####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS041_2-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS041_2-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 19 15 - 33 4.94 19.42 LCS_AVERAGE: 37.96 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 19 - 29 1.76 20.34 LONGEST_CONTINUOUS_SEGMENT: 11 20 - 30 1.50 20.84 LCS_AVERAGE: 19.52 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 20 - 29 0.59 20.95 LCS_AVERAGE: 14.00 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 5 8 13 3 5 5 6 7 7 8 8 9 9 10 12 12 13 15 16 18 18 20 22 LCS_GDT V 3 V 3 5 8 13 4 5 5 6 7 7 8 8 9 9 10 12 13 13 15 16 18 18 20 22 LCS_GDT Q 4 Q 4 5 8 14 4 5 5 6 7 7 8 8 9 9 11 12 13 14 15 16 18 18 20 22 LCS_GDT G 5 G 5 5 8 14 4 5 5 6 7 7 8 8 10 10 12 13 14 15 15 16 18 19 20 22 LCS_GDT P 6 P 6 5 8 14 4 5 5 6 7 7 8 10 11 11 12 13 14 15 15 16 18 20 20 22 LCS_GDT W 7 W 7 5 8 14 3 3 5 6 7 7 8 10 11 11 12 13 14 15 15 17 18 20 20 22 LCS_GDT V 8 V 8 3 8 14 3 3 4 6 7 7 8 10 11 11 12 13 14 15 15 16 18 20 20 22 LCS_GDT G 9 G 9 3 8 14 3 3 3 4 5 7 8 10 11 11 12 13 13 13 15 16 18 18 20 22 LCS_GDT S 10 S 10 3 5 15 3 3 4 4 5 5 7 8 11 11 12 13 13 14 15 17 18 20 21 23 LCS_GDT S 11 S 11 3 4 15 3 3 4 4 4 5 7 8 8 10 12 13 14 15 16 18 19 22 22 23 LCS_GDT Y 12 Y 12 3 4 15 3 3 4 4 5 7 7 10 11 11 12 13 14 15 15 17 18 20 20 22 LCS_GDT V 13 V 13 5 5 18 3 5 5 5 6 7 7 10 11 12 12 15 16 20 21 21 21 22 22 23 LCS_GDT A 14 A 14 5 5 18 4 5 5 5 6 7 7 10 11 12 12 15 19 20 21 21 21 22 22 23 LCS_GDT E 15 E 15 5 5 19 4 5 5 5 6 7 7 10 11 12 12 15 19 20 21 21 21 22 22 23 LCS_GDT T 16 T 16 5 5 19 4 5 5 5 6 7 7 10 11 12 12 15 19 20 21 21 21 22 22 23 LCS_GDT G 17 G 17 5 5 19 4 5 5 5 6 7 7 10 11 11 13 16 19 20 21 21 21 22 22 23 LCS_GDT Q 18 Q 18 4 5 19 3 4 4 4 5 7 7 9 10 12 14 16 19 20 21 21 21 22 22 23 LCS_GDT N 19 N 19 4 11 19 3 4 6 8 8 10 11 12 12 13 14 16 19 20 21 21 21 22 22 23 LCS_GDT W 20 W 20 10 11 19 7 10 10 10 10 10 11 12 12 13 14 15 16 19 21 21 21 22 22 23 LCS_GDT A 21 A 21 10 11 19 7 10 10 10 10 10 11 12 12 13 14 16 19 20 21 21 21 22 22 23 LCS_GDT S 22 S 22 10 11 19 7 10 10 10 10 10 11 12 12 13 14 16 19 20 21 21 21 22 22 23 LCS_GDT L 23 L 23 10 11 19 7 10 10 10 10 10 11 12 12 13 14 16 19 20 21 21 21 22 22 23 LCS_GDT A 24 A 24 10 11 19 7 10 10 10 10 10 11 12 12 13 14 16 19 20 21 21 21 22 22 23 LCS_GDT A 25 A 25 10 11 19 7 10 10 10 10 10 11 12 12 13 14 16 19 20 21 21 21 22 22 23 LCS_GDT N 26 N 26 10 11 19 7 10 10 10 10 10 11 12 12 13 14 16 19 20 21 21 21 22 22 23 LCS_GDT E 27 E 27 10 11 19 6 10 10 10 10 10 11 12 12 13 14 16 19 20 21 21 21 22 22 23 LCS_GDT L 28 L 28 10 11 19 6 10 10 10 10 10 11 12 12 13 14 16 19 20 21 21 21 22 22 23 LCS_GDT R 29 R 29 10 11 19 6 10 10 10 10 10 11 12 12 13 14 16 19 20 21 21 21 22 22 23 LCS_GDT V 30 V 30 5 11 19 3 4 6 7 7 9 11 12 12 13 14 16 19 20 21 21 21 22 22 23 LCS_GDT T 31 T 31 5 10 19 3 4 8 8 9 10 10 11 12 13 14 16 19 20 21 21 21 22 22 23 LCS_GDT E 32 E 32 5 10 19 4 6 7 8 9 10 10 11 12 13 14 16 19 20 21 21 21 22 22 23 LCS_GDT R 33 R 33 5 10 19 3 6 7 8 9 10 10 11 12 13 14 16 19 20 21 21 21 22 22 23 LCS_GDT P 34 P 34 4 10 18 3 4 4 7 8 10 10 11 12 13 13 13 13 14 17 18 21 22 22 22 LCS_GDT F 35 F 35 7 10 15 3 6 8 8 9 10 10 11 12 13 13 13 13 14 14 16 18 19 20 22 LCS_GDT W 36 W 36 7 10 15 