####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS023_4-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS023_4-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 25 13 - 37 4.85 11.06 LCS_AVERAGE: 48.86 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 19 - 27 1.97 13.56 LONGEST_CONTINUOUS_SEGMENT: 9 20 - 28 1.91 13.94 LCS_AVERAGE: 16.27 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 7 20 - 26 0.68 15.44 LCS_AVERAGE: 11.31 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 6 9 3 4 5 5 5 6 6 6 6 7 9 12 16 17 19 21 22 24 26 28 LCS_GDT V 3 V 3 4 6 9 3 4 5 5 5 6 6 6 6 7 9 12 15 17 20 23 25 27 31 33 LCS_GDT Q 4 Q 4 4 6 14 3 4 5 5 5 6 6 6 7 9 15 16 18 20 22 25 26 28 32 33 LCS_GDT G 5 G 5 4 6 14 3 4 5 5 5 6 8 9 11 12 15 17 19 20 22 24 26 28 32 33 LCS_GDT P 6 P 6 4 6 14 3 4 5 8 8 8 10 11 12 14 15 17 19 20 22 23 26 28 32 33 LCS_GDT W 7 W 7 4 6 16 3 4 5 8 8 8 10 11 12 14 15 17 19 20 24 25 27 29 32 33 LCS_GDT V 8 V 8 3 5 17 3 3 5 8 9 11 11 13 17 20 22 23 24 28 28 29 30 31 33 33 LCS_GDT G 9 G 9 3 5 17 3 3 5 8 10 11 11 14 17 20 22 23 26 28 28 29 30 31 33 33 LCS_GDT S 10 S 10 3 5 17 1 3 4 8 10 11 11 14 17 20 22 23 26 28 28 29 30 31 33 33 LCS_GDT S 11 S 11 6 7 17 3 4 6 7 7 7 7 8 12 15 21 23 26 28 28 29 30 31 33 33 LCS_GDT Y 12 Y 12 6 7 17 4 5 6 7 7 7 7 7 12 13 15 17 18 20 27 29 30 31 33 33 LCS_GDT V 13 V 13 6 7 25 4 5 6 7 7 7 10 10 12 14 16 20 26 28 28 29 30 31 33 33 LCS_GDT A 14 A 14 6 7 25 4 5 6 8 8 9 11 13 14 16 21 23 26 28 28 29 30 31 33 33 LCS_GDT E 15 E 15 6 7 25 4 5 6 7 7 9 11 13 14 16 18 23 26 28 28 29 30 31 33 33 LCS_GDT T 16 T 16 6 7 25 4 5 6 7 7 7 8 9 12 14 17 20 23 25 27 29 30 31 33 33 LCS_GDT G 17 G 17 6 7 25 4 5 6 7 7 7 8 9 11 13 17 20 26 28 28 29 30 31 33 33 LCS_GDT Q 18 Q 18 4 4 25 3 3 4 4 5 9 11 13 16 19 22 23 26 28 28 29 30 31 33 33 LCS_GDT N 19 N 19 4 9 25 3 4 5 6 7 10 11 14 17 20 22 23 26 28 28 29 30 31 33 33 LCS_GDT W 20 W 20 7 9 25 4 7 7 8 9 10 11 14 16 20 22 23 26 28 28 29 30 31 33 33 LCS_GDT A 21 A 21 7 9 25 4 7 7 8 10 11 11 14 17 20 22 23 26 28 28 29 30 31 33 33 LCS_GDT S 22 S 22 7 9 25 4 7 7 8 8 10 10 11 14 17 17 23 25 28 28 29 30 31 33 33 LCS_GDT L 23 L 23 7 9 25 4 7 7 8 8 10 11 14 17 20 22 23 26 28 28 29 30 31 33 33 LCS_GDT A 24 A 24 7 9 25 4 7 7 8 9 10 11 14 17 20 22 23 26 28 28 29 30 31 33 33 LCS_GDT A 25 A 25 7 9 25 3 7 7 8 10 11 11 13 15 17 22 23 26 28 28 29 30 31 33 33 LCS_GDT N 26 N 26 7 9 25 3 7 7 8 10 11 11 13 16 20 22 23 26 28 28 29 30 31 33 33 LCS_GDT E 27 E 27 5 9 25 3 5 6 8 10 11 11 14 17 20 22 23 26 28 28 29 30 31 33 33 LCS_GDT L 28 L 28 4 9 25 3 3 5 6 10 11 11 14 17 20 22 23 26 28 28 29 30 31 33 33 LCS_GDT R 29 R 29 4 7 25 3 4 5 7 8 10 11 14 17 20 22 23 26 28 28 29 30 31 33 33 LCS_GDT V 30 V 30 4 8 25 3 4 5 7 9 10 11 14 17 20 22 23 26 28 28 29 30 31 33 33 LCS_GDT T 31 T 31 4 8 25 3 4 5 7 9 10 11 14 17 20 22 23 26 28 28 29 30 31 33 33 LCS_GDT E 32 E 32 4 8 25 3 4 5 7 9 10 11 14 17 20 22 23 26 28 28 29 30 31 33 33 LCS_GDT R 33 R 33 4 8 25 3 4 5 7 9 10 11 14 16 20 22 23 26 28 28 29 30 31 33 33 LCS_GDT P 34 P 34 3 8 25 2 3 5 6 8 10 11 13 17 20 22 23 26 28 28 29 30 31 33 33 LCS_GDT F 35 F 35 3 8 25 3 4 5 7 10 11 11 13 17 20 22 23 26 28 28 29 30 