####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS007_4-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS007_4-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 17 2 - 18 4.84 29.90 LONGEST_CONTINUOUS_SEGMENT: 17 4 - 20 4.93 29.67 LONGEST_CONTINUOUS_SEGMENT: 17 29 - 45 4.55 32.14 LCS_AVERAGE: 38.22 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 27 - 34 1.67 17.57 LCS_AVERAGE: 13.38 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 5 29 - 33 0.99 17.82 LCS_AVERAGE: 8.37 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 6 17 3 4 4 4 5 6 7 9 10 14 17 19 19 20 20 20 22 22 22 22 LCS_GDT V 3 V 3 4 6 17 3 4 4 5 5 6 7 8 10 11 11 15 17 20 20 20 22 22 22 22 LCS_GDT Q 4 Q 4 4 6 17 3 4 4 5 5 6 7 9 11 14 17 19 19 20 20 20 22 22 22 22 LCS_GDT G 5 G 5 4 6 17 3 4 4 5 5 6 7 9 11 14 17 19 19 20 20 20 22 22 22 22 LCS_GDT P 6 P 6 4 6 17 2 3 4 5 5 6 7 9 11 14 17 19 19 20 20 20 22 22 22 22 LCS_GDT W 7 W 7 4 6 17 3 4 4 5 5 6 7 9 11 14 17 19 19 20 20 20 22 22 22 23 LCS_GDT V 8 V 8 4 5 17 3 4 4 4 5 5 6 8 8 10 14 15 17 17 19 19 22 22 22 22 LCS_GDT G 9 G 9 4 5 17 3 4 4 4 5 5 7 8 10 11 14 15 17 17 19 19 22 22 22 22 LCS_GDT S 10 S 10 4 5 17 3 4 4 4 5 5 7 9 10 14 16 19 19 20 20 20 22 22 22 22 LCS_GDT S 11 S 11 4 5 17 3 4 4 4 5 5 7 9 11 14 17 19 19 20 20 20 22 22 22 23 LCS_GDT Y 12 Y 12 3 3 17 3 3 3 4 5 5 7 9 11 14 17 19 19 20 20 20 22 22 22 23 LCS_GDT V 13 V 13 3 4 17 0 3 3 3 4 5 6 8 11 14 17 19 19 20 20 20 22 22 22 23 LCS_GDT A 14 A 14 3 5 17 3 4 5 5 5 8 9 10 11 14 17 19 19 20 20 20 22 22 22 23 LCS_GDT E 15 E 15 3 5 17 3 4 5 5 6 8 9 10 11 14 17 19 19 20 20 20 22 22 22 23 LCS_GDT T 16 T 16 3 5 17 3 4 5 5 6 8 9 10 11 14 17 19 19 20 20 20 22 22 22 23 LCS_GDT G 17 G 17 3 5 17 3 3 3 4 6 8 9 10 11 14 17 19 19 20 20 20 22 22 22 23 LCS_GDT Q 18 Q 18 3 6 17 3 3 4 5 6 8 9 10 11 13 17 19 19 20 20 20 22 22 22 23 LCS_GDT N 19 N 19 3 6 17 3 3 4 5 6 8 9 10 11 13 15 19 19 20 20 20 22 22 22 23 LCS_GDT W 20 W 20 3 6 17 3 3 5 5 5 7 9 10 11 14 17 19 19 20 20 20 22 22 22 23 LCS_GDT A 21 A 21 3 6 16 2 4 5 5 6 8 9 10 11 13 17 19 19 20 20 20 22 22 22 23 LCS_GDT S 22 S 22 3 6 16 1 3 3 4 5 7 8 10 11 13 17 19 19 20 20 20 22 22 22 23 LCS_GDT L 23 L 23 3 6 16 0 3 4 5 6 8 9 10 11 13 17 19 19 20 20 20 22 22 22 23 LCS_GDT A 24 A 24 3 3 16 1 3 3 3 3 4 8 9 10 13 13 13 15 15 16 18 20 21 22 23 LCS_GDT A 25 A 25 3 4 16 0 3 4 4 5 6 8 9 11 13 13 13 15 15 16 18 20 21 22 23 LCS_GDT N 26 N 26 3 4 16 0 3 3 4 4 6 8 9 11 13 13 13 15 15 16 18 20 21 22 23 LCS_GDT E 27 E 27 4 8 16 1 4 5 6 8 8 8 9 9 10 12 12 14 15 16 16 17 18 20 23 LCS_GDT L 28 L 28 4 8 16 3 4 5 6 8 8 8 9 9 11 12 13 15 15 16 17 18 19 21 23 LCS_GDT R 29 R 29 5 8 17 3 4 5 6 8 8 8 9 9 11 12 13 15 16 17 17 18 19 21 23 LCS_GDT V 30 V 30 5 8 17 3 4 5 6 8 8 8 9 9 10 12 13 15 16 17 17 18 19 21 23 LCS_GDT T 31 T 31 5 8 17 3 4 5 6 8 8 8 11 14 14 15 15 15 16 17 17 18 19 21 23 LCS_GDT E 32 E 32 5 8 17 3 4 5 6 8 8 10 11 14 14 15 15 15 16 17 17 17 19 21 23 LCS_GDT R 33 R 33 5 8 17 3 4 5 6 8 8 10 11 14 14 15 15 15 16 17 17 17 18 21 22 LCS_GDT P 34 P 34 4 8 17 3 4 5 6 8 8 10 11 14 14 15 15 15 16 17 17 17 18 18 19 LCS_GDT F 35 F 35 4 6 17 3 3 4 5 6 8 10 11 14 14 15 15 15 16 17 17 17 17 18 19 LCS_GDT W 36 W 36 4 6 17 3 3 4 5 7 8 10 11 14 14 15 15 15 16 