####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS023_5-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS023_5-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 25 17 - 41 4.83 12.95 LCS_AVERAGE: 50.46 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 9 - 20 1.92 17.53 LCS_AVERAGE: 20.35 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 20 - 29 0.54 13.34 LCS_AVERAGE: 15.96 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 5 6 9 4 5 5 5 5 6 6 6 8 8 9 9 11 18 19 20 20 20 21 21 LCS_GDT V 3 V 3 5 6 9 4 5 5 5 5 6 6 6 8 8 9 9 16 18 19 20 20 23 23 24 LCS_GDT Q 4 Q 4 5 6 18 4 5 5 5 5 6 10 10 12 15 15 17 19 19 19 22 24 25 27 28 LCS_GDT G 5 G 5 5 6 20 4 5 5 5 5 6 6 9 14 15 16 18 22 24 25 26 28 31 34 36 LCS_GDT P 6 P 6 5 6 20 3 5 5 6 7 11 13 13 15 17 18 19 22 24 25 28 30 32 34 36 LCS_GDT W 7 W 7 4 6 20 3 3 4 6 10 12 13 14 15 17 18 19 22 24 25 29 30 32 34 36 LCS_GDT V 8 V 8 4 11 20 3 3 4 7 10 12 13 14 15 17 18 21 24 26 28 29 31 32 34 36 LCS_GDT G 9 G 9 9 12 20 4 8 9 10 10 12 13 14 15 17 19 21 24 26 28 29 31 32 34 36 LCS_GDT S 10 S 10 9 12 20 5 8 9 10 11 12 13 14 15 17 19 21 24 26 28 29 31 32 34 36 LCS_GDT S 11 S 11 9 12 20 5 8 9 10 11 12 13 14 15 17 18 21 22 25 28 29 31 32 34 36 LCS_GDT Y 12 Y 12 9 12 20 5 8 9 10 11 12 13 14 15 17 18 21 24 26 28 29 31 32 34 36 LCS_GDT V 13 V 13 9 12 20 5 8 9 10 11 12 13 16 17 19 20 21 24 26 28 29 31 32 34 36 LCS_GDT A 14 A 14 9 12 20 5 8 9 10 11 12 13 14 16 17 19 21 24 26 28 29 31 32 34 36 LCS_GDT E 15 E 15 9 12 20 4 8 9 10 11 12 13 14 15 16 18 20 24 26 28 29 31 32 34 36 LCS_GDT T 16 T 16 9 12 22 4 8 9 10 11 12 13 14 15 17 18 20 24 26 28 29 31 32 34 36 LCS_GDT G 17 G 17 9 12 25 4 6 9 10 11 12 13 16 17 19 20 21 24 26 28 29 31 32 34 36 LCS_GDT Q 18 Q 18 9 12 25 4 6 9 10 11 12 13 15 16 19 20 22 23 25 27 29 31 32 34 36 LCS_GDT N 19 N 19 7 12 25 3 5 7 7 11 12 13 14 15 17 20 22 23 24 25 27 27 31 33 36 LCS_GDT W 20 W 20 10 12 25 7 10 10 10 11 12 13 14 15 17 19 22 23 24 25 26 27 30 32 34 LCS_GDT A 21 A 21 10 11 25 7 10 10 10 10 10 13 15 17 19 20 22 24 26 28 29 31 32 34 36 LCS_GDT S 22 S 22 10 11 25 7 10 10 10 10 10 11 11 14 16 20 22 23 26 28 29 31 32 34 36 LCS_GDT L 23 L 23 10 11 25 7 10 10 10 10 10 11 13 16 19 20 22 24 26 28 29 31 32 34 36 LCS_GDT A 24 A 24 10 11 25 7 10 10 10 10 10 12 16 17 19 20 22 24 26 28 29 31 32 34 36 LCS_GDT A 25 A 25 10 11 25 7 10 10 10 10 11 13 16 17 19 20 22 24 26 28 29 31 32 34 36 LCS_GDT N 26 N 26 10 11 25 7 10 10 10 10 11 13 16 17 19 20 22 24 26 28 29 31 32 34 36 LCS_GDT E 27 E 27 10 11 25 7 10 10 10 10 10 11 11 12 17 20 22 23 25 26 29 31 32 34 36 LCS_GDT L 28 L 28 10 11 25 7 10 10 10 10 10 11 11 12 15 17 20 21 25 26 26 28 30 34 35 LCS_GDT R 29 R 29 10 11 25 5 10 10 10 10 10 11 14 15 17 19 22 23 23 26 26 28 30 31 32 LCS_GDT V 30 V 30 5 6 25 3 4 5 5 6 9 12 14 15 17 20 22 23 25 26 26 30 32 34 36 LCS_GDT T 31 T 31 5 6 25 3 4 5 6 7 10 12 15 16 18 20 22 23 25 26 29 31 32 34 36 LCS_GDT E 32 E 32 5 6 25 3 4 5 6 10 11 13 16 17 19 20 22 24 26 28 29 31 32 34 36 LCS_GDT R 33 R 33 5 6 25 3 4 5 7 10 11 13 16 17 19 20 22 24 26 28 29 31 32 34 36 LCS_GDT P 34 P 34 5 6 25 3 4 5 5 8 11 13 16 17 19 20 22 24 26 28 29 31 32 33 