31 33 33 LCS_GDT W 36 W 36 6 8 25 3 5 6 8 10 11 11 13 17 20 22 23 26 28 28 29 30 31 33 33 LCS_GDT I 37 I 37 6 8 25 3 5 6 8 10 11 11 13 17 20 22 23 26 28 28 29 30 31 33 33 LCS_GDT S 38 S 38 6 7 21 4 5 6 7 7 10 11 12 13 16 18 20 22 23 26 28 30 31 33 33 LCS_GDT S 39 S 39 6 7 21 4 5 6 7 7 8 10 12 13 16 18 20 22 23 26 28 30 31 33 33 LCS_GDT F 40 F 40 6 7 21 4 5 6 7 7 8 10 11 13 16 18 20 22 24 27 28 30 31 33 33 LCS_GDT I 41 I 41 6 7 21 4 5 6 7 7 8 10 12 13 16 18 20 22 23 24 27 29 31 33 33 LCS_GDT G 42 G 42 4 7 20 3 3 4 4 7 7 10 10 11 12 15 18 19 20 22 23 26 27 28 30 LCS_GDT R 43 R 43 4 5 20 0 3 4 4 6 6 8 9 11 11 14 16 19 20 22 22 24 25 27 30 LCS_GDT S 44 S 44 4 5 20 0 3 4 4 5 5 8 9 11 12 15 17 19 20 22 23 25 28 28 30 LCS_GDT K 45 K 45 4 5 16 0 3 4 4 5 5 8 9 10 11 13 15 19 20 22 23 26 28 32 33 LCS_AVERAGE LCS_A: 25.48 ( 11.31 16.27 48.86 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 7 7 8 10 11 11 14 17 20 22 23 26 28 28 29 30 31 33 33 GDT PERCENT_AT 9.09 15.91 15.91 18.18 22.73 25.00 25.00 31.82 38.64 45.45 50.00 52.27 59.09 63.64 63.64 65.91 68.18 70.45 75.00 75.00 GDT RMS_LOCAL 0.14 0.68 0.68 1.38 1.87 1.99 1.99 2.80 3.57 3.83 4.07 4.19 4.98 5.14 5.14 5.30 5.47 5.70 6.06 6.06 GDT RMS_ALL_AT 13.82 15.44 15.44 11.87 10.09 10.10 10.10 11.27 10.76 10.72 10.52 10.57 10.58 10.53 10.53 10.62 10.68 10.70 10.73 10.73 # Checking swapping # possible swapping detected: E 15 E 15 # possible swapping detected: E 32 E 32 # possible swapping detected: F 35 F 35 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 14.243 0 0.432 0.518 15.316 0.000 0.000 - LGA V 3 V 3 12.174 0 0.078 1.058 13.380 0.000 0.000 13.380 LGA Q 4 Q 4 12.200 0 0.671 0.893 14.090 0.000 0.000 14.090 LGA G 5 G 5 13.887 0 0.058 0.058 17.128 0.000 0.000 - LGA P 6 P 6 15.227 0 0.642 0.644 18.871 0.000 0.000 18.871 LGA W 7 W 7 9.660 0 0.428 0.802 11.696 0.000 0.000 9.900 LGA V 8 V 8 5.695 0 0.498 0.978 8.002 11.364 8.052 3.905 LGA G 9 G 9 1.023 0 0.500 0.500 3.166 62.273 62.273 - LGA S 10 S 10 1.338 0 0.341 0.684 5.580 38.182 36.970 3.355 LGA S 11 S 11 8.718 0 0.531 0.562 12.981 0.000 0.000 12.981 LGA Y 12 Y 12 12.518 0 0.172 1.448 15.883 0.000 0.000 15.883 LGA V 13 V 13 11.975 0 0.028 1.026 13.317 0.000 0.000 13.317 LGA A 14 A 14 11.231 0 0.016 0.016 11.735 0.000 0.000 - LGA E 15 E 15 12.082 0 0.086 1.164 16.261 0.000 0.000 15.897 LGA T 16 T 16 13.251 0 0.264 0.982 15.097 0.000 0.000 12.672 LGA G 17 G 17 11.436 0 0.297 0.297 12.133 0.000 0.000 - LGA Q 18 Q 18 5.682 0 0.612 1.348 11.379 16.364 7.273 11.379 LGA N 19 N 19 2.763 0 0.052 0.284 6.750 22.727 11.364 6.750 LGA W 20 W 20 2.581 0 0.622 0.974 5.350 54.545 16.623 5.350 LGA A 21 A 21 5.032 0 0.102 0.106 7.358 6.818 5.455 - LGA S 22 S 22 7.913 0 0.049 0.645 10.204 0.000 0.000 10.204 LGA L 23 L 23 3.855 0 0.078 0.896 8.913 40.000 20.000 8.598 LGA A 24 A 24 3.286 0 0.026 0.037 5.783 25.455 20.727 - LGA A 25 A 25 7.415 0 0.055 0.058 8.953 0.000 0.000 - LGA N 26 N 26 5.625 0 0.133 0.808 9.588 1.818 0.909 9.588 LGA E 27 E 27 1.924 0 0.125 0.844 4.397 29.091 26.263 4.397 LGA L 28 L 28 4.056 0 0.581 1.006 10.454 17.273 8.636 9.115 LGA R 29 R 29 3.280 0 0.393 1.608 9.562 30.455 11.074 9.340 LGA