17 17 17 17 18 19 LCS_GDT I 37 I 37 4 6 17 3 3 4 5 7 8 8 11 14 14 15 15 15 16 17 17 17 17 18 19 LCS_GDT S 38 S 38 3 6 17 1 3 4 5 7 8 10 11 14 14 15 15 15 16 17 17 17 17 18 19 LCS_GDT S 39 S 39 3 5 17 0 3 3 4 4 6 10 11 14 14 15 15 15 16 17 17 17 17 18 19 LCS_GDT F 40 F 40 3 6 17 3 3 4 5 5 6 7 9 11 12 15 15 15 16 17 17 17 17 17 18 LCS_GDT I 41 I 41 3 6 17 3 3 4 5 5 6 10 11 14 14 15 15 15 16 17 17 17 17 18 19 LCS_GDT G 42 G 42 4 6 17 3 3 4 5 6 8 10 11 14 14 15 15 15 16 17 17 17 17 18 19 LCS_GDT R 43 R 43 4 6 17 3 3 4 5 6 8 10 11 14 14 15 15 15 16 17 17 17 17 18 19 LCS_GDT S 44 S 44 4 6 17 3 3 4 5 5 6 7 11 14 14 15 15 15 16 17 17 17 17 18 19 LCS_GDT K 45 K 45 4 6 17 3 3 4 5 5 6 7 10 14 14 15 15 15 16 17 17 17 17 18 19 LCS_AVERAGE LCS_A: 19.99 ( 8.37 13.38 38.22 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 3 4 5 6 8 8 10 11 14 14 17 19 19 20 20 20 22 22 22 23 GDT PERCENT_AT 6.82 9.09 11.36 13.64 18.18 18.18 22.73 25.00 31.82 31.82 38.64 43.18 43.18 45.45 45.45 45.45 50.00 50.00 50.00 52.27 GDT RMS_LOCAL 0.04 0.44 0.86 1.24 1.67 1.67 2.60 2.77 3.43 3.43 4.40 4.56 4.56 4.77 4.77 4.77 5.41 5.41 5.41 7.66 GDT RMS_ALL_AT 36.45 20.49 23.04 20.33 17.57 17.57 35.15 35.42 33.04 33.04 27.16 27.02 27.02 27.10 27.10 27.10 27.80 27.80 27.80 17.02 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 15 E 15 # possible swapping detected: E 32 E 32 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 49.828 0 0.041 0.056 53.047 0.000 0.000 - LGA V 3 V 3 52.108 0 0.060 0.080 53.844 0.000 0.000 52.802 LGA Q 4 Q 4 57.733 0 0.033 1.189 65.047 0.000 0.000 64.833 LGA G 5 G 5 60.352 0 0.078 0.078 60.968 0.000 0.000 - LGA P 6 P 6 61.054 0 0.714 0.562 65.807 0.000 0.000 65.807 LGA W 7 W 7 58.171 0 0.477 1.114 59.794 0.000 0.000 57.330 LGA V 8 V 8 55.353 0 0.657 1.486 56.231 0.000 0.000 53.912 LGA G 9 G 9 53.930 0 0.485 0.485 55.085 0.000 0.000 - LGA S 10 S 10 54.579 0 0.636 0.664 55.674 0.000 0.000 55.100 LGA S 11 S 11 52.325 0 0.626 0.569 53.552 0.000 0.000 52.520 LGA Y 12 Y 12 46.109 0 0.634 1.039 48.071 0.000 0.000 41.229 LGA V 13 V 13 44.518 0 0.618 1.473 46.009 0.000 0.000 45.495 LGA A 14 A 14 46.089 0 0.606 0.596 48.131 0.000 0.000 - LGA E 15 E 15 41.230 0 0.646 1.292 43.132 0.000 0.000 41.057 LGA T 16 T 16 36.369 0 0.710 1.387 37.854 0.000 0.000 34.227 LGA G 17 G 17 40.236 0 0.728 0.728 40.236 0.000 0.000 - LGA Q 18 Q 18 39.021 0 0.044 1.161 42.146 0.000 0.000 37.700 LGA N 19 N 19 43.967 0 0.282 1.256 49.093 0.000 0.000 49.093 LGA W 20 W 20 41.330 0 0.433 1.235 44.024 0.000 0.000 41.690 LGA A 21 A 21 40.378 0 0.657 0.623 41.289 0.000 0.000 - LGA S 22 S 22 35.160 0 0.616 0.596 37.507 0.000 0.000 37.199 LGA L 23 L 23 35.010 0 0.632 1.397 38.470 0.000 0.000 38.470 LGA A 24 A 24 34.183 0 0.629 0.596 35.457 0.000 0.000 - LGA A 25 A 25 27.166 0 0.590 0.586 29.553 0.000 0.000 - LGA N 26 N 26 24.696 0 0.618 1.038 27.241 0.000 0.000 25.403 LGA E 27 E 27 24.304 0 0.671 1.126 26.665 0.000 0.000 26.665 LGA L 28 L 28 20.002 0 0.631 1.253 21.863 0.000 0.000 21.863 LGA R 29 R 29 14.520 0 0.372 1.637 19.580 0.000 0.000 17.396 LGA V 30 V 30 10.115 0 0.036 0.107 12.434 0.000 0.000 9.503 LGA T 31 T 31 6.664 0 0.697 0.640 9.620 0.909 0.519 6.308 LGA E 32 E 32 1.933 0 0.026 1.323 4.407 