####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS023_3-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS023_3-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 21 5 - 25 4.85 14.19 LONGEST_CONTINUOUS_SEGMENT: 21 6 - 26 4.88 13.55 LONGEST_CONTINUOUS_SEGMENT: 21 16 - 36 5.00 10.38 LONGEST_CONTINUOUS_SEGMENT: 21 17 - 37 4.74 10.33 LONGEST_CONTINUOUS_SEGMENT: 21 18 - 38 4.89 10.18 LCS_AVERAGE: 45.51 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 8 - 19 1.89 18.70 LONGEST_CONTINUOUS_SEGMENT: 12 9 - 20 1.80 18.58 LCS_AVERAGE: 19.94 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 20 - 29 0.49 11.42 LCS_AVERAGE: 15.44 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 4 16 4 4 4 5 6 7 9 9 11 17 20 23 24 27 29 32 32 34 35 36 LCS_GDT V 3 V 3 3 7 20 3 3 4 5 6 8 9 12 16 19 22 24 27 28 30 33 34 34 35 36 LCS_GDT Q 4 Q 4 3 7 20 3 3 4 5 6 8 9 10 10 13 19 22 27 27 30 33 34 34 35 36 LCS_GDT G 5 G 5 4 7 21 0 3 4 5 6 8 9 14 15 17 19 21 27 27 30 33 34 34 35 36 LCS_GDT P 6 P 6 4 7 21 3 4 4 5 6 8 11 14 17 17 19 22 27 27 30 33 34 34 35 36 LCS_GDT W 7 W 7 4 7 21 3 4 4 5 9 10 13 14 17 20 22 24 27 28 30 33 34 34 35 36 LCS_GDT V 8 V 8 4 12 21 3 4 4 5 9 12 13 14 17 20 22 24 27 28 30 33 34 34 35 36 LCS_GDT G 9 G 9 9 12 21 4 9 9 10 10 12 13 14 17 20 22 24 27 28 30 33 34 34 35 36 LCS_GDT S 10 S 10 9 12 21 5 9 9 10 12 13 13 15 15 19 22 24 26 28 30 33 34 34 35 36 LCS_GDT S 11 S 11 9 12 21 5 9 9 10 10 12 13 15 17 18 22 24 26 28 30 33 34 34 35 36 LCS_GDT Y 12 Y 12 9 12 21 5 9 9 10 10 12 13 14 17 18 22 24 26 28 30 33 34 34 35 36 LCS_GDT V 13 V 13 9 12 21 5 9 9 10 10 12 13 15 17 19 22 24 26 28 30 33 34 34 35 36 LCS_GDT A 14 A 14 9 12 21 5 9 9 10 10 12 13 13 15 17 20 23 26 28 30 33 34 34 35 36 LCS_GDT E 15 E 15 9 12 21 4 9 9 10 10 12 13 13 15 17 19 21 24 25 28 32 32 33 35 35 LCS_GDT T 16 T 16 9 12 21 4 9 9 10 10 12 13 13 15 17 20 23 26 28 30 33 34 34 35 36 LCS_GDT G 17 G 17 9 12 21 3 9 9 10 10 12 13 14 16 18 21 24 26 28 30 33 34 34 35 36 LCS_GDT Q 18 Q 18 5 12 21 3 4 8 10 10 12 13 15 17 19 22 24 27 28 30 33 34 34 35 36 LCS_GDT N 19 N 19 4 12 21 3 5 8 9 10 12 13 15 17 20 22 24 27 28 30 33 34 34 35 36 LCS_GDT W 20 W 20 10 12 21 6 10 10 10 12 13 13 15 16 20 21 24 27 27 29 32 34 34 35 36 LCS_GDT A 21 A 21 10 10 21 8 10 10 10 12 13 13 15 17 20 22 24 27 28 30 33 34 34 35 36 LCS_GDT S 22 S 22 10 10 21 5 10 10 10 12 13 13 15 17 20 22 24 27 28 30 33 34 34 35 36 LCS_GDT L 23 L 23 10 10 21 8 10 10 10 12 13 13 15 17 20 22 24 27 28 30 33 34 34 35 36 LCS_GDT A 24 A 24 10 10 21 8 10 10 10 12 13 13 15 17 20 22 24 27 28 30 33 34 34 35 36 LCS_GDT A 25 A 25 10 10 21 8 10 10 10 12 13 13 15 17 20 22 24 27 28 30 33 34 34 35 36 LCS_GDT N 26 N 26 10 10 21 8 10 10 10 12 13 13 15 17 20 22 24 27 28 30 33 34 34 35 36 LCS_GDT E 27 E 27 10 10 21 8 10 10 10 12 13 13 15 15 20 22 24 27 28 30 33 34 34 35 36 LCS_GDT L 28 L 28 10 10 21 8 10 10 10 12 13 13 15 15 17 20 23 27 28 30 33 34 34 35 36 LCS_GDT R 29 R 29 10 10 21 8 10 10 10 12 13 13 15 17 20 22 24 27 28 30 33 34 34 35 36 LCS_GDT V 30 V 30 5 6 21 4 5 5 5 6 8 13 14 17 20 22 24 27 28 30 33 34 34 35 36 LCS_GDT T 31 T 31 5 6 21 4 5 5 5 9 10 13 15 17 20 22 24 27 28 30 33 34 34 35 36 LCS_GDT E 32 E 