V 30 V 30 1.374 0 0.122 0.304 2.581 61.818 50.130 2.333 LGA T 31 T 31 1.646 0 0.037 0.108 2.346 51.364 47.532 2.077 LGA E 32 E 32 1.852 0 0.650 1.201 4.223 36.364 33.737 3.967 LGA R 33 R 33 1.711 0 0.062 1.814 5.415 28.182 29.752 1.738 LGA P 34 P 34 6.802 0 0.514 0.568 8.495 0.455 0.260 6.717 LGA F 35 F 35 8.528 0 0.455 1.136 10.817 0.000 0.000 10.678 LGA W 36 W 36 8.850 0 0.618 0.817 9.786 0.000 0.000 8.087 LGA I 37 I 37 8.022 0 0.064 1.340 11.419 0.000 0.000 5.387 LGA S 38 S 38 15.487 0 0.078 0.618 18.438 0.000 0.000 18.438 LGA S 39 S 39 16.361 0 0.131 0.558 18.386 0.000 0.000 15.087 LGA F 40 F 40 15.006 0 0.090 0.674 18.702 0.000 0.000 9.742 LGA I 41 I 41 19.439 0 0.594 1.706 23.406 0.000 0.000 20.268 LGA G 42 G 42 25.218 0 0.497 0.497 26.209 0.000 0.000 - LGA R 43 R 43 23.121 0 0.649 1.210 28.149 0.000 0.000 27.657 LGA S 44 S 44 20.061 0 0.640 0.742 21.267 0.000 0.000 21.061 LGA K 45 K 45 18.656 0 0.643 0.745 22.621 0.000 0.000 11.840 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 9.137 9.096 9.806 12.149 9.023 4.935 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 14 2.80 32.955 29.466 0.482 LGA_LOCAL RMSD: 2.803 Number of atoms: 14 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 11.271 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 9.137 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.356938 * X + 0.880251 * Y + -0.312656 * Z + -3.065104 Y_new = -0.574214 * X + 0.470757 * Y + 0.669826 * Z + 13.177420 Z_new = 0.736800 * X + -0.059554 * Y + 0.673483 * Z + 26.227016 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.014638 -0.828324 -0.088198 [DEG: -58.1345 -47.4595 -5.0534 ] ZXZ: -2.704878 0.831885 1.651449 [DEG: -154.9781 47.6635 94.6211 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS023_4-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS023_4-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 14 2.80 29.466 9.14 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS023_4-D1 PFRMAT TS TARGET T0953s2 MODEL 4 PARENT N/A ATOM 12 N ALA 2 1.760 40.692 24.199 1.00 10.52 ATOM 14 CA ALA 2 2.368 39.408 24.642 1.00 10.52 ATOM 15 CB ALA 2 1.269 38.362 24.995 1.00 10.52 ATOM 16 C ALA 2 3.438 38.800 23.704 1.00 10.52 ATOM 17 O ALA 2 4.626 39.117 23.843 1.00 10.52 ATOM 18 N VAL 3 3.007 37.939 22.768 1.00 10.35 ATOM 20 CA VAL 3 3.876 37.265 21.782 1.00 10.35 ATOM 21 CB VAL 3 3.885 35.678 21.998 1.00 10.35 ATOM 22 CG1 VAL 3 2.498 35.046 21.771 1.00 10.35 ATOM 23 CG2 VAL 3 4.978 34.997 21.157 1.00 10.35 ATOM 24 C VAL 3 3.438 37.686 20.357 1.00 10.35 ATOM 25 O VAL 3 2.259 37.982 20.140 1.00 10.35 ATOM 26 N GLN 4 4.397 37.721 19.419 1.00 9.40 ATOM 28 CA GLN 4 4.155 38.102 18.014 1.00 9.40 ATOM 29 CB GLN 4 5.155 39.174 17.560 1.00 9.40 ATOM 30 CG GLN 4 4.969 40.540 18.213 1.00 9.40 ATOM 31 CD GLN 4 5.980 41.561 17.729 1.00 9.40 ATOM 32 OE1 GLN 4 5.739 42.279 16.759 1.00 9.40 ATOM 33 NE2 GLN 4 7.122 41.631 18.405 1.00 9.40 ATOM 36 C GLN 4 4.202 36.906 17.053 1.00 9.40 ATOM 37 O GLN 4 3.521 36.910 16.023 1.00 9.40 ATOM 38 N GLY 5 4.985 35.882 17.410 1.00 8.28 ATOM 40 CA GLY 5 5.118 34.680 16.588 1.00 8.28 ATOM 41 C GLY 5 3.981 33.678 16.787 1.00 8.28 ATOM 42 O