36 LCS_GDT F 35 F 35 3 7 25 3 3 5 7 10 11 13 16 17 19 20 22 24 26 28 29 31 32 34 36 LCS_GDT W 36 W 36 6 7 25 4 5 6 7 8 11 13 16 17 19 20 22 24 26 28 29 31 32 34 36 LCS_GDT I 37 I 37 6 7 25 4 5 6 7 10 11 13 16 17 19 20 22 24 26 28 29 31 32 34 36 LCS_GDT S 38 S 38 6 7 25 4 5 6 7 10 11 13 16 17 19 20 22 24 26 28 29 31 32 33 36 LCS_GDT S 39 S 39 6 7 25 4 5 6 7 10 11 13 16 17 19 20 22 24 26 28 29 31 32 34 36 LCS_GDT F 40 F 40 6 7 25 4 5 6 7 10 11 13 16 17 19 20 22 24 26 28 29 31 32 34 36 LCS_GDT I 41 I 41 6 7 25 3 4 6 7 10 11 13 16 17 19 20 21 24 26 28 29 31 32 34 36 LCS_GDT G 42 G 42 4 7 24 3 4 5 6 7 10 12 16 17 19 20 21 24 26 28 29 31 32 34 36 LCS_GDT R 43 R 43 4 6 20 3 4 5 6 6 6 9 10 12 14 16 20 23 26 28 29 31 32 34 36 LCS_GDT S 44 S 44 4 6 15 3 4 5 6 6 6 9 10 12 13 13 14 14 14 24 25 27 30 33 36 LCS_GDT K 45 K 45 3 6 15 3 3 5 6 6 6 9 10 12 13 13 14 14 14 15 16 16 25 25 27 LCS_AVERAGE LCS_A: 28.93 ( 15.96 20.35 50.46 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 10 10 10 11 12 13 16 17 19 20 22 24 26 28 29 31 32 34 36 GDT PERCENT_AT 15.91 22.73 22.73 22.73 25.00 27.27 29.55 36.36 38.64 43.18 45.45 50.00 54.55 59.09 63.64 65.91 70.45 72.73 77.27 81.82 GDT RMS_LOCAL 0.22 0.54 0.54 0.54 1.80 1.92 2.14 2.92 3.07 3.40 3.54 4.26 4.71 4.92 5.29 5.48 5.75 5.91 6.90 6.94 GDT RMS_ALL_AT 13.60 13.34 13.34 13.34 17.18 17.53 16.60 11.56 11.68 11.82 11.90 13.55 10.85 10.94 10.69 10.66 10.63 10.63 9.75 9.86 # Checking swapping # possible swapping detected: E 15 E 15 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 30.739 0 0.065 0.108 33.380 0.000 0.000 - LGA V 3 V 3 25.778 0 0.071 0.086 27.035 0.000 0.000 22.200 LGA Q 4 Q 4 25.250 0 0.066 0.855 31.577 0.000 0.000 31.577 LGA G 5 G 5 20.881 0 0.017 0.017 24.066 0.000 0.000 - LGA P 6 P 6 19.801 0 0.706 0.556 21.708 0.000 0.000 20.118 LGA W 7 W 7 17.637 0 0.359 1.331 22.911 0.000 0.000 22.329 LGA V 8 V 8 11.468 0 0.064 0.144 13.739 0.000 0.000 8.154 LGA G 9 G 9 9.640 0 0.503 0.503 10.837 0.000 0.000 - LGA S 10 S 10 10.406 0 0.022 0.170 15.101 0.000 0.000 15.101 LGA S 11 S 11 13.242 0 0.049 0.069 17.138 0.000 0.000 17.138 LGA Y 12 Y 12 9.136 0 0.054 1.204 10.095 0.000 0.000 9.599 LGA V 13 V 13 2.724 0 0.042 0.109 4.944 22.727 19.221 4.266 LGA A 14 A 14 7.005 0 0.025 0.032 9.993 0.000 0.000 - LGA E 15 E 15 9.107 0 0.053 1.342 16.809 0.000 0.000 16.809 LGA T 16 T 16 6.952 0 0.139 1.136 8.258 0.000 0.000 7.094 LGA G 17 G 17 3.515 0 0.076 0.076 7.352 7.273 7.273 - LGA Q 18 Q 18 6.743 0 0.110 1.140 11.976 0.909 0.404 11.976 LGA N 19 N 19 10.420 0 0.070 1.387 15.200 0.000 0.000 13.658 LGA W 20 W 20 10.847 0 0.612 1.464 17.203 0.000 0.000 17.203 LGA A 21 A 21 5.121 0 0.060 0.056 7.407 5.000 4.000 - LGA S 22 S 22 7.177 0 0.025 0.610 10.156 1.364 0.909 10.156 LGA L 23 L 23 6.288 0 0.048 0.115 13.571 1.818 0.909 13.571 LGA A 24 A 24 4.252 0 0.032 0.037 4.890 7.727 7.273 - LGA A 25 A 25 3.332 0 0.021 0.029 5.658 23.636 19.273 - LGA N 26 N 26 2.126 0 0.026 1.188 5.636 23.636 27.955 3.058 LGA E 27 E 27 7.530 0 0.054 1.177 11.742 0.000 0.000 11.742 LGA L 28 L 28 10.184 0 0.257 0.239 12.276 0.000 0.000 9.524 LGA R 29 R 29 10.693 0 0.276 1.625 15.947 