26.364 26.465 2.317 LGA R 33 R 33 1.869 0 0.129 1.199 14.209 40.909 15.041 14.209 LGA P 34 P 34 2.755 0 0.169 0.516 5.167 28.636 17.922 5.135 LGA F 35 F 35 3.190 0 0.139 1.276 8.819 43.182 15.868 8.819 LGA W 36 W 36 2.859 0 0.037 1.136 7.601 20.455 15.325 4.764 LGA I 37 I 37 3.765 0 0.672 1.227 7.411 24.545 12.273 7.161 LGA S 38 S 38 2.382 0 0.691 0.842 3.076 43.182 39.697 2.427 LGA S 39 S 39 3.724 0 0.688 0.816 6.915 10.000 6.667 6.915 LGA F 40 F 40 5.690 0 0.653 0.755 13.982 9.545 3.471 13.982 LGA I 41 I 41 3.641 0 0.086 1.303 6.844 15.455 9.091 6.709 LGA G 42 G 42 1.775 0 0.700 0.700 2.674 48.636 48.636 - LGA R 43 R 43 1.117 0 0.056 1.375 10.321 40.000 16.198 10.321 LGA S 44 S 44 5.929 0 0.067 0.105 8.892 5.909 3.939 8.892 LGA K 45 K 45 9.082 0 0.080 1.220 17.738 0.000 0.000 17.738 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 15.985 15.824 16.215 8.130 5.253 2.234 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 11 2.77 23.295 22.394 0.383 LGA_LOCAL RMSD: 2.772 Number of atoms: 11 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 35.421 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 15.985 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.463174 * X + -0.271248 * Y + -0.843738 * Z + 24.575897 Y_new = -0.641847 * X + 0.553823 * Y + -0.530389 * Z + 70.977272 Z_new = 0.611149 * X + 0.787213 * Y + 0.082416 * Z + 22.864494 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.945703 -0.657511 1.466483 [DEG: -54.1848 -37.6726 84.0233 ] ZXZ: -1.009599 1.488286 0.660149 [DEG: -57.8458 85.2725 37.8238 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS007_4-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS007_4-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 11 2.77 22.394 15.98 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS007_4-D1 PFRMAT TS TARGET T0953s2 MODEL 4 PARENT 3t04_D ATOM 9 N ALA 2 -35.756 40.710 30.565 1.00178.09 ATOM 10 CA ALA 2 -35.485 41.342 31.818 1.00178.09 ATOM 11 CB ALA 2 -35.222 42.853 31.703 1.00178.09 ATOM 12 C ALA 2 -36.688 41.149 32.677 1.00178.09 ATOM 13 O ALA 2 -37.808 41.034 32.181 1.00178.09 ATOM 14 N VAL 3 -36.482 41.089 34.005 1.00 72.24 ATOM 15 CA VAL 3 -37.600 40.903 34.880 1.00 72.24 ATOM 16 CB VAL 3 -37.295 40.075 36.095 1.00 72.24 ATOM 17 CG1 VAL 3 -38.560 40.000 36.968 1.00 72.24 ATOM 18 CG2 VAL 3 -36.763 38.706 35.641 1.00 72.24 ATOM 19 C VAL 3 -37.993 42.255 35.364 1.00 72.24 ATOM 20 O VAL 3 -37.144 43.071 35.718 1.00 72.24 ATOM 21 N GLN 4 -39.309 42.529 35.381 1.00221.97 ATOM 22 CA GLN 4 -39.771 43.811 35.809 1.00221.97 ATOM 23 CB GLN 4 -41.238 44.091 35.447 1.00221.97 ATOM 24 CG GLN 4 -41.731 45.467 35.904 1.00221.97 ATOM 25 CD GLN 4 -43.203 45.602 35.526 1.00221.97 ATOM 26 OE1 GLN 4 -43.653 46.659 35.087 1.00221.97 ATOM 27 NE2 GLN 4 -43.979 44.501 35.709 1.00221.97 ATOM 28 C GLN 4 -39.670 43.859 37.293 1.00221.97 ATOM 29 O GLN 4 -39.748 42.836 37.969 1.00221.97 ATOM 30 N GLY 5 -39.472 45.072 37.836 1.00 89.06 ATOM 31 CA GLY 5 -39.409 45.213 39.257 1.00 89.06 ATOM 32 C GLY 5 -38.016 44.931 39.700 1.00 89.06 ATOM 33 O GLY 5 -37.080 44.791 38.914 1.00 89.06 ATOM 34 N PRO 6 -37.899 44.872 40.993 1.00 86.48 ATOM 35 CA PRO 6 -36.642 44.597 41.623 1.00 86.48 ATOM 36 CD PRO 6 -38.789 