####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS004_5-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS004_5-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 21 3 - 23 4.94 16.21 LCS_AVERAGE: 42.10 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 19 - 29 1.84 15.53 LONGEST_CONTINUOUS_SEGMENT: 11 20 - 30 1.91 16.51 LCS_AVERAGE: 18.60 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 20 - 29 0.60 16.54 LCS_AVERAGE: 14.82 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 3 18 3 3 5 5 5 6 8 13 16 16 18 20 21 23 26 27 29 31 31 31 LCS_GDT V 3 V 3 3 4 21 3 4 5 5 7 8 10 13 16 16 18 20 21 23 26 27 29 31 31 31 LCS_GDT Q 4 Q 4 7 8 21 3 5 8 8 8 9 9 11 16 16 18 20 21 23 26 27 29 31 31 31 LCS_GDT G 5 G 5 7 8 21 0 3 8 8 8 11 11 13 16 16 18 20 21 23 26 27 29 31 31 31 LCS_GDT P 6 P 6 7 8 21 3 5 8 8 8 11 11 13 14 16 18 20 21 23 26 27 29 31 31 31 LCS_GDT W 7 W 7 7 8 21 3 5 8 8 8 11 11 13 14 16 18 20 21 23 26 27 29 31 31 31 LCS_GDT V 8 V 8 7 8 21 3 5 8 8 8 9 9 11 14 16 18 20 21 23 26 27 29 31 31 31 LCS_GDT G 9 G 9 7 8 21 3 5 8 8 8 9 9 11 11 12 14 15 19 22 25 27 29 31 31 31 LCS_GDT S 10 S 10 8 8 21 6 7 8 8 8 9 9 11 11 13 18 20 21 23 26 27 29 31 31 31 LCS_GDT S 11 S 11 8 8 21 6 7 8 8 8 9 9 10 13 14 16 18 21 23 25 27 29 31 31 31 LCS_GDT Y 12 Y 12 8 8 21 5 7 8 8 8 8 9 11 13 14 16 17 21 23 25 27 29 31 31 31 LCS_GDT V 13 V 13 8 8 21 6 7 8 8 8 8 9 11 13 16 18 20 21 23 26 27 29 31 31 31 LCS_GDT A 14 A 14 8 8 21 6 7 8 8 8 8 10 11 16 16 18 20 21 23 26 27 29 31 31 31 LCS_GDT E 15 E 15 8 8 21 6 7 8 8 8 9 10 10 13 14 16 19 21 23 25 27 29 31 31 31 LCS_GDT T 16 T 16 8 8 21 6 7 8 8 8 8 10 11 16 16 18 20 21 23 26 27 29 31 31 31 LCS_GDT G 17 G 17 8 8 21 3 5 8 8 8 8 9 10 11 15 18 19 21 23 26 27 29 31 31 31 LCS_GDT Q 18 Q 18 4 5 21 3 3 5 5 7 8 10 11 16 16 18 20 21 23 26 27 29 31 31 31 LCS_GDT N 19 N 19 4 11 21 3 3 4 5 6 11 11 13 16 16 18 20 21 23 26 27 29 31 31 31 LCS_GDT W 20 W 20 10 11 21 7 10 10 10 10 10 10 11 13 14 17 18 21 23 26 27 29 31 31 31 LCS_GDT A 21 A 21 10 11 21 7 10 10 10 10 11 11 13 16 16 18 20 21 23 26 27 29 31 31 31 LCS_GDT S 22 S 22 10 11 21 7 10 10 10 10 11 11 13 16 16 18 20 21 23 26 27 29 31 31 31 LCS_GDT L 23 L 23 10 11 21 7 10 10 10 10 11 11 13 16 16 18 20 21 23 26 27 29 31 31 31 LCS_GDT A 24 A 24 10 11 20 7 10 10 10 10 11 11 13 16 16 18 20 21 23 26 27 29 31 31 31 LCS_GDT A 25 A 25 10 11 20 7 10 10 10 10 11 11 13 16 16 18 20 21 23 26 27 29 31 31 31 LCS_GDT N 26 N 26 10 11 17 6 10 10 10 10 11 11 13 16 16 18 20 21 23 26 27 29 31 31 31 LCS_GDT E 27 E 27 10 11 17 6 10 10 10 10 11 11 13 14 16 18 20 21 23 26 27 29 31 31 31 LCS_GDT L 28 L 28 10 11 17 6 10 10 10 10 10 10 11 12 13 14 17 21 22 26 27 29 31 31 31 LCS_GDT R 29 R 29 10 11 17 7 10 10 10 10 10 10 11 12 12 14 19 21 22 26 27 29 31 31 31 LCS_GDT V 30 V 30 4 11 17 3 4 4 5 5 6 9 11 12 13 14 17 21 22 24 27 28 31 31 31 LCS_GDT T 31 T 31 4 5 17 3 4 4 6 6 7 8 10 16 16 18 19 21 23 26 27 29 31 31 31 LCS_GDT E 32 E 32 4 5 17 3 4 4 5 5 7 8 9 16 16 17 19 21 23 26 27 29 31 31 31 LCS_GDT R 33 R 33 4 5 17 2 4 4 6 6 7 8 9 11 12 13 15 18 21 24 25 27 29 31 31 LCS_GDT P 34 P 34 3 8 15 2 3 5 6 7 7 9 9 11 12 13 14 15 15 18 20 22 25 27 31 LCS_GDT F 35 F 35 3 8 15 3 3 4 6 7 7 9 9 11 12 13 14 15 15 15 20 22 22 23 25 LCS_GDT W 36 W 36 5 8 15 4 4 6 6 7 7 9 9 11 12 13 14 15 