0.000 0.000 15.947 LGA V 30 V 30 8.453 0 0.582 1.186 8.872 0.000 0.000 8.326 LGA T 31 T 31 6.262 0 0.319 0.950 9.392 5.909 3.377 8.915 LGA E 32 E 32 2.212 0 0.041 0.886 4.470 41.364 24.848 4.088 LGA R 33 R 33 2.394 0 0.030 1.577 12.501 28.636 10.413 12.501 LGA P 34 P 34 3.662 0 0.658 0.637 5.347 8.182 7.273 4.642 LGA F 35 F 35 2.547 0 0.650 1.407 9.801 28.636 10.579 9.801 LGA W 36 W 36 3.967 0 0.631 1.296 14.177 24.545 7.013 14.177 LGA I 37 I 37 2.923 0 0.096 0.403 3.585 33.636 31.591 1.539 LGA S 38 S 38 1.354 0 0.100 0.635 2.798 70.000 59.697 2.798 LGA S 39 S 39 1.371 0 0.193 0.545 4.538 56.364 44.242 4.538 LGA F 40 F 40 2.060 0 0.083 1.092 9.665 63.182 23.967 9.665 LGA I 41 I 41 1.857 0 0.603 0.507 4.678 44.091 26.591 4.678 LGA G 42 G 42 4.131 0 0.137 0.137 8.353 5.909 5.909 - LGA R 43 R 43 10.354 0 0.051 1.404 16.296 0.000 0.000 16.296 LGA S 44 S 44 16.444 0 0.062 0.670 18.507 0.000 0.000 18.507 LGA K 45 K 45 20.900 0 0.584 1.227 27.412 0.000 0.000 27.412 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 9.299 9.235 10.389 11.467 7.789 3.221 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 16 2.92 36.932 32.081 0.529 LGA_LOCAL RMSD: 2.923 Number of atoms: 16 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 11.564 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 9.299 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.187300 * X + 0.899524 * Y + -0.394684 * Z + -20.468748 Y_new = -0.941462 * X + -0.279037 * Y + -0.189176 * Z + 52.039536 Z_new = -0.280300 * X + 0.336147 * Y + 0.899131 * Z + 10.882591 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.767178 0.284106 0.357769 [DEG: -101.2519 16.2781 20.4986 ] ZXZ: -1.123838 0.453016 -0.695049 [DEG: -64.3912 25.9559 -39.8234 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS023_5-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS023_5-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 16 2.92 32.081 9.30 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS023_5-D1 PFRMAT TS TARGET T0953s2 MODEL 5 PARENT N/A ATOM 9 N ALA 2 -20.160 45.338 10.821 1.00 11.48 ATOM 10 CA ALA 2 -18.948 44.630 11.082 1.00 11.48 ATOM 11 CB ALA 2 -19.129 43.424 12.021 1.00 11.48 ATOM 12 C ALA 2 -18.408 44.121 9.787 1.00 11.48 ATOM 13 O ALA 2 -19.154 43.639 8.938 1.00 11.48 ATOM 14 N VAL 3 -17.075 44.215 9.615 1.00 11.49 ATOM 15 CA VAL 3 -16.437 43.741 8.423 1.00 11.49 ATOM 16 CB VAL 3 -15.465 44.722 7.837 1.00 11.49 ATOM 17 CG1 VAL 3 -14.726 44.040 6.673 1.00 11.49 ATOM 18 CG2 VAL 3 -16.236 45.991 7.435 1.00 11.49 ATOM 19 C VAL 3 -15.663 42.522 8.813 1.00 11.49 ATOM 20 O VAL 3 -15.053 42.480 9.881 1.00 11.49 ATOM 21 N GLN 4 -15.678 41.485 7.952 1.00 9.77 ATOM 22 CA GLN 4 -15.010 40.262 8.302 1.00 9.77 ATOM 23 CB GLN 4 -15.961 39.052 8.333 1.00 9.77 ATOM 24 CG GLN 4 -15.283 37.731 8.701 1.00 9.77 ATOM 25 CD GLN 4 -16.355 36.649 8.697 1.00 9.77 ATOM 26 OE1 GLN 4 -17.547 36.937 8.607 1.00 9.77 ATOM 27 NE2 GLN 4 -15.922 35.363 8.800 1.00 9.77 ATOM 28 C GLN 4 -13.941 39.981 7.294 1.00 9.77 ATOM 29 O GLN 4 -14.177 40.039 6.089 1.00 9.77 ATOM 30 N GLY 5 -12.723 39.667 7.783 1.00 10.86 ATOM 31 CA GLY 5 -11.620 39.379 6.911 1.00 