####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS004_2-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS004_2-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 24 8 - 31 4.97 9.71 LCS_AVERAGE: 49.54 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 19 - 29 1.91 15.20 LCS_AVERAGE: 19.42 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 20 - 29 0.35 16.38 LCS_AVERAGE: 13.38 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 7 13 3 3 4 6 7 8 9 9 9 14 15 16 16 17 21 23 26 27 30 31 LCS_GDT V 3 V 3 3 8 13 3 3 4 6 7 8 9 9 11 14 15 17 19 21 23 26 29 30 32 34 LCS_GDT Q 4 Q 4 5 8 20 3 4 5 6 7 8 9 9 11 14 15 17 19 21 23 26 29 30 32 34 LCS_GDT G 5 G 5 5 8 22 2 4 5 6 7 8 9 11 13 14 16 19 20 22 25 26 29 32 32 35 LCS_GDT P 6 P 6 5 8 22 3 4 5 6 7 8 9 10 11 12 15 19 20 22 25 28 31 32 33 35 LCS_GDT W 7 W 7 5 8 22 3 4 5 6 7 8 9 10 11 12 13 19 21 25 28 29 31 33 34 35 LCS_GDT V 8 V 8 5 8 24 3 4 5 7 8 9 13 15 15 18 20 23 25 26 29 30 31 33 34 35 LCS_GDT G 9 G 9 4 8 24 4 4 5 7 9 11 13 15 15 18 20 23 25 27 29 30 32 33 34 35 LCS_GDT S 10 S 10 4 8 24 4 4 5 7 9 11 13 15 15 18 20 23 25 27 29 30 32 33 34 35 LCS_GDT S 11 S 11 4 7 24 4 4 5 7 9 11 13 15 15 18 20 23 25 27 29 30 32 33 34 35 LCS_GDT Y 12 Y 12 4 7 24 4 4 5 7 8 8 13 15 15 17 20 23 25 26 29 30 32 33 34 35 LCS_GDT V 13 V 13 4 8 24 3 4 6 7 9 11 13 15 15 18 20 23 25 27 29 30 32 33 34 35 LCS_GDT A 14 A 14 4 8 24 3 4 5 7 9 11 13 15 15 18 20 23 25 27 29 30 32 33 34 35 LCS_GDT E 15 E 15 6 8 24 3 5 6 7 9 11 13 15 15 18 20 23 25 27 29 30 32 33 34 35 LCS_GDT T 16 T 16 6 8 24 3 5 6 7 8 10 13 15 15 18 20 23 25 27 29 30 32 33 34 35 LCS_GDT G 17 G 17 6 8 24 3 5 6 7 9 11 13 15 15 18 20 23 25 27 29 30 32 33 34 35 LCS_GDT Q 18 Q 18 6 8 24 3 5 6 7 9 11 13 15 15 18 20 23 25 27 29 30 32 33 34 35 LCS_GDT N 19 N 19 6 11 24 3 5 6 7 8 11 13 15 15 18 20 23 25 27 29 30 32 33 34 35 LCS_GDT W 20 W 20 10 11 24 10 10 10 10 10 10 12 14 15 17 20 23 25 27 29 30 32 33 34 35 LCS_GDT A 21 A 21 10 11 24 10 10 10 10 10 11 13 15 15 18 20 23 25 27 29 30 32 33 34 35 LCS_GDT S 22 S 22 10 11 24 10 10 10 10 10 11 13 15 15 18 20 23 25 27 29 30 32 33 34 35 LCS_GDT L 23 L 23 10 11 24 10 10 10 10 10 11 13 15 15 18 20 23 25 27 29 30 32 33 34 35 LCS_GDT A 24 A 24 10 11 24 10 10 10 10 10 10 11 12 14 18 20 23 25 27 29 30 32 33 34 35 LCS_GDT A 25 A 25 10 11 24 10 10 10 10 10 10 11 14 15 18 20 23 25 27 29 30 32 33 34 35 LCS_GDT N 26 N 26 10 11 24 10 10 10 10 10 10 11 14 15 18 20 23 25 27 29 30 32 33 34 35 LCS_GDT E 27 E 27 10 11 24 10 10 10 10 10 10 11 11 12 14 16 18 21 24 28 29 32 33 34 35 LCS_GDT L 28 L 28 10 11 24 10 10 10 10 10 10 11 11 12 13 15 18 20 22 24 26 28 30 32 33 LCS_GDT R 29 R 29 10 11 24 10 10 10 10 10 10 11 12 14 15 17 20 22 24 28 29 32 33 34 35 LCS_GDT V 30 V 30 3 5 24 3 4 4 5 6 8 11 12 14 16 18 22 25 27 29 30 32 33 34 35 LCS_GDT T 31 T 31 3 5 24 3 4 4 5 6 8 11 12 14 18 20 23 25 27 29 30 32 33 34 35 LCS_GDT E 32 E 32 4 5 21 3 4 4 5 6 8 11 12 14 18 20 23 25 27 29 30 32 33 34 