32 5 6 21 4 5 5 5 9 10 13 15 17 20 22 24 27 28 30 33 34 34 35 36 LCS_GDT R 33 R 33 5 6 21 4 5 5 7 9 10 13 15 17 20 22 24 27 28 30 33 34 34 35 36 LCS_GDT P 34 P 34 5 6 21 2 5 5 5 7 10 13 14 17 20 22 24 27 28 30 33 34 34 35 36 LCS_GDT F 35 F 35 3 4 21 3 3 3 4 6 9 11 15 17 20 22 24 27 28 30 33 34 34 35 36 LCS_GDT W 36 W 36 6 7 21 4 5 8 9 10 11 11 15 17 20 22 24 27 28 30 33 34 34 35 36 LCS_GDT I 37 I 37 6 7 21 4 5 8 9 11 11 11 15 17 19 22 24 27 28 30 33 34 34 35 36 LCS_GDT S 38 S 38 6 7 21 4 5 8 9 10 11 11 13 15 17 20 23 24 26 29 32 32 34 35 36 LCS_GDT S 39 S 39 6 7 16 4 5 8 9 10 13 13 15 15 17 20 23 24 26 29 32 32 33 35 36 LCS_GDT F 40 F 40 6 7 16 3 5 8 9 12 13 13 15 15 17 20 21 24 26 29 32 32 33 35 36 LCS_GDT I 41 I 41 6 7 16 3 4 6 8 10 11 11 11 12 15 18 20 21 21 24 27 28 30 31 33 LCS_GDT G 42 G 42 5 7 16 3 4 5 6 10 11 11 11 12 15 18 20 20 21 22 24 27 29 31 32 LCS_GDT R 43 R 43 5 6 16 3 4 5 6 6 7 9 11 12 15 18 20 20 21 22 24 27 29 31 32 LCS_GDT S 44 S 44 5 6 16 3 4 5 6 6 7 8 8 11 12 14 14 15 15 21 21 23 24 26 27 LCS_GDT K 45 K 45 5 6 15 3 4 5 6 6 7 8 8 9 11 14 14 15 15 15 15 18 20 26 27 LCS_AVERAGE LCS_A: 26.96 ( 15.44 19.94 45.51 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 8 10 10 10 12 13 13 15 17 20 22 24 27 28 30 33 34 34 35 36 GDT PERCENT_AT 18.18 22.73 22.73 22.73 27.27 29.55 29.55 34.09 38.64 45.45 50.00 54.55 61.36 63.64 68.18 75.00 77.27 77.27 79.55 81.82 GDT RMS_LOCAL 0.28 0.49 0.49 0.49 1.36 1.74 1.74 2.58 3.20 3.73 4.02 4.22 4.62 4.84 5.08 5.52 5.64 5.64 5.84 6.11 GDT RMS_ALL_AT 11.68 11.42 11.42 11.42 11.05 10.72 10.72 10.24 10.96 11.12 10.57 10.55 10.73 10.08 10.25 10.12 10.17 10.17 10.17 9.92 # Checking swapping # possible swapping detected: E 15 E 15 # possible swapping detected: E 27 E 27 # possible swapping detected: E 32 E 32 # possible swapping detected: F 35 F 35 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 6.865 0 0.100 0.159 8.981 0.000 0.000 - LGA V 3 V 3 9.685 0 0.039 1.129 13.210 0.000 0.000 10.542 LGA Q 4 Q 4 16.395 0 0.613 1.076 22.121 0.000 0.000 22.121 LGA G 5 G 5 19.700 0 0.115 0.115 19.914 0.000 0.000 - LGA P 6 P 6 21.012 0 0.711 0.614 24.293 0.000 0.000 24.293 LGA W 7 W 7 15.618 0 0.292 1.228 18.058 0.000 0.000 18.058 LGA V 8 V 8 11.807 0 0.616 0.643 15.604 0.000 0.000 11.221 LGA G 9 G 9 6.788 0 0.426 0.426 8.344 9.545 9.545 - LGA S 10 S 10 1.686 0 0.068 0.167 3.919 32.727 31.212 2.382 LGA S 11 S 11 5.701 0 0.063 0.709 8.848 4.545 3.030 7.780 LGA Y 12 Y 12 8.255 0 0.049 1.159 14.104 0.000 0.000 14.104 LGA V 13 V 13 4.302 0 0.064 0.183 8.730 2.727 11.429 5.660 LGA A 14 A 14 10.373 0 0.030 0.036 14.499 0.000 0.000 - LGA E 15 E 15 14.700 0 0.058 0.712 20.998 0.000 0.000 20.998 LGA T 16 T 16 12.983 0 0.082 1.085 13.817 0.000 0.000 9.658 LGA G 17 G 17 12.802 0 0.684 0.684 12.802 0.000 0.000 - LGA Q 18 Q 18 9.054 0 0.630 1.606 11.938 0.000 0.000 9.558 LGA N 19 N 19 4.525 0 0.103 1.244 8.663 12.727 7.045 6.193 LGA W 20 W 20 2.675 0 0.642 1.117 7.549 40.909 11.688 7.436 LGA A 21 A 21 2.554 0 0.031 0.040 2.658 32.727 31.636 - LGA S 22 S 22 2.352 0 0.027 0.666 2.615 41.364 40.606 1.940 LGA L 23 L 23 2.300 0 0.047 0.951 6.835 44.545 25.682 6.657 LGA A 24 A 24 1.808 0 0.043 