4 6 8 8 9 10 10 11 12 13 13 13 13 14 14 16 16 17 17 18 LCS_GDT I 37 I 37 7 10 15 4 6 8 8 9 10 10 11 12 13 13 13 13 14 14 16 16 17 17 18 LCS_GDT S 38 S 38 7 10 15 4 6 8 8 9 10 10 11 12 13 13 13 13 14 14 16 16 17 17 18 LCS_GDT S 39 S 39 7 10 15 4 6 8 8 9 10 10 11 12 13 13 13 13 14 14 16 16 17 17 18 LCS_GDT F 40 F 40 7 10 15 4 6 8 8 9 10 10 11 12 13 13 13 13 14 14 16 16 17 17 18 LCS_GDT I 41 I 41 7 10 15 4 5 8 8 9 10 10 11 12 13 13 13 13 14 14 16 16 17 17 18 LCS_GDT G 42 G 42 5 8 15 3 4 5 6 7 9 10 11 12 13 13 13 13 14 14 14 14 17 17 18 LCS_GDT R 43 R 43 5 7 15 3 4 5 6 6 7 10 11 12 13 13 13 13 14 14 14 14 14 15 15 LCS_GDT S 44 S 44 5 7 15 3 4 5 6 6 7 10 11 12 13 13 13 13 14 14 14 14 14 15 15 LCS_GDT K 45 K 45 5 7 15 3 3 5 6 6 7 7 8 10 12 13 13 13 14 14 14 14 14 14 14 LCS_AVERAGE LCS_A: 23.83 ( 14.00 19.52 37.96 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 10 10 10 10 10 11 12 12 13 14 16 19 20 21 21 21 22 22 23 GDT PERCENT_AT 15.91 22.73 22.73 22.73 22.73 22.73 25.00 27.27 27.27 29.55 31.82 36.36 43.18 45.45 47.73 47.73 47.73 50.00 50.00 52.27 GDT RMS_LOCAL 0.29 0.59 0.59 0.59 0.59 0.59 1.50 2.08 2.08 2.72 3.27 4.22 4.93 5.12 5.28 5.28 5.28 5.58 5.58 6.17 GDT RMS_ALL_AT 21.09 20.95 20.95 20.95 20.95 20.95 20.84 20.30 20.30 20.08 20.08 19.51 19.23 19.21 19.27 19.27 19.27 19.38 19.38 19.08 # Checking swapping # possible swapping detected: Y 12 Y 12 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 38.782 0 0.044 0.060 40.709 0.000 0.000 - LGA V 3 V 3 34.567 0 0.054 1.063 36.698 0.000 0.000 30.359 LGA Q 4 Q 4 36.878 0 0.036 0.456 44.849 0.000 0.000 41.763 LGA G 5 G 5 35.202 0 0.088 0.088 38.609 0.000 0.000 - LGA P 6 P 6 34.621 0 0.679 0.636 37.957 0.000 0.000 37.319 LGA W 7 W 7 28.329 0 0.300 1.214 32.422 0.000 0.000 28.291 LGA V 8 V 8 25.251 0 0.606 1.360 28.045 0.000 0.000 24.614 LGA G 9 G 9 21.571 0 0.096 0.096 22.274 0.000 0.000 - LGA S 10 S 10 19.402 0 0.654 0.710 21.439 0.000 0.000 21.439 LGA S 11 S 11 19.527 0 0.120 0.695 21.954 0.000 0.000 21.954 LGA Y 12 Y 12 19.232 0 0.182 0.941 19.754 0.000 0.000 17.368 LGA V 13 V 13 13.006 0 0.570 0.918 14.991 0.000 0.000 12.022 LGA A 14 A 14 14.435 0 0.159 0.168 15.887 0.000 0.000 - LGA E 15 E 15 13.260 0 0.052 1.170 18.076 0.000 0.000 16.816 LGA T 16 T 16 11.446 0 0.112 0.242 13.015 0.000 0.000 12.039 LGA G 17 G 17 11.666 0 0.688 0.688 11.666 0.000 0.000 - LGA Q 18 Q 18 9.510 0 0.589 0.907 15.132 0.000 0.000 11.499 LGA N 19 N 19 4.359 0 0.064 1.139 8.697 13.636 7.500 5.654 LGA W 20 W 20 2.444 0 0.635 1.431 11.589 52.273 14.935 10.875 LGA A 21 A 21 0.809 0 0.043 0.041 1.340 77.727 75.273 - LGA S 22 S 22 1.873 0 0.030 0.644 2.565 50.909 49.394 1.347 LGA L 23 L 23 1.949 0 0.037 0.311 4.708 58.182 35.682 4.002 LGA A 24 A 24 0.981 0 0.012 0.016 1.098 77.727 78.545 - LGA A 25 A 25 0.688 0 0.020 0.022 1.218 82.273 78.909 - LGA N 26 N 26 0.862 0 0.027 0.667 1.971 77.727 72.045 1.971 LGA E 27 E 27 0.575 0 0.060 0.911 3.511 82.273 67.273 3.511 LGA L 28 L 28 0.466 0 0.240 0.800 3.933 95.455 68.864 3.933 LGA R 29 R 29 0.907 0 0.406 1.702 9.286 70.000 34.545 9.286 LGA V 30 V 30 3.956 0 0.115 0.997 6.071 9.545 5.974 4.544 LGA T 31 T 31 7.400 0 0.123 1.046 9.425 0.000 0.000 7.677 LGA E 32 E 32 9.946 0 0.046 1.213 10.861 0.000 0.000 8.035 