####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS007_5-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS007_5-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 18 28 - 45 4.61 25.55 LCS_AVERAGE: 33.16 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 2 - 9 1.94 21.03 LONGEST_CONTINUOUS_SEGMENT: 8 15 - 22 1.91 21.48 LCS_AVERAGE: 14.88 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 5 2 - 6 0.91 34.02 LONGEST_CONTINUOUS_SEGMENT: 5 5 - 9 0.87 22.03 LONGEST_CONTINUOUS_SEGMENT: 5 17 - 21 0.81 21.76 LONGEST_CONTINUOUS_SEGMENT: 5 28 - 32 0.76 19.23 LONGEST_CONTINUOUS_SEGMENT: 5 33 - 37 0.89 31.65 LCS_AVERAGE: 9.81 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 5 8 11 3 3 5 5 7 8 8 9 9 9 9 10 11 12 13 14 17 18 19 22 LCS_GDT V 3 V 3 5 8 11 3 4 5 5 7 8 8 9 9 9 9 10 11 12 13 15 17 18 19 22 LCS_GDT Q 4 Q 4 5 8 11 3 4 5 6 7 8 8 9 9 10 10 12 14 15 17 20 21 22 24 24 LCS_GDT G 5 G 5 5 8 11 3 4 5 6 7 8 8 9 9 10 10 12 14 15 17 20 20 22 24 24 LCS_GDT P 6 P 6 5 8 11 3 4 5 6 7 8 8 9 9 10 10 12 14 15 17 20 21 22 24 24 LCS_GDT W 7 W 7 5 8 11 3 4 5 6 7 8 8 9 9 10 10 12 14 15 17 20 21 22 24 24 LCS_GDT V 8 V 8 5 8 11 3 4 5 6 7 8 8 9 9 10 10 12 14 15 17 20 21 22 24 24 LCS_GDT G 9 G 9 5 8 11 0 4 5 6 7 8 8 9 9 10 10 12 14 15 17 20 21 22 24 24 LCS_GDT S 10 S 10 3 3 12 1 3 3 3 6 8 8 9 9 10 11 12 14 15 17 20 21 22 24 24 LCS_GDT S 11 S 11 3 3 12 3 3 3 3 4 4 5 6 8 10 11 12 14 15 17 20 21 22 24 24 LCS_GDT Y 12 Y 12 3 3 12 3 3 3 3 3 4 4 5 7 8 11 12 12 14 17 20 21 22 24 24 LCS_GDT V 13 V 13 3 4 12 3 3 3 5 5 6 7 7 8 10 11 12 14 15 17 20 21 22 24 24 LCS_GDT A 14 A 14 3 4 12 3 3 3 5 5 6 7 7 8 10 11 12 12 14 17 20 21 22 24 24 LCS_GDT E 15 E 15 4 8 12 3 4 6 6 7 8 8 8 8 10 11 12 12 13 15 17 18 21 24 24 LCS_GDT T 16 T 16 4 8 12 3 4 6 6 7 8 8 8 8 10 11 12 12 13 16 20 21 22 24 24 LCS_GDT G 17 G 17 5 8 12 4 5 6 6 7 8 8 8 8 9 10 11 12 13 16 20 21 22 24 24 LCS_GDT Q 18 Q 18 5 8 12 4 5 6 6 7 8 8 8 8 9 9 11 12 15 17 19 21 22 24 25 LCS_GDT N 19 N 19 5 8 12 4 5 5 6 7 8 8 8 8 9 9 11 12 15 17 17 18 20 22 25 LCS_GDT W 20 W 20 5 8 12 4 5 6 6 7 8 8 8 9 9 9 11 12 13 17 17 19 23 23 25 LCS_GDT A 21 A 21 5 8 14 3 5 6 6 7 8 8 9 10 11 12 13 14 15 17 21 21 23 24 25 LCS_GDT S 22 S 22 4 8 14 3 5 5 5 7 8 8 9 10 11 12 13 14 16 20 21 21 23 24 25 LCS_GDT L 23 L 23 4 4 14 3 3 4 4 4 6 7 9 10 11 12 14 17 18 20 21 21 23 24 25 LCS_GDT A 24 A 24 4 5 14 3 4 5 5 5 6 7 9 10 11 12 13 14 16 20 21 21 23 24 25 LCS_GDT A 25 A 25 4 5 14 3 4 5 5 5 5 8 9 9 10 10 12 14 15 17 20 21 22 24 24 LCS_GDT N 26 N 26 4 5 14 3 4 5 5 6 8 8 9 9 11 12 13 14 15 17 19 20 21 23 24 LCS_GDT E 27 E 27 4 6 14 3 4 5 5 5 6 7 8 10 11 12 13 16 18 20 21 21 23 23 25 LCS_GDT L 28 L 28 5 7 18 3 5 5 5 7 7 7 9 10 11 12 14 17 18 20 21 21 23 24 25 LCS_GDT R 29 R 29 5 7 18 3 5 5 6 7 7 7 8 12 14 15 16 17 18 20 21 21 23 24 25 LCS_GDT V 30 V 30 5 7 18 3 5 5 6 7 7 7 8 11 14 15 16 17 18 20 21 21 23 24 25 LCS_GDT T 31 T 31 5 7 18 3 5 5 6 7 7 10 12 13 14 15 16 17 18 20 21 21 22 24 24 LCS_GDT E 32 E 32 5 7 18 3 5 5 6 7 7 10 12 13 14 15 16 17 18 20 21 21 23 23 25 LCS_GDT R 33 R 33 5 7 18 3 4 5 6 7 7 10 12 13 14 15 16 17 18 20 21 21 23 23 25 LCS_GDT P 34 P 34 5 7 18 4 4 5 6 7 7 9 10 13 14 15 16 17 18 20 21 21 23 23 25 LCS_GDT F 35 