0.049 2.037 58.182 54.182 - LGA A 25 A 25 0.388 0 0.044 0.052 1.008 86.818 85.818 - LGA N 26 N 26 0.811 0 0.022 1.271 4.350 82.273 61.136 4.350 LGA E 27 E 27 1.232 0 0.083 1.064 5.290 56.364 33.131 5.290 LGA L 28 L 28 2.252 0 0.214 1.227 7.046 36.364 23.409 4.783 LGA R 29 R 29 2.456 0 0.313 1.628 13.631 23.182 8.595 13.631 LGA V 30 V 30 7.744 0 0.613 0.525 12.415 0.000 0.000 12.415 LGA T 31 T 31 8.633 0 0.146 0.277 12.868 0.000 0.000 10.146 LGA E 32 E 32 13.935 0 0.131 1.233 16.046 0.000 0.000 15.868 LGA R 33 R 33 15.290 0 0.090 1.094 19.009 0.000 0.000 10.704 LGA P 34 P 34 17.818 0 0.075 0.085 20.044 0.000 0.000 20.044 LGA F 35 F 35 14.683 0 0.598 0.434 17.166 0.000 0.000 16.208 LGA W 36 W 36 11.761 0 0.609 1.379 15.283 0.000 0.000 15.265 LGA I 37 I 37 7.269 0 0.075 0.926 9.544 1.364 0.682 7.475 LGA S 38 S 38 6.786 0 0.122 0.130 8.736 7.273 4.848 8.736 LGA S 39 S 39 2.879 0 0.155 0.693 7.475 20.455 13.636 7.475 LGA F 40 F 40 2.929 0 0.102 1.640 7.096 23.636 21.322 4.086 LGA I 41 I 41 7.416 0 0.603 0.911 10.925 0.455 0.227 10.867 LGA G 42 G 42 9.979 0 0.091 0.091 11.175 0.000 0.000 - LGA R 43 R 43 8.265 0 0.033 1.279 10.168 0.000 0.165 7.087 LGA S 44 S 44 13.577 0 0.054 0.689 15.126 0.000 0.000 14.074 LGA K 45 K 45 16.289 0 0.593 0.935 27.081 0.000 0.000 27.081 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 9.303 9.287 10.227 14.050 10.887 2.909 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 15 2.58 38.636 33.314 0.560 LGA_LOCAL RMSD: 2.581 Number of atoms: 15 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 10.239 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 9.303 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.851218 * X + 0.479100 * Y + 0.214220 * Z + 6.696740 Y_new = -0.116939 * X + -0.571072 * Y + 0.812528 * Z + 34.399506 Z_new = 0.511618 * X + 0.666588 * Y + 0.542132 * Z + 9.787535 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -3.005068 -0.537066 0.888002 [DEG: -172.1777 -30.7716 50.8787 ] ZXZ: 2.883813 0.997824 0.654618 [DEG: 165.2303 57.1711 37.5068 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS023_3-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS023_3-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 15 2.58 33.314 9.30 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS023_3-D1 PFRMAT TS TARGET T0953s2 MODEL 3 PARENT N/A ATOM 9 N ALA 2 4.823 33.088 12.480 1.00 9.30 ATOM 10 CA ALA 2 4.975 32.243 13.626 1.00 9.30 ATOM 11 CB ALA 2 5.216 33.016 14.935 1.00 9.30 ATOM 12 C ALA 2 3.712 31.479 13.793 1.00 9.30 ATOM 13 O ALA 2 2.620 32.042 13.801 1.00 9.30 ATOM 14 N VAL 3 3.840 30.153 13.956 1.00 9.68 ATOM 15 CA VAL 3 2.683 29.324 14.044 1.00 9.68 ATOM 16 CB VAL 3 2.713 28.212 13.062 1.00 9.68 ATOM 17 CG1 VAL 3 3.975 27.372 13.357 1.00 9.68 ATOM 18 CG2 VAL 3 1.391 27.427 13.151 1.00 9.68 ATOM 19 C VAL 3 2.631 28.647 15.374 1.00 9.68 ATOM 20 O VAL 3 3.641 28.200 15.914 1.00 9.68 ATOM 21 N GLN 4 1.431 28.606 15.976 1.00 8.89 ATOM 22 CA GLN 4 1.295 27.807 17.152 1.00 8.89 ATOM 23 CB GLN 4 -0.002 28.068 17.941 1.00 8.89 ATOM 24 CG GLN 4 -0.070 27.275 19.249 1.00 8.89 ATOM 25 CD GLN 4 -1.277 27.752 20.049 1.00 8.89 ATOM 26 OE1 GLN 4 -1.457 27.377 21.207 