LGA R 33 R 33 11.905 0 0.663 1.356 12.914 0.000 0.000 11.772 LGA P 34 P 34 16.500 0 0.051 0.355 18.405 0.000 0.000 18.244 LGA F 35 F 35 17.489 0 0.542 1.543 21.510 0.000 0.000 21.142 LGA W 36 W 36 22.704 0 0.042 1.138 27.474 0.000 0.000 27.474 LGA I 37 I 37 26.013 0 0.073 0.310 30.235 0.000 0.000 30.049 LGA S 38 S 38 27.488 0 0.089 0.644 28.680 0.000 0.000 28.462 LGA S 39 S 39 22.072 0 0.135 0.555 23.974 0.000 0.000 20.715 LGA F 40 F 40 21.178 0 0.048 1.519 22.024 0.000 0.000 20.601 LGA I 41 I 41 24.145 0 0.073 1.096 30.083 0.000 0.000 30.083 LGA G 42 G 42 21.997 0 0.034 0.034 23.251 0.000 0.000 - LGA R 43 R 43 24.777 0 0.058 1.015 28.691 0.000 0.000 20.805 LGA S 44 S 44 31.139 0 0.073 0.606 32.030 0.000 0.000 31.886 LGA K 45 K 45 35.203 0 0.053 0.801 39.187 0.000 0.000 39.140 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 18.327 18.287 18.644 16.994 13.385 4.156 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 12 2.08 30.114 26.552 0.549 LGA_LOCAL RMSD: 2.084 Number of atoms: 12 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 20.304 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 18.327 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.163195 * X + 0.651722 * Y + 0.740693 * Z + 5.864625 Y_new = -0.800274 * X + 0.351629 * Y + -0.485714 * Z + 95.992104 Z_new = -0.577000 * X + -0.672023 * Y + 0.464172 * Z + 54.546959 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.771962 0.615051 -0.966334 [DEG: -101.5259 35.2398 -55.3668 ] ZXZ: 0.990385 1.088097 -2.432126 [DEG: 56.7449 62.3433 -139.3506 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS041_2-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS041_2-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 12 2.08 26.552 18.33 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS041_2-D1 PFRMAT TS TARGET T0953s2 MODEL 2 PARENT N/A ATOM 12 N ALA 2 -7.905 19.300 -16.776 1.00 0.00 N ATOM 14 CA ALA 2 -8.848 19.409 -15.648 1.00 0.00 C ATOM 16 C ALA 2 -8.855 18.131 -14.797 1.00 0.00 C ATOM 17 O ALA 2 -8.678 17.030 -15.332 1.00 0.00 O ATOM 15 CB ALA 2 -10.254 19.706 -16.163 1.00 0.00 C ATOM 18 N VAL 3 -9.062 18.296 -13.482 1.00 0.00 N ATOM 20 CA VAL 3 -9.105 17.192 -12.499 1.00 0.00 C ATOM 24 C VAL 3 -10.569 16.825 -12.133 1.00 0.00 C ATOM 25 O VAL 3 -11.439 17.703 -12.104 1.00 0.00 O ATOM 21 CB VAL 3 -8.200 17.526 -11.223 1.00 0.00 C ATOM 22 CG1 VAL 3 -8.741 18.727 -10.421 1.00 0.00 C ATOM 23 CG2 VAL 3 -7.988 16.288 -10.335 1.00 0.00 C ATOM 26 N GLN 4 -10.806 15.532 -11.866 1.00 0.00 N ATOM 28 CA GLN 4 -12.129 14.989 -11.499 1.00 0.00 C ATOM 36 C GLN 4 -12.199 14.631 -10.010 1.00 0.00 C ATOM 37 O GLN 4 -11.179 14.278 -9.406 1.00 0.00 O ATOM 29 CB GLN 4 -12.460 13.750 -12.346 1.00 0.00 C ATOM 30 CG GLN 4 -12.716 14.033 -13.822 1.00 0.00 C ATOM 31 CD GLN 4 -13.038 12.777 -14.610 1.00 0.00 C ATOM 32 OE1 GLN 4 -12.145 12.128 -15.154 1.00 0.00 O ATOM 33 NE2 GLN 4 -14.319 12.429 -14.675 1.00 0.00 N ATOM 38 N GLY 5 -13.404 14.729 -9.435 1.00 0.00 N ATOM 40 CA GLY 5 -13.623 14.421 -8.026 1.00 0.00 C ATOM 41 C GLY 5 -14.462 13.160 -7.807 1.00 0.00 C ATOM 42 O GLY 5 -14.706 12.465 -8.800 1.00 0.00 O ATOM 43 N PRO 6 -14.906 12.810 -6.558 1.00 0.00 N ATOM 45 CA PRO 6 -14.770 13.401 -5.205 1.00 0.00 C ATOM 48 C PRO 