GLY 5 3.358 33.755 17.849 1.00 8.28 ATOM 43 N PRO 6 3.658 32.749 15.833 1.00 9.36 ATOM 44 CD PRO 6 2.631 31.767 16.246 1.00 9.36 ATOM 45 CA PRO 6 4.149 32.379 14.484 1.00 9.36 ATOM 46 CB PRO 6 3.262 31.179 14.125 1.00 9.36 ATOM 47 CG PRO 6 2.992 30.554 15.429 1.00 9.36 ATOM 48 C PRO 6 4.061 33.475 13.393 1.00 9.36 ATOM 49 O PRO 6 3.798 34.642 13.702 1.00 9.36 ATOM 50 N TRP 7 4.303 33.077 12.133 1.00 9.55 ATOM 52 CA TRP 7 4.252 33.950 10.948 1.00 9.55 ATOM 53 CB TRP 7 5.575 33.847 10.150 1.00 9.55 ATOM 54 CG TRP 7 6.022 35.120 9.381 1.00 9.55 ATOM 55 CD2 TRP 7 5.796 35.433 7.988 1.00 9.55 ATOM 56 CE2 TRP 7 6.426 36.685 7.733 1.00 9.55 ATOM 57 CE3 TRP 7 5.124 34.780 6.929 1.00 9.55 ATOM 58 CD1 TRP 7 6.759 36.170 9.885 1.00 9.55 ATOM 59 NE1 TRP 7 6.999 37.101 8.905 1.00 9.55 ATOM 61 CZ2 TRP 7 6.406 37.303 6.459 1.00 9.55 ATOM 62 CZ3 TRP 7 5.102 35.396 5.653 1.00 9.55 ATOM 63 CH2 TRP 7 5.743 36.648 5.436 1.00 9.55 ATOM 64 C TRP 7 3.063 33.481 10.089 1.00 9.55 ATOM 65 O TRP 7 2.721 32.291 10.116 1.00 9.55 ATOM 66 N VAL 8 2.448 34.405 9.334 1.00 9.56 ATOM 68 CA VAL 8 1.283 34.106 8.475 1.00 9.56 ATOM 69 CB VAL 8 0.078 35.162 8.719 1.00 9.56 ATOM 70 CG1 VAL 8 0.544 36.617 8.509 1.00 9.56 ATOM 71 CG2 VAL 8 -1.146 34.850 7.851 1.00 9.56 ATOM 72 C VAL 8 1.698 33.888 6.985 1.00 9.56 ATOM 73 O VAL 8 1.467 34.742 6.116 1.00 9.56 ATOM 74 N GLY 9 2.369 32.755 6.745 1.00 9.36 ATOM 76 CA GLY 9 2.806 32.372 5.410 1.00 9.36 ATOM 77 C GLY 9 3.932 31.336 5.311 1.00 9.36 ATOM 78 O GLY 9 4.717 31.194 6.255 1.00 9.36 ATOM 79 N SER 10 3.999 30.625 4.168 1.00 9.41 ATOM 81 CA SER 10 4.999 29.566 3.847 1.00 9.41 ATOM 82 CB SER 10 4.608 28.222 4.509 1.00 9.41 ATOM 83 OG SER 10 5.633 27.251 4.370 1.00 9.41 ATOM 85 C SER 10 5.203 29.393 2.305 1.00 9.41 ATOM 86 O SER 10 6.014 30.119 1.720 1.00 9.41 ATOM 87 N SER 11 4.477 28.446 1.673 1.00 8.82 ATOM 89 CA SER 11 4.515 28.139 0.210 1.00 8.82 ATOM 90 OG SER 11 4.459 26.272 -1.365 1.00 8.82 ATOM 92 C SER 11 3.360 28.953 -0.419 1.00 8.82 ATOM 93 O SER 11 3.055 29.995 0.141 1.00 8.82 ATOM 94 CB SER 11 4.301 26.633 -0.002 1.00 8.82 ATOM 95 N TYR 12 2.854 28.656 -1.627 1.00 8.94 ATOM 97 CA TYR 12 1.692 29.432 -2.130 1.00 8.94 ATOM 98 CB TYR 12 1.638 29.385 -3.673 1.00 8.94 ATOM 99 CG TYR 12 2.827 29.998 -4.424 1.00 8.94 ATOM 100 CD1 TYR 12 3.950 29.212 -4.785 1.00 8.94 ATOM 101 CE1 TYR 12 5.038 29.768 -5.512 1.00 8.94 ATOM 102 CD2 TYR 12 2.822 31.362 -4.812 1.00 8.94 ATOM 103 CE2 TYR 12 3.907 31.926 -5.540 1.00 8.94 ATOM 104 CZ TYR 12 5.006 31.123 -5.883 1.00 8.94 ATOM 105 OH TYR 12 6.056 31.667 -6.587 1.00 8.94 ATOM 107 C TYR 12 0.315 29.020 -1.534 1.00 8.94 ATOM 108 O TYR 12 -0.313 29.800 -0.797 1.00 8.94 ATOM 109 N VAL 13 -0.060 27.748 -1.760 1.00 8.56 ATOM 111 CA VAL 13 -1.309 27.120 -1.269 1.00 8.56 ATOM 112 CB VAL 13 -1.752 25.879 -2.130 1.00 8.56 ATOM 113 CG1 VAL 13 -2.365 26.352 -3.438 1.00 8.56 ATOM 114 CG2 VAL 13 -0.569 24.926 -2.424 1.00 8.56 ATOM 115 C VAL 13 -1.209 26.768 0.220 1.00 8.56 ATOM 116 O VAL 13 -2.134 27.017 1.006 1.00 8.56 ATOM 117 N ALA 14 -0.051 26.186 0.569 1.00 8.29 ATOM 119 CA ALA 14 0.299 25.771 1.930 1.00 8.29 ATOM 120 CB ALA 14 1.581 24.974 1.933 1.00 