15 15 16 17 18 21 22 LCS_GDT I 37 I 37 5 8 15 4 4 6 6 7 7 9 9 11 12 13 14 15 15 15 15 17 18 19 20 LCS_GDT S 38 S 38 5 8 15 4 4 6 6 7 7 9 9 11 11 13 14 15 15 15 16 17 18 21 22 LCS_GDT S 39 S 39 5 8 15 4 4 6 6 7 7 9 9 11 12 13 14 15 15 15 15 17 18 19 20 LCS_GDT F 40 F 40 5 8 15 4 4 6 6 7 7 9 9 11 12 13 14 15 15 15 15 16 18 19 20 LCS_GDT I 41 I 41 5 8 15 4 4 6 6 7 7 9 9 11 12 13 14 15 15 15 15 17 18 19 20 LCS_GDT G 42 G 42 4 7 15 4 4 4 5 7 7 9 9 11 12 13 14 15 15 15 15 16 18 19 20 LCS_GDT R 43 R 43 4 6 15 4 4 4 5 6 6 7 9 11 12 13 14 15 15 15 15 16 18 19 20 LCS_GDT S 44 S 44 4 6 15 4 4 4 5 6 6 6 9 11 12 13 14 15 15 15 15 16 18 19 20 LCS_GDT K 45 K 45 3 6 15 0 3 4 5 6 6 6 6 7 8 9 10 15 15 15 15 16 16 17 20 LCS_AVERAGE LCS_A: 25.17 ( 14.82 18.60 42.10 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 10 10 10 10 11 11 13 16 16 18 20 21 23 26 27 29 31 31 31 GDT PERCENT_AT 15.91 22.73 22.73 22.73 22.73 25.00 25.00 29.55 36.36 36.36 40.91 45.45 47.73 52.27 59.09 61.36 65.91 70.45 70.45 70.45 GDT RMS_LOCAL 0.24 0.60 0.60 0.60 0.60 2.37 2.37 2.91 3.78 3.47 3.94 4.39 4.36 4.83 5.28 5.39 5.71 5.98 5.98 5.98 GDT RMS_ALL_AT 17.11 16.54 16.54 16.54 16.54 15.67 15.67 15.97 14.39 16.16 15.98 15.55 15.90 14.46 14.51 14.85 14.76 14.69 14.69 14.69 # Checking swapping # possible swapping detected: E 15 E 15 # possible swapping detected: E 27 E 27 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 4.423 0 0.682 0.638 5.251 3.182 6.182 - LGA V 3 V 3 4.185 0 0.650 0.935 6.577 4.545 2.597 5.712 LGA Q 4 Q 4 5.158 0 0.687 0.998 12.378 6.818 3.030 11.529 LGA G 5 G 5 1.251 0 0.384 0.384 3.681 41.364 41.364 - LGA P 6 P 6 2.269 0 0.053 0.084 4.834 33.182 21.558 4.708 LGA W 7 W 7 2.792 0 0.277 1.466 10.820 26.818 11.688 10.820 LGA V 8 V 8 5.109 0 0.098 1.186 8.272 2.727 1.558 5.139 LGA G 9 G 9 9.082 0 0.234 0.234 10.941 0.000 0.000 - LGA S 10 S 10 6.759 0 0.656 0.866 7.259 0.000 1.212 4.303 LGA S 11 S 11 10.181 0 0.036 0.727 14.343 0.000 0.000 14.343 LGA Y 12 Y 12 9.782 0 0.037 0.999 11.036 0.000 0.000 11.036 LGA V 13 V 13 6.480 0 0.012 0.033 8.465 0.000 0.000 8.151 LGA A 14 A 14 10.932 0 0.041 0.045 13.425 0.000 0.000 - LGA E 15 E 15 13.738 0 0.119 1.139 20.308 0.000 0.000 19.974 LGA T 16 T 16 9.980 0 0.116 0.119 10.797 0.000 0.000 7.521 LGA G 17 G 17 10.974 0 0.268 0.268 10.974 0.000 0.000 - LGA Q 18 Q 18 8.481 0 0.630 1.508 13.430 0.000 0.000 12.133 LGA N 19 N 19 2.494 0 0.064 0.861 4.966 24.091 22.727 4.966 LGA W 20 W 20 5.372 0 0.607 0.571 16.365 6.818 1.948 16.365 LGA A 21 A 21 2.300 0 0.031 0.036 3.410 46.818 47.636 - LGA S 22 S 22 2.130 0 0.024 0.616 3.483 44.545 37.273 2.752 LGA L 23 L 23 2.528 0 0.058 0.240 6.913 45.455 23.409 6.913 LGA A 24 A 24 2.958 0 0.014 0.021 4.001 27.727 23.273 - LGA A 25 A 25 2.814 0 0.020 0.027 4.216 22.273 25.455 - LGA N 26 N 26 3.081 0 0.035 0.083 4.204 20.000 16.818 4.142 LGA E 27 E 27 3.159 0 0.128 1.193 5.673 11.818 14.747 4.848 LGA L 28 L 28 5.848 0 0.193 0.935 8.717 0.455 0.227 8.717 LGA R 29 R 29 6.480 0 0.342 1.808 15.793 0.000 0.000 14.630 LGA V 30 V 30 10.983 0 0.622 0.573 14.949 0.000 0.000 14.949 LGA T 31 T 31 10.489 0 0.108 0.110 12.143 0.000 0.000 9.957 LGA E 32 E 32 12.329 0 0.293 1.439 14.329 0.000 0.000 10.748 LGA R 33 R 33 17.876 0 0.110 1.002 19.749 0.000 0.000 11.378 LGA P 34 P 