6 -13.330 13.437 -4.642 1.00 0.00 C ATOM 49 O PRO 6 -12.427 12.827 -5.224 1.00 0.00 O ATOM 46 CB PRO 6 -15.668 12.501 -4.349 1.00 0.00 C ATOM 47 CG PRO 6 -16.711 12.053 -5.300 1.00 0.00 C ATOM 44 CD PRO 6 -15.870 11.690 -6.499 1.00 0.00 C ATOM 50 N TRP 7 -13.151 14.133 -3.503 1.00 0.00 N ATOM 52 CA TRP 7 -11.875 14.332 -2.757 1.00 0.00 C ATOM 64 C TRP 7 -10.592 14.702 -3.533 1.00 0.00 C ATOM 65 O TRP 7 -10.256 14.054 -4.530 1.00 0.00 O ATOM 53 CB TRP 7 -11.601 13.181 -1.739 1.00 0.00 C ATOM 54 CG TRP 7 -11.636 11.718 -2.269 1.00 0.00 C ATOM 58 CD1 TRP 7 -12.711 10.863 -2.239 1.00 0.00 C ATOM 55 CD2 TRP 7 -10.550 10.968 -2.860 1.00 0.00 C ATOM 59 NE1 TRP 7 -12.367 9.642 -2.767 1.00 0.00 N ATOM 56 CE2 TRP 7 -11.054 9.670 -3.156 1.00 0.00 C ATOM 57 CE3 TRP 7 -9.203 11.263 -3.168 1.00 0.00 C ATOM 61 CZ2 TRP 7 -10.258 8.660 -3.749 1.00 0.00 C ATOM 62 CZ3 TRP 7 -8.403 10.254 -3.762 1.00 0.00 C ATOM 63 CH2 TRP 7 -8.942 8.967 -4.044 1.00 0.00 C ATOM 66 N VAL 8 -9.879 15.726 -3.023 1.00 0.00 N ATOM 68 CA VAL 8 -8.611 16.311 -3.552 1.00 0.00 C ATOM 72 C VAL 8 -8.355 16.396 -5.077 1.00 0.00 C ATOM 73 O VAL 8 -8.522 15.408 -5.802 1.00 0.00 O ATOM 69 CB VAL 8 -7.309 15.791 -2.792 1.00 0.00 C ATOM 70 CG1 VAL 8 -7.283 16.337 -1.370 1.00 0.00 C ATOM 71 CG2 VAL 8 -7.220 14.252 -2.771 1.00 0.00 C ATOM 74 N GLY 9 -7.949 17.586 -5.532 1.00 0.00 N ATOM 76 CA GLY 9 -7.668 17.825 -6.941 1.00 0.00 C ATOM 77 C GLY 9 -6.890 19.111 -7.161 1.00 0.00 C ATOM 78 O GLY 9 -5.663 19.069 -7.322 1.00 0.00 O ATOM 79 N SER 10 -7.607 20.241 -7.168 1.00 0.00 N ATOM 81 CA SER 10 -7.030 21.582 -7.363 1.00 0.00 C ATOM 85 C SER 10 -7.036 22.401 -6.063 1.00 0.00 C ATOM 86 O SER 10 -7.969 22.283 -5.261 1.00 0.00 O ATOM 82 CB SER 10 -7.792 22.340 -8.458 1.00 0.00 C ATOM 83 OG SER 10 -7.714 21.661 -9.699 1.00 0.00 O ATOM 87 N SER 11 -5.988 23.226 -5.880 1.00 0.00 N ATOM 89 CA SER 11 -5.747 24.123 -4.717 1.00 0.00 C ATOM 92 C SER 11 -5.896 23.523 -3.300 1.00 0.00 C ATOM 93 O SER 11 -4.897 23.386 -2.586 1.00 0.00 O ATOM 94 CB SER 11 -6.548 25.437 -4.839 1.00 0.00 C ATOM 90 OG SER 11 -6.187 26.150 -6.010 1.00 0.00 O ATOM 95 N TYR 12 -7.137 23.156 -2.924 1.00 0.00 N ATOM 97 CA TYR 12 -7.538 22.559 -1.620 1.00 0.00 C ATOM 107 C TYR 12 -7.096 23.338 -0.353 1.00 0.00 C ATOM 108 O TYR 12 -7.947 23.899 0.344 1.00 0.00 O ATOM 98 CB TYR 12 -7.136 21.050 -1.536 1.00 0.00 C ATOM 99 CG TYR 12 -7.939 20.154 -0.578 1.00 0.00 C ATOM 100 CD1 TYR 12 -9.096 19.465 -1.017 1.00 0.00 C ATOM 102 CD2 TYR 12 -7.528 19.967 0.765 1.00 0.00 C ATOM 101 CE1 TYR 12 -9.823 18.610 -0.143 1.00 0.00 C ATOM 103 CE2 TYR 12 -8.249 19.114 1.646 1.00 0.00 C ATOM 104 CZ TYR 12 -9.392 18.443 1.183 1.00 0.00 C ATOM 105 OH TYR 12 -10.091 17.618 2.035 1.00 0.00 O ATOM 109 N VAL 13 -5.772 23.386 -0.104 1.00 0.00 N ATOM 111 CA VAL 13 -5.080 24.057 1.036 1.00 0.00 C ATOM 115 C VAL 13 -5.707 23.885 2.456 1.00 0.00 C ATOM 116 O VAL 13 -6.897 24.166 2.653 1.00 0.00 O ATOM 112 CB VAL 13 -4.689 25.582 0.687 1.00 0.00 C ATOM 113 CG1 VAL 13 -5.923 26.498 0.602 1.00 0.00 C ATOM 114 CG2 VAL 13 -3.631 26.135 1.650 1.00 0.00 C ATOM 117 N ALA 14 -4.885 23.427 3.412 1.00 0.00 N ATOM 119 CA ALA 14 -5.296 23.203 4.810 1.00 0.00 C ATOM 121 C ALA 14 -4.360 23.878 5.831 1.00 0.00 C ATOM 122 