8.29 ATOM 121 C ALA 14 0.454 27.018 2.795 1.00 8.29 ATOM 122 O ALA 14 0.037 27.008 3.949 1.00 8.29 ATOM 123 N GLU 15 0.971 28.105 2.198 1.00 9.38 ATOM 125 CA GLU 15 1.202 29.405 2.872 1.00 9.38 ATOM 126 CB GLU 15 1.750 30.431 1.863 1.00 9.38 ATOM 127 CG GLU 15 1.579 31.943 2.145 1.00 9.38 ATOM 128 CD GLU 15 2.157 32.816 1.046 1.00 9.38 ATOM 129 OE1 GLU 15 3.350 33.172 1.135 1.00 9.38 ATOM 130 OE2 GLU 15 1.417 33.146 0.096 1.00 9.38 ATOM 131 C GLU 15 -0.065 29.998 3.464 1.00 9.38 ATOM 132 O GLU 15 -0.097 30.311 4.659 1.00 9.38 ATOM 133 N THR 16 -1.115 30.066 2.637 1.00 7.86 ATOM 135 CA THR 16 -2.384 30.648 3.053 1.00 7.86 ATOM 136 CB THR 16 -3.320 30.998 1.817 1.00 7.86 ATOM 137 OG1 THR 16 -4.595 31.463 2.280 1.00 7.86 ATOM 139 CG2 THR 16 -3.516 29.804 0.862 1.00 7.86 ATOM 140 C THR 16 -3.080 29.794 4.114 1.00 7.86 ATOM 141 O THR 16 -3.206 30.252 5.237 1.00 7.86 ATOM 142 N GLY 17 -3.224 28.493 3.843 1.00 8.29 ATOM 144 CA GLY 17 -3.920 27.609 4.769 1.00 8.29 ATOM 145 C GLY 17 -3.355 27.210 6.125 1.00 8.29 ATOM 146 O GLY 17 -4.032 27.429 7.139 1.00 8.29 ATOM 147 N GLN 18 -2.112 26.718 6.168 1.00 7.35 ATOM 149 CA GLN 18 -1.486 26.276 7.426 1.00 7.35 ATOM 150 CB GLN 18 -0.312 25.297 7.169 1.00 7.35 ATOM 151 CG GLN 18 0.950 25.846 6.484 1.00 7.35 ATOM 152 CD GLN 18 2.018 24.786 6.293 1.00 7.35 ATOM 153 OE1 GLN 18 2.072 24.124 5.257 1.00 7.35 ATOM 154 NE2 GLN 18 2.873 24.619 7.295 1.00 7.35 ATOM 157 C GLN 18 -1.100 27.379 8.429 1.00 7.35 ATOM 158 O GLN 18 -1.440 27.287 9.615 1.00 7.35 ATOM 159 N ASN 19 -0.428 28.421 7.928 1.00 8.21 ATOM 161 CA ASN 19 0.037 29.556 8.736 1.00 8.21 ATOM 162 CB ASN 19 1.148 30.301 8.006 1.00 8.21 ATOM 163 CG ASN 19 2.444 29.502 7.933 1.00 8.21 ATOM 164 OD1 ASN 19 2.650 28.709 7.011 1.00 8.21 ATOM 165 ND2 ASN 19 3.332 29.719 8.901 1.00 8.21 ATOM 168 C ASN 19 -1.019 30.530 9.274 1.00 8.21 ATOM 169 O ASN 19 -0.918 30.954 10.431 1.00 8.21 ATOM 170 N TRP 20 -2.026 30.868 8.454 1.00 7.37 ATOM 172 CA TRP 20 -3.102 31.792 8.859 1.00 7.37 ATOM 173 CB TRP 20 -3.887 32.337 7.624 1.00 7.37 ATOM 174 CG TRP 20 -4.944 31.477 6.826 1.00 7.37 ATOM 175 CD2 TRP 20 -5.699 31.910 5.673 1.00 7.37 ATOM 176 CE2 TRP 20 -6.514 30.814 5.268 1.00 7.37 ATOM 177 CE3 TRP 20 -5.768 33.116 4.937 1.00 7.37 ATOM 178 CD1 TRP 20 -5.333 30.172 7.053 1.00 7.37 ATOM 179 NE1 TRP 20 -6.264 29.778 6.126 1.00 7.37 ATOM 181 CZ2 TRP 20 -7.391 30.885 4.157 1.00 7.37 ATOM 182 CZ3 TRP 20 -6.646 33.190 3.827 1.00 7.37 ATOM 183 CH2 TRP 20 -7.444 32.073 3.453 1.00 7.37 ATOM 184 C TRP 20 -4.002 31.178 9.949 1.00 7.37 ATOM 185 O TRP 20 -4.419 31.863 10.889 1.00 7.37 ATOM 186 N ALA 21 -4.230 29.866 9.815 1.00 7.35 ATOM 188 CA ALA 21 -5.047 29.053 10.724 1.00 7.35 ATOM 189 CB ALA 21 -5.332 27.735 10.048 1.00 7.35 ATOM 190 C ALA 21 -4.430 28.806 12.118 1.00 7.35 ATOM 191 O ALA 21 -5.072 29.083 13.143 1.00 7.35 ATOM 192 N SER 22 -3.164 28.360 12.129 1.00 7.61 ATOM 194 CA SER 22 -2.396 28.044 13.348 1.00 7.61 ATOM 195 CB SER 22 -1.150 27.219 12.988 1.00 7.61 ATOM 196 OG SER 22 -0.503 26.705 14.141 1.00 7.61 ATOM 198 C SER 22 -2.002 29.272 14.188 1.00 7.61 ATOM 199 O SER 22 -2.213 29.275 15.407 1.00 7.61 ATOM 200 N LEU 23 -1.480 