34 23.033 0 0.716 0.622 25.481 0.000 0.000 25.089 LGA F 35 F 35 24.360 0 0.661 1.088 28.614 0.000 0.000 21.127 LGA W 36 W 36 30.198 0 0.642 1.369 40.239 0.000 0.000 40.239 LGA I 37 I 37 31.357 0 0.106 1.105 33.818 0.000 0.000 29.244 LGA S 38 S 38 31.688 0 0.136 0.661 31.888 0.000 0.000 30.626 LGA S 39 S 39 29.832 0 0.121 0.699 30.349 0.000 0.000 27.146 LGA F 40 F 40 31.612 0 0.057 1.031 34.607 0.000 0.000 34.607 LGA I 41 I 41 33.575 0 0.608 0.531 35.443 0.000 0.000 35.443 LGA G 42 G 42 30.671 0 0.140 0.140 31.518 0.000 0.000 - LGA R 43 R 43 24.515 0 0.071 1.201 26.928 0.000 0.000 21.686 LGA S 44 S 44 20.300 0 0.028 0.640 21.353 0.000 0.000 19.021 LGA K 45 K 45 16.984 0 0.052 1.406 22.087 0.000 0.000 22.087 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 12.394 12.366 13.343 8.378 6.880 1.247 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 13 2.91 34.091 29.310 0.432 LGA_LOCAL RMSD: 2.911 Number of atoms: 13 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 15.970 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 12.394 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.948511 * X + 0.258607 * Y + 0.182890 * Z + 14.870090 Y_new = -0.116268 * X + -0.821366 * Y + 0.558426 * Z + 38.609497 Z_new = 0.294632 * X + 0.508409 * Y + 0.809143 * Z + 16.935638 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -3.019622 -0.299071 0.560990 [DEG: -173.0116 -17.1355 32.1424 ] ZXZ: 2.825093 0.628104 0.525223 [DEG: 161.8659 35.9877 30.0931 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS004_5-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS004_5-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 13 2.91 29.310 12.39 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS004_5-D1 PFRMAT TS TARGET T0953s2 MODEL 5 PARENT 1qjw_A ATOM 7168 N ALA 2 7.616 36.419 10.429 1.00 2.14 N ATOM 7169 CA ALA 2 8.563 37.118 9.546 1.00 2.14 C ATOM 7170 C ALA 2 8.813 36.499 8.161 1.00 2.14 C ATOM 7171 O ALA 2 9.175 37.189 7.210 1.00 2.14 O ATOM 7172 CB ALA 2 9.896 37.264 10.297 1.00 2.14 C ATOM 7173 N VAL 3 8.581 35.202 8.026 1.00 1.92 N ATOM 7174 CA VAL 3 8.716 34.524 6.737 1.00 1.92 C ATOM 7175 C VAL 3 7.745 35.056 5.676 1.00 1.92 C ATOM 7176 O VAL 3 8.032 34.982 4.482 1.00 1.92 O ATOM 7177 CB VAL 3 8.560 32.988 6.919 1.00 1.92 C ATOM 7178 CG1 VAL 3 9.692 32.446 7.808 1.00 1.92 C ATOM 7179 CG2 VAL 3 7.197 32.608 7.553 1.00 1.92 C ATOM 7180 N GLN 4 6.642 35.663 6.102 1.00 2.31 N ATOM 7181 CA GLN 4 5.620 36.181 5.190 1.00 2.31 C ATOM 7182 C GLN 4 6.053 37.451 4.455 1.00 2.31 C ATOM 7183 O GLN 4 5.359 37.922 3.555 1.00 2.31 O ATOM 7184 CB GLN 4 4.309 36.437 5.941 1.00 2.31 C ATOM 7185 CG GLN 4 3.679 35.185 6.561 1.00 2.31 C ATOM 7186 CD GLN 4 3.362 34.109 5.540 1.00 2.31 C ATOM 7187 OE1 GLN 4 2.945 34.377 4.422 1.00 2.31 O ATOM 7188 NE2 GLN 4 3.553 32.875 5.918 1.00 2.31 N ATOM 7189 N GLY 5 7.224 37.971 4.789 1.00 2.52 N ATOM 7190 CA GLY 5 7.837 39.000 3.969 1.00 2.52 C ATOM 7191 C GLY 5 8.616 38.387 2.817 1.00 2.52 C ATOM 7192 O GLY 5 8.046 38.122 1.752 1.00 2.52 O ATOM 7193 N PRO 6 9.923 38.123 2.977 1.00 3.18 N ATOM 7194 CA PRO 6 10.706 37.735 1.796 1.00 3.18 C ATOM 7195 C PRO 6 10.607 36.283 1.320 1.00 3.18 C ATOM 7196 O PRO 6 11.105 35.971 0.235 1.00 3.18 O ATOM 7197 CB PRO 6 12.135 38.036 2.254 1.00 3.18 C