O ALA 14 -4.733 24.895 6.429 1.00 0.00 O ATOM 120 CB ALA 14 -5.423 21.691 5.102 1.00 0.00 C ATOM 123 N GLU 15 -3.159 23.306 6.020 1.00 0.00 N ATOM 125 CA GLU 15 -2.127 23.790 6.966 1.00 0.00 C ATOM 131 C GLU 15 -1.439 25.127 6.624 1.00 0.00 C ATOM 132 O GLU 15 -1.291 25.982 7.505 1.00 0.00 O ATOM 126 CB GLU 15 -1.062 22.707 7.201 1.00 0.00 C ATOM 127 CG GLU 15 -1.552 21.487 7.978 1.00 0.00 C ATOM 128 CD GLU 15 -0.465 20.449 8.184 1.00 0.00 C ATOM 129 OE1 GLU 15 -0.323 19.554 7.323 1.00 0.00 O ATOM 130 OE2 GLU 15 0.247 20.526 9.208 1.00 0.00 O ATOM 133 N THR 16 -1.028 25.291 5.357 1.00 0.00 N ATOM 135 CA THR 16 -0.339 26.499 4.848 1.00 0.00 C ATOM 140 C THR 16 -1.203 27.776 4.779 1.00 0.00 C ATOM 141 O THR 16 -0.713 28.875 5.073 1.00 0.00 O ATOM 136 CB THR 16 0.332 26.240 3.465 1.00 0.00 C ATOM 137 OG1 THR 16 -0.621 25.667 2.562 1.00 0.00 O ATOM 139 CG2 THR 16 1.528 25.304 3.608 1.00 0.00 C ATOM 142 N GLY 17 -2.482 27.611 4.422 1.00 0.00 N ATOM 144 CA GLY 17 -3.408 28.732 4.317 1.00 0.00 C ATOM 145 C GLY 17 -4.568 28.645 5.294 1.00 0.00 C ATOM 146 O GLY 17 -4.462 27.955 6.312 1.00 0.00 O ATOM 147 N GLN 18 -5.677 29.324 4.948 1.00 0.00 N ATOM 149 CA GLN 18 -6.954 29.422 5.708 1.00 0.00 C ATOM 157 C GLN 18 -6.961 29.494 7.258 1.00 0.00 C ATOM 158 O GLN 18 -7.460 30.476 7.822 1.00 0.00 O ATOM 150 CB GLN 18 -8.025 28.422 5.186 1.00 0.00 C ATOM 151 CG GLN 18 -7.647 26.926 5.139 1.00 0.00 C ATOM 152 CD GLN 18 -8.780 26.054 4.630 1.00 0.00 C ATOM 153 OE1 GLN 18 -9.565 25.519 5.413 1.00 0.00 O ATOM 154 NE2 GLN 18 -8.870 25.905 3.313 1.00 0.00 N ATOM 159 N ASN 19 -6.412 28.462 7.916 1.00 0.00 N ATOM 161 CA ASN 19 -6.338 28.360 9.386 1.00 0.00 C ATOM 168 C ASN 19 -4.992 28.896 9.925 1.00 0.00 C ATOM 169 O ASN 19 -4.894 29.254 11.107 1.00 0.00 O ATOM 162 CB ASN 19 -6.549 26.892 9.813 1.00 0.00 C ATOM 163 CG ASN 19 -7.173 26.755 11.204 1.00 0.00 C ATOM 164 OD1 ASN 19 -6.465 26.673 12.209 1.00 0.00 O ATOM 165 ND2 ASN 19 -8.502 26.714 11.259 1.00 0.00 N ATOM 170 N TRP 20 -3.988 28.981 9.039 1.00 0.00 N ATOM 172 CA TRP 20 -2.624 29.463 9.349 1.00 0.00 C ATOM 184 C TRP 20 -2.583 30.971 9.683 1.00 0.00 C ATOM 185 O TRP 20 -1.821 31.389 10.564 1.00 0.00 O ATOM 173 CB TRP 20 -1.672 29.144 8.171 1.00 0.00 C ATOM 174 CG TRP 20 -0.141 29.086 8.502 1.00 0.00 C ATOM 178 CD1 TRP 20 0.797 30.110 8.333 1.00 0.00 C ATOM 175 CD2 TRP 20 0.646 27.921 9.032 1.00 0.00 C ATOM 179 NE1 TRP 20 2.047 29.645 8.758 1.00 0.00 N ATOM 176 CE2 TRP 20 1.920 28.333 9.187 1.00 0.00 C ATOM 177 CE3 TRP 20 1.062 27.206 10.231 1.00 0.00 C ATOM 181 CZ2 TRP 20 1.861 27.412 10.277 1.00 0.00 C ATOM 182 CZ3 TRP 20 2.030 27.971 9.355 1.00 0.00 C ATOM 183 CH2 TRP 20 0.888 27.551 9.226 1.00 0.00 C ATOM 186 N ALA 21 -3.413 31.758 8.980 1.00 0.00 N ATOM 188 CA ALA 21 -3.526 33.222 9.151 1.00 0.00 C ATOM 190 C ALA 21 -4.129 33.618 10.512 1.00 0.00 C ATOM 191 O ALA 21 -3.665 34.576 11.142 1.00 0.00 O ATOM 189 CB ALA 21 -4.351 33.819 8.017 1.00 0.00 C ATOM 192 N SER 22 -5.142 32.856 10.952 1.00 0.00 N ATOM 194 CA SER 22 -5.847 33.055 12.236 1.00 0.00 C ATOM 198 C SER 22 -4.935 32.731 13.437 1.00 0.00 C ATOM 199 O SER 22 -4.881 33.505 14.400 1.00 0.00 O ATOM 195 CB SER 22 -7.123 32.200 12.281 1.00 0.00 C ATOM 196 OG SER 22 -7.925 32.509 13.410 