F 35 5 5 18 4 4 5 5 6 8 10 12 13 14 15 16 17 18 20 21 21 23 23 25 LCS_GDT W 36 W 36 5 5 18 4 4 5 5 7 8 9 12 13 14 15 16 17 18 20 21 21 23 23 25 LCS_GDT I 37 I 37 5 5 18 4 4 5 5 5 7 9 10 12 14 14 16 17 17 17 18 19 23 23 25 LCS_GDT S 38 S 38 3 5 18 3 5 5 6 7 8 10 12 13 14 15 16 17 18 20 21 21 23 23 25 LCS_GDT S 39 S 39 3 7 18 3 3 4 4 7 7 9 10 10 11 14 15 17 17 19 21 21 23 23 25 LCS_GDT F 40 F 40 3 7 18 3 3 4 6 7 8 10 12 13 14 15 16 17 18 20 21 21 23 23 25 LCS_GDT I 41 I 41 4 7 18 3 5 5 6 7 8 10 12 13 14 15 16 17 18 20 21 21 23 23 25 LCS_GDT G 42 G 42 4 7 18 3 5 5 6 7 8 9 12 13 14 15 16 17 18 20 21 21 23 23 25 LCS_GDT R 43 R 43 4 7 18 3 5 5 6 7 8 10 12 13 14 15 16 17 18 20 21 21 23 23 25 LCS_GDT S 44 S 44 4 7 18 3 5 5 6 7 8 10 12 13 14 15 16 17 18 20 21 21 23 23 25 LCS_GDT K 45 K 45 3 7 18 3 3 4 6 7 7 10 12 13 14 15 16 17 18 20 21 21 23 23 25 LCS_AVERAGE LCS_A: 19.28 ( 9.81 14.88 33.16 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 5 6 6 7 8 10 12 13 14 15 16 17 18 20 21 21 23 24 25 GDT PERCENT_AT 9.09 11.36 13.64 13.64 15.91 18.18 22.73 27.27 29.55 31.82 34.09 36.36 38.64 40.91 45.45 47.73 47.73 52.27 54.55 56.82 GDT RMS_LOCAL 0.25 0.59 0.96 0.96 1.39 1.91 2.85 3.01 3.20 3.38 3.61 3.79 4.06 5.08 5.74 6.13 5.84 6.69 7.01 7.50 GDT RMS_ALL_AT 22.40 22.51 20.48 20.48 20.82 21.48 26.14 26.08 26.14 26.37 25.78 25.97 26.12 24.06 23.16 22.58 23.27 22.37 16.45 21.42 # Checking swapping # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 37.445 0 0.053 0.061 38.177 0.000 0.000 - LGA V 3 V 3 39.679 0 0.100 1.079 42.489 0.000 0.000 42.489 LGA Q 4 Q 4 43.479 0 0.079 1.209 46.060 0.000 0.000 45.503 LGA G 5 G 5 49.310 0 0.037 0.037 50.092 0.000 0.000 - LGA P 6 P 6 52.185 0 0.103 0.093 56.652 0.000 0.000 56.652 LGA W 7 W 7 51.825 0 0.305 1.401 60.427 0.000 0.000 60.427 LGA V 8 V 8 44.742 0 0.675 0.679 47.386 0.000 0.000 40.297 LGA G 9 G 9 43.911 0 0.543 0.543 44.414 0.000 0.000 - LGA S 10 S 10 42.140 0 0.679 0.707 43.146 0.000 0.000 42.469 LGA S 11 S 11 40.113 0 0.615 0.967 40.624 0.000 0.000 39.985 LGA Y 12 Y 12 35.511 0 0.654 1.365 37.625 0.000 0.000 31.766 LGA V 13 V 13 35.461 0 0.599 1.462 36.878 0.000 0.000 36.878 LGA A 14 A 14 37.210 0 0.634 0.614 39.056 0.000 0.000 - LGA E 15 E 15 31.246 0 0.641 1.297 33.397 0.000 0.000 28.785 LGA T 16 T 16 27.476 0 0.729 1.396 28.513 0.000 0.000 27.193 LGA G 17 G 17 27.087 0 0.661 0.661 27.715 0.000 0.000 - LGA Q 18 Q 18 22.616 0 0.108 1.036 23.501 0.000 0.000 21.073 LGA N 19 N 19 21.946 0 0.069 1.127 27.665 0.000 0.000 25.725 LGA W 20 W 20 19.121 0 0.057 1.274 25.341 0.000 0.000 25.341 LGA A 21 A 21 17.677 0 0.638 0.610 18.243 0.000 0.000 - LGA S 22 S 22 15.823 0 0.616 0.688 18.930 0.000 0.000 18.930 LGA L 23 L 23 13.510 0 0.067 1.013 14.366 0.000 0.000 13.762 LGA A 24 A 24 16.337 0 0.615 0.583 17.243 0.000 0.000 - LGA A 25 A 25 17.949 0 0.033 0.044 19.593 0.000 0.000 - LGA N 26 N 26 16.331 0 0.097 0.597 19.596 0.000 0.000 19.596 LGA E 27 E 27 13.151 0 0.688 1.398 14.440 0.000 0.000 9.601 LGA L 28 L 28 10.686 0 0.565 0.505 15.302 0.000 0.000 15.302 LGA R 29 R 29 5.902 0 0.479 1.146 14.403 0.000 0.000 14.403 LGA V 30 V 30 6.098 0 0.178 1.251 9.675 0.909 0.519 9.675 LGA T 31 T 31 2.899 0 0.712 1.447 