1.00 8.89 ATOM 27 NE2 GLN 4 -2.123 28.612 19.421 1.00 8.89 ATOM 28 C GLN 4 1.307 26.382 16.698 1.00 8.89 ATOM 29 O GLN 4 1.893 25.518 17.347 1.00 8.89 ATOM 30 N GLY 5 0.655 26.112 15.545 1.00 9.07 ATOM 31 CA GLY 5 0.538 24.779 15.023 1.00 9.07 ATOM 32 C GLY 5 1.871 24.323 14.527 1.00 9.07 ATOM 33 O GLY 5 2.599 25.070 13.881 1.00 9.07 ATOM 34 N PRO 6 2.214 23.099 14.805 1.00 9.91 ATOM 35 CA PRO 6 3.468 22.625 14.301 1.00 9.91 ATOM 36 CD PRO 6 1.920 22.545 16.116 1.00 9.91 ATOM 37 CB PRO 6 3.870 21.444 15.178 1.00 9.91 ATOM 38 CG PRO 6 3.169 21.740 16.517 1.00 9.91 ATOM 39 C PRO 6 3.325 22.289 12.854 1.00 9.91 ATOM 40 O PRO 6 2.231 21.897 12.447 1.00 9.91 ATOM 41 N TRP 7 4.425 22.402 12.081 1.00 9.80 ATOM 42 CA TRP 7 4.439 22.063 10.687 1.00 9.80 ATOM 43 CB TRP 7 3.682 20.742 10.431 1.00 9.80 ATOM 44 CG TRP 7 3.668 20.212 9.016 1.00 9.80 ATOM 45 CD2 TRP 7 4.709 19.388 8.469 1.00 9.80 ATOM 46 CD1 TRP 7 2.731 20.353 8.034 1.00 9.80 ATOM 47 NE1 TRP 7 3.117 19.658 6.911 1.00 9.80 ATOM 48 CE2 TRP 7 4.335 19.062 7.165 1.00 9.80 ATOM 49 CE3 TRP 7 5.875 18.933 9.014 1.00 9.80 ATOM 50 CZ2 TRP 7 5.128 18.272 6.383 1.00 9.80 ATOM 51 CZ3 TRP 7 6.676 18.145 8.219 1.00 9.80 ATOM 52 CH2 TRP 7 6.309 17.821 6.930 1.00 9.80 ATOM 53 C TRP 7 3.819 23.153 9.861 1.00 9.80 ATOM 54 O TRP 7 3.709 23.006 8.645 1.00 9.80 ATOM 55 N VAL 8 3.414 24.294 10.456 1.00 9.73 ATOM 56 CA VAL 8 2.871 25.276 9.564 1.00 9.73 ATOM 57 CB VAL 8 1.448 25.613 9.875 1.00 9.73 ATOM 58 CG1 VAL 8 0.965 26.672 8.872 1.00 9.73 ATOM 59 CG2 VAL 8 0.621 24.315 9.882 1.00 9.73 ATOM 60 C VAL 8 3.681 26.529 9.683 1.00 9.73 ATOM 61 O VAL 8 3.594 27.227 10.683 1.00 9.73 ATOM 62 N GLY 9 4.496 26.872 8.670 1.00 8.24 ATOM 63 CA GLY 9 5.266 28.081 8.777 1.00 8.24 ATOM 64 C GLY 9 4.705 29.069 7.818 1.00 8.24 ATOM 65 O GLY 9 3.533 29.015 7.477 1.00 8.24 ATOM 66 N SER 10 5.523 30.023 7.345 1.00 8.46 ATOM 67 CA SER 10 5.005 30.958 6.388 1.00 8.46 ATOM 68 CB SER 10 6.011 32.063 6.023 1.00 8.46 ATOM 69 OG SER 10 7.140 31.498 5.374 1.00 8.46 ATOM 70 C SER 10 4.695 30.192 5.138 1.00 8.46 ATOM 71 O SER 10 3.730 30.490 4.435 1.00 8.46 ATOM 72 N SER 11 5.529 29.183 4.821 1.00 8.67 ATOM 73 CA SER 11 5.342 28.389 3.641 1.00 8.67 ATOM 74 CB SER 11 6.463 27.352 3.451 1.00 8.67 ATOM 75 OG SER 11 7.724 28.000 3.369 1.00 8.67 ATOM 76 C SER 11 4.062 27.619 3.759 1.00 8.67 ATOM 77 O SER 11 3.202 27.692 2.882 1.00 8.67 ATOM 78 N TYR 12 3.918 26.857 4.861 1.00 7.90 ATOM 79 CA TYR 12 2.767 26.028 5.092 1.00 7.90 ATOM 80 CB TYR 12 2.881 25.122 6.331 1.00 7.90 ATOM 81 CG TYR 12 3.838 24.024 6.021 1.00 7.90 ATOM 82 CD1 TYR 12 3.375 22.860 5.451 1.00 7.90 ATOM 83 CD2 TYR 12 5.181 24.152 6.289 1.00 7.90 ATOM 84 CE1 TYR 12 4.240 21.832 5.161 1.00 7.90 ATOM 85 CE2 TYR 12 6.049 23.126 6.002 1.00 7.90 ATOM 86 CZ TYR 12 5.578 21.966 5.439 1.00 7.90 ATOM 87 OH TYR 12 6.464 20.910 5.143 1.00 7.90 ATOM 88 C TYR 12 1.545 26.865 5.282 1.00 7.90 ATOM 89 O TYR 12 0.471 26.527 4.793 1.00 7.90 ATOM 90 N VAL 13 1.677 27.981 6.017 1.00 7.71 ATOM 91 CA VAL 13 0.576 28.852 6.309 1.00 7.71 ATOM 92 CB VAL 13 0.910 30.051 7.157 1.00 7.71 ATOM 93 CG1 VAL 13 -0.262 31.042 7.045 1.00 7.71 ATOM 94 CG2 VAL 13 1.116 29.600 