10.86 ATOM 32 C GLY 5 -11.651 37.927 6.549 1.00 10.86 ATOM 33 O GLY 5 -12.400 37.132 7.114 1.00 10.86 ATOM 34 N PRO 6 -10.818 37.585 5.601 1.00 9.84 ATOM 35 CA PRO 6 -10.708 36.228 5.134 1.00 9.84 ATOM 36 CD PRO 6 -10.411 38.542 4.589 1.00 9.84 ATOM 37 CB PRO 6 -10.088 36.305 3.737 1.00 9.84 ATOM 38 CG PRO 6 -9.513 37.729 3.644 1.00 9.84 ATOM 39 C PRO 6 -9.927 35.390 6.096 1.00 9.84 ATOM 40 O PRO 6 -9.173 35.940 6.896 1.00 9.84 ATOM 41 N TRP 7 -10.103 34.056 6.035 1.00 10.38 ATOM 42 CA TRP 7 -9.428 33.185 6.950 1.00 10.38 ATOM 43 CB TRP 7 -10.098 31.806 7.055 1.00 10.38 ATOM 44 CG TRP 7 -9.637 30.953 8.211 1.00 10.38 ATOM 45 CD2 TRP 7 -10.128 29.626 8.458 1.00 10.38 ATOM 46 CD1 TRP 7 -8.759 31.234 9.217 1.00 10.38 ATOM 47 NE1 TRP 7 -8.678 30.167 10.081 1.00 10.38 ATOM 48 CE2 TRP 7 -9.515 29.170 9.623 1.00 10.38 ATOM 49 CE3 TRP 7 -11.021 28.857 7.770 1.00 10.38 ATOM 50 CZ2 TRP 7 -9.789 27.928 10.122 1.00 10.38 ATOM 51 CZ3 TRP 7 -11.291 27.603 8.271 1.00 10.38 ATOM 52 CH2 TRP 7 -10.686 27.149 9.425 1.00 10.38 ATOM 53 C TRP 7 -8.023 32.994 6.466 1.00 10.38 ATOM 54 O TRP 7 -7.781 32.753 5.285 1.00 10.38 ATOM 55 N VAL 8 -7.056 33.121 7.393 1.00 10.66 ATOM 56 CA VAL 8 -5.658 32.978 7.105 1.00 10.66 ATOM 57 CB VAL 8 -4.791 33.355 8.270 1.00 10.66 ATOM 58 CG1 VAL 8 -3.320 33.116 7.887 1.00 10.66 ATOM 59 CG2 VAL 8 -5.110 34.806 8.669 1.00 10.66 ATOM 60 C VAL 8 -5.344 31.554 6.768 1.00 10.66 ATOM 61 O VAL 8 -4.558 31.291 5.859 1.00 10.66 ATOM 62 N GLY 9 -5.985 30.591 7.465 1.00 9.34 ATOM 63 CA GLY 9 -5.612 29.219 7.266 1.00 9.34 ATOM 64 C GLY 9 -4.442 28.942 8.163 1.00 9.34 ATOM 65 O GLY 9 -3.401 28.453 7.730 1.00 9.34 ATOM 66 N SER 10 -4.614 29.264 9.461 1.00 9.17 ATOM 67 CA SER 10 -3.600 29.153 10.472 1.00 9.17 ATOM 68 CB SER 10 -4.080 29.658 11.843 1.00 9.17 ATOM 69 OG SER 10 -5.157 28.858 12.306 1.00 9.17 ATOM 70 C SER 10 -3.183 27.726 10.644 1.00 9.17 ATOM 71 O SER 10 -2.083 27.456 11.122 1.00 9.17 ATOM 72 N SER 11 -4.042 26.769 10.254 1.00 9.33 ATOM 73 CA SER 11 -3.705 25.386 10.430 1.00 9.33 ATOM 74 CB SER 11 -4.784 24.434 9.891 1.00 9.33 ATOM 75 OG SER 11 -4.385 23.087 10.095 1.00 9.33 ATOM 76 C SER 11 -2.450 25.125 9.664 1.00 9.33 ATOM 77 O SER 11 -1.600 24.344 10.091 1.00 9.33 ATOM 78 N TYR 12 -2.296 25.784 8.502 1.00 8.97 ATOM 79 CA TYR 12 -1.109 25.592 7.726 1.00 8.97 ATOM 80 CB TYR 12 -1.106 26.358 6.394 1.00 8.97 ATOM 81 CG TYR 12 0.197 26.035 5.744 1.00 8.97 ATOM 82 CD1 TYR 12 0.361 24.848 5.073 1.00 8.97 ATOM 83 CD2 TYR 12 1.257 26.914 5.806 1.00 8.97 ATOM 84 CE1 TYR 12 1.557 24.537 4.474 1.00 8.97 ATOM 85 CE2 TYR 12 2.457 26.608 5.208 1.00 8.97 ATOM 86 CZ TYR 12 2.607 25.418 4.537 1.00 8.97 ATOM 87 OH TYR 12 3.836 25.098 3.921 1.00 8.97 ATOM 88 C TYR 12 0.055 26.101 8.515 1.00 8.97 ATOM 89 O TYR 12 1.130 25.508 8.494 1.00 8.97 ATOM 90 N VAL 13 -0.130 27.245 9.197 1.00 8.61 ATOM 91 CA VAL 13 0.892 27.921 9.950 1.00 8.61 ATOM 92 CB VAL 13 0.446 29.269 10.429 1.00 8.61 ATOM 93 CG1 VAL 13 1.558 29.861 11.310 1.00 8.61 ATOM 94 CG2 VAL 13 0.079 30.129 9.207 1.00 8.61 ATOM 95 C VAL 13 1.341 27.161 11.168 1.00 8.61 ATOM 96 O VAL 13 2.539 27.082 11.436 1.00 8.61 ATOM 97 N ALA 14 0.407 