4.861 15.455 18.961 4.861 LGA E 32 E 32 3.700 0 0.128 1.484 4.606 18.636 29.899 1.210 LGA R 33 R 33 4.109 0 0.044 1.394 12.628 4.091 1.488 12.628 LGA P 34 P 34 5.168 0 0.042 0.288 6.538 9.545 5.455 6.531 LGA F 35 F 35 3.310 0 0.044 1.196 10.124 20.909 7.603 10.124 LGA W 36 W 36 3.578 0 0.583 1.314 8.269 8.636 2.468 7.167 LGA I 37 I 37 5.356 0 0.420 0.502 10.775 2.727 1.364 10.775 LGA S 38 S 38 1.649 0 0.650 0.704 5.120 25.000 29.697 1.951 LGA S 39 S 39 7.017 0 0.233 0.734 10.299 0.455 0.303 10.299 LGA F 40 F 40 3.222 0 0.665 1.421 11.757 21.364 8.760 11.757 LGA I 41 I 41 2.693 0 0.156 1.307 7.433 43.636 21.818 7.433 LGA G 42 G 42 3.311 0 0.492 0.492 4.722 12.273 12.273 - LGA R 43 R 43 2.420 0 0.208 1.377 7.159 44.545 26.281 7.070 LGA S 44 S 44 2.433 0 0.285 0.731 4.063 45.455 35.758 4.063 LGA K 45 K 45 1.643 0 0.589 1.016 4.100 45.455 28.889 4.100 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 13.991 13.768 14.607 7.252 5.262 3.688 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 12 3.01 25.000 22.349 0.386 LGA_LOCAL RMSD: 3.007 Number of atoms: 12 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 26.078 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 13.991 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.581499 * X + -0.718614 * Y + 0.381383 * Z + 38.203098 Y_new = 0.188983 * X + -0.336650 * Y + -0.922471 * Z + 70.090309 Z_new = 0.791293 * X + 0.608491 * Y + -0.059956 * Z + 43.538593 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.314226 -0.912920 1.669011 [DEG: 18.0038 -52.3065 95.6273 ] ZXZ: 0.392036 1.630788 0.915256 [DEG: 22.4620 93.4373 52.4403 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS007_5-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS007_5-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 12 3.01 22.349 13.99 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS007_5-D1 PFRMAT TS TARGET T0953s2 MODEL 5 PARENT 5j7c_D ATOM 9 N ALA 2 7.265 54.169 44.881 1.00180.42 ATOM 10 CA ALA 2 6.272 54.416 45.878 1.00180.42 ATOM 11 CB ALA 2 5.575 55.780 45.737 1.00180.42 ATOM 12 C ALA 2 5.241 53.355 45.697 1.00180.42 ATOM 13 O ALA 2 5.068 52.833 44.597 1.00180.42 ATOM 14 N VAL 3 4.539 52.989 46.783 1.00125.14 ATOM 15 CA VAL 3 3.567 51.947 46.651 1.00125.14 ATOM 16 CB VAL 3 3.909 50.717 47.439 1.00125.14 ATOM 17 CG1 VAL 3 3.948 51.088 48.930 1.00125.14 ATOM 18 CG2 VAL 3 2.893 49.617 47.094 1.00125.14 ATOM 19 C VAL 3 2.254 52.455 47.148 1.00125.14 ATOM 20 O VAL 3 2.193 53.363 47.976 1.00125.14 ATOM 21 N GLN 4 1.160 51.873 46.617 1.00206.52 ATOM 22 CA GLN 4 -0.176 52.230 46.998 1.00206.52 ATOM 23 CB GLN 4 -1.249 51.805 45.980 1.00206.52 ATOM 24 CG GLN 4 -1.358 52.715 44.756 1.00206.52 ATOM 25 CD GLN 4 -2.341 53.824 45.110 1.00206.52 ATOM 26 OE1 GLN 4 -1.949 54.921 45.508 1.00206.52 ATOM 27 NE2 GLN 4 -3.660 53.526 44.970 1.00206.52 ATOM 28 C GLN 4 -0.494 51.541 48.280 1.00206.52 ATOM 29 O GLN 4 0.206 50.624 48.703 1.00206.52 ATOM 30 N GLY 5 -1.568 52.003 48.946 1.00 87.67 ATOM 31 CA GLY 5 -1.966 51.416 50.189 1.00 87.67 ATOM 32 C GLY 5 -2.727 50.173 49.877 1.00 87.67 ATOM 33 O GLY 5 -3.003 49.849 48.722 1.00 87.67 ATOM 34 N PRO 6 -3.077 49.484 50.923 1.00149.09 ATOM 35 CA PRO 6 -3.777 48.239 