ATOM 7198 CG PRO 6 12.114 37.715 3.696 1.00 3.18 C ATOM 7199 CD PRO 6 10.785 38.249 4.169 1.00 3.18 C ATOM 7200 N TRP 7 10.016 35.375 2.092 1.00 2.86 N ATOM 7201 CA TRP 7 10.108 33.944 1.777 1.00 2.86 C ATOM 7202 C TRP 7 8.824 33.319 1.223 1.00 2.86 C ATOM 7203 O TRP 7 8.730 32.107 1.060 1.00 2.86 O ATOM 7204 CB TRP 7 10.619 33.175 3.004 1.00 2.86 C ATOM 7205 CG TRP 7 11.317 31.867 2.665 1.00 2.86 C ATOM 7206 CD1 TRP 7 11.821 31.480 1.455 1.00 2.86 C ATOM 7207 CD2 TRP 7 11.570 30.757 3.547 1.00 2.86 C ATOM 7208 NE1 TRP 7 12.341 30.218 1.504 1.00 2.86 N ATOM 7209 CE2 TRP 7 12.212 29.742 2.780 1.00 2.86 C ATOM 7210 CE3 TRP 7 11.306 30.510 4.908 1.00 2.86 C ATOM 7211 CZ2 TRP 7 12.594 28.504 3.337 1.00 2.86 C ATOM 7212 CZ3 TRP 7 11.673 29.260 5.470 1.00 2.86 C ATOM 7213 CH2 TRP 7 12.317 28.271 4.673 1.00 2.86 C ATOM 7214 N VAL 8 7.851 34.139 0.846 1.00 2.41 N ATOM 7215 CA VAL 8 6.592 33.637 0.268 1.00 2.41 C ATOM 7216 C VAL 8 6.754 32.954 -1.092 1.00 2.41 C ATOM 7217 O VAL 8 5.841 32.295 -1.574 1.00 2.41 O ATOM 7218 CB VAL 8 5.523 34.756 0.156 1.00 2.41 C ATOM 7219 CG1 VAL 8 5.132 35.259 1.540 1.00 2.41 C ATOM 7220 CG2 VAL 8 6.016 35.931 -0.699 1.00 2.41 C ATOM 7221 N GLY 9 7.935 33.035 -1.690 1.00 1.61 N ATOM 7222 CA GLY 9 8.258 32.207 -2.842 1.00 1.61 C ATOM 7223 C GLY 9 8.336 30.721 -2.526 1.00 1.61 C ATOM 7224 O GLY 9 8.287 29.884 -3.430 1.00 1.61 O ATOM 7225 N SER 10 8.424 30.352 -1.256 1.00 1.08 N ATOM 7226 CA SER 10 8.305 28.951 -0.863 1.00 1.08 C ATOM 7227 C SER 10 6.819 28.669 -0.685 1.00 1.08 C ATOM 7228 O SER 10 6.135 29.400 0.028 1.00 1.08 O ATOM 7229 CB SER 10 9.036 28.682 0.451 1.00 1.08 C ATOM 7230 OG SER 10 8.899 27.321 0.822 1.00 1.08 O ATOM 7231 N SER 11 6.311 27.606 -1.293 1.00 0.99 N ATOM 7232 CA SER 11 4.893 27.260 -1.160 1.00 0.99 C ATOM 7233 C SER 11 4.522 26.968 0.288 1.00 0.99 C ATOM 7234 O SER 11 3.444 27.318 0.738 1.00 0.99 O ATOM 7235 CB SER 11 4.566 26.039 -2.011 1.00 0.99 C ATOM 7236 OG SER 11 5.090 26.201 -3.319 1.00 0.99 O ATOM 7237 N TYR 12 5.455 26.409 1.046 1.00 1.20 N ATOM 7238 CA TYR 12 5.263 26.186 2.478 1.00 1.20 C ATOM 7239 C TYR 12 4.942 27.479 3.217 1.00 1.20 C ATOM 7240 O TYR 12 4.119 27.499 4.123 1.00 1.20 O ATOM 7241 CB TYR 12 6.544 25.587 3.061 1.00 1.20 C ATOM 7242 CG TYR 12 6.589 25.569 4.573 1.00 1.20 C ATOM 7243 CD1 TYR 12 5.813 24.656 5.315 1.00 1.20 C ATOM 7244 CD2 TYR 12 7.409 26.482 5.270 1.00 1.20 C ATOM 7245 CE1 TYR 12 5.866 24.650 6.737 1.00 1.20 C ATOM 7246 CE2 TYR 12 7.471 26.467 6.686 1.00 1.20 C ATOM 7247 CZ TYR 12 6.707 25.543 7.405 1.00 1.20 C ATOM 7248 OH TYR 12 6.798 25.509 8.774 1.00 1.20 O ATOM 7249 N VAL 13 5.560 28.578 2.820 1.00 1.26 N ATOM 7250 CA VAL 13 5.308 29.855 3.471 1.00 1.26 C ATOM 7251 C VAL 13 4.020 30.452 2.917 1.00 1.26 C ATOM 7252 O VAL 13 3.177 30.929 3.677 1.00 1.26 O ATOM 7253 CB VAL 13 6.508 30.804 3.252 1.00 1.26 C ATOM 7254 CG1 VAL 13 6.257 32.174 3.850 1.00 1.26 C ATOM 7255 CG2 VAL 13 7.780 30.199 3.872 1.00 1.26 C ATOM 7256 N ALA 14 3.838 30.398 1.605 1.00 1.22 N ATOM 7257 CA ALA 14 2.664 31.004 0.986 1.00 1.22 C ATOM 7258 C ALA 14 1.359 30.381 1.482 1.00 1.22 C ATOM 7259 O ALA 14 0.429 31.081 1.885 1.00 1.22 O ATOM 7260 CB ALA 14 2.756 30.880 -0.533 1.00 1.22 C ATOM 7261 N GLU 15 1.297 29.059 1.474 1.00 0.86 N ATOM 7262 CA