45.630 41.852 1.00 86.48 ATOM 37 CB PRO 6 -36.786 45.062 43.075 1.00 86.48 ATOM 38 CG PRO 6 -38.295 45.306 43.267 1.00 86.48 ATOM 39 C PRO 6 -36.315 43.150 41.477 1.00 86.48 ATOM 40 O PRO 6 -37.218 42.353 41.227 1.00 86.48 ATOM 41 N TRP 7 -35.025 42.795 41.614 1.00228.62 ATOM 42 CA TRP 7 -34.624 41.429 41.479 1.00228.62 ATOM 43 CB TRP 7 -33.584 41.212 40.364 1.00228.62 ATOM 44 CG TRP 7 -33.134 39.783 40.182 1.00228.62 ATOM 45 CD2 TRP 7 -31.792 39.323 40.408 1.00228.62 ATOM 46 CD1 TRP 7 -33.841 38.705 39.739 1.00228.62 ATOM 47 NE1 TRP 7 -33.027 37.599 39.679 1.00228.62 ATOM 48 CE2 TRP 7 -31.761 37.966 40.085 1.00228.62 ATOM 49 CE3 TRP 7 -30.676 39.978 40.839 1.00228.62 ATOM 50 CZ2 TRP 7 -30.609 37.241 40.191 1.00228.62 ATOM 51 CZ3 TRP 7 -29.517 39.242 40.952 1.00228.62 ATOM 52 CH2 TRP 7 -29.484 37.901 40.632 1.00228.62 ATOM 53 C TRP 7 -34.033 41.019 42.789 1.00228.62 ATOM 54 O TRP 7 -33.732 41.858 43.636 1.00228.62 ATOM 55 N VAL 8 -33.865 39.699 42.987 1.00119.64 ATOM 56 CA VAL 8 -33.381 39.190 44.238 1.00119.64 ATOM 57 CB VAL 8 -33.274 37.693 44.267 1.00119.64 ATOM 58 CG1 VAL 8 -34.680 37.093 44.086 1.00119.64 ATOM 59 CG2 VAL 8 -32.269 37.261 43.185 1.00119.64 ATOM 60 C VAL 8 -32.019 39.742 44.488 1.00119.64 ATOM 61 O VAL 8 -31.216 39.901 43.570 1.00119.64 ATOM 62 N GLY 9 -31.740 40.079 45.762 1.00 73.16 ATOM 63 CA GLY 9 -30.461 40.621 46.107 1.00 73.16 ATOM 64 C GLY 9 -30.446 42.002 45.558 1.00 73.16 ATOM 65 O GLY 9 -31.481 42.519 45.141 1.00 73.16 ATOM 66 N SER 10 -29.267 42.651 45.547 1.00100.26 ATOM 67 CA SER 10 -29.259 43.953 44.958 1.00100.26 ATOM 68 CB SER 10 -27.962 44.746 45.207 1.00100.26 ATOM 69 OG SER 10 -26.855 44.084 44.614 1.00100.26 ATOM 70 C SER 10 -29.387 43.721 43.493 1.00100.26 ATOM 71 O SER 10 -28.515 43.117 42.870 1.00100.26 ATOM 72 N SER 11 -30.498 44.195 42.903 1.00156.25 ATOM 73 CA SER 11 -30.682 43.992 41.501 1.00156.25 ATOM 74 CB SER 11 -32.161 43.934 41.079 1.00156.25 ATOM 75 OG SER 11 -32.260 43.732 39.676 1.00156.25 ATOM 76 C SER 11 -30.069 45.159 40.816 1.00156.25 ATOM 77 O SER 11 -30.199 46.294 41.270 1.00156.25 ATOM 78 N TYR 12 -29.344 44.900 39.712 1.00255.23 ATOM 79 CA TYR 12 -28.773 45.997 38.998 1.00255.23 ATOM 80 CB TYR 12 -27.442 46.491 39.594 1.00255.23 ATOM 81 CG TYR 12 -26.857 47.475 38.640 1.00255.23 ATOM 82 CD1 TYR 12 -27.339 48.761 38.562 1.00255.23 ATOM 83 CD2 TYR 12 -25.811 47.106 37.825 1.00255.23 ATOM 84 CE1 TYR 12 -26.787 49.660 37.678 1.00255.23 ATOM 85 CE2 TYR 12 -25.254 48.000 36.941 1.00255.23 ATOM 86 CZ TYR 12 -25.745 49.280 36.864 1.00255.23 ATOM 87 OH TYR 12 -25.178 50.199 35.957 1.00255.23 ATOM 88 C TYR 12 -28.500 45.563 37.598 1.00255.23 ATOM 89 O TYR 12 -27.753 44.614 37.360 1.00255.23 ATOM 90 N VAL 13 -29.128 46.253 36.628 1.00149.70 ATOM 91 CA VAL 13 -28.847 45.996 35.249 1.00149.70 ATOM 92 CB VAL 13 -29.910 45.216 34.524 1.00149.70 ATOM 93 CG1 VAL 13 -30.018 43.818 35.156 1.00149.70 ATOM 94 CG2 VAL 13 -31.222 46.018 34.550 1.00149.70 ATOM 95 C VAL 13 -28.771 47.341 34.611 1.00149.70 ATOM 96 O VAL 13 -29.600 48.209 34.880 1.00149.70 ATOM 97 N ALA 14 -27.756 47.570 33.762 1.00259.13 ATOM 98 CA ALA 14 -27.676 48.859 33.145 1.00259.13 ATOM 99 CB ALA 14 -27.406 50.005 34.137 1.00259.13 ATOM 100 