30.312 13.520 1.00 7.50 ATOM 202 CA LEU 23 -1.033 31.569 14.154 1.00 7.50 ATOM 203 CB LEU 23 -0.159 32.394 13.154 1.00 7.50 ATOM 204 CG LEU 23 0.330 33.878 13.100 1.00 7.50 ATOM 205 CD1 LEU 23 -0.726 34.780 12.451 1.00 7.50 ATOM 206 CD2 LEU 23 0.783 34.453 14.455 1.00 7.50 ATOM 207 C LEU 23 -2.163 32.433 14.738 1.00 7.50 ATOM 208 O LEU 23 -2.076 32.845 15.898 1.00 7.50 ATOM 209 N ALA 24 -3.228 32.644 13.955 1.00 7.72 ATOM 211 CA ALA 24 -4.384 33.465 14.350 1.00 7.72 ATOM 212 CB ALA 24 -5.306 33.648 13.178 1.00 7.72 ATOM 213 C ALA 24 -5.155 32.879 15.530 1.00 7.72 ATOM 214 O ALA 24 -5.632 33.627 16.392 1.00 7.72 ATOM 215 N ALA 25 -5.279 31.546 15.553 1.00 7.72 ATOM 217 CA ALA 25 -5.995 30.846 16.621 1.00 7.72 ATOM 218 CB ALA 25 -6.323 29.431 16.162 1.00 7.72 ATOM 219 C ALA 25 -5.309 30.817 18.002 1.00 7.72 ATOM 220 O ALA 25 -5.927 31.250 18.980 1.00 7.72 ATOM 221 N ASN 26 -4.063 30.322 18.090 1.00 7.31 ATOM 223 CA ASN 26 -3.352 30.269 19.385 1.00 7.31 ATOM 224 CB ASN 26 -2.444 29.025 19.426 1.00 7.31 ATOM 225 CG ASN 26 -3.229 27.717 19.421 1.00 7.31 ATOM 226 OD1 ASN 26 -3.514 27.155 18.361 1.00 7.31 ATOM 227 ND2 ASN 26 -3.565 27.219 20.607 1.00 7.31 ATOM 230 C ASN 26 -2.595 31.475 20.001 1.00 7.31 ATOM 231 O ASN 26 -2.983 31.956 21.072 1.00 7.31 ATOM 232 N GLU 27 -1.544 31.950 19.316 1.00 7.93 ATOM 234 CA GLU 27 -0.675 33.071 19.750 1.00 7.93 ATOM 235 CG GLU 27 1.442 31.718 20.251 1.00 7.93 ATOM 236 CD GLU 27 2.883 31.430 19.871 1.00 7.93 ATOM 237 OE1 GLU 27 3.781 32.183 20.305 1.00 7.93 ATOM 238 OE2 GLU 27 3.120 30.441 19.147 1.00 7.93 ATOM 239 C GLU 27 -1.007 34.559 19.532 1.00 7.93 ATOM 240 O GLU 27 -0.879 35.380 20.455 1.00 7.93 ATOM 241 CB GLU 27 0.781 32.785 19.369 1.00 7.93 ATOM 242 N LEU 28 -1.400 34.873 18.280 1.00 9.24 ATOM 244 CA LEU 28 -1.732 36.215 17.721 1.00 9.24 ATOM 245 CB LEU 28 -3.100 36.775 18.202 1.00 9.24 ATOM 246 CG LEU 28 -3.624 37.038 19.636 1.00 9.24 ATOM 247 CD1 LEU 28 -3.134 38.381 20.203 1.00 9.24 ATOM 248 CD2 LEU 28 -5.144 37.029 19.600 1.00 9.24 ATOM 249 C LEU 28 -0.619 37.286 17.770 1.00 9.24 ATOM 250 O LEU 28 0.075 37.408 18.785 1.00 9.24 ATOM 251 N ARG 29 -0.472 38.035 16.666 1.00 9.89 ATOM 253 CA ARG 29 0.548 39.091 16.492 1.00 9.89 ATOM 254 CB ARG 29 1.211 38.935 15.104 1.00 9.89 ATOM 255 CG ARG 29 2.529 39.700 14.874 1.00 9.89 ATOM 256 CD ARG 29 3.070 39.459 13.472 1.00 9.89 ATOM 257 NE ARG 29 4.325 40.178 13.236 1.00 9.89 ATOM 259 CZ ARG 29 5.022 40.152 12.099 1.00 9.89 ATOM 260 NH1 ARG 29 6.146 40.847 12.007 1.00 9.89 ATOM 263 NH2 ARG 29 4.610 39.439 11.055 1.00 9.89 ATOM 266 C ARG 29 -0.011 40.523 16.664 1.00 9.89 ATOM 267 O ARG 29 0.589 41.335 17.381 1.00 9.89 ATOM 268 N VAL 30 -1.135 40.818 15.996 1.00 10.63 ATOM 270 CA VAL 30 -1.783 42.147 16.022 1.00 10.63 ATOM 271 CB VAL 30 -2.330 42.557 14.593 1.00 10.63 ATOM 272 CG1 VAL 30 -2.551 44.079 14.497 1.00 10.63 ATOM 273 CG2 VAL 30 -1.370 42.110 13.489 1.00 10.63 ATOM 274 C VAL 30 -2.907 42.229 17.083 1.00 10.63 ATOM 275 O VAL 30 -3.640 41.254 17.301 1.00 10.63 ATOM 276 N THR 31 -2.995 43.395 17.743 1.00 11.26 ATOM 278 CA THR 31 -3.990 43.706 18.790 1.00 11.26 ATOM 279 CB THR 31 -3.310 44.319 20.058 1.00 11.26 