GLU 15 0.072 28.327 1.790 1.00 0.86 C ATOM 7263 C GLU 15 -0.262 28.358 3.271 1.00 0.86 C ATOM 7264 O GLU 15 -1.378 28.034 3.668 1.00 0.86 O ATOM 7265 CB GLU 15 0.195 26.875 1.335 1.00 0.86 C ATOM 7266 CG GLU 15 0.340 26.741 -0.172 1.00 0.86 C ATOM 7267 CD GLU 15 0.344 25.298 -0.629 1.00 0.86 C ATOM 7268 OE1 GLU 15 0.836 24.398 0.087 1.00 0.86 O ATOM 7269 OE2 GLU 15 -0.181 25.042 -1.734 1.00 0.86 O ATOM 7270 N THR 16 0.671 28.814 4.091 1.00 0.76 N ATOM 7271 CA THR 16 0.422 28.974 5.519 1.00 0.76 C ATOM 7272 C THR 16 0.242 30.438 5.898 1.00 0.76 C ATOM 7273 O THR 16 0.125 30.739 7.073 1.00 0.76 O ATOM 7274 CB THR 16 1.554 28.358 6.365 1.00 0.76 C ATOM 7275 OG1 THR 16 2.806 28.924 5.977 1.00 0.76 O ATOM 7276 CG2 THR 16 1.649 26.856 6.157 1.00 0.76 C ATOM 7277 N GLY 17 0.168 31.358 4.945 1.00 0.46 N ATOM 7278 CA GLY 17 0.007 32.767 5.291 1.00 0.46 C ATOM 7279 C GLY 17 -1.248 33.114 6.075 1.00 0.46 C ATOM 7280 O GLY 17 -1.183 33.791 7.104 1.00 0.46 O ATOM 7281 N GLN 18 -2.392 32.588 5.659 1.00 0.40 N ATOM 7282 CA GLN 18 -3.642 32.801 6.392 1.00 0.40 C ATOM 7283 C GLN 18 -3.577 32.065 7.724 1.00 0.40 C ATOM 7284 O GLN 18 -4.113 32.508 8.739 1.00 0.40 O ATOM 7285 CB GLN 18 -4.827 32.273 5.571 1.00 0.40 C ATOM 7286 CG GLN 18 -6.201 32.623 6.146 1.00 0.40 C ATOM 7287 CD GLN 18 -7.342 32.076 5.316 1.00 0.40 C ATOM 7288 OE1 GLN 18 -7.183 31.700 4.156 1.00 0.40 O ATOM 7289 NE2 GLN 18 -8.511 32.035 5.892 1.00 0.40 N ATOM 7290 N ASN 19 -2.884 30.935 7.733 1.00 1.10 N ATOM 7291 CA ASN 19 -2.801 30.131 8.949 1.00 1.10 C ATOM 7292 C ASN 19 -1.951 30.862 9.983 1.00 1.10 C ATOM 7293 O ASN 19 -2.310 30.889 11.152 1.00 1.10 O ATOM 7294 CB ASN 19 -2.223 28.734 8.682 1.00 1.10 C ATOM 7295 CG ASN 19 -3.122 27.869 7.824 1.00 1.10 C ATOM 7296 OD1 ASN 19 -4.258 28.218 7.501 1.00 1.10 O ATOM 7297 ND2 ASN 19 -2.628 26.727 7.449 1.00 1.10 N ATOM 7298 N TRP 20 -0.877 31.514 9.556 1.00 1.28 N ATOM 7299 CA TRP 20 -0.049 32.337 10.435 1.00 1.28 C ATOM 7300 C TRP 20 -0.822 33.535 10.968 1.00 1.28 C ATOM 7301 O TRP 20 -0.739 33.834 12.153 1.00 1.28 O ATOM 7302 CB TRP 20 1.173 32.876 9.688 1.00 1.28 C ATOM 7303 CG TRP 20 2.365 31.963 9.659 1.00 1.28 C ATOM 7304 CD1 TRP 20 2.838 31.253 8.602 1.00 1.28 C ATOM 7305 CD2 TRP 20 3.305 31.727 10.724 1.00 1.28 C ATOM 7306 NE1 TRP 20 4.026 30.643 8.896 1.00 1.28 N ATOM 7307 CE2 TRP 20 4.368 30.947 10.184 1.00 1.28 C ATOM 7308 CE3 TRP 20 3.361 32.096 12.085 1.00 1.28 C ATOM 7309 CZ2 TRP 20 5.496 30.579 10.945 1.00 1.28 C ATOM 7310 CZ3 TRP 20 4.483 31.709 12.862 1.00 1.28 C ATOM 7311 CH2 TRP 20 5.544 30.960 12.275 1.00 1.28 C ATOM 7312 N ALA 21 -1.591 34.199 10.115 1.00 1.22 N ATOM 7313 CA ALA 21 -2.386 35.352 10.543 1.00 1.22 C ATOM 7314 C ALA 21 -3.435 34.936 11.583 1.00 1.22 C ATOM 7315 O ALA 21 -3.735 35.646 12.546 1.00 1.22 O ATOM 7316 CB ALA 21 -3.052 35.985 9.314 1.00 1.22 C ATOM 7317 N SER 22 -3.985 33.744 11.407 1.00 0.24 N ATOM 7318 CA SER 22 -4.933 33.210 12.378 1.00 0.24 C ATOM 7319 C SER 22 -4.222 32.847 13.680 1.00 0.24 C ATOM 7320 O SER 22 -4.698 33.169 14.763 1.00 0.24 O ATOM 7321 CB SER 22 -5.644 31.991 11.794 1.00 0.24 C ATOM 7322 OG SER 22 -6.230 32.320 10.543 1.00 0.24 O ATOM 7323 N LEU 23 -3.061 32.213 13.576 1.00 0.42 N ATOM 7324 CA LEU 23 -2.292 31.809 14.751 1.00 0.42 C ATOM 7325 C LEU 