C ALA 14 -26.535 48.828 32.187 1.00259.13 ATOM 101 O ALA 14 -25.761 47.873 32.154 1.00259.13 ATOM 102 N GLU 15 -26.424 49.880 31.357 1.00226.83 ATOM 103 CA GLU 15 -25.334 49.967 30.434 1.00226.83 ATOM 104 CB GLU 15 -25.571 50.966 29.289 1.00226.83 ATOM 105 CG GLU 15 -26.669 50.512 28.323 1.00226.83 ATOM 106 CD GLU 15 -26.828 51.557 27.227 1.00226.83 ATOM 107 OE1 GLU 15 -26.109 52.590 27.286 1.00226.83 ATOM 108 OE2 GLU 15 -27.670 51.333 26.316 1.00226.83 ATOM 109 C GLU 15 -24.145 50.413 31.221 1.00226.83 ATOM 110 O GLU 15 -24.281 50.931 32.328 1.00226.83 ATOM 111 N THR 16 -22.934 50.201 30.676 1.00237.46 ATOM 112 CA THR 16 -21.760 50.559 31.411 1.00237.46 ATOM 113 CB THR 16 -20.490 50.030 30.813 1.00237.46 ATOM 114 OG1 THR 16 -19.401 50.253 31.698 1.00237.46 ATOM 115 CG2 THR 16 -20.242 50.736 29.469 1.00237.46 ATOM 116 C THR 16 -21.661 52.045 31.449 1.00237.46 ATOM 117 O THR 16 -22.302 52.746 30.666 1.00237.46 ATOM 118 N GLY 17 -20.859 52.554 32.405 1.00125.07 ATOM 119 CA GLY 17 -20.666 53.963 32.571 1.00125.07 ATOM 120 C GLY 17 -19.458 54.126 33.433 1.00125.07 ATOM 121 O GLY 17 -18.880 53.143 33.896 1.00125.07 ATOM 122 N GLN 18 -19.036 55.381 33.668 1.00112.53 ATOM 123 CA GLN 18 -17.864 55.592 34.464 1.00112.53 ATOM 124 CB GLN 18 -16.727 56.281 33.691 1.00112.53 ATOM 125 CG GLN 18 -15.467 56.513 34.526 1.00112.53 ATOM 126 CD GLN 18 -14.442 57.195 33.633 1.00112.53 ATOM 127 OE1 GLN 18 -14.666 58.298 33.144 1.00112.53 ATOM 128 NE2 GLN 18 -13.285 56.513 33.409 1.00112.53 ATOM 129 C GLN 18 -18.226 56.495 35.592 1.00112.53 ATOM 130 O GLN 18 -19.027 57.417 35.439 1.00112.53 ATOM 131 N ASN 19 -17.637 56.236 36.774 1.00214.77 ATOM 132 CA ASN 19 -17.889 57.027 37.942 1.00214.77 ATOM 133 CB ASN 19 -17.492 58.501 37.762 1.00214.77 ATOM 134 CG ASN 19 -17.550 59.177 39.123 1.00214.77 ATOM 135 OD1 ASN 19 -18.516 59.862 39.455 1.00214.77 ATOM 136 ND2 ASN 19 -16.485 58.966 39.943 1.00214.77 ATOM 137 C ASN 19 -19.351 56.950 38.217 1.00214.77 ATOM 138 O ASN 19 -19.925 57.812 38.880 1.00214.77 ATOM 139 N TRP 20 -19.974 55.869 37.719 1.00158.09 ATOM 140 CA TRP 20 -21.371 55.610 37.873 1.00158.09 ATOM 141 CB TRP 20 -21.775 55.312 39.327 1.00158.09 ATOM 142 CG TRP 20 -23.113 54.625 39.434 1.00158.09 ATOM 143 CD2 TRP 20 -23.266 53.213 39.232 1.00158.09 ATOM 144 CD1 TRP 20 -24.359 55.118 39.691 1.00158.09 ATOM 145 NE1 TRP 20 -25.280 54.095 39.661 1.00158.09 ATOM 146 CE2 TRP 20 -24.620 52.917 39.376 1.00158.09 ATOM 147 CE3 TRP 20 -22.348 52.241 38.944 1.00158.09 ATOM 148 CZ2 TRP 20 -25.079 51.638 39.237 1.00158.09 ATOM 149 CZ3 TRP 20 -22.814 50.954 38.803 1.00158.09 ATOM 150 CH2 TRP 20 -24.154 50.658 38.945 1.00158.09 ATOM 151 C TRP 20 -22.101 56.816 37.369 1.00158.09 ATOM 152 O TRP 20 -23.144 57.199 37.896 1.00158.09 ATOM 153 N ALA 21 -21.545 57.442 36.312 1.00 30.89 ATOM 154 CA ALA 21 -22.125 58.606 35.710 1.00 30.89 ATOM 155 CB ALA 21 -21.486 59.925 36.181 1.00 30.89 ATOM 156 C ALA 21 -21.868 58.482 34.241 1.00 30.89 ATOM 157 O ALA 21 -20.993 57.727 33.823 1.00 30.89 ATOM 158 N SER 22 -22.649 59.202 33.411 1.00 31.74 ATOM 159 CA SER 22 -22.481 59.107 31.988 1.00 31.74 ATOM 160 CB SER 22 -23.692 59.632 31.199 1.00 31.74 ATOM 161 OG SER 22 -23.886 61.014 31.461 1.00 31.74 ATOM 162 