26.551 11.928 1.00 9.18 ATOM 98 CA ALA 14 0.756 25.978 13.201 1.00 9.18 ATOM 99 CB ALA 14 -0.434 25.280 13.880 1.00 9.18 ATOM 100 C ALA 14 1.830 24.955 13.020 1.00 9.18 ATOM 101 O ALA 14 2.776 24.899 13.803 1.00 9.18 ATOM 102 N GLU 15 1.710 24.116 11.980 1.00 9.17 ATOM 103 CA GLU 15 2.698 23.114 11.711 1.00 9.17 ATOM 104 CB GLU 15 2.313 22.224 10.517 1.00 9.17 ATOM 105 CG GLU 15 3.346 21.142 10.193 1.00 9.17 ATOM 106 CD GLU 15 2.908 20.452 8.908 1.00 9.17 ATOM 107 OE1 GLU 15 1.822 19.810 8.917 1.00 9.17 ATOM 108 OE2 GLU 15 3.649 20.564 7.897 1.00 9.17 ATOM 109 C GLU 15 3.979 23.795 11.340 1.00 9.17 ATOM 110 O GLU 15 5.062 23.376 11.742 1.00 9.17 ATOM 111 N THR 16 3.874 24.892 10.571 1.00 8.55 ATOM 112 CA THR 16 5.020 25.579 10.054 1.00 8.55 ATOM 113 CB THR 16 4.646 26.741 9.185 1.00 8.55 ATOM 114 OG1 THR 16 3.864 26.299 8.085 1.00 8.55 ATOM 115 CG2 THR 16 5.937 27.410 8.684 1.00 8.55 ATOM 116 C THR 16 5.861 26.095 11.178 1.00 8.55 ATOM 117 O THR 16 7.088 26.033 11.114 1.00 8.55 ATOM 118 N GLY 17 5.230 26.607 12.250 1.00 8.47 ATOM 119 CA GLY 17 6.003 27.157 13.326 1.00 8.47 ATOM 120 C GLY 17 6.144 28.631 13.093 1.00 8.47 ATOM 121 O GLY 17 6.967 29.289 13.727 1.00 8.47 ATOM 122 N GLN 18 5.333 29.192 12.174 1.00 7.53 ATOM 123 CA GLN 18 5.423 30.595 11.880 1.00 7.53 ATOM 124 CB GLN 18 4.753 30.954 10.540 1.00 7.53 ATOM 125 CG GLN 18 4.982 32.392 10.072 1.00 7.53 ATOM 126 CD GLN 18 4.421 32.509 8.659 1.00 7.53 ATOM 127 OE1 GLN 18 4.563 33.541 8.004 1.00 7.53 ATOM 128 NE2 GLN 18 3.771 31.419 8.169 1.00 7.53 ATOM 129 C GLN 18 4.743 31.342 12.989 1.00 7.53 ATOM 130 O GLN 18 3.527 31.278 13.157 1.00 7.53 ATOM 131 N ASN 19 5.549 32.075 13.782 1.00 8.34 ATOM 132 CA ASN 19 5.091 32.785 14.943 1.00 8.34 ATOM 133 CB ASN 19 6.254 33.383 15.754 1.00 8.34 ATOM 134 CG ASN 19 5.715 33.834 17.107 1.00 8.34 ATOM 135 OD1 ASN 19 4.506 33.928 17.313 1.00 8.34 ATOM 136 ND2 ASN 19 6.636 34.128 18.061 1.00 8.34 ATOM 137 C ASN 19 4.180 33.910 14.568 1.00 8.34 ATOM 138 O ASN 19 3.137 34.113 15.189 1.00 8.34 ATOM 139 N TRP 20 4.531 34.691 13.534 1.00 9.09 ATOM 140 CA TRP 20 3.654 35.795 13.297 1.00 9.09 ATOM 141 CB TRP 20 4.108 36.852 12.305 1.00 9.09 ATOM 142 CG TRP 20 2.918 37.743 12.105 1.00 9.09 ATOM 143 CD2 TRP 20 2.223 38.410 13.177 1.00 9.09 ATOM 144 CD1 TRP 20 2.196 37.968 10.978 1.00 9.09 ATOM 145 NE1 TRP 20 1.108 38.743 11.277 1.00 9.09 ATOM 146 CE2 TRP 20 1.109 39.024 12.621 1.00 9.09 ATOM 147 CE3 TRP 20 2.484 38.483 14.518 1.00 9.09 ATOM 148 CZ2 TRP 20 0.231 39.733 13.391 1.00 9.09 ATOM 149 CZ3 TRP 20 1.614 39.224 15.288 1.00 9.09 ATOM 150 CH2 TRP 20 0.510 39.837 14.736 1.00 9.09 ATOM 151 C TRP 20 2.294 35.330 12.878 1.00 9.09 ATOM 152 O TRP 20 1.286 35.892 13.300 1.00 9.09 ATOM 153 N ALA 21 2.205 34.283 12.045 1.00 7.33 ATOM 154 CA ALA 21 0.904 33.881 11.592 1.00 7.33 ATOM 155 CB ALA 21 0.946 32.670 10.643 1.00 7.33 ATOM 156 C ALA 21 0.072 33.504 12.781 1.00 7.33 ATOM 157 O ALA 21 -1.101 33.866 12.862 1.00 7.33 ATOM 158 N SER 22 0.673 32.789 13.750 1.00 7.62 ATOM 159 CA SER 22 -0.041 32.380 14.927 1.00 7.62 ATOM 160 CB SER 22 0.819 31.512 15.861 1.00 7.62 ATOM 161 OG SER 22 1.197 30.310 15.207 