23 -1.835 33.003 15.575 1.00 0.42 C ATOM 7326 O LEU 23 -1.964 32.970 16.787 1.00 0.42 O ATOM 7327 CB LEU 23 -1.047 31.005 14.350 1.00 0.42 C ATOM 7328 CG LEU 23 -1.206 29.528 13.952 1.00 0.42 C ATOM 7329 CD1 LEU 23 0.095 29.016 13.330 1.00 0.42 C ATOM 7330 CD2 LEU 23 -1.581 28.652 15.141 1.00 0.42 C ATOM 7331 N ALA 24 -1.298 34.044 14.954 1.00 0.70 N ATOM 7332 CA ALA 24 -0.783 35.186 15.709 1.00 0.70 C ATOM 7333 C ALA 24 -1.906 35.983 16.364 1.00 0.70 C ATOM 7334 O ALA 24 -1.763 36.465 17.492 1.00 0.70 O ATOM 7335 CB ALA 24 0.036 36.085 14.796 1.00 0.70 C ATOM 7336 N ALA 25 -3.032 36.118 15.678 1.00 0.74 N ATOM 7337 CA ALA 25 -4.165 36.800 16.282 1.00 0.74 C ATOM 7338 C ALA 25 -4.658 35.991 17.483 1.00 0.74 C ATOM 7339 O ALA 25 -4.888 36.545 18.555 1.00 0.74 O ATOM 7340 CB ALA 25 -5.275 37.001 15.255 1.00 0.74 C ATOM 7341 N ASN 26 -4.785 34.680 17.315 1.00 0.76 N ATOM 7342 CA ASN 26 -5.265 33.828 18.400 1.00 0.76 C ATOM 7343 C ASN 26 -4.295 33.825 19.573 1.00 0.76 C ATOM 7344 O ASN 26 -4.715 33.961 20.712 1.00 0.76 O ATOM 7345 CB ASN 26 -5.438 32.372 17.948 1.00 0.76 C ATOM 7346 CG ASN 26 -6.574 32.177 16.975 1.00 0.76 C ATOM 7347 OD1 ASN 26 -7.395 33.058 16.745 1.00 0.76 O ATOM 7348 ND2 ASN 26 -6.636 31.010 16.396 1.00 0.76 N ATOM 7349 N GLU 27 -3.008 33.662 19.303 1.00 1.05 N ATOM 7350 CA GLU 27 -1.998 33.537 20.355 1.00 1.05 C ATOM 7351 C GLU 27 -2.035 34.767 21.242 1.00 1.05 C ATOM 7352 O GLU 27 -2.097 34.672 22.468 1.00 1.05 O ATOM 7353 CB GLU 27 -0.597 33.392 19.733 1.00 1.05 C ATOM 7354 CG GLU 27 0.557 33.318 20.736 1.00 1.05 C ATOM 7355 CD GLU 27 1.926 33.180 20.072 1.00 1.05 C ATOM 7356 OE1 GLU 27 2.266 33.929 19.131 1.00 1.05 O ATOM 7357 OE2 GLU 27 2.714 32.308 20.515 1.00 1.05 O ATOM 7358 N LEU 28 -2.028 35.933 20.620 1.00 1.21 N ATOM 7359 CA LEU 28 -1.959 37.159 21.394 1.00 1.21 C ATOM 7360 C LEU 28 -3.295 37.514 22.037 1.00 1.21 C ATOM 7361 O LEU 28 -3.303 38.096 23.111 1.00 1.21 O ATOM 7362 CB LEU 28 -1.415 38.300 20.536 1.00 1.21 C ATOM 7363 CG LEU 28 0.108 38.463 20.357 1.00 1.21 C ATOM 7364 CD1 LEU 28 0.771 38.752 21.701 1.00 1.21 C ATOM 7365 CD2 LEU 28 0.837 37.301 19.690 1.00 1.21 C ATOM 7366 N ARG 29 -4.424 37.136 21.449 1.00 0.92 N ATOM 7367 CA ARG 29 -5.716 37.413 22.092 1.00 0.92 C ATOM 7368 C ARG 29 -5.964 36.484 23.283 1.00 0.92 C ATOM 7369 O ARG 29 -6.525 36.900 24.295 1.00 0.92 O ATOM 7370 CB ARG 29 -6.868 37.311 21.080 1.00 0.92 C ATOM 7371 CG ARG 29 -8.178 37.960 21.543 1.00 0.92 C ATOM 7372 CD ARG 29 -8.118 39.484 21.425 1.00 0.92 C ATOM 7373 NE ARG 29 -9.263 40.140 22.077 1.00 0.92 N ATOM 7374 CZ ARG 29 -9.485 41.447 22.126 1.00 0.92 C ATOM 7375 NH1 ARG 29 -10.468 41.882 22.859 1.00 0.92 N ATOM 7376 NH2 ARG 29 -8.824 42.336 21.432 1.00 0.92 N ATOM 7377 N VAL 30 -5.528 35.237 23.208 1.00 0.78 N ATOM 7378 CA VAL 30 -5.670 34.298 24.332 1.00 0.78 C ATOM 7379 C VAL 30 -4.749 34.729 25.476 1.00 0.78 C ATOM 7380 O VAL 30 -5.071 34.583 26.655 1.00 0.78 O ATOM 7381 CB VAL 30 -5.363 32.835 23.874 1.00 0.78 C ATOM 7382 CG1 VAL 30 -5.313 31.851 25.047 1.00 0.78 C ATOM 7383 CG2 VAL 30 -6.444 32.351 22.890 1.00 0.78 C ATOM 7384 N THR 31 -3.619 35.328 25.142 1.00 1.26 N ATOM 7385 CA THR 31 -2.689 35.805 26.162 1.00 1.26 C ATOM 7386 C THR 31 -2.880 37.275 26.530 1.00 1.26 C ATOM 7387 O THR 31 -2.076 37.820 27.286 1.00 1.26 O ATOM 7388 CB THR 31 -1.239 35.566 25.732 1.00 1.26 C ATOM 7389 OG1 THR 31 -0.995 36.187 24.470 1.00 1.26 O ATOM 7390 CG2 THR 31 -0.925 34.087 25.586 1.00 1.26 C ATOM 7391 N GLU 32 -3.953 37.900 26.061 1.00 1.71 N ATOM 7392 CA GLU 32 -4.293 39.292 26.385 1.00 1.71 C ATOM 7393 C GLU 32 -4.757 39.445 27.842 1.00 1.71 C ATOM 7394 O GLU 32 -5.948 39.523 28.155 1.00 1.71 O ATOM 7395 CB GLU 32 -5.371 39.793 25.414 1.00 1.71 C ATOM 7396 CG GLU 32 -5.673 41.273 25.525 1.00 1.71 C ATOM 7397 CD GLU 32 -6.698 41.734 24.513 1.00 1.71 C ATOM 7398 OE1 GLU 32 -6.397 41.776 23.307 1.00 1.71 O ATOM 7399 OE2 GLU 32 -7.806 42.135 24.930 1.00 1.71 O ATOM 7400 N ARG 33 -3.816 39.392 28.770 1.00 1.70 N ATOM 7401 CA ARG 33 -4.115 39.292 30.197 1.00 1.70 C ATOM 7402 C ARG 33 -3.222 40.310 30.911 1.00 1.70 C ATOM 7403 O ARG 33 -2.135 40.600 30.411 1.00 1.70 O ATOM 7404 CB ARG 33 -3.843 37.850 30.664 1.00 1.70 C ATOM 7405 CG ARG 33 -4.594 36.738 29.891 1.00 1.70 C ATOM 7406 CD ARG 33 -6.114 36.772 30.061 1.00 1.70 C ATOM 7407 NE ARG 33 -6.801 35.810 29.183 1.00 1.70 N ATOM 7408 CZ ARG 33 -7.462 36.082 28.062 1.00 1.70 C ATOM 7409 NH1 ARG 33 -8.096 35.124 27.454 1.00 1.70 N ATOM 7410 NH2 ARG 33 -7.555 37.265 27.521 1.00 1.70 N ATOM 7411 N PRO 34 -3.648 40.853 32.071 1.00 2.26 N ATOM 7412 CA PRO 34 -2.904 41.932 32.745 1.00 2.26 C ATOM 7413 C PRO 34 -1.482 41.682 33.244 1.00 2.26 C ATOM 7414 O PRO 34 -0.851 42.624 33.715 1.00 2.26 O ATOM 7415 CB PRO 34 -3.772 42.227 33.974 1.00 2.26 C ATOM 7416 CG PRO 34 -5.111 41.794 33.600 1.00 2.26 C ATOM 7417 CD PRO 34 -4.882 40.548 32.820 1.00 2.26 C ATOM 7418 N PHE 35 -1.004 40.441 33.208 1.00 2.07 N ATOM 7419 CA PHE 35 0.342 40.054 33.666 1.00 2.07 C ATOM 7420 C PHE 35 0.619 40.281 35.155 1.00 2.07 C ATOM 7421 O PHE 35 1.743 40.132 35.645 1.00 2.07 O ATOM 7422 CB PHE 35 1.423 40.703 32.794 1.00 2.07 C ATOM 7423 CG PHE 35 2.089 39.729 31.883 1.00 2.07 C ATOM 7424 CD1 PHE 35 1.689 39.636 30.542 1.00 2.07 C ATOM 7425 CD2 PHE 35 3.076 38.856 32.372 1.00 2.07 C ATOM 7426 CE1 PHE 35 2.249 38.664 29.688 1.00 2.07 C ATOM 7427 CE2 PHE 35 3.640 37.872 31.535 1.00 2.07 C ATOM 7428 CZ PHE 35 3.223 37.778 30.183 1.00 2.07 C ATOM 7429 N TRP 36 -0.456 40.540 35.887 1.00 1.68 N ATOM 7430 CA TRP 36 -0.425 40.788 37.325 1.00 1.68 C ATOM 7431 C TRP 36 0.172 39.607 38.079 1.00 1.68 C ATOM 7432 O TRP 36 0.788 39.788 39.118 1.00 1.68 O ATOM 7433 CB TRP 36 -1.864 41.051 37.787 1.00 1.68 C ATOM 7434 CG TRP 36 -2.089 40.914 39.264 1.00 1.68 C ATOM 7435 CD1 TRP 36 -1.989 41.881 40.213 1.00 1.68 C ATOM 7436 CD2 TRP 36 -2.444 39.715 39.977 1.00 1.68 C ATOM 7437 NE1 TRP 36 -2.281 41.392 41.457 1.00 1.68 N ATOM 7438 CE2 TRP 36 -2.560 40.059 41.351 1.00 1.68 C ATOM 7439 CE3 TRP 36 -2.648 38.373 39.594 1.00 1.68 C ATOM 7440 CZ2 TRP 36 -2.876 39.107 42.341 1.00 1.68 C ATOM 7441 CZ3 TRP 36 -2.948 37.410 40.589 1.00 1.68 C ATOM 7442 CH2 TRP 36 -3.067 37.794 41.955 1.00 1.68 C ATOM 7443 N ILE 37 0.048 38.403 37.537 1.00 0.87 N ATOM 7444 CA ILE 37 0.541 37.202 38.216 1.00 0.87 C ATOM 7445 C ILE 37 2.041 37.294 38.477 1.00 0.87 C ATOM 7446 O ILE 37 2.502 36.987 39.576 1.00 0.87 O ATOM 7447 CB ILE 37 0.264 35.911 37.392 1.00 0.87 C ATOM 7448 CG1 ILE 37 -1.235 35.794 37.062 1.00 0.87 C ATOM 7449 CG2 ILE 37 