C SER 22 -21.284 59.906 31.576 1.00 31.74 ATOM 163 O SER 22 -20.926 60.886 32.226 1.00 31.74 ATOM 164 N LEU 23 -20.612 59.474 30.486 1.00 64.11 ATOM 165 CA LEU 23 -19.475 60.191 29.982 1.00 64.11 ATOM 166 CB LEU 23 -18.172 59.915 30.756 1.00 64.11 ATOM 167 CG LEU 23 -16.990 60.799 30.311 1.00 64.11 ATOM 168 CD1 LEU 23 -17.271 62.282 30.599 1.00 64.11 ATOM 169 CD2 LEU 23 -15.661 60.324 30.918 1.00 64.11 ATOM 170 C LEU 23 -19.269 59.740 28.569 1.00 64.11 ATOM 171 O LEU 23 -19.981 58.865 28.082 1.00 64.11 ATOM 172 N ALA 24 -18.307 60.361 27.852 1.00 38.07 ATOM 173 CA ALA 24 -18.005 59.931 26.516 1.00 38.07 ATOM 174 CB ALA 24 -17.873 61.087 25.512 1.00 38.07 ATOM 175 C ALA 24 -16.671 59.259 26.577 1.00 38.07 ATOM 176 O ALA 24 -15.702 59.827 27.077 1.00 38.07 ATOM 177 N ALA 25 -16.589 58.013 26.074 1.00 46.52 ATOM 178 CA ALA 25 -15.348 57.303 26.148 1.00 46.52 ATOM 179 CB ALA 25 -15.510 55.774 26.203 1.00 46.52 ATOM 180 C ALA 25 -14.502 57.622 24.964 1.00 46.52 ATOM 181 O ALA 25 -14.995 57.931 23.882 1.00 46.52 ATOM 182 N ASN 26 -13.175 57.554 25.169 1.00 62.14 ATOM 183 CA ASN 26 -12.231 57.737 24.109 1.00 62.14 ATOM 184 CB ASN 26 -10.848 58.209 24.591 1.00 62.14 ATOM 185 CG ASN 26 -10.999 59.616 25.158 1.00 62.14 ATOM 186 OD1 ASN 26 -11.034 59.806 26.374 1.00 62.14 ATOM 187 ND2 ASN 26 -11.093 60.629 24.257 1.00 62.14 ATOM 188 C ASN 26 -12.066 56.379 23.506 1.00 62.14 ATOM 189 O ASN 26 -12.707 55.424 23.940 1.00 62.14 ATOM 190 N GLU 27 -11.231 56.258 22.459 1.00 90.82 ATOM 191 CA GLU 27 -11.038 54.967 21.860 1.00 90.82 ATOM 192 CB GLU 27 -10.335 54.996 20.494 1.00 90.82 ATOM 193 CG GLU 27 -8.921 55.573 20.537 1.00 90.82 ATOM 194 CD GLU 27 -8.300 55.363 19.163 1.00 90.82 ATOM 195 OE1 GLU 27 -8.047 54.181 18.805 1.00 90.82 ATOM 196 OE2 GLU 27 -8.071 56.379 18.454 1.00 90.82 ATOM 197 C GLU 27 -10.197 54.143 22.784 1.00 90.82 ATOM 198 O GLU 27 -9.440 54.675 23.594 1.00 90.82 ATOM 199 N LEU 28 -10.328 52.803 22.685 1.00161.44 ATOM 200 CA LEU 28 -9.621 51.904 23.553 1.00161.44 ATOM 201 CB LEU 28 -10.211 50.477 23.592 1.00161.44 ATOM 202 CG LEU 28 -10.690 49.931 22.233 1.00161.44 ATOM 203 CD1 LEU 28 -11.937 50.680 21.737 1.00161.44 ATOM 204 CD2 LEU 28 -9.562 49.923 21.197 1.00161.44 ATOM 205 C LEU 28 -8.170 51.841 23.191 1.00161.44 ATOM 206 O LEU 28 -7.781 51.995 22.033 1.00161.44 ATOM 207 N ARG 29 -7.332 51.625 24.226 1.00127.39 ATOM 208 CA ARG 29 -5.902 51.579 24.125 1.00127.39 ATOM 209 CB ARG 29 -5.245 51.369 25.497 1.00127.39 ATOM 210 CG ARG 29 -3.768 51.756 25.568 1.00127.39 ATOM 211 CD ARG 29 -3.160 51.460 26.941 1.00127.39 ATOM 212 NE ARG 29 -1.849 52.161 27.044 1.00127.39 ATOM 213 CZ ARG 29 -1.799 53.448 27.501 1.00127.39 ATOM 214 NH1 ARG 29 -2.951 54.116 27.800 1.00127.39 ATOM 215 NH2 ARG 29 -0.593 54.066 27.670 1.00127.39 ATOM 216 C ARG 29 -5.511 50.423 23.262 1.00127.39 ATOM 217 O ARG 29 -4.628 50.544 22.415 1.00127.39 ATOM 218 N VAL 30 -6.154 49.257 23.454 1.00 89.49 ATOM 219 CA VAL 30 -5.783 48.144 22.632 1.00 89.49 ATOM 220 CB VAL 30 -5.916 46.820 23.323 1.00 89.49 ATOM 221 CG1 VAL 30 -5.580 45.707 22.316 1.00 89.49 ATOM 222 CG2 VAL 30 -5.021 46.824 24.574 1.00 89.49 ATOM 223 C VAL 30 -6.724 48.133 21.475 1.00 89.49 ATOM 224 O VAL 30 -7.896 47.789 21.624 