ATOM 280 OG1 THR 31 -2.427 45.380 19.671 1.00 11.26 ATOM 282 CG2 THR 31 -2.528 43.255 20.818 1.00 11.26 ATOM 283 C THR 31 -5.060 44.680 18.248 1.00 11.26 ATOM 284 O THR 31 -6.131 44.841 18.854 1.00 11.26 ATOM 285 N GLU 32 -4.777 45.263 17.073 1.00 12.64 ATOM 287 CA GLU 32 -5.653 46.230 16.371 1.00 12.64 ATOM 288 CB GLU 32 -4.887 46.915 15.231 1.00 12.64 ATOM 289 CG GLU 32 -3.785 47.870 15.683 1.00 12.64 ATOM 290 CD GLU 32 -3.060 48.521 14.519 1.00 12.64 ATOM 291 OE1 GLU 32 -3.496 49.603 14.074 1.00 12.64 ATOM 292 OE2 GLU 32 -2.052 47.950 14.050 1.00 12.64 ATOM 293 C GLU 32 -6.931 45.587 15.807 1.00 12.64 ATOM 294 O GLU 32 -7.994 46.221 15.792 1.00 12.64 ATOM 295 N ARG 33 -6.805 44.331 15.360 1.00 12.14 ATOM 297 CA ARG 33 -7.907 43.533 14.795 1.00 12.14 ATOM 298 CB ARG 33 -7.470 42.814 13.484 1.00 12.14 ATOM 299 CG ARG 33 -6.004 42.253 13.367 1.00 12.14 ATOM 300 CD ARG 33 -5.722 40.917 14.104 1.00 12.14 ATOM 301 NE ARG 33 -6.408 39.759 13.530 1.00 12.14 ATOM 303 CZ ARG 33 -6.277 38.505 13.967 1.00 12.14 ATOM 304 NH1 ARG 33 -6.944 37.526 13.373 1.00 12.14 ATOM 307 NH2 ARG 33 -5.486 38.217 14.997 1.00 12.14 ATOM 310 C ARG 33 -8.440 42.497 15.815 1.00 12.14 ATOM 311 O ARG 33 -7.636 41.930 16.567 1.00 12.14 ATOM 312 N PRO 34 -9.787 42.251 15.874 1.00 12.30 ATOM 313 CD PRO 34 -10.910 42.997 15.254 1.00 12.30 ATOM 314 CA PRO 34 -10.309 41.257 16.837 1.00 12.30 ATOM 315 CB PRO 34 -11.833 41.469 16.767 1.00 12.30 ATOM 316 CG PRO 34 -12.060 42.043 15.385 1.00 12.30 ATOM 317 C PRO 34 -9.881 39.794 16.529 1.00 12.30 ATOM 318 O PRO 34 -9.228 39.152 17.362 1.00 12.30 ATOM 319 N PHE 35 -10.244 39.308 15.330 1.00 10.50 ATOM 321 CA PHE 35 -9.934 37.958 14.814 1.00 10.50 ATOM 322 CB PHE 35 -10.918 36.883 15.384 1.00 10.50 ATOM 323 CG PHE 35 -10.614 36.414 16.807 1.00 10.50 ATOM 324 CD1 PHE 35 -11.352 36.920 17.904 1.00 10.50 ATOM 325 CD2 PHE 35 -9.624 35.433 17.058 1.00 10.50 ATOM 326 CE1 PHE 35 -11.112 36.460 19.228 1.00 10.50 ATOM 327 CE2 PHE 35 -9.371 34.963 18.376 1.00 10.50 ATOM 328 CZ PHE 35 -10.118 35.479 19.465 1.00 10.50 ATOM 329 C PHE 35 -9.998 37.977 13.266 1.00 10.50 ATOM 330 O PHE 35 -10.718 37.171 12.660 1.00 10.50 ATOM 331 N TRP 36 -9.231 38.884 12.636 1.00 8.85 ATOM 333 CA TRP 36 -9.190 39.045 11.161 1.00 8.85 ATOM 334 CB TRP 36 -8.554 40.399 10.779 1.00 8.85 ATOM 335 CG TRP 36 -9.542 41.495 10.306 1.00 8.85 ATOM 336 CD2 TRP 36 -9.951 41.783 8.949 1.00 8.85 ATOM 337 CE2 TRP 36 -10.838 42.895 9.006 1.00 8.85 ATOM 338 CE3 TRP 36 -9.656 41.211 7.689 1.00 8.85 ATOM 339 CD1 TRP 36 -10.185 42.424 11.095 1.00 8.85 ATOM 340 NE1 TRP 36 -10.957 43.257 10.322 1.00 8.85 ATOM 342 CZ2 TRP 36 -11.439 43.452 7.851 1.00 8.85 ATOM 343 CZ3 TRP 36 -10.256 41.767 6.531 1.00 8.85 ATOM 344 CH2 TRP 36 -11.138 42.879 6.629 1.00 8.85 ATOM 345 C TRP 36 -8.561 37.908 10.327 1.00 8.85 ATOM 346 O TRP 36 -9.181 37.456 9.357 1.00 8.85 ATOM 347 N ILE 37 -7.364 37.439 10.716 1.00 8.84 ATOM 349 CA ILE 37 -6.640 36.326 10.044 1.00 8.84 ATOM 350 CB ILE 37 -5.146 36.174 10.540 1.00 8.84 ATOM 351 CG2 ILE 37 -4.321 35.386 9.504 1.00 8.84 ATOM 352 CG1 ILE 37 -4.491 37.558 10.722 1.00 8.84 ATOM 353 CD1 ILE 37 -3.470 37.656 11.870 1.00 