50.805 1.00149.09 ATOM 36 CD PRO 6 -3.306 50.120 52.211 1.00149.09 ATOM 37 CB PRO 6 -4.151 47.850 52.232 1.00149.09 ATOM 38 CG PRO 6 -4.319 49.212 52.930 1.00149.09 ATOM 39 C PRO 6 -4.999 48.455 49.978 1.00149.09 ATOM 40 O PRO 6 -5.414 47.531 49.280 1.00149.09 ATOM 41 N TRP 7 -5.592 49.660 50.036 1.00224.72 ATOM 42 CA TRP 7 -6.787 49.868 49.282 1.00224.72 ATOM 43 CB TRP 7 -7.704 50.948 49.881 1.00224.72 ATOM 44 CG TRP 7 -9.014 51.118 49.152 1.00224.72 ATOM 45 CD2 TRP 7 -10.059 52.007 49.577 1.00224.72 ATOM 46 CD1 TRP 7 -9.468 50.496 48.026 1.00224.72 ATOM 47 NE1 TRP 7 -10.732 50.942 47.723 1.00224.72 ATOM 48 CE2 TRP 7 -11.109 51.871 48.670 1.00224.72 ATOM 49 CE3 TRP 7 -10.138 52.863 50.638 1.00224.72 ATOM 50 CZ2 TRP 7 -12.259 52.593 48.812 1.00224.72 ATOM 51 CZ3 TRP 7 -11.298 53.590 50.776 1.00224.72 ATOM 52 CH2 TRP 7 -12.340 53.458 49.881 1.00224.72 ATOM 53 C TRP 7 -6.383 50.309 47.916 1.00224.72 ATOM 54 O TRP 7 -5.732 51.339 47.746 1.00224.72 ATOM 55 N VAL 8 -6.761 49.515 46.898 1.00 51.17 ATOM 56 CA VAL 8 -6.431 49.841 45.544 1.00 51.17 ATOM 57 CB VAL 8 -5.477 48.868 44.912 1.00 51.17 ATOM 58 CG1 VAL 8 -5.259 49.261 43.441 1.00 51.17 ATOM 59 CG2 VAL 8 -4.184 48.842 45.744 1.00 51.17 ATOM 60 C VAL 8 -7.707 49.767 44.778 1.00 51.17 ATOM 61 O VAL 8 -8.645 49.081 45.185 1.00 51.17 ATOM 62 N GLY 9 -7.788 50.498 43.653 1.00104.20 ATOM 63 CA GLY 9 -8.982 50.448 42.869 1.00104.20 ATOM 64 C GLY 9 -8.576 50.595 41.443 1.00104.20 ATOM 65 O GLY 9 -7.537 51.177 41.135 1.00104.20 ATOM 66 N SER 10 -9.400 50.058 40.526 1.00152.30 ATOM 67 CA SER 10 -9.090 50.177 39.136 1.00152.30 ATOM 68 CB SER 10 -8.942 48.824 38.414 1.00152.30 ATOM 69 OG SER 10 -7.839 48.101 38.940 1.00152.30 ATOM 70 C SER 10 -10.246 50.876 38.513 1.00152.30 ATOM 71 O SER 10 -11.391 50.685 38.917 1.00152.30 ATOM 72 N SER 11 -9.966 51.734 37.517 1.00166.45 ATOM 73 CA SER 11 -11.037 52.419 36.865 1.00166.45 ATOM 74 CB SER 11 -10.588 53.649 36.058 1.00166.45 ATOM 75 OG SER 11 -10.040 54.633 36.922 1.00166.45 ATOM 76 C SER 11 -11.640 51.451 35.908 1.00166.45 ATOM 77 O SER 11 -11.023 50.449 35.550 1.00166.45 ATOM 78 N TYR 12 -12.889 51.716 35.488 1.00239.42 ATOM 79 CA TYR 12 -13.502 50.852 34.528 1.00239.42 ATOM 80 CB TYR 12 -14.901 50.368 34.950 1.00239.42 ATOM 81 CG TYR 12 -15.415 49.440 33.904 1.00239.42 ATOM 82 CD1 TYR 12 -15.002 48.127 33.878 1.00239.42 ATOM 83 CD2 TYR 12 -16.313 49.875 32.958 1.00239.42 ATOM 84 CE1 TYR 12 -15.473 47.261 32.919 1.00239.42 ATOM 85 CE2 TYR 12 -16.788 49.013 31.997 1.00239.42 ATOM 86 CZ TYR 12 -16.366 47.706 31.974 1.00239.42 ATOM 87 OH TYR 12 -16.852 46.821 30.987 1.00239.42 ATOM 88 C TYR 12 -13.648 51.692 33.308 1.00239.42 ATOM 89 O TYR 12 -14.268 52.754 33.340 1.00239.42 ATOM 90 N VAL 13 -13.058 51.238 32.190 1.00105.79 ATOM 91 CA VAL 13 -13.100 52.036 31.006 1.00105.79 ATOM 92 CB VAL 13 -11.805 52.045 30.250 1.00105.79 ATOM 93 CG1 VAL 13 -10.723 52.669 31.147 1.00105.79 ATOM 94 CG2 VAL 13 -11.491 50.606 29.804 1.00105.79 ATOM 95 C VAL 13 -14.137 51.462 30.105 1.00105.79 ATOM 96 O VAL 13 -14.401 50.261 30.124 1.00105.79 ATOM 97 N ALA 14 -14.778 52.333 29.304 1.00 18.66 ATOM 98 CA ALA 14 -15.767 51.861 28.388 1.00 18.66 ATOM 99 CB ALA 14 -16.519 