1.00 89.49 ATOM 225 N THR 31 -6.223 48.492 20.275 1.00279.59 ATOM 226 CA THR 31 -7.069 48.547 19.118 1.00279.59 ATOM 227 CB THR 31 -7.048 49.881 18.427 1.00279.59 ATOM 228 OG1 THR 31 -5.744 50.150 17.935 1.00279.59 ATOM 229 CG2 THR 31 -7.462 50.975 19.423 1.00279.59 ATOM 230 C THR 31 -6.546 47.562 18.129 1.00279.59 ATOM 231 O THR 31 -5.335 47.415 17.966 1.00279.59 ATOM 232 N GLU 32 -7.457 46.833 17.453 1.00301.30 ATOM 233 CA GLU 32 -6.998 45.907 16.463 1.00301.30 ATOM 234 CB GLU 32 -6.592 44.552 17.050 1.00301.30 ATOM 235 CG GLU 32 -5.927 43.601 16.054 1.00301.30 ATOM 236 CD GLU 32 -4.488 44.056 15.882 1.00301.30 ATOM 237 OE1 GLU 32 -4.113 45.073 16.524 1.00301.30 ATOM 238 OE2 GLU 32 -3.746 43.400 15.101 1.00301.30 ATOM 239 C GLU 32 -8.118 45.645 15.514 1.00301.30 ATOM 240 O GLU 32 -9.273 45.509 15.914 1.00301.30 ATOM 241 N ARG 33 -7.795 45.592 14.210 1.00237.41 ATOM 242 CA ARG 33 -8.775 45.247 13.227 1.00237.41 ATOM 243 CB ARG 33 -8.962 46.325 12.148 1.00237.41 ATOM 244 CG ARG 33 -9.993 45.953 11.081 1.00237.41 ATOM 245 CD ARG 33 -9.851 46.771 9.796 1.00237.41 ATOM 246 NE ARG 33 -9.907 48.213 10.168 1.00237.41 ATOM 247 CZ ARG 33 -11.080 48.910 10.102 1.00237.41 ATOM 248 NH1 ARG 33 -12.237 48.286 9.734 1.00237.41 ATOM 249 NH2 ARG 33 -11.084 50.244 10.391 1.00237.41 ATOM 250 C ARG 33 -8.221 44.054 12.526 1.00237.41 ATOM 251 O ARG 33 -7.386 44.189 11.634 1.00237.41 ATOM 252 N PRO 34 -8.664 42.891 12.910 1.00113.00 ATOM 253 CA PRO 34 -8.158 41.686 12.319 1.00113.00 ATOM 254 CD PRO 34 -10.003 42.714 13.445 1.00113.00 ATOM 255 CB PRO 34 -9.004 40.565 12.908 1.00113.00 ATOM 256 CG PRO 34 -10.366 41.254 13.121 1.00113.00 ATOM 257 C PRO 34 -8.345 41.753 10.840 1.00113.00 ATOM 258 O PRO 34 -9.480 41.906 10.396 1.00113.00 ATOM 259 N PHE 35 -7.257 41.635 10.057 1.00286.23 ATOM 260 CA PHE 35 -7.419 41.640 8.636 1.00286.23 ATOM 261 CB PHE 35 -8.255 42.826 8.113 1.00286.23 ATOM 262 CG PHE 35 -8.775 42.466 6.759 1.00286.23 ATOM 263 CD1 PHE 35 -9.846 41.607 6.645 1.00286.23 ATOM 264 CD2 PHE 35 -8.226 42.989 5.609 1.00286.23 ATOM 265 CE1 PHE 35 -10.351 41.258 5.414 1.00286.23 ATOM 266 CE2 PHE 35 -8.725 42.644 4.375 1.00286.23 ATOM 267 CZ PHE 35 -9.787 41.777 4.275 1.00286.23 ATOM 268 C PHE 35 -6.035 41.728 8.080 1.00286.23 ATOM 269 O PHE 35 -5.058 41.665 8.825 1.00286.23 ATOM 270 N TRP 36 -5.903 41.867 6.750 1.00247.14 ATOM 271 CA TRP 36 -4.593 41.949 6.181 1.00247.14 ATOM 272 CB TRP 36 -4.588 42.046 4.646 1.00247.14 ATOM 273 CG TRP 36 -3.202 42.131 4.054 1.00247.14 ATOM 274 CD2 TRP 36 -2.434 43.345 3.997 1.00247.14 ATOM 275 CD1 TRP 36 -2.427 41.156 3.502 1.00247.14 ATOM 276 NE1 TRP 36 -1.221 41.682 3.104 1.00247.14 ATOM 277 CE2 TRP 36 -1.212 43.029 3.404 1.00247.14 ATOM 278 CE3 TRP 36 -2.725 44.611 4.411 1.00247.14 ATOM 279 CZ2 TRP 36 -0.256 43.986 3.212 1.00247.14 ATOM 280 CZ3 TRP 36 -1.762 45.576 4.215 1.00247.14 ATOM 281 CH2 TRP 36 -0.553 45.267 3.628 1.00247.14 ATOM 282 C TRP 36 -3.935 43.180 6.708 1.00247.14 ATOM 283 O TRP 36 -4.536 44.251 6.775 1.00247.14 ATOM 284 N ILE 37 -2.663 43.039 7.121 1.00115.24 ATOM 285 CA ILE 37 -1.930 44.155 7.635 1.00115.24 ATOM 286 CB ILE 37 -1.805 44.155 9.134 1.00115.24 ATOM 287 CG1 ILE 37 -1.025 42.920 9.609 1.00115.24 ATOM 288 CG2 