1.00 0.00 O ATOM 200 N LEU 23 -4.196 31.613 13.338 1.00 0.00 N ATOM 202 CA LEU 23 -3.255 31.141 14.377 1.00 0.00 C ATOM 207 C LEU 23 -2.038 32.072 14.516 1.00 0.00 C ATOM 208 O LEU 23 -1.607 32.363 15.637 1.00 0.00 O ATOM 203 CB LEU 23 -2.786 29.700 14.085 1.00 0.00 C ATOM 204 CG LEU 23 -3.726 28.481 14.170 1.00 0.00 C ATOM 205 CD1 LEU 23 -3.275 27.445 13.153 1.00 0.00 C ATOM 206 CD2 LEU 23 -3.773 27.860 15.579 1.00 0.00 C ATOM 209 N ALA 24 -1.526 32.552 13.372 1.00 0.00 N ATOM 211 CA ALA 24 -0.373 33.472 13.289 1.00 0.00 C ATOM 213 C ALA 24 -0.718 34.863 13.849 1.00 0.00 C ATOM 214 O ALA 24 0.110 35.483 14.528 1.00 0.00 O ATOM 212 CB ALA 24 0.104 33.589 11.847 1.00 0.00 C ATOM 215 N ALA 25 -1.955 35.312 13.583 1.00 0.00 N ATOM 217 CA ALA 25 -2.495 36.612 14.034 1.00 0.00 C ATOM 219 C ALA 25 -2.689 36.662 15.559 1.00 0.00 C ATOM 220 O ALA 25 -2.318 37.655 16.196 1.00 0.00 O ATOM 218 CB ALA 25 -3.811 36.910 13.321 1.00 0.00 C ATOM 221 N ASN 26 -3.272 35.593 16.123 1.00 0.00 N ATOM 223 CA ASN 26 -3.520 35.444 17.572 1.00 0.00 C ATOM 230 C ASN 26 -2.234 35.259 18.400 1.00 0.00 C ATOM 231 O ASN 26 -2.112 35.838 19.485 1.00 0.00 O ATOM 224 CB ASN 26 -4.500 34.293 17.846 1.00 0.00 C ATOM 225 CG ASN 26 -5.958 34.702 17.670 1.00 0.00 C ATOM 226 OD1 ASN 26 -6.610 35.139 18.622 1.00 0.00 O ATOM 227 ND2 ASN 26 -6.481 34.546 16.457 1.00 0.00 N ATOM 232 N GLU 27 -1.295 34.455 17.876 1.00 0.00 N ATOM 234 CA GLU 27 0.010 34.162 18.511 1.00 0.00 C ATOM 239 C GLU 27 0.990 35.350 18.550 1.00 0.00 C ATOM 240 O GLU 27 1.715 35.518 19.537 1.00 0.00 O ATOM 241 CB GLU 27 0.683 32.954 17.847 1.00 0.00 C ATOM 235 CG GLU 27 0.086 31.606 18.239 1.00 0.00 C ATOM 236 CD GLU 27 0.780 30.439 17.560 1.00 0.00 C ATOM 237 OE1 GLU 27 1.757 29.911 18.131 1.00 0.00 O ATOM 238 OE2 GLU 27 0.346 30.048 16.455 1.00 0.00 O ATOM 242 N LEU 28 0.998 36.160 17.480 1.00 0.00 N ATOM 244 CA LEU 28 1.867 37.349 17.334 1.00 0.00 C ATOM 249 C LEU 28 1.495 38.490 18.308 1.00 0.00 C ATOM 250 O LEU 28 2.388 39.127 18.877 1.00 0.00 O ATOM 245 CB LEU 28 1.840 37.851 15.859 1.00 0.00 C ATOM 246 CG LEU 28 2.850 38.692 15.013 1.00 0.00 C ATOM 247 CD1 LEU 28 2.964 40.148 15.491 1.00 0.00 C ATOM 248 CD2 LEU 28 4.236 38.034 14.898 1.00 0.00 C ATOM 251 N ARG 29 0.179 38.702 18.495 1.00 0.00 N ATOM 253 CA ARG 29 -0.459 39.727 19.371 1.00 0.00 C ATOM 266 C ARG 29 0.255 41.070 19.675 1.00 0.00 C ATOM 267 O ARG 29 1.375 41.078 20.206 1.00 0.00 O ATOM 254 CB ARG 29 -1.033 39.093 20.669 1.00 0.00 C ATOM 255 CG ARG 29 -0.070 38.238 21.528 1.00 0.00 C ATOM 256 CD ARG 29 -0.752 37.671 22.772 1.00 0.00 C ATOM 257 NE ARG 29 -1.084 38.704 23.759 1.00 0.00 N ATOM 259 CZ ARG 29 -1.686 38.483 24.928 1.00 0.00 C ATOM 260 NH1 ARG 29 -1.933 39.504 25.738 1.00 0.00 N ATOM 263 NH2 ARG 29 -2.045 37.258 25.298 1.00 0.00 N ATOM 268 N VAL 30 -0.414 42.183 19.340 1.00 0.00 N ATOM 270 CA VAL 30 0.094 43.554 19.546 1.00 0.00 C ATOM 274 C VAL 30 -0.469 44.178 20.853 1.00 0.00 C ATOM 275 O VAL 30 -1.644 43.974 21.184 1.00 0.00 O ATOM 271 CB VAL 30 -0.156 44.460 18.252 1.00 0.00 C ATOM 272 CG1 VAL 30 -1.659 44.680 17.974 1.00 0.00 C ATOM 273 CG2 VAL 30 0.618 45.787 18.324 1.00 0.00 C ATOM 276 N THR 31 0.391 44.914 21.575 1.00 0.00 N ATOM 278 CA THR 31 0.050 45.587 22.845 