0.742 34.660 38.168 1.00 0.87 C ATOM 7450 CD1 ILE 37 -1.591 34.662 36.099 1.00 0.87 C ATOM 7451 N SER 38 2.821 37.755 37.509 1.00 0.84 N ATOM 7452 CA SER 38 4.262 37.819 37.722 1.00 0.84 C ATOM 7453 C SER 38 4.569 38.836 38.815 1.00 0.84 C ATOM 7454 O SER 38 5.362 38.563 39.709 1.00 0.84 O ATOM 7455 CB SER 38 4.993 38.177 36.432 1.00 0.84 C ATOM 7456 OG SER 38 4.787 37.177 35.444 1.00 0.84 O ATOM 7457 N SER 39 3.877 39.966 38.814 1.00 0.70 N ATOM 7458 CA SER 39 4.086 40.988 39.838 1.00 0.70 C ATOM 7459 C SER 39 3.620 40.546 41.227 1.00 0.70 C ATOM 7460 O SER 39 4.216 40.907 42.245 1.00 0.70 O ATOM 7461 CB SER 39 3.333 42.246 39.423 1.00 0.70 C ATOM 7462 OG SER 39 3.714 42.618 38.110 1.00 0.70 O ATOM 7463 N PHE 40 2.588 39.718 41.274 1.00 0.42 N ATOM 7464 CA PHE 40 2.085 39.139 42.515 1.00 0.42 C ATOM 7465 C PHE 40 3.074 38.137 43.108 1.00 0.42 C ATOM 7466 O PHE 40 3.272 38.099 44.323 1.00 0.42 O ATOM 7467 CB PHE 40 0.746 38.457 42.222 1.00 0.42 C ATOM 7468 CG PHE 40 0.115 37.794 43.414 1.00 0.42 C ATOM 7469 CD1 PHE 40 -0.181 38.527 44.578 1.00 0.42 C ATOM 7470 CD2 PHE 40 -0.214 36.427 43.363 1.00 0.42 C ATOM 7471 CE1 PHE 40 -0.787 37.898 45.695 1.00 0.42 C ATOM 7472 CE2 PHE 40 -0.842 35.791 44.462 1.00 0.42 C ATOM 7473 CZ PHE 40 -1.123 36.527 45.632 1.00 0.42 C ATOM 7474 N ILE 41 3.727 37.347 42.267 1.00 0.30 N ATOM 7475 CA ILE 41 4.767 36.423 42.734 1.00 0.30 C ATOM 7476 C ILE 41 6.008 37.239 43.124 1.00 0.30 C ATOM 7477 O ILE 41 6.732 36.885 44.054 1.00 0.30 O ATOM 7478 CB ILE 41 5.098 35.340 41.652 1.00 0.30 C ATOM 7479 CG1 ILE 41 3.848 34.476 41.379 1.00 0.30 C ATOM 7480 CG2 ILE 41 6.255 34.410 42.113 1.00 0.30 C ATOM 7481 CD1 ILE 41 3.927 33.567 40.142 1.00 0.30 C ATOM 7482 N GLY 42 6.216 38.373 42.468 1.00 0.72 N ATOM 7483 CA GLY 42 7.352 39.238 42.758 1.00 0.72 C ATOM 7484 C GLY 42 8.440 39.128 41.709 1.00 0.72 C ATOM 7485 O GLY 42 9.611 39.433 41.946 1.00 0.72 O ATOM 7486 N ARG 43 8.047 38.663 40.533 1.00 1.03 N ATOM 7487 CA ARG 43 8.916 38.521 39.363 1.00 1.03 C ATOM 7488 C ARG 43 8.743 39.776 38.535 1.00 1.03 C ATOM 7489 O ARG 43 7.747 40.480 38.700 1.00 1.03 O ATOM 7490 CB ARG 43 8.447 37.341 38.509 1.00 1.03 C ATOM 7491 CG ARG 43 8.592 36.013 39.199 1.00 1.03 C ATOM 7492 CD ARG 43 7.990 34.888 38.388 1.00 1.03 C ATOM 7493 NE ARG 43 8.142 33.630 39.128 1.00 1.03 N ATOM 7494 CZ ARG 43 7.534 32.483 38.870 1.00 1.03 C ATOM 7495 NH1 ARG 43 7.772 31.471 39.648 1.00 1.03 N ATOM 7496 NH2 ARG 43 6.653 32.316 37.920 1.00 1.03 N ATOM 7497 N SER 44 9.651 40.025 37.611 1.00 1.60 N ATOM 7498 CA SER 44 9.421 41.072 36.625 1.00 1.60 C ATOM 7499 C SER 44 8.293 40.574 35.732 1.00 1.60 C ATOM 7500 O SER 44 8.251 39.389 35.375 1.00 1.60 O ATOM 7501 CB SER 44 10.679 41.346 35.799 1.00 1.60 C ATOM 7502 OG SER 44 10.441 42.378 34.860 1.00 1.60 O ATOM 7503 N LYS 45 7.360 41.448 35.384 1.00 1.95 N ATOM 7504 CA LYS 45 6.306 41.070 34.440 1.00 1.95 C ATOM 7505 C LYS 45 6.841 41.513 33.086 1.00 1.95 C ATOM 7506 O LYS 45 7.409 42.597 32.972 1.00 1.95 O ATOM 7507 CB LYS 45 4.913 41.627 34.796 1.00 1.95 C ATOM 7508 CG LYS 45 4.533 43.029 34.314 1.00 1.95 C ATOM 7509 CD LYS 45 5.289 44.143 35.017 1.00 1.95 C ATOM 7510 CE LYS 45 5.040 45.502 34.396 1.00 1.95 C ATOM 7511 NZ LYS 45 5.690 45.632 33.048 1.00 1.95 N TER 8976 LEU A 249 END