346 O TRP 36 -12.830 50.464 20.352 1.00 0.00 O ATOM 334 CB TRP 36 -13.362 47.589 19.037 1.00 0.00 C ATOM 335 CG TRP 36 -12.704 46.584 18.067 1.00 0.00 C ATOM 339 CD1 TRP 36 -12.819 45.214 18.102 1.00 0.00 C ATOM 336 CD2 TRP 36 -11.885 46.881 16.911 1.00 0.00 C ATOM 340 NE1 TRP 36 -12.134 44.648 17.055 1.00 0.00 N ATOM 337 CE2 TRP 36 -11.551 45.636 16.307 1.00 0.00 C ATOM 338 CE3 TRP 36 -11.402 48.074 16.327 1.00 0.00 C ATOM 342 CZ2 TRP 36 -10.752 45.544 15.140 1.00 0.00 C ATOM 343 CZ3 TRP 36 -10.601 47.986 15.159 1.00 0.00 C ATOM 344 CH2 TRP 36 -10.289 46.723 14.583 1.00 0.00 C ATOM 347 N ILE 37 -13.890 49.187 21.903 1.00 0.00 N ATOM 349 CA ILE 37 -14.576 50.284 22.629 1.00 0.00 C ATOM 354 C ILE 37 -13.661 51.267 23.405 1.00 0.00 C ATOM 355 O ILE 37 -13.929 52.476 23.434 1.00 0.00 O ATOM 350 CB ILE 37 -15.740 49.750 23.560 1.00 0.00 C ATOM 352 CG1 ILE 37 -15.286 48.550 24.427 1.00 0.00 C ATOM 351 CG2 ILE 37 -16.959 49.398 22.695 1.00 0.00 C ATOM 353 CD1 ILE 37 -15.896 48.497 25.835 1.00 0.00 C ATOM 356 N SER 38 -12.582 50.729 23.994 1.00 0.00 N ATOM 358 CA SER 38 -11.583 51.480 24.785 1.00 0.00 C ATOM 362 C SER 38 -10.733 52.468 23.958 1.00 0.00 C ATOM 363 O SER 38 -10.392 53.549 24.450 1.00 0.00 O ATOM 359 CB SER 38 -10.669 50.502 25.539 1.00 0.00 C ATOM 360 OG SER 38 -9.843 51.169 26.481 1.00 0.00 O ATOM 364 N SER 39 -10.415 52.084 22.712 1.00 0.00 N ATOM 366 CA SER 39 -9.601 52.874 21.760 1.00 0.00 C ATOM 370 C SER 39 -10.152 54.265 21.384 1.00 0.00 C ATOM 371 O SER 39 -9.371 55.210 21.210 1.00 0.00 O ATOM 367 CB SER 39 -9.350 52.061 20.484 1.00 0.00 C ATOM 368 OG SER 39 -8.655 50.859 20.768 1.00 0.00 O ATOM 372 N PHE 40 -11.484 54.375 21.273 1.00 0.00 N ATOM 374 CA PHE 40 -12.200 55.621 20.917 1.00 0.00 C ATOM 382 C PHE 40 -12.139 56.756 21.956 1.00 0.00 C ATOM 383 O PHE 40 -12.072 57.933 21.579 1.00 0.00 O ATOM 375 CB PHE 40 -13.679 55.316 20.570 1.00 0.00 C ATOM 376 CG PHE 40 -13.885 54.542 19.269 1.00 0.00 C ATOM 377 CD1 PHE 40 -13.977 53.129 19.274 1.00 0.00 C ATOM 378 CD2 PHE 40 -14.031 55.222 18.035 1.00 0.00 C ATOM 379 CE1 PHE 40 -14.210 52.403 18.073 1.00 0.00 C ATOM 380 CE2 PHE 40 -14.264 54.510 16.826 1.00 0.00 C ATOM 381 CZ PHE 40 -14.354 53.096 16.846 1.00 0.00 C ATOM 384 N ILE 41 -12.170 56.389 23.252 1.00 0.00 N ATOM 386 CA ILE 41 -12.132 57.294 24.444 1.00 0.00 C ATOM 391 C ILE 41 -13.342 58.256 24.523 1.00 0.00 C ATOM 392 O ILE 41 -13.786 58.794 23.500 1.00 0.00 O ATOM 387 CB ILE 41 -10.730 58.100 24.605 1.00 0.00 C ATOM 389 CG1 ILE 41 -9.491 57.169 24.440 1.00 0.00 C ATOM 388 CG2 ILE 41 -10.695 58.942 25.920 1.00 0.00 C ATOM 390 CD1 ILE 41 -9.106 56.174 25.607 1.00 0.00 C ATOM 393 N GLY 42 -13.852 58.453 25.743 1.00 0.00 N ATOM 395 CA GLY 42 -14.991 59.332 25.978 1.00 0.00 C ATOM 396 C GLY 42 -15.258 59.533 27.459 1.00 0.00 C ATOM 397 O GLY 42 -16.414 59.714 27.861 1.00 0.00 O ATOM 398 N ARG 43 -14.183 59.501 28.257 1.00 0.00 N ATOM 400 CA ARG 43 -14.231 59.674 29.720 1.00 0.00 C ATOM 413 C ARG 43 -13.753 61.066 30.187 1.00 0.00 C ATOM 414 O ARG 43 -14.050 61.482 31.317 1.00 0.00 O ATOM 401 CB ARG 43 -13.461 58.537 30.438 1.00 0.00 C ATOM 402 CG ARG 43 -12.050 58.185 29.899 1.00 0.00 C ATOM 403 CD ARG 43 -11.402 57.043 30.679 1.00 0.00 C ATOM 404 NE ARG 43 -12.060 55.754 30.451 1.00 0.00 N ATOM 406 CZ ARG 43 -11.698 54.597 31.009 1.00 0.00 C ATOM 407 NH1 ARG 43 -12.375 53.493 30.723 1.00 0.00 N ATOM 410 NH2 ARG 43 -10.669 54.530 31.849 1.00 0.00 N ATOM 415 N SER 44 -13.037 61.776 29.294 1.00 0.00 N ATOM 417 CA SER 44 -12.455 63.136 29.481 1.00 0.00 C ATOM 421 C SER 44 -11.311 63.252 30.512 1.00 0.00 C ATOM 422 O SER 44 -10.373 64.032 30.307 1.00 0.00 O ATOM 418 CB SER 44 -13.544 64.201 29.754 1.00 0.00 C ATOM 419 OG SER 44 -13.022 65.520 29.693 1.00 0.00 O ATOM 423 N LYS 45 -11.394 62.465 31.601 1.00 0.00 N ATOM 425 CA LYS 45 -10.417 62.398 32.725 1.00 0.00 C ATOM 433 C LYS 45 -10.165 63.708 33.498 1.00 0.00 C ATOM 434 O LYS 45 -10.113 64.788 32.896 1.00 0.00 O ATOM 435 CB LYS 45 -9.070 61.781 32.288 1.00 0.00 C ATOM 426 CG LYS 45 -9.139 60.309 31.896 1.00 0.00 C ATOM 427 CD LYS 45 -7.783 59.795 31.441 1.00 0.00 C ATOM 428 CE LYS 45 -7.850 58.328 31.050 1.00 0.00 C ATOM 429 NZ LYS 45 -6.528 57.812 30.599 1.00 0.00 N TER END