1.00 0.00 C ATOM 283 C THR 31 -0.190 47.107 22.671 1.00 0.00 C ATOM 284 O THR 31 -1.079 47.673 23.321 1.00 0.00 O ATOM 279 CB THR 31 1.124 45.283 23.978 1.00 0.00 C ATOM 280 OG1 THR 31 0.819 46.033 25.163 1.00 0.00 O ATOM 282 CG2 THR 31 2.568 45.587 23.519 1.00 0.00 C ATOM 285 N GLU 32 0.596 47.734 21.784 1.00 0.00 N ATOM 287 CA GLU 32 0.518 49.177 21.485 1.00 0.00 C ATOM 293 C GLU 32 -0.234 49.507 20.179 1.00 0.00 C ATOM 294 O GLU 32 -0.105 48.779 19.188 1.00 0.00 O ATOM 288 CB GLU 32 1.930 49.826 21.496 1.00 0.00 C ATOM 289 CG GLU 32 3.076 49.109 20.719 1.00 0.00 C ATOM 290 CD GLU 32 3.278 49.639 19.303 1.00 0.00 C ATOM 291 OE1 GLU 32 2.631 49.115 18.372 1.00 0.00 O ATOM 292 OE2 GLU 32 4.083 50.578 19.128 1.00 0.00 O ATOM 295 N ARG 33 -1.008 50.601 20.205 1.00 0.00 N ATOM 297 CA ARG 33 -1.803 51.080 19.058 1.00 0.00 C ATOM 310 C ARG 33 -1.181 52.278 18.285 1.00 0.00 C ATOM 311 O ARG 33 -1.290 52.299 17.053 1.00 0.00 O ATOM 298 CB ARG 33 -3.241 51.419 19.486 1.00 0.00 C ATOM 299 CG ARG 33 -4.088 50.216 19.889 1.00 0.00 C ATOM 300 CD ARG 33 -5.490 50.641 20.300 1.00 0.00 C ATOM 301 NE ARG 33 -6.320 49.500 20.691 1.00 0.00 N ATOM 303 CZ ARG 33 -7.586 49.576 21.101 1.00 0.00 C ATOM 304 NH1 ARG 33 -8.214 50.745 21.187 1.00 0.00 N ATOM 307 NH2 ARG 33 -8.235 48.467 21.429 1.00 0.00 N ATOM 312 N PRO 34 -0.541 53.290 18.968 1.00 0.00 N ATOM 314 CA PRO 34 -0.226 53.635 20.378 1.00 0.00 C ATOM 317 C PRO 34 -1.424 53.993 21.294 1.00 0.00 C ATOM 318 O PRO 34 -2.494 54.362 20.795 1.00 0.00 O ATOM 315 CB PRO 34 0.766 54.799 20.238 1.00 0.00 C ATOM 316 CG PRO 34 0.401 55.433 18.926 1.00 0.00 C ATOM 313 CD PRO 34 0.176 54.221 18.064 1.00 0.00 C ATOM 319 N PHE 35 -1.217 53.879 22.613 1.00 0.00 N ATOM 321 CA PHE 35 -2.236 54.174 23.639 1.00 0.00 C ATOM 329 C PHE 35 -2.069 55.554 24.315 1.00 0.00 C ATOM 330 O PHE 35 -2.967 56.398 24.210 1.00 0.00 O ATOM 322 CB PHE 35 -2.318 53.023 24.692 1.00 0.00 C ATOM 323 CG PHE 35 -0.966 52.450 25.143 1.00 0.00 C ATOM 324 CD1 PHE 35 -0.376 51.362 24.457 1.00 0.00 C ATOM 325 CD2 PHE 35 -0.299 52.971 26.278 1.00 0.00 C ATOM 326 CE1 PHE 35 0.856 50.799 24.892 1.00 0.00 C ATOM 327 CE2 PHE 35 0.933 52.419 26.724 1.00 0.00 C ATOM 328 CZ PHE 35 1.512 51.331 26.028 1.00 0.00 C ATOM 331 N TRP 36 -0.931 55.765 24.994 1.00 0.00 N ATOM 333 CA TRP 36 -0.602 57.025 25.689 1.00 0.00 C ATOM 345 C TRP 36 0.775 57.555 25.266 1.00 0.00 C ATOM 346 O TRP 36 1.711 56.770 25.069 1.00 0.00 O ATOM 334 CB TRP 36 -0.649 56.852 27.228 1.00 0.00 C ATOM 335 CG TRP 36 -2.048 56.977 27.885 1.00 0.00 C ATOM 339 CD1 TRP 36 -2.636 58.133 28.348 1.00 0.00 C ATOM 336 CD2 TRP 36 -2.983 55.914 28.181 1.00 0.00 C ATOM 340 NE1 TRP 36 -3.862 57.858 28.904 1.00 0.00 N ATOM 337 CE2 TRP 36 -4.106 56.514 28.820 1.00 0.00 C ATOM 338 CE3 TRP 36 -2.984 54.516 27.972 1.00 0.00 C ATOM 342 CZ2 TRP 36 -5.227 55.764 29.255 1.00 0.00 C ATOM 343 CZ3 TRP 36 -4.105 53.763 28.406 1.00 0.00 C ATOM 344 CH2 TRP 36 -5.209 54.398 29.040 1.00 0.00 C ATOM 347 N ILE 37 0.874 58.885 25.117 1.00 0.00 N ATOM 349 CA ILE 37 2.104 59.605 24.715 1.00 0.00 C ATOM 354 C ILE 37 3.220 59.584 25.804 1.00 0.00 C ATOM 355 O ILE 37 4.406 59.476 25.471 1.00 0.00 O ATOM 350 CB ILE 37 1.753 61.078 24.200 1.00 0.00 C ATOM 352 CG1 ILE 37 2.961 