1.00 7.62 ATOM 162 C SER 22 -0.445 33.596 15.703 1.00 7.62 ATOM 163 O SER 22 -1.560 33.675 16.216 1.00 7.62 ATOM 164 N LEU 23 0.465 34.582 15.816 1.00 8.11 ATOM 165 CA LEU 23 0.158 35.763 16.570 1.00 8.11 ATOM 166 CB LEU 23 1.363 36.696 16.769 1.00 8.11 ATOM 167 CG LEU 23 2.448 36.105 17.690 1.00 8.11 ATOM 168 CD1 LEU 23 3.576 37.118 17.952 1.00 8.11 ATOM 169 CD2 LEU 23 1.834 35.549 18.985 1.00 8.11 ATOM 170 C LEU 23 -0.949 36.508 15.898 1.00 8.11 ATOM 171 O LEU 23 -1.837 37.041 16.561 1.00 8.11 ATOM 172 N ALA 24 -0.930 36.562 14.556 1.00 7.59 ATOM 173 CA ALA 24 -1.951 37.266 13.836 1.00 7.59 ATOM 174 CB ALA 24 -1.726 37.264 12.313 1.00 7.59 ATOM 175 C ALA 24 -3.270 36.607 14.101 1.00 7.59 ATOM 176 O ALA 24 -4.285 37.280 14.270 1.00 7.59 ATOM 177 N ALA 25 -3.288 35.262 14.151 1.00 7.68 ATOM 178 CA ALA 25 -4.519 34.548 14.330 1.00 7.68 ATOM 179 CB ALA 25 -4.319 33.024 14.331 1.00 7.68 ATOM 180 C ALA 25 -5.145 34.910 15.642 1.00 7.68 ATOM 181 O ALA 25 -6.347 35.159 15.708 1.00 7.68 ATOM 182 N ASN 26 -4.352 34.954 16.730 1.00 8.17 ATOM 183 CA ASN 26 -4.925 35.240 18.016 1.00 8.17 ATOM 184 CB ASN 26 -3.971 35.006 19.207 1.00 8.17 ATOM 185 CG ASN 26 -2.770 35.938 19.137 1.00 8.17 ATOM 186 OD1 ASN 26 -2.868 37.136 19.401 1.00 8.17 ATOM 187 ND2 ASN 26 -1.587 35.360 18.803 1.00 8.17 ATOM 188 C ASN 26 -5.413 36.654 18.069 1.00 8.17 ATOM 189 O ASN 26 -6.491 36.927 18.592 1.00 8.17 ATOM 190 N GLU 27 -4.625 37.592 17.518 1.00 7.80 ATOM 191 CA GLU 27 -4.956 38.986 17.581 1.00 7.80 ATOM 192 CB GLU 27 -3.833 39.906 17.069 1.00 7.80 ATOM 193 CG GLU 27 -3.509 39.756 15.582 1.00 7.80 ATOM 194 CD GLU 27 -2.425 40.769 15.250 1.00 7.80 ATOM 195 OE1 GLU 27 -1.864 41.363 16.208 1.00 7.80 ATOM 196 OE2 GLU 27 -2.143 40.965 14.037 1.00 7.80 ATOM 197 C GLU 27 -6.182 39.262 16.763 1.00 7.80 ATOM 198 O GLU 27 -6.993 40.115 17.114 1.00 7.80 ATOM 199 N LEU 28 -6.375 38.547 15.645 1.00 8.19 ATOM 200 CA LEU 28 -7.482 38.874 14.789 1.00 8.19 ATOM 201 CB LEU 28 -7.562 37.972 13.547 1.00 8.19 ATOM 202 CG LEU 28 -6.332 38.089 12.631 1.00 8.19 ATOM 203 CD1 LEU 28 -6.503 37.265 11.345 1.00 8.19 ATOM 204 CD2 LEU 28 -5.974 39.559 12.365 1.00 8.19 ATOM 205 C LEU 28 -8.776 38.719 15.532 1.00 8.19 ATOM 206 O LEU 28 -9.657 39.573 15.445 1.00 8.19 ATOM 207 N ARG 29 -8.914 37.623 16.296 1.00 8.67 ATOM 208 CA ARG 29 -10.108 37.308 17.030 1.00 8.67 ATOM 209 CB ARG 29 -10.083 35.882 17.613 1.00 8.67 ATOM 210 CG ARG 29 -8.887 35.593 18.520 1.00 8.67 ATOM 211 CD ARG 29 -8.681 34.100 18.784 1.00 8.67 ATOM 212 NE ARG 29 -8.552 33.437 17.454 1.00 8.67 ATOM 213 CZ ARG 29 -7.864 32.265 17.333 1.00 8.67 ATOM 214 NH1 ARG 29 -7.292 31.693 18.433 1.00 8.67 ATOM 215 NH2 ARG 29 -7.739 31.668 16.112 1.00 8.67 ATOM 216 C ARG 29 -10.325 38.301 18.135 1.00 8.67 ATOM 217 O ARG 29 -11.452 38.478 18.596 1.00 8.67 ATOM 218 N VAL 30 -9.241 38.944 18.608 1.00 8.45 ATOM 219 CA VAL 30 -9.270 39.879 19.704 1.00 8.45 ATOM 220 CB VAL 30 -7.935 40.331 20.238 1.00 8.45 ATOM 221 CG1 VAL 30 -7.033 39.102 20.431 1.00 8.45 ATOM 222 CG2 VAL 30 -7.389 41.509 19.419 1.00 8.45 ATOM 223 C VAL 30 -10.007 41.120 19.296 1.00 8.45 ATOM 224 O VAL 30 -10.242 41.986 20.139 