8.613 1.00 7.71 ATOM 95 C VAL 13 0.037 29.375 5.029 1.00 7.71 ATOM 96 O VAL 13 -1.168 29.568 4.908 1.00 7.71 ATOM 97 N ALA 14 0.910 29.658 4.049 1.00 7.33 ATOM 98 CA ALA 14 0.423 30.172 2.804 1.00 7.33 ATOM 99 CB ALA 14 1.548 30.515 1.815 1.00 7.33 ATOM 100 C ALA 14 -0.444 29.139 2.156 1.00 7.33 ATOM 101 O ALA 14 -1.505 29.457 1.622 1.00 7.33 ATOM 102 N GLU 15 -0.004 27.868 2.191 1.00 7.37 ATOM 103 CA GLU 15 -0.735 26.800 1.572 1.00 7.37 ATOM 104 CB GLU 15 0.004 25.453 1.651 1.00 7.37 ATOM 105 CG GLU 15 1.343 25.444 0.911 1.00 7.37 ATOM 106 CD GLU 15 1.067 25.396 -0.584 1.00 7.37 ATOM 107 OE1 GLU 15 0.082 24.721 -0.984 1.00 7.37 ATOM 108 OE2 GLU 15 1.837 26.037 -1.346 1.00 7.37 ATOM 109 C GLU 15 -2.033 26.624 2.295 1.00 7.37 ATOM 110 O GLU 15 -3.081 26.437 1.677 1.00 7.37 ATOM 111 N THR 16 -1.980 26.681 3.639 1.00 6.99 ATOM 112 CA THR 16 -3.133 26.488 4.468 1.00 6.99 ATOM 113 CB THR 16 -2.827 26.356 5.921 1.00 6.99 ATOM 114 OG1 THR 16 -1.904 25.300 6.142 1.00 6.99 ATOM 115 CG2 THR 16 -4.160 26.026 6.606 1.00 6.99 ATOM 116 C THR 16 -4.045 27.657 4.306 1.00 6.99 ATOM 117 O THR 16 -5.252 27.551 4.514 1.00 6.99 ATOM 118 N GLY 17 -3.479 28.824 3.961 1.00 7.45 ATOM 119 CA GLY 17 -4.273 30.001 3.813 1.00 7.45 ATOM 120 C GLY 17 -4.245 30.766 5.095 1.00 7.45 ATOM 121 O GLY 17 -3.275 30.734 5.850 1.00 7.45 ATOM 122 N GLN 18 -5.351 31.480 5.352 1.00 6.49 ATOM 123 CA GLN 18 -5.533 32.387 6.445 1.00 6.49 ATOM 124 CB GLN 18 -6.909 33.072 6.346 1.00 6.49 ATOM 125 CG GLN 18 -7.412 33.737 7.627 1.00 6.49 ATOM 126 CD GLN 18 -8.377 32.738 8.253 1.00 6.49 ATOM 127 OE1 GLN 18 -8.372 31.560 7.900 1.00 6.49 ATOM 128 NE2 GLN 18 -9.238 33.216 9.191 1.00 6.49 ATOM 129 C GLN 18 -5.423 31.716 7.781 1.00 6.49 ATOM 130 O GLN 18 -4.870 32.292 8.716 1.00 6.49 ATOM 131 N ASN 19 -5.908 30.470 7.906 1.00 7.10 ATOM 132 CA ASN 19 -6.032 29.872 9.204 1.00 7.10 ATOM 133 CB ASN 19 -6.581 28.438 9.120 1.00 7.10 ATOM 134 CG ASN 19 -7.208 28.071 10.459 1.00 7.10 ATOM 135 OD1 ASN 19 -6.563 28.126 11.504 1.00 7.10 ATOM 136 ND2 ASN 19 -8.515 27.692 10.424 1.00 7.10 ATOM 137 C ASN 19 -4.729 29.841 9.945 1.00 7.10 ATOM 138 O ASN 19 -4.658 30.287 11.089 1.00 7.10 ATOM 139 N TRP 20 -3.644 29.340 9.334 1.00 6.94 ATOM 140 CA TRP 20 -2.442 29.264 10.113 1.00 6.94 ATOM 141 CB TRP 20 -1.433 28.193 9.679 1.00 6.94 ATOM 142 CG TRP 20 -1.704 26.900 10.430 1.00 6.94 ATOM 143 CD2 TRP 20 -2.890 26.098 10.311 1.00 6.94 ATOM 144 CD1 TRP 20 -0.952 26.318 11.410 1.00 6.94 ATOM 145 NE1 TRP 20 -1.574 25.186 11.877 1.00 6.94 ATOM 146 CE2 TRP 20 -2.775 25.046 11.219 1.00 6.94 ATOM 147 CE3 TRP 20 -3.998 26.240 9.528 1.00 6.94 ATOM 148 CZ2 TRP 20 -3.766 24.117 11.353 1.00 6.94 ATOM 149 CZ3 TRP 20 -4.987 25.290 9.646 1.00 6.94 ATOM 150 CH2 TRP 20 -4.873 24.248 10.542 1.00 6.94 ATOM 151 C TRP 20 -1.841 30.594 10.451 1.00 6.94 ATOM 152 O TRP 20 -1.231 30.734 11.506 1.00 6.94 ATOM 153 N ALA 21 -1.975 31.613 9.590 1.00 6.30 ATOM 154 CA ALA 21 -1.449 32.912 9.917 1.00 6.30 ATOM 155 CB ALA 21 -1.678 33.933 8.792 1.00 6.30 ATOM 156 C ALA 21 -2.172 33.419 11.129 1.00 6.30 ATOM 157 O ALA 21 -1.587 34.101 11.972 1.00 6.30 ATOM 158 N SER 22 -3.478 33.104 11.237 1.00 6.67 ATOM 159 CA SER 22 -4.286 33.590 12.318 1.00 6.67 ATOM 160 CB SER 22 -5.728 33.054 12.289 1.00 6.67 ATOM 161 OG SER 22 -6.463 33.583 13.381 1.00 6.67 ATOM 162 C SER 22 -3.693 33.141 13.612 1.00 6.67 ATOM 163 O SER 22 -3.665 33.898 14.580 1.00 6.67 ATOM 164 N LEU 23 -3.198 31.894 13.677 1.00 7.21 ATOM 165 CA LEU 23 -2.641 31.462 14.921 1.00 7.21 ATOM 166 CB LEU 23 -2.382 29.949 15.015 1.00 7.21 ATOM 167 CG LEU 23 -1.564 29.361 13.869 1.00 7.21 ATOM 168 CD1 LEU 23 -0.163 29.958 13.894 1.00 7.21 ATOM 169 CD2 LEU 23 -1.575 27.825 13.892 1.00 7.21 ATOM 170 C LEU 23 -1.428 32.300 15.210 1.00 7.21 ATOM 171 O LEU 23 -1.093 32.529 16.370 1.00 7.21 ATOM 172 N ALA 24 -0.721 32.762 14.160 1.00 6.92 ATOM 173 CA ALA 24 0.393 33.658 14.323 1.00 6.92 ATOM 174 CB ALA 24 0.993 34.068 12.970 1.00 6.92 ATOM 175 C ALA 24 -0.122 34.928 14.921 1.00 6.92 ATOM 176 O ALA 24 0.483 35.503 15.826 1.00 6.92 ATOM 177 N ALA 25 -1.267 35.403 14.397 1.00 6.70 ATOM 178 CA ALA 25 -1.863 36.624 14.847 1.00 6.70 ATOM 179 CB ALA 25 -3.120 37.004 14.048 1.00 6.70 ATOM 180 C ALA 25 -2.274 36.470 16.277 1.00 6.70 ATOM 181 O ALA 25 -2.133 37.397 17.072 1.00 6.70 ATOM 182 N ASN 26 -2.814 35.290 16.632 1.00 6.87 ATOM 183 CA ASN 26 -3.305 35.043 17.959 1.00 6.87 ATOM 184 CB ASN 26 -4.022 33.684 18.069 1.00 6.87 ATOM 185 CG ASN 26 -4.648 33.585 19.453 1.00 6.87 ATOM 186 OD1 ASN 26 -3.954 33.363 20.443 1.00 6.87 ATOM 187 ND2 ASN 26 -5.994 33.765 19.528 1.00 6.87 ATOM 188 C ASN 26 -2.177 35.075 18.950 1.00 6.87 ATOM 189 O ASN 26 -2.315 35.626 20.041 1.00 6.87 ATOM 190 N GLU 27 -1.021 34.489 18.585 1.00 6.50 ATOM 191 CA GLU 27 0.118 34.402 19.458 1.00 6.50 ATOM 192 CB GLU 27 1.296 33.679 18.778 1.00 6.50 ATOM 193 CG GLU 27 2.541 33.537 19.658 1.00 6.50 ATOM 194 CD GLU 27 3.601 32.807 18.842 1.00 6.50 ATOM 195 OE1 GLU 27 3.322 32.495 17.654 1.00 6.50 ATOM 196 OE2 GLU 27 4.698 32.541 19.402 1.00 6.50 ATOM 197 C GLU 27 0.582 35.786 19.795 1.00 6.50 ATOM 198 O GLU 27 0.956 36.065 20.933 1.00 6.50 ATOM 199 N LEU 28 0.578 36.677 18.787 1.00 7.48 ATOM 200 CA LEU 28 1.001 38.047 18.908 1.00 7.48 ATOM 201 CB LEU 28 1.095 38.728 17.520 1.00 7.48 ATOM 202 CG LEU 28 1.404 40.244 17.481 1.00 7.48 ATOM 203 CD1 LEU 28 1.779 40.678 16.053 1.00 7.48 ATOM 204 CD2 LEU 28 0.216 41.091 17.974 1.00 7.48 ATOM 205 C LEU 28 0.049 38.794 19.786 1.00 7.48 ATOM 206 O LEU 28 0.453 39.675 20.544 1.00 7.48 ATOM 207 N ARG 29 -1.250 38.469 19.688 1.00 8.17 ATOM 208 CA ARG 29 -2.270 39.135 20.447 1.00 8.17 ATOM 209 CB ARG 29 -3.682 38.644 20.091 1.00 8.17 ATOM 210 CG ARG 29 -4.064 38.942 18.640 1.00 8.17 ATOM 211 CD ARG 29 -5.427 38.383 18.228 1.00 8.17 ATOM 212 NE ARG 29 -5.649 38.764 16.804 1.00 8.17 ATOM 213 CZ ARG 29 -6.726 38.276 16.125 1.00 8.17 ATOM 214 NH1 ARG 29 -7.593 37.424 16.746 1.00 8.17 ATOM 215 NH2 ARG 29 -6.943 38.641 14.828 1.00 8.17 ATOM 216 C ARG 29 -2.027 38.869 21.906 1.00 8.17 ATOM 217 O ARG 29 -2.349 39.697 22.759 1.00 8.17 ATOM 218 N VAL 30 -1.434 37.699 22.209 1.00 7.90 ATOM 219 CA VAL 30 -1.111 37.213 23.524 1.00 7.90 ATOM 220 CB VAL 30 -0.436 35.868 23.503 1.00 7.90 ATOM 221 CG1 VAL 30 -0.042 35.474 24.940 1.00 7.90 ATOM 222 CG2 VAL 30 -1.380 34.863 22.820 1.00 7.90 ATOM 223 C VAL 30 -0.157 38.172 24.167 1.00 7.90 ATOM 224 O VAL 30 -0.043 38.179 25.390 1.00 7.90 ATOM 225 N THR 31 0.479 39.046 23.352 1.00 8.70 ATOM 226 CA THR 31 1.517 40.002 23.678 1.00 8.70 ATOM 227 CB THR 31 1.581 40.473 25.109 1.00 8.70 ATOM 228 OG1 THR 31 2.096 39.464 25.966 1.00 8.70 ATOM 229 CG2 THR 31 0.174 40.905 25.553 1.00 8.70 ATOM 230 C THR 31 2.890 39.473 23.370 1.00 8.70 ATOM 231 O THR 31 3.883 40.047 23.816 1.00 8.70 ATOM 232 N GLU 32 2.993 38.381 22.590 1.00 8.42 ATOM 233 CA GLU 32 4.270 37.941 22.089 1.00 8.42 ATOM 234 CB GLU 32 4.460 36.422 22.211 1.00 8.42 ATOM 235 CG GLU 32 5.781 35.904 21.642 1.00 8.42 ATOM 236 CD GLU 32 5.710 34.385 21.664 1.00 8.42 ATOM 237 OE1 GLU 32 4.711 33.851 22.218 1.00 8.42 ATOM 238 OE2 GLU 32 6.646 33.738 21.123 1.00 8.42 ATOM 239 C GLU 32 4.220 38.247 20.619 1.00 8.42 ATOM 240 O GLU 32 3.520 37.563 19.877 1.00 8.42 ATOM 241 N ARG 33 4.989 39.254 20.145 1.00 8.76 ATOM 242 CA ARG 33 4.830 39.708 18.785 1.00 8.76 ATOM 243 CB ARG 33 4.745 41.241 18.718 1.00 8.76 ATOM 244 CG ARG 33 3.786 41.857 19.738 1.00 8.76 ATOM 245 CD ARG 33 2.534 42.488 19.137 1.00 8.76 ATOM 246 NE ARG 33 1.780 43.108 20.262 1.00 8.76 ATOM 247 CZ ARG 33 0.837 44.061 20.010 1.00 8.76 ATOM 248 NH1 ARG 33 0.571 44.435 18.724 1.00 8.76 ATOM 249 NH2 ARG 33 0.159 44.639 21.042 1.00 8.76 ATOM 250 C ARG 33 6.040 39.360 17.967 1.00 8.76 ATOM 251 O ARG 33 7.116 39.922 18.166 1.00 8.76 ATOM 252 N PRO 34 5.890 38.463 17.030 1.00 8.33 ATOM 253 CA PRO 34 6.991 38.155 16.154 1.00 8.33 ATOM 254 CD PRO 34 5.060 37.295 17.279 1.00 8.33 ATOM 255 CB PRO 34 6.681 36.790 15.542 1.00 8.33 ATOM 256 CG PRO 34 5.781 36.119 16.595 1.00 8.33 ATOM 257 C PRO 34 7.139 39.236 15.134 1.00 8.33 ATOM 258 O PRO 34 6.151 39.882 14.785 1.00 8.33 ATOM 259 N PHE 35 8.369 39.425 14.633 1.00 7.69 ATOM 260 CA PHE 35 8.687 40.441 13.675 1.00 7.69 ATOM 261 CB PHE 35 10.198 40.453 13.386 1.00 7.69 ATOM 262 CG PHE 35 10.604 39.180 12.723 1.00 7.69 ATOM 263 CD1 PHE 35 10.896 38.055 13.459 1.00 7.69 ATOM 264 CD2 PHE 35 10.673 39.112 11.350 1.00 7.69 ATOM 265 CE1 PHE 35 11.261 36.887 12.834 1.00 7.69 ATOM 266 CE2 PHE 35 11.035 37.945 10.720 1.00 7.69 ATOM 267 CZ PHE 35 11.331 36.831 11.463 1.00 7.69 ATOM 268 C PHE 35 7.960 40.176 12.394 1.00 7.69 ATOM 269 O PHE 35 7.450 41.099 11.763 1.00 7.69 ATOM 270 N TRP 36 7.922 38.906 11.947 1.00 7.64 ATOM 271 CA TRP 36 7.248 38.595 10.724 1.00 7.64 ATOM 272 CB TRP 36 7.400 37.150 10.244 1.00 7.64 ATOM 273 CG TRP 36 6.606 36.955 8.976 1.00 7.64 ATOM 274 CD2 TRP 36 7.068 37.383 7.693 1.00 7.64 ATOM 275 CD1 TRP 36 5.354 36.450 8.789 1.00 7.64 ATOM 276 NE1 TRP 36 5.010 36.529 7.460 1.00 7.64 ATOM 277 CE2 TRP 36 6.056 37.105 6.773 1.00 7.64 ATOM 278 CE3 TRP 36 8.238 37.967 7.318 1.00 7.64 ATOM 279 CZ2 TRP 36 6.199 37.412 5.450 1.00 7.64 ATOM 280 CZ3 TRP 36 8.380 38.265 5.989 1.00 7.64 ATOM 281 CH2 TRP 36 7.387 37.996 5.069 1.00 7.64 ATOM 282 C TRP 36 5.786 38.795 10.908 1.00 7.64 ATOM 283 O TRP 36 5.099 39.305 10.024 1.00 7.64 ATOM 284 N ILE 37 5.272 38.365 12.070 1.00 7.51 ATOM 285 CA ILE 37 3.876 38.454 12.355 1.00 7.51 ATOM 286 CB ILE 37 3.527 37.839 13.676 1.00 7.51 ATOM 287 CG1 ILE 37 3.990 36.372 13.686 1.00 7.51 ATOM 