52.983 27.652 1.00 18.66 ATOM 100 C ALA 14 -15.034 51.056 27.372 1.00 18.66 ATOM 101 O ALA 14 -13.853 51.288 27.122 1.00 18.66 ATOM 102 N GLU 15 -15.717 50.064 26.774 1.00 66.05 ATOM 103 CA GLU 15 -15.041 49.237 25.822 1.00 66.05 ATOM 104 CB GLU 15 -15.883 48.053 25.320 1.00 66.05 ATOM 105 CG GLU 15 -16.253 47.046 26.410 1.00 66.05 ATOM 106 CD GLU 15 -14.983 46.362 26.900 1.00 66.05 ATOM 107 OE1 GLU 15 -13.872 46.850 26.563 1.00 66.05 ATOM 108 OE2 GLU 15 -15.113 45.340 27.624 1.00 66.05 ATOM 109 C GLU 15 -14.706 50.083 24.644 1.00 66.05 ATOM 110 O GLU 15 -15.511 50.887 24.175 1.00 66.05 ATOM 111 N THR 16 -13.471 49.928 24.142 1.00109.16 ATOM 112 CA THR 16 -13.064 50.671 22.993 1.00109.16 ATOM 113 CB THR 16 -12.067 51.750 23.307 1.00109.16 ATOM 114 OG1 THR 16 -11.806 52.536 22.153 1.00109.16 ATOM 115 CG2 THR 16 -10.772 51.095 23.814 1.00109.16 ATOM 116 C THR 16 -12.405 49.688 22.093 1.00109.16 ATOM 117 O THR 16 -11.945 48.641 22.542 1.00109.16 ATOM 118 N GLY 17 -12.362 49.987 20.782 1.00 23.58 ATOM 119 CA GLY 17 -11.721 49.061 19.896 1.00 23.58 ATOM 120 C GLY 17 -10.275 49.081 20.252 1.00 23.58 ATOM 121 O GLY 17 -9.723 50.134 20.572 1.00 23.58 ATOM 122 N GLN 18 -9.615 47.908 20.209 1.00 46.81 ATOM 123 CA GLN 18 -8.230 47.902 20.571 1.00 46.81 ATOM 124 CB GLN 18 -7.952 47.085 21.846 1.00 46.81 ATOM 125 CG GLN 18 -8.623 47.689 23.084 1.00 46.81 ATOM 126 CD GLN 18 -8.410 46.756 24.269 1.00 46.81 ATOM 127 OE1 GLN 18 -8.540 45.540 24.148 1.00 46.81 ATOM 128 NE2 GLN 18 -8.078 47.339 25.453 1.00 46.81 ATOM 129 C GLN 18 -7.455 47.295 19.450 1.00 46.81 ATOM 130 O GLN 18 -7.570 46.104 19.167 1.00 46.81 ATOM 131 N ASN 19 -6.634 48.123 18.779 1.00 48.05 ATOM 132 CA ASN 19 -5.819 47.653 17.700 1.00 48.05 ATOM 133 CB ASN 19 -5.070 48.788 16.982 1.00 48.05 ATOM 134 CG ASN 19 -6.097 49.621 16.222 1.00 48.05 ATOM 135 OD1 ASN 19 -6.761 49.136 15.307 1.00 48.05 ATOM 136 ND2 ASN 19 -6.236 50.914 16.619 1.00 48.05 ATOM 137 C ASN 19 -4.813 46.722 18.286 1.00 48.05 ATOM 138 O ASN 19 -4.449 45.716 17.679 1.00 48.05 ATOM 139 N TRP 20 -4.305 47.060 19.487 1.00136.05 ATOM 140 CA TRP 20 -3.376 46.176 20.114 1.00136.05 ATOM 141 CB TRP 20 -1.925 46.654 20.032 1.00136.05 ATOM 142 CG TRP 20 -0.959 45.610 20.515 1.00136.05 ATOM 143 CD2 TRP 20 0.461 45.750 20.451 1.00136.05 ATOM 144 CD1 TRP 20 -1.205 44.384 21.051 1.00136.05 ATOM 145 NE1 TRP 20 -0.021 43.750 21.326 1.00136.05 ATOM 146 CE2 TRP 20 1.013 44.576 20.961 1.00136.05 ATOM 147 CE3 TRP 20 1.238 46.769 19.998 1.00136.05 ATOM 148 CZ2 TRP 20 2.363 44.399 21.027 1.00136.05 ATOM 149 CZ3 TRP 20 2.594 46.588 20.076 1.00136.05 ATOM 150 CH2 TRP 20 3.148 45.431 20.576 1.00136.05 ATOM 151 C TRP 20 -3.749 46.108 21.558 1.00136.05 ATOM 152 O TRP 20 -4.028 47.129 22.185 1.00136.05 ATOM 153 N ALA 21 -3.764 44.888 22.129 1.00 44.62 ATOM 154 CA ALA 21 -4.139 44.749 23.504 1.00 44.62 ATOM 155 CB ALA 21 -5.659 44.633 23.715 1.00 44.62 ATOM 156 C ALA 21 -3.517 43.497 24.032 1.00 44.62 ATOM 157 O ALA 21 -3.028 42.661 23.273 1.00 44.62 ATOM 158 N SER 22 -3.509 43.356 25.374 1.00 56.90 ATOM 159 CA SER 22 -2.935 42.187 25.979 1.00 56.90 ATOM 160 CB SER 22 -2.021 42.503 27.175 1.00 56.90 ATOM 161 OG SER 22 -0.899 43.262 26.747 1.00 56.90 