1.00 8.45 ATOM 225 N THR 31 -10.411 41.220 18.008 1.00 8.55 ATOM 226 CA THR 31 -10.965 42.406 17.404 1.00 8.55 ATOM 227 CB THR 31 -11.856 43.213 18.309 1.00 8.55 ATOM 228 OG1 THR 31 -12.862 42.378 18.860 1.00 8.55 ATOM 229 CG2 THR 31 -12.530 44.326 17.486 1.00 8.55 ATOM 230 C THR 31 -9.839 43.289 16.942 1.00 8.55 ATOM 231 O THR 31 -9.815 44.494 17.188 1.00 8.55 ATOM 232 N GLU 32 -8.838 42.676 16.267 1.00 8.74 ATOM 233 CA GLU 32 -7.757 43.435 15.701 1.00 8.74 ATOM 234 CB GLU 32 -6.356 43.020 16.186 1.00 8.74 ATOM 235 CG GLU 32 -6.088 43.463 17.627 1.00 8.74 ATOM 236 CD GLU 32 -4.610 43.278 17.935 1.00 8.74 ATOM 237 OE1 GLU 32 -3.902 42.650 17.103 1.00 8.74 ATOM 238 OE2 GLU 32 -4.164 43.773 19.004 1.00 8.74 ATOM 239 C GLU 32 -7.803 43.340 14.197 1.00 8.74 ATOM 240 O GLU 32 -8.236 42.334 13.636 1.00 8.74 ATOM 241 N ARG 33 -7.366 44.411 13.496 1.00 9.91 ATOM 242 CA ARG 33 -7.413 44.407 12.057 1.00 9.91 ATOM 243 CB ARG 33 -7.138 45.774 11.411 1.00 9.91 ATOM 244 CG ARG 33 -8.269 46.775 11.647 1.00 9.91 ATOM 245 CD ARG 33 -8.197 47.998 10.735 1.00 9.91 ATOM 246 NE ARG 33 -8.636 47.567 9.377 1.00 9.91 ATOM 247 CZ ARG 33 -7.731 47.057 8.490 1.00 9.91 ATOM 248 NH1 ARG 33 -6.416 46.947 8.840 1.00 9.91 ATOM 249 NH2 ARG 33 -8.145 46.647 7.255 1.00 9.91 ATOM 250 C ARG 33 -6.407 43.431 11.545 1.00 9.91 ATOM 251 O ARG 33 -5.227 43.459 11.891 1.00 9.91 ATOM 252 N PRO 34 -6.886 42.592 10.669 1.00 8.69 ATOM 253 CA PRO 34 -6.081 41.535 10.127 1.00 8.69 ATOM 254 CD PRO 34 -8.299 42.247 10.680 1.00 8.69 ATOM 255 CB PRO 34 -7.046 40.640 9.354 1.00 8.69 ATOM 256 CG PRO 34 -8.380 40.825 10.101 1.00 8.69 ATOM 257 C PRO 34 -4.926 42.037 9.328 1.00 8.69 ATOM 258 O PRO 34 -3.988 41.275 9.099 1.00 8.69 ATOM 259 N PHE 35 -4.957 43.312 8.909 1.00 8.28 ATOM 260 CA PHE 35 -3.898 43.826 8.093 1.00 8.28 ATOM 261 CB PHE 35 -4.151 45.187 7.427 1.00 8.28 ATOM 262 CG PHE 35 -3.017 45.170 6.471 1.00 8.28 ATOM 263 CD1 PHE 35 -3.018 44.245 5.454 1.00 8.28 ATOM 264 CD2 PHE 35 -1.947 46.021 6.610 1.00 8.28 ATOM 265 CE1 PHE 35 -1.974 44.177 4.566 1.00 8.28 ATOM 266 CE2 PHE 35 -0.903 45.957 5.721 1.00 8.28 ATOM 267 CZ PHE 35 -0.911 45.035 4.702 1.00 8.28 ATOM 268 C PHE 35 -2.628 43.875 8.897 1.00 8.28 ATOM 269 O PHE 35 -1.522 43.903 8.356 1.00 8.28 ATOM 270 N TRP 36 -2.769 43.886 10.230 1.00 8.17 ATOM 271 CA TRP 36 -1.699 43.966 11.186 1.00 8.17 ATOM 272 CB TRP 36 -2.237 43.814 12.620 1.00 8.17 ATOM 273 CG TRP 36 -1.267 44.114 13.732 1.00 8.17 ATOM 274 CD2 TRP 36 -1.292 45.334 14.489 1.00 8.17 ATOM 275 CD1 TRP 36 -0.284 43.340 14.277 1.00 8.17 ATOM 276 NE1 TRP 36 0.313 44.009 15.319 1.00 8.17 ATOM 277 CE2 TRP 36 -0.301 45.236 15.462 1.00 8.17 ATOM 278 CE3 TRP 36 -2.085 46.442 14.382 1.00 8.17 ATOM 279 CZ2 TRP 36 -0.085 46.252 16.352 1.00 8.17 ATOM 280 CZ3 TRP 36 -1.860 47.466 15.275 1.00 8.17 ATOM 281 CH2 TRP 36 -0.878 47.373 16.240 1.00 8.17 ATOM 282 C TRP 36 -0.777 42.808 10.943 1.00 8.17 ATOM 283 O TRP 36 0.367 42.806 11.396 1.00 8.17 ATOM 284 N ILE 37 -1.275 41.759 10.266 1.00 7.53 ATOM 285 CA ILE 37 -0.496 40.586 9.993 1.00 7.53 ATOM 286 CB ILE 37 -1.272 39.566 9.202 1.00 7.53 ATOM 287 CG1 ILE 37 -0.468 38.264 9.038 1.00 