288 CG2 ILE 37 2.018 38.018 13.911 1.00 7.51 ATOM 289 CD1 ILE 37 3.478 35.576 12.488 1.00 7.51 ATOM 290 C ILE 37 3.502 39.896 12.395 1.00 7.51 ATOM 291 O ILE 37 2.412 40.266 11.961 1.00 7.51 ATOM 292 N SER 38 4.389 40.747 12.946 1.00 7.75 ATOM 293 CA SER 38 4.094 42.146 13.033 1.00 7.75 ATOM 294 CB SER 38 5.159 42.971 13.780 1.00 7.75 ATOM 295 OG SER 38 6.360 43.058 13.029 1.00 7.75 ATOM 296 C SER 38 3.940 42.690 11.651 1.00 7.75 ATOM 297 O SER 38 3.041 43.485 11.403 1.00 7.75 ATOM 298 N SER 39 4.784 42.255 10.699 1.00 7.26 ATOM 299 CA SER 39 4.697 42.759 9.356 1.00 7.26 ATOM 300 CB SER 39 5.744 42.128 8.421 1.00 7.26 ATOM 301 OG SER 39 7.056 42.459 8.850 1.00 7.26 ATOM 302 C SER 39 3.349 42.390 8.813 1.00 7.26 ATOM 303 O SER 39 2.728 43.163 8.083 1.00 7.26 ATOM 304 N PHE 40 2.875 41.174 9.148 1.00 7.18 ATOM 305 CA PHE 40 1.593 40.706 8.703 1.00 7.18 ATOM 306 CB PHE 40 1.313 39.253 9.135 1.00 7.18 ATOM 307 CG PHE 40 0.039 38.810 8.494 1.00 7.18 ATOM 308 CD1 PHE 40 0.049 38.231 7.244 1.00 7.18 ATOM 309 CD2 PHE 40 -1.169 38.970 9.137 1.00 7.18 ATOM 310 CE1 PHE 40 -1.120 37.818 6.649 1.00 7.18 ATOM 311 CE2 PHE 40 -2.340 38.559 8.544 1.00 7.18 ATOM 312 CZ PHE 40 -2.320 37.984 7.297 1.00 7.18 ATOM 313 C PHE 40 0.541 41.565 9.332 1.00 7.18 ATOM 314 O PHE 40 -0.394 42.017 8.672 1.00 7.18 ATOM 315 N ILE 41 0.704 41.836 10.637 1.00 6.86 ATOM 316 CA ILE 41 -0.193 42.625 11.428 1.00 6.86 ATOM 317 CB ILE 41 0.277 42.788 12.844 1.00 6.86 ATOM 318 CG1 ILE 41 0.373 41.424 13.554 1.00 6.86 ATOM 319 CG2 ILE 41 -0.667 43.784 13.538 1.00 6.86 ATOM 320 CD1 ILE 41 -0.960 40.695 13.684 1.00 6.86 ATOM 321 C ILE 41 -0.236 43.993 10.824 1.00 6.86 ATOM 322 O ILE 41 -1.268 44.658 10.874 1.00 6.86 ATOM 323 N GLY 42 0.887 44.458 10.237 1.00 7.13 ATOM 324 CA GLY 42 0.899 45.776 9.663 1.00 7.13 ATOM 325 C GLY 42 1.876 46.654 10.392 1.00 7.13 ATOM 326 O GLY 42 1.884 47.870 10.207 1.00 7.13 ATOM 327 N ARG 43 2.720 46.048 11.249 1.00 7.02 ATOM 328 CA ARG 43 3.723 46.727 12.022 1.00 7.02 ATOM 329 CB ARG 43 4.250 45.877 13.189 1.00 7.02 ATOM 330 CG ARG 43 3.113 45.503 14.139 1.00 7.02 ATOM 331 CD ARG 43 2.255 46.716 14.505 1.00 7.02 ATOM 332 NE ARG 43 1.013 46.225 15.162 1.00 7.02 ATOM 333 CZ ARG 43 0.017 47.113 15.443 1.00 7.02 ATOM 334 NH1 ARG 43 0.188 48.436 15.152 1.00 7.02 ATOM 335 NH2 ARG 43 -1.144 46.682 16.017 1.00 7.02 ATOM 336 C ARG 43 4.866 47.118 11.140 1.00 7.02 ATOM 337 O ARG 43 5.125 46.494 10.111 1.00 7.02 ATOM 338 N SER 44 5.574 48.197 11.530 1.00 6.92 ATOM 339 CA SER 44 6.669 48.700 10.755 1.00 6.92 ATOM 340 CB SER 44 7.103 50.120 11.150 1.00 6.92 ATOM 341 OG SER 44 7.629 50.120 12.468 1.00 6.92 ATOM 342 C SER 44 7.851 47.803 10.928 1.00 6.92 ATOM 343 O SER 44 7.950 47.042 11.890 1.00 6.92 ATOM 344 N LYS 45 8.786 47.895 9.967 1.00 7.35 ATOM 345 CA LYS 45 9.974 47.095 9.924 1.00 7.35 ATOM 346 CB LYS 45 10.849 47.463 8.713 1.00 7.35 ATOM 347 CG LYS 45 11.316 48.922 8.748 1.00 7.35 ATOM 348 CD LYS 45 12.384 49.287 7.716 1.00 7.35 ATOM 349 CE LYS 45 12.823 50.753 7.789 1.00 7.35 ATOM 350 NZ LYS 45 11.679 51.647 7.493 1.00 7.35 ATOM 351 C LYS 45 10.781 47.368 11.146 1.00 7.35 ATOM 352 O LYS 45 11.283 46.441 11.775 1.00 7.35 TER END