ATOM 162 C SER 22 -4.048 41.328 26.493 1.00 56.90 ATOM 163 O SER 22 -4.873 41.774 27.291 1.00 56.90 ATOM 164 N LEU 23 -4.131 40.084 25.976 1.00 97.13 ATOM 165 CA LEU 23 -5.095 39.113 26.411 1.00 97.13 ATOM 166 CB LEU 23 -5.201 37.907 25.462 1.00 97.13 ATOM 167 CG LEU 23 -5.738 38.271 24.067 1.00 97.13 ATOM 168 CD1 LEU 23 -7.183 38.791 24.142 1.00 97.13 ATOM 169 CD2 LEU 23 -4.785 39.226 23.331 1.00 97.13 ATOM 170 C LEU 23 -4.749 38.574 27.772 1.00 97.13 ATOM 171 O LEU 23 -5.616 38.482 28.640 1.00 97.13 ATOM 172 N ALA 24 -3.464 38.211 28.004 1.00 59.28 ATOM 173 CA ALA 24 -3.117 37.585 29.254 1.00 59.28 ATOM 174 CB ALA 24 -2.408 36.230 29.082 1.00 59.28 ATOM 175 C ALA 24 -2.197 38.480 30.023 1.00 59.28 ATOM 176 O ALA 24 -1.185 38.952 29.508 1.00 59.28 ATOM 177 N ALA 25 -2.577 38.741 31.291 1.00134.95 ATOM 178 CA ALA 25 -1.909 39.628 32.205 1.00134.95 ATOM 179 CB ALA 25 -2.766 39.937 33.444 1.00134.95 ATOM 180 C ALA 25 -0.571 39.170 32.727 1.00134.95 ATOM 181 O ALA 25 0.377 39.952 32.742 1.00134.95 ATOM 182 N ASN 26 -0.436 37.899 33.162 1.00116.90 ATOM 183 CA ASN 26 0.766 37.523 33.870 1.00116.90 ATOM 184 CB ASN 26 0.751 36.057 34.332 1.00116.90 ATOM 185 CG ASN 26 -0.225 35.962 35.495 1.00116.90 ATOM 186 OD1 ASN 26 0.137 36.205 36.646 1.00116.90 ATOM 187 ND2 ASN 26 -1.503 35.615 35.191 1.00116.90 ATOM 188 C ASN 26 1.972 37.717 33.013 1.00116.90 ATOM 189 O ASN 26 2.894 38.448 33.373 1.00116.90 ATOM 190 N GLU 27 1.973 37.076 31.838 1.00129.92 ATOM 191 CA GLU 27 3.023 37.200 30.878 1.00129.92 ATOM 192 CB GLU 27 3.447 35.869 30.232 1.00129.92 ATOM 193 CG GLU 27 2.317 35.161 29.482 1.00129.92 ATOM 194 CD GLU 27 2.875 33.880 28.876 1.00129.92 ATOM 195 OE1 GLU 27 4.066 33.563 29.140 1.00129.92 ATOM 196 OE2 GLU 27 2.113 33.198 28.139 1.00129.92 ATOM 197 C GLU 27 2.381 38.027 29.833 1.00129.92 ATOM 198 O GLU 27 1.263 38.495 30.033 1.00129.92 ATOM 199 N LEU 28 3.057 38.287 28.706 1.00 74.99 ATOM 200 CA LEU 28 2.323 39.093 27.788 1.00 74.99 ATOM 201 CB LEU 28 3.128 40.254 27.182 1.00 74.99 ATOM 202 CG LEU 28 3.488 41.335 28.220 1.00 74.99 ATOM 203 CD1 LEU 28 4.177 42.540 27.559 1.00 74.99 ATOM 204 CD2 LEU 28 2.260 41.734 29.055 1.00 74.99 ATOM 205 C LEU 28 1.798 38.243 26.683 1.00 74.99 ATOM 206 O LEU 28 2.532 37.518 26.015 1.00 74.99 ATOM 207 N ARG 29 0.468 38.299 26.509 1.00133.98 ATOM 208 CA ARG 29 -0.220 37.636 25.448 1.00133.98 ATOM 209 CB ARG 29 -1.318 36.692 25.976 1.00133.98 ATOM 210 CG ARG 29 -2.301 36.194 24.920 1.00133.98 ATOM 211 CD ARG 29 -3.049 34.917 25.318 1.00133.98 ATOM 212 NE ARG 29 -3.994 35.234 26.426 1.00133.98 ATOM 213 CZ ARG 29 -4.995 34.351 26.714 1.00133.98 ATOM 214 NH1 ARG 29 -5.125 33.214 25.970 1.00133.98 ATOM 215 NH2 ARG 29 -5.867 34.601 27.735 1.00133.98 ATOM 216 C ARG 29 -0.863 38.755 24.707 1.00133.98 ATOM 217 O ARG 29 -1.686 39.470 25.271 1.00133.98 ATOM 218 N VAL 30 -0.509 38.972 23.426 1.00129.59 ATOM 219 CA VAL 30 -1.134 40.121 22.845 1.00129.59 ATOM 220 CB VAL 30 -0.212 41.250 22.520 1.00129.59 ATOM 221 CG1 VAL 30 0.565 41.641 23.790 1.00129.59 ATOM 222 CG2 VAL 30 0.605 40.884 21.269 1.00129.59 ATOM 223 C VAL 30 -1.776 39.748 21.558 1.00129.59 ATOM 224 O VAL 30 -1.426 38.754 20.923 1.00129.59 ATOM 225 N THR 31 -2.779 40.557 21.171 1.00113.81 ATOM 226 CA THR 31 -3.445 40.395 19.917 1.00113.81 ATOM 227 CB THR 31 -4.882 39.980 20.051 1.00113.81 ATOM 228 OG1 THR 31 -5.416 39.646 18.778 1.00113.81 ATOM 229 CG2 THR 31 -5.678 41.139 20.675 1.00113.81 ATOM 230 C THR 31 -3.419 41.739 19.264 1.00113.81 ATOM 231 O THR 31 -3.530 42.763 19.938 1.00113.81 ATOM 232 N GLU 32 -3.251 41.776 17.929 1.00136.85 ATOM 233 CA GLU 32 -3.192 43.058 17.289 1.00136.85 ATOM 234 CB GLU 32 -1.754 43.485 16.924 1.00136.85 ATOM 235 CG GLU 32 -1.515 45.003 16.951 1.00136.85 ATOM 236 CD GLU 32 -1.914 45.637 15.629 1.00136.85 ATOM 237 OE1 GLU 32 -1.275 45.301 14.597 1.00136.85 ATOM 238 OE2 GLU 32 -2.858 46.472 15.637 1.00136.85 ATOM 239 C GLU 32 -4.001 42.970 16.034 1.00136.85 ATOM 240 O GLU 32 -4.404 41.885 15.620 1.00136.85 ATOM 241 N ARG 33 -4.286 44.131 15.415 1.00 83.09 ATOM 242 CA ARG 33 -5.064 44.207 14.212 1.00 83.09 ATOM 243 CB ARG 33 -5.730 45.578 14.043 1.00 83.09 ATOM 244 CG ARG 33 -6.556 45.731 12.769 1.00 83.09 ATOM 245 CD ARG 33 -7.142 47.135 12.622 1.00 83.09 ATOM 246 NE ARG 33 -7.756 47.237 11.268 1.00 83.09 ATOM 247 CZ ARG 33 -8.046 48.468 10.753 1.00 83.09 ATOM 248 NH1 ARG 33 -7.767 49.591 11.476 1.00 83.09 ATOM 249 NH2 ARG 33 -8.614 48.577 9.517 1.00 83.09 ATOM 250 C ARG 33 -4.166 43.981 13.031 1.00 83.09 ATOM 251 O ARG 33 -3.058 44.507 12.934 1.00 83.09 ATOM 252 N PRO 34 -4.651 43.158 12.145 1.00 87.00 ATOM 253 CA PRO 34 -3.931 42.834 10.940 1.00 87.00 ATOM 254 CD PRO 34 -5.490 42.055 12.581 1.00 87.00 ATOM 255 CB PRO 34 -4.378 41.427 10.536 1.00 87.00 ATOM 256 CG PRO 34 -5.676 41.195 11.325 1.00 87.00 ATOM 257 C PRO 34 -4.168 43.835 9.854 1.00 87.00 ATOM 258 O PRO 34 -5.082 44.650 9.972 1.00 87.00 ATOM 259 N PHE 35 -3.342 43.794 8.789 1.00 69.19 ATOM 260 CA PHE 35 -3.547 44.659 7.665 1.00 69.19 ATOM 261 CB PHE 35 -2.486 45.762 7.537 1.00 69.19 ATOM 262 CG PHE 35 -2.701 46.636 8.724 1.00 69.19 ATOM 263 CD1 PHE 35 -3.736 47.542 8.739 1.00 69.19 ATOM 264 CD2 PHE 35 -1.877 46.546 9.822 1.00 69.19 ATOM 265 CE1 PHE 35 -3.944 48.350 9.832 1.00 69.19 ATOM 266 CE2 PHE 35 -2.080 47.352 10.918 1.00 69.19 ATOM 267 CZ PHE 35 -3.118 48.254 10.925 1.00 69.19 ATOM 268 C PHE 35 -3.523 43.800 6.440 1.00 69.19 ATOM 269 O PHE 35 -2.888 42.747 6.418 1.00 69.19 ATOM 270 N TRP 36 -4.216 44.243 5.376 1.00133.14 ATOM 271 CA TRP 36 -4.387 43.435 4.203 1.00133.14 ATOM 272 CB TRP 36 -5.232 44.123 3.117 1.00133.14 ATOM 273 CG TRP 36 -5.326 43.330 1.834 1.00133.14 ATOM 274 CD2 TRP 36 -6.258 42.262 1.610 1.00133.14 ATOM 275 CD1 TRP 36 -4.578 43.437 0.699 1.00133.14 ATOM 276 NE1 TRP 36 -4.985 42.501 -0.222 1.00133.14 ATOM 277 CE2 TRP 36 -6.017 41.769 0.327 1.00133.14 ATOM 278 CE3 TRP 36 -7.230 41.731 2.408 1.00133.14 ATOM 279 CZ2 TRP 36 -6.751 40.734 -0.178 1.00133.14 ATOM 280 CZ3 TRP 36 -7.970 40.690 1.893 1.00133.14 ATOM 281 CH2 TRP 36 -7.734 40.201 0.626 1.00133.14 ATOM 282 C TRP 36 -3.084 43.066 3.572 1.00133.14 ATOM 283 O TRP 36 -2.833 41.885 3.338 1.00133.14 ATOM 284 N ILE 37 -2.202 44.036 3.270 1.00223.80 ATOM 285 CA ILE 37 -1.028 43.579 2.590 1.00223.80 ATOM 286 CB ILE 37 -0.669 44.410 1.388 1.00223.80 ATOM 287 CG1 ILE 37 0.546 43.802 0.667 1.00223.80 ATOM 288 CG2 ILE 37 -0.498 