7.53 ATOM 288 CG2 ILE 37 -1.703 40.214 7.876 1.00 7.53 ATOM 289 CD1 ILE 37 -1.290 37.093 8.500 1.00 7.53 ATOM 290 C ILE 37 0.732 40.944 9.207 1.00 7.53 ATOM 291 O ILE 37 1.825 40.450 9.485 1.00 7.53 ATOM 292 N SER 38 0.593 41.828 8.209 1.00 8.59 ATOM 293 CA SER 38 1.699 42.179 7.364 1.00 8.59 ATOM 294 CB SER 38 1.312 43.213 6.297 1.00 8.59 ATOM 295 OG SER 38 0.355 42.654 5.410 1.00 8.59 ATOM 296 C SER 38 2.786 42.774 8.201 1.00 8.59 ATOM 297 O SER 38 3.967 42.537 7.957 1.00 8.59 ATOM 298 N SER 39 2.408 43.559 9.223 1.00 8.18 ATOM 299 CA SER 39 3.380 44.236 10.029 1.00 8.18 ATOM 300 CB SER 39 2.733 45.144 11.091 1.00 8.18 ATOM 301 OG SER 39 3.736 45.792 11.858 1.00 8.18 ATOM 302 C SER 39 4.261 43.260 10.740 1.00 8.18 ATOM 303 O SER 39 5.481 43.405 10.741 1.00 8.18 ATOM 304 N PHE 40 3.689 42.221 11.370 1.00 7.99 ATOM 305 CA PHE 40 4.590 41.380 12.092 1.00 7.99 ATOM 306 CB PHE 40 4.035 40.648 13.293 1.00 7.99 ATOM 307 CG PHE 40 5.200 40.172 14.092 1.00 7.99 ATOM 308 CD1 PHE 40 5.820 41.032 14.968 1.00 7.99 ATOM 309 CD2 PHE 40 5.677 38.888 13.972 1.00 7.99 ATOM 310 CE1 PHE 40 6.896 40.623 15.718 1.00 7.99 ATOM 311 CE2 PHE 40 6.754 38.471 14.719 1.00 7.99 ATOM 312 CZ PHE 40 7.368 39.339 15.590 1.00 7.99 ATOM 313 C PHE 40 5.398 40.542 11.152 1.00 7.99 ATOM 314 O PHE 40 6.395 39.935 11.541 1.00 7.99 ATOM 315 N ILE 41 4.922 40.426 9.901 1.00 7.75 ATOM 316 CA ILE 41 5.635 39.796 8.825 1.00 7.75 ATOM 317 CB ILE 41 4.859 39.784 7.542 1.00 7.75 ATOM 318 CG1 ILE 41 3.558 38.985 7.711 1.00 7.75 ATOM 319 CG2 ILE 41 5.781 39.245 6.435 1.00 7.75 ATOM 320 CD1 ILE 41 2.581 39.175 6.552 1.00 7.75 ATOM 321 C ILE 41 6.885 40.600 8.591 1.00 7.75 ATOM 322 O ILE 41 7.910 40.066 8.174 1.00 7.75 ATOM 323 N GLY 42 6.840 41.925 8.829 1.00 8.33 ATOM 324 CA GLY 42 8.030 42.700 8.604 1.00 8.33 ATOM 325 C GLY 42 7.879 43.499 7.347 1.00 8.33 ATOM 326 O GLY 42 8.868 43.927 6.752 1.00 8.33 ATOM 327 N ARG 43 6.624 43.712 6.908 1.00 7.95 ATOM 328 CA ARG 43 6.330 44.491 5.738 1.00 7.95 ATOM 329 CB ARG 43 4.856 44.397 5.311 1.00 7.95 ATOM 330 CG ARG 43 4.512 45.190 4.048 1.00 7.95 ATOM 331 CD ARG 43 3.003 45.327 3.820 1.00 7.95 ATOM 332 NE ARG 43 2.430 43.951 3.762 1.00 7.95 ATOM 333 CZ ARG 43 1.948 43.426 2.598 1.00 7.95 ATOM 334 NH1 ARG 43 1.901 44.179 1.460 1.00 7.95 ATOM 335 NH2 ARG 43 1.492 42.140 2.573 1.00 7.95 ATOM 336 C ARG 43 6.621 45.933 6.044 1.00 7.95 ATOM 337 O ARG 43 6.648 46.343 7.203 1.00 7.95 ATOM 338 N SER 44 6.857 46.741 4.988 1.00 8.07 ATOM 339 CA SER 44 7.200 48.131 5.129 1.00 8.07 ATOM 340 CB SER 44 7.710 48.765 3.823 1.00 8.07 ATOM 341 OG SER 44 6.688 48.737 2.837 1.00 8.07 ATOM 342 C SER 44 6.003 48.916 5.581 1.00 8.07 ATOM 343 O SER 44 4.864 48.465 5.473 1.00 8.07 ATOM 344 N LYS 45 6.259 50.131 6.116 1.00 7.87 ATOM 345 CA LYS 45 5.242 51.011 6.624 1.00 7.87 ATOM 346 CB LYS 45 5.828 52.339 7.135 1.00 7.87 ATOM 347 CG LYS 45 6.448 52.276 8.530 1.00 7.87 ATOM 348 CD LYS 45 5.402 52.046 9.618 1.00 7.87 ATOM 349 CE LYS 45 4.196 52.977 9.479 1.00 7.87 ATOM 350 NZ LYS 45 4.634 54.392 9.498 1.00 7.87 ATOM 351 C LYS 45 4.302 51.384 5.525 1.00 7.87 ATOM 352 O LYS 45 3.084 51.323 5.688 1.00 7.87 TER END