ILE 37 -3.219 44.266 9.731 1.00115.24 ATOM 289 CD1 ILE 37 -0.636 42.968 11.087 1.00115.24 ATOM 290 C ILE 37 -0.562 44.074 7.044 1.00115.24 ATOM 291 O ILE 37 -0.193 43.068 6.440 1.00115.24 ATOM 292 N SER 38 0.223 45.160 7.167 1.00136.92 ATOM 293 CA SER 38 1.546 45.141 6.620 1.00136.92 ATOM 294 CB SER 38 2.295 46.478 6.778 1.00136.92 ATOM 295 OG SER 38 3.596 46.378 6.218 1.00136.92 ATOM 296 C SER 38 2.318 44.097 7.351 1.00136.92 ATOM 297 O SER 38 2.073 43.835 8.528 1.00136.92 ATOM 298 N SER 39 3.272 43.454 6.650 1.00162.32 ATOM 299 CA SER 39 4.050 42.436 7.286 1.00162.32 ATOM 300 CB SER 39 3.911 41.060 6.613 1.00162.32 ATOM 301 OG SER 39 4.722 40.101 7.275 1.00162.32 ATOM 302 C SER 39 5.484 42.843 7.202 1.00162.32 ATOM 303 O SER 39 5.933 43.394 6.197 1.00162.32 ATOM 304 N PHE 40 6.234 42.596 8.292 1.00216.68 ATOM 305 CA PHE 40 7.631 42.903 8.326 1.00216.68 ATOM 306 CB PHE 40 7.973 44.292 8.896 1.00216.68 ATOM 307 CG PHE 40 7.752 45.297 7.815 1.00216.68 ATOM 308 CD1 PHE 40 6.513 45.849 7.585 1.00216.68 ATOM 309 CD2 PHE 40 8.812 45.689 7.028 1.00216.68 ATOM 310 CE1 PHE 40 6.334 46.775 6.582 1.00216.68 ATOM 311 CE2 PHE 40 8.643 46.611 6.025 1.00216.68 ATOM 312 CZ PHE 40 7.401 47.157 5.802 1.00216.68 ATOM 313 C PHE 40 8.304 41.877 9.172 1.00216.68 ATOM 314 O PHE 40 7.653 41.068 9.831 1.00216.68 ATOM 315 N ILE 41 9.649 41.886 9.149 1.00178.27 ATOM 316 CA ILE 41 10.427 40.942 9.891 1.00178.27 ATOM 317 CB ILE 41 11.895 40.970 9.561 1.00178.27 ATOM 318 CG1 ILE 41 12.515 42.340 9.898 1.00178.27 ATOM 319 CG2 ILE 41 12.045 40.572 8.082 1.00178.27 ATOM 320 CD1 ILE 41 11.976 43.487 9.044 1.00178.27 ATOM 321 C ILE 41 10.279 41.241 11.346 1.00178.27 ATOM 322 O ILE 41 10.248 42.398 11.760 1.00178.27 ATOM 323 N GLY 42 10.159 40.173 12.160 1.00 84.11 ATOM 324 CA GLY 42 10.028 40.326 13.578 1.00 84.11 ATOM 325 C GLY 42 8.643 39.927 13.968 1.00 84.11 ATOM 326 O GLY 42 7.708 39.991 13.174 1.00 84.11 ATOM 327 N ARG 43 8.498 39.489 15.235 1.00294.66 ATOM 328 CA ARG 43 7.233 39.067 15.754 1.00294.66 ATOM 329 CB ARG 43 7.347 38.241 17.050 1.00294.66 ATOM 330 CG ARG 43 8.041 38.980 18.197 1.00294.66 ATOM 331 CD ARG 43 9.554 39.127 18.011 1.00294.66 ATOM 332 NE ARG 43 10.117 37.760 17.816 1.00294.66 ATOM 333 CZ ARG 43 11.397 37.476 18.197 1.00294.66 ATOM 334 NH1 ARG 43 12.161 38.429 18.808 1.00294.66 ATOM 335 NH2 ARG 43 11.905 36.230 17.976 1.00294.66 ATOM 336 C ARG 43 6.432 40.288 16.058 1.00294.66 ATOM 337 O ARG 43 6.983 41.360 16.304 1.00294.66 ATOM 338 N SER 44 5.092 40.155 16.012 1.00174.95 ATOM 339 CA SER 44 4.241 41.269 16.300 1.00174.95 ATOM 340 CB SER 44 2.801 41.103 15.786 1.00174.95 ATOM 341 OG SER 44 2.786 41.077 14.366 1.00174.95 ATOM 342 C SER 44 4.190 41.429 17.783 1.00174.95 ATOM 343 O SER 44 4.514 40.510 18.535 1.00174.95 ATOM 344 N LYS 45 3.788 42.629 18.239 1.00270.01 ATOM 345 CA LYS 45 3.726 42.918 19.638 1.00270.01 ATOM 346 CB LYS 45 4.037 44.390 19.964 1.00270.01 ATOM 347 CG LYS 45 3.095 45.385 19.278 1.00270.01 ATOM 348 CD LYS 45 3.138 45.341 17.746 1.00270.01 ATOM 349 CE LYS 45 4.245 46.201 17.131 1.00270.01 ATOM 350 NZ LYS 45 4.194 46.120 15.654 1.00270.01 ATOM 351 C LYS 45 2.343 42.615 20.116 1.00270.01 ATOM 352 O LYS 45 1.428 42.390 19.325 1.00270.01 TER END