61.733 23.496 1.00 0.00 C ATOM 351 CG2 ILE 37 1.140 61.947 25.341 1.00 0.00 C ATOM 353 CD1 ILE 37 2.612 62.673 22.334 1.00 0.00 C ATOM 356 N SER 38 2.808 59.681 27.076 1.00 0.00 N ATOM 358 CA SER 38 3.703 59.688 28.254 1.00 0.00 C ATOM 362 C SER 38 4.424 58.355 28.533 1.00 0.00 C ATOM 363 O SER 38 5.593 58.358 28.939 1.00 0.00 O ATOM 359 CB SER 38 2.931 60.128 29.502 1.00 0.00 C ATOM 360 OG SER 38 2.402 61.434 29.344 1.00 0.00 O ATOM 364 N SER 39 3.720 57.236 28.307 1.00 0.00 N ATOM 366 CA SER 39 4.229 55.862 28.512 1.00 0.00 C ATOM 370 C SER 39 5.333 55.455 27.513 1.00 0.00 C ATOM 371 O SER 39 6.282 54.756 27.889 1.00 0.00 O ATOM 367 CB SER 39 3.071 54.856 28.460 1.00 0.00 C ATOM 368 OG SER 39 3.478 53.560 28.869 1.00 0.00 O ATOM 372 N PHE 40 5.188 55.900 26.256 1.00 0.00 N ATOM 374 CA PHE 40 6.129 55.628 25.146 1.00 0.00 C ATOM 382 C PHE 40 7.488 56.340 25.327 1.00 0.00 C ATOM 383 O PHE 40 8.534 55.764 25.007 1.00 0.00 O ATOM 375 CB PHE 40 5.481 56.031 23.792 1.00 0.00 C ATOM 376 CG PHE 40 5.999 55.263 22.571 1.00 0.00 C ATOM 377 CD1 PHE 40 7.094 55.752 21.818 1.00 0.00 C ATOM 378 CD2 PHE 40 5.370 54.067 22.146 1.00 0.00 C ATOM 379 CE1 PHE 40 7.557 55.065 20.661 1.00 0.00 C ATOM 380 CE2 PHE 40 5.822 53.369 20.991 1.00 0.00 C ATOM 381 CZ PHE 40 6.918 53.870 20.248 1.00 0.00 C ATOM 384 N ILE 41 7.443 57.573 25.867 1.00 0.00 N ATOM 386 CA ILE 41 8.588 58.486 26.147 1.00 0.00 C ATOM 391 C ILE 41 9.655 58.639 25.022 1.00 0.00 C ATOM 392 O ILE 41 10.286 57.656 24.611 1.00 0.00 O ATOM 387 CB ILE 41 9.211 58.249 27.621 1.00 0.00 C ATOM 389 CG1 ILE 41 10.045 59.464 28.082 1.00 0.00 C ATOM 388 CG2 ILE 41 9.995 56.908 27.702 1.00 0.00 C ATOM 390 CD1 ILE 41 9.951 59.790 29.578 1.00 0.00 C ATOM 393 N GLY 42 9.819 59.875 24.544 1.00 0.00 N ATOM 395 CA GLY 42 10.778 60.182 23.490 1.00 0.00 C ATOM 396 C GLY 42 10.478 61.505 22.807 1.00 0.00 C ATOM 397 O GLY 42 11.294 61.993 22.016 1.00 0.00 O ATOM 398 N ARG 43 9.307 62.075 23.120 1.00 0.00 N ATOM 400 CA ARG 43 8.829 63.354 22.565 1.00 0.00 C ATOM 413 C ARG 43 8.898 64.480 23.615 1.00 0.00 C ATOM 414 O ARG 43 9.108 64.201 24.802 1.00 0.00 O ATOM 401 CB ARG 43 7.390 63.209 22.039 1.00 0.00 C ATOM 402 CG ARG 43 7.251 62.334 20.790 1.00 0.00 C ATOM 403 CD ARG 43 5.805 62.251 20.300 1.00 0.00 C ATOM 404 NE ARG 43 5.323 63.515 19.734 1.00 0.00 N ATOM 406 CZ ARG 43 4.114 63.708 19.206 1.00 0.00 C ATOM 407 NH1 ARG 43 3.794 64.902 18.724 1.00 0.00 N ATOM 410 NH2 ARG 43 3.221 62.724 19.151 1.00 0.00 N ATOM 415 N SER 44 8.720 65.732 23.167 1.00 0.00 N ATOM 417 CA SER 44 8.752 66.938 24.016 1.00 0.00 C ATOM 421 C SER 44 7.379 67.270 24.638 1.00 0.00 C ATOM 422 O SER 44 6.352 66.767 24.167 1.00 0.00 O ATOM 418 CB SER 44 9.279 68.133 23.209 1.00 0.00 C ATOM 419 OG SER 44 8.533 68.325 22.018 1.00 0.00 O ATOM 423 N LYS 45 7.381 68.111 25.684 1.00 0.00 N ATOM 425 CA LYS 45 6.169 68.539 26.413 1.00 0.00 C ATOM 433 C LYS 45 5.486 69.769 25.790 1.00 0.00 C ATOM 434 O LYS 45 6.167 70.663 25.269 1.00 0.00 O ATOM 435 CB LYS 45 6.497 68.819 27.886 1.00 0.00 C ATOM 426 CG LYS 45 6.877 67.588 28.703 1.00 0.00 C ATOM 427 CD LYS 45 7.196 67.957 30.146 1.00 0.00 C ATOM 428 CE LYS 45 7.581 66.738 30.983 1.00 0.00 C ATOM 429 NZ LYS 45 6.447 65.795 31.223 1.00 0.00 N TER END