45.877 1.816 1.00223.80 ATOM 289 CD1 ILE 37 0.817 44.418 -0.705 1.00223.80 ATOM 290 C ILE 37 0.138 43.564 3.523 1.00223.80 ATOM 291 O ILE 37 1.126 44.265 3.318 1.00223.80 ATOM 292 N SER 38 0.087 42.707 4.555 1.00131.40 ATOM 293 CA SER 38 1.221 42.614 5.421 1.00131.40 ATOM 294 CB SER 38 0.878 42.779 6.911 1.00131.40 ATOM 295 OG SER 38 0.312 44.059 7.145 1.00131.40 ATOM 296 C SER 38 1.738 41.228 5.239 1.00131.40 ATOM 297 O SER 38 1.035 40.254 5.499 1.00131.40 ATOM 298 N SER 39 2.976 41.104 4.736 1.00 46.03 ATOM 299 CA SER 39 3.556 39.809 4.555 1.00 46.03 ATOM 300 CB SER 39 4.902 39.868 3.818 1.00 46.03 ATOM 301 OG SER 39 4.721 40.417 2.520 1.00 46.03 ATOM 302 C SER 39 3.795 39.232 5.910 1.00 46.03 ATOM 303 O SER 39 3.373 38.118 6.212 1.00 46.03 ATOM 304 N PHE 40 4.478 40.011 6.768 1.00 67.67 ATOM 305 CA PHE 40 4.797 39.599 8.100 1.00 67.67 ATOM 306 CB PHE 40 6.171 38.914 8.207 1.00 67.67 ATOM 307 CG PHE 40 7.161 39.816 7.553 1.00 67.67 ATOM 308 CD1 PHE 40 7.779 40.832 8.245 1.00 67.67 ATOM 309 CD2 PHE 40 7.467 39.638 6.223 1.00 67.67 ATOM 310 CE1 PHE 40 8.688 41.649 7.614 1.00 67.67 ATOM 311 CE2 PHE 40 8.373 40.454 5.589 1.00 67.67 ATOM 312 CZ PHE 40 8.988 41.465 6.286 1.00 67.67 ATOM 313 C PHE 40 4.810 40.832 8.932 1.00 67.67 ATOM 314 O PHE 40 4.806 41.946 8.413 1.00 67.67 ATOM 315 N ILE 41 4.795 40.660 10.264 1.00160.72 ATOM 316 CA ILE 41 4.749 41.810 11.107 1.00160.72 ATOM 317 CB ILE 41 3.380 42.073 11.664 1.00160.72 ATOM 318 CG1 ILE 41 2.923 40.906 12.555 1.00160.72 ATOM 319 CG2 ILE 41 2.438 42.358 10.479 1.00160.72 ATOM 320 CD1 ILE 41 2.720 39.575 11.830 1.00160.72 ATOM 321 C ILE 41 5.685 41.597 12.246 1.00160.72 ATOM 322 O ILE 41 6.059 40.467 12.556 1.00160.72 ATOM 323 N GLY 42 6.118 42.705 12.879 1.00 84.30 ATOM 324 CA GLY 42 6.955 42.551 14.025 1.00 84.30 ATOM 325 C GLY 42 6.032 42.082 15.093 1.00 84.30 ATOM 326 O GLY 42 5.446 42.876 15.832 1.00 84.30 ATOM 327 N ARG 43 5.896 40.746 15.155 1.00260.75 ATOM 328 CA ARG 43 5.091 39.997 16.072 1.00260.75 ATOM 329 CB ARG 43 3.671 39.670 15.585 1.00260.75 ATOM 330 CG ARG 43 2.729 40.865 15.488 1.00260.75 ATOM 331 CD ARG 43 1.329 40.478 15.009 1.00260.75 ATOM 332 NE ARG 43 0.639 41.727 14.581 1.00260.75 ATOM 333 CZ ARG 43 -0.241 41.703 13.537 1.00260.75 ATOM 334 NH1 ARG 43 -0.495 40.537 12.875 1.00260.75 ATOM 335 NH2 ARG 43 -0.871 42.851 13.155 1.00260.75 ATOM 336 C ARG 43 5.783 38.683 16.114 1.00260.75 ATOM 337 O ARG 43 6.953 38.616 15.757 1.00260.75 ATOM 338 N SER 44 5.070 37.642 16.600 1.00262.45 ATOM 339 CA SER 44 5.507 36.274 16.685 1.00262.45 ATOM 340 CB SER 44 6.898 35.926 16.119 1.00262.45 ATOM 341 OG SER 44 7.109 34.522 16.137 1.00262.45 ATOM 342 C SER 44 5.524 35.985 18.132 1.00262.45 ATOM 343 O SER 44 4.584 36.331 18.841 1.00262.45 ATOM 344 N LYS 45 6.594 35.332 18.609 1.00166.78 ATOM 345 CA LYS 45 6.706 35.122 20.013 1.00166.78 ATOM 346 CB LYS 45 8.028 34.447 20.410 1.00166.78 ATOM 347 CG LYS 45 8.082 32.960 20.057 1.00166.78 ATOM 348 CD LYS 45 7.040 32.129 20.809 1.00166.78 ATOM 349 CE LYS 45 7.180 30.620 20.602 1.00166.78 ATOM 350 NZ LYS 45 6.802 30.256 19.219 1.00166.78 ATOM 351 C LYS 45 6.696 36.499 20.577 1.00166.78 ATOM 352 O LYS 45 6.071 36.762 21.603 1.00166.78 TER END