8.84 ATOM 354 C ILE 37 -7.453 35.043 10.338 1.00 8.84 ATOM 355 O ILE 37 -7.543 34.133 9.501 1.00 8.84 ATOM 356 N SER 38 -8.038 35.016 11.545 1.00 8.88 ATOM 358 CA SER 38 -8.888 33.934 12.063 1.00 8.88 ATOM 359 CB SER 38 -9.168 34.174 13.549 1.00 8.88 ATOM 360 OG SER 38 -9.865 33.087 14.136 1.00 8.88 ATOM 362 C SER 38 -10.193 33.879 11.241 1.00 8.88 ATOM 363 O SER 38 -10.748 32.796 11.020 1.00 8.88 ATOM 364 N SER 39 -10.672 35.064 10.829 1.00 8.18 ATOM 366 CA SER 39 -11.875 35.252 9.989 1.00 8.18 ATOM 367 CB SER 39 -12.280 36.733 9.944 1.00 8.18 ATOM 368 OG SER 39 -13.531 36.917 9.299 1.00 8.18 ATOM 370 C SER 39 -11.595 34.736 8.565 1.00 8.18 ATOM 371 O SER 39 -12.496 34.192 7.913 1.00 8.18 ATOM 372 N PHE 40 -10.345 34.925 8.105 1.00 7.95 ATOM 374 CA PHE 40 -9.861 34.490 6.775 1.00 7.95 ATOM 375 CB PHE 40 -8.391 34.943 6.545 1.00 7.95 ATOM 376 CG PHE 40 -8.239 36.276 5.811 1.00 7.95 ATOM 377 CD1 PHE 40 -8.234 36.330 4.395 1.00 7.95 ATOM 378 CD2 PHE 40 -8.056 37.481 6.528 1.00 7.95 ATOM 379 CE1 PHE 40 -8.051 37.559 3.706 1.00 7.95 ATOM 380 CE2 PHE 40 -7.871 38.720 5.853 1.00 7.95 ATOM 381 CZ PHE 40 -7.869 38.758 4.438 1.00 7.95 ATOM 382 C PHE 40 -9.966 32.965 6.617 1.00 7.95 ATOM 383 O PHE 40 -10.455 32.486 5.587 1.00 7.95 ATOM 384 N ILE 41 -9.505 32.222 7.637 1.00 8.55 ATOM 386 CA ILE 41 -9.575 30.748 7.671 1.00 8.55 ATOM 387 CB ILE 41 -8.510 30.090 8.694 1.00 8.55 ATOM 388 CG2 ILE 41 -8.566 30.744 10.078 1.00 8.55 ATOM 389 CG1 ILE 41 -8.672 28.553 8.821 1.00 8.55 ATOM 390 CD1 ILE 41 -8.054 27.688 7.695 1.00 8.55 ATOM 391 C ILE 41 -11.026 30.243 7.882 1.00 8.55 ATOM 392 O ILE 41 -11.472 29.330 7.183 1.00 8.55 ATOM 393 N GLY 42 -11.730 30.858 8.840 1.00 8.91 ATOM 395 CA GLY 42 -13.104 30.488 9.161 1.00 8.91 ATOM 396 C GLY 42 -13.211 29.804 10.514 1.00 8.91 ATOM 397 O GLY 42 -12.997 28.589 10.608 1.00 8.91 ATOM 398 N ARG 43 -13.532 30.593 11.554 1.00 9.52 ATOM 400 CA ARG 43 -13.691 30.179 12.976 1.00 9.52 ATOM 401 CB ARG 43 -14.814 29.132 13.164 1.00 9.52 ATOM 402 CG ARG 43 -16.220 29.643 12.848 1.00 9.52 ATOM 403 CD ARG 43 -17.281 28.553 12.991 1.00 9.52 ATOM 404 NE ARG 43 -17.519 28.166 14.385 1.00 9.52 ATOM 406 CZ ARG 43 -18.424 27.275 14.791 1.00 9.52 ATOM 407 NH1 ARG 43 -18.545 27.009 16.084 1.00 9.52 ATOM 410 NH2 ARG 43 -19.210 26.646 13.922 1.00 9.52 ATOM 413 C ARG 43 -12.407 29.726 13.702 1.00 9.52 ATOM 414 O ARG 43 -12.273 29.949 14.912 1.00 9.52 ATOM 415 N SER 44 -11.467 29.132 12.944 1.00 9.12 ATOM 417 CA SER 44 -10.145 28.608 13.391 1.00 9.12 ATOM 418 CB SER 44 -9.170 29.746 13.769 1.00 9.12 ATOM 419 OG SER 44 -9.643 30.500 14.873 1.00 9.12 ATOM 421 C SER 44 -10.121 27.506 14.471 1.00 9.12 ATOM 422 O SER 44 -9.381 26.524 14.328 1.00 9.12 ATOM 423 N LYS 45 -10.925 27.676 15.530 1.00 8.14 ATOM 425 CA LYS 45 -11.022 26.725 16.655 1.00 8.14 ATOM 426 CG LYS 45 -9.695 28.135 18.359 1.00 8.14 ATOM 427 CD LYS 45 -9.781 28.848 19.699 1.00 8.14 ATOM 428 CE LYS 45 -8.461 29.509 20.059 1.00 8.14 ATOM 429 NZ LYS 45 -8.530 30.211 21.370 1.00 8.14 ATOM 433 C LYS 45 -12.262 25.823 16.569 1.00 8.14 ATOM 434 O LYS 45 -12.194 24.643 16.936 1.00 8.14 ATOM 435 CB LYS 45 -11.020 27.472 17.998 1.00 8.14 TER END