35 LCS_GDT R 33 R 33 4 5 21 3 4 4 5 6 7 10 10 12 14 15 17 19 24 28 30 32 33 34 35 LCS_GDT P 34 P 34 4 5 21 3 4 4 4 4 6 8 10 12 13 18 18 20 24 27 30 32 33 34 35 LCS_GDT F 35 F 35 4 9 21 3 4 4 5 7 8 11 12 14 16 19 22 25 27 29 30 32 33 34 35 LCS_GDT W 36 W 36 5 9 21 3 4 6 8 8 9 11 12 14 16 19 22 25 27 29 30 32 33 34 35 LCS_GDT I 37 I 37 6 9 21 3 5 6 8 8 9 11 11 11 14 15 17 21 23 24 28 31 33 34 34 LCS_GDT S 38 S 38 6 9 21 4 5 6 8 8 9 11 12 14 16 18 19 23 26 28 29 32 33 34 35 LCS_GDT S 39 S 39 6 9 19 4 5 6 8 8 9 11 13 15 18 20 23 25 27 29 30 32 33 34 35 LCS_GDT F 40 F 40 6 9 19 4 5 6 8 8 9 11 11 12 15 18 20 25 27 29 30 32 33 34 35 LCS_GDT I 41 I 41 6 9 19 4 5 6 8 8 9 11 12 14 16 19 22 25 27 29 30 32 33 34 35 LCS_GDT G 42 G 42 6 9 19 3 4 6 8 8 9 11 13 15 18 20 23 25 27 29 30 32 33 34 35 LCS_GDT R 43 R 43 4 9 16 3 4 6 8 8 9 11 11 11 13 16 19 25 27 29 30 31 33 34 35 LCS_GDT S 44 S 44 4 9 16 0 4 4 6 7 9 11 11 11 13 14 19 20 24 28 29 31 33 34 35 LCS_GDT K 45 K 45 3 7 16 0 3 3 6 6 8 11 11 11 13 14 14 18 20 22 26 27 30 32 32 LCS_AVERAGE LCS_A: 27.44 ( 13.38 19.42 49.54 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 10 10 10 10 11 13 15 15 18 20 23 25 27 29 30 32 33 34 35 GDT PERCENT_AT 22.73 22.73 22.73 22.73 22.73 25.00 29.55 34.09 34.09 40.91 45.45 52.27 56.82 61.36 65.91 68.18 72.73 75.00 77.27 79.55 GDT RMS_LOCAL 0.35 0.35 0.35 0.35 0.35 2.18 2.44 2.76 2.76 3.78 3.84 4.23 4.57 5.00 5.22 5.36 5.75 5.89 6.10 6.26 GDT RMS_ALL_AT 16.38 16.38 16.38 16.38 16.38 9.61 9.87 9.65 9.65 9.33 9.27 9.23 9.12 9.62 9.36 9.32 9.99 9.75 8.99 9.34 # Checking swapping # possible swapping detected: E 27 E 27 # possible swapping detected: E 32 E 32 # possible swapping detected: F 35 F 35 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 18.425 0 0.052 0.076 19.251 0.000 0.000 - LGA V 3 V 3 13.059 0 0.058 0.981 15.738 0.000 0.000 8.996 LGA Q 4 Q 4 13.854 0 0.691 0.525 16.042 0.000 0.000 14.457 LGA G 5 G 5 12.971 0 0.046 0.046 13.236 0.000 0.000 - LGA P 6 P 6 12.922 0 0.046 0.329 16.344 0.000 0.000 16.344 LGA W 7 W 7 9.873 0 0.387 1.067 16.751 0.000 0.000 15.546 LGA V 8 V 8 3.970 0 0.528 0.547 5.980 31.818 28.052 1.573 LGA G 9 G 9 2.708 0 0.384 0.384 3.284 38.636 38.636 - LGA S 10 S 10 3.325 0 0.116 0.647 4.467 34.545 25.758 3.918 LGA S 11 S 11 1.157 0 0.294 0.707 2.660 52.273 49.697 1.528 LGA Y 12 Y 12 3.570 0 0.032 0.608 9.523 21.818 7.273 9.523 LGA V 13 V 13 0.613 0 0.626 0.643 2.238 67.727 60.779 1.717 LGA A 14 A 14 2.967 0 0.598 0.595 5.606 42.273 33.818 - LGA E 15 E 15 3.108 0 0.080 1.466 4.649 23.182 24.040 2.745 LGA T 16 T 16 3.580 0 0.072 0.127 5.574 20.909 14.286 3.880 LGA G 17 G 17 1.022 0 0.159 0.159 1.737 74.545 74.545 - LGA Q 18 Q 18 1.570 0 0.078 0.187 2.355 48.182 48.485 1.858 LGA N 19 N 19 3.455 0 0.647 0.935 4.839 13.182 12.955 3.530 LGA W 20 W 20 5.530 0 0.648 0.464 16.853 6.364 1.818 16.853 LGA A 21 A 21 1.348 0 0.042 0.043 3.477 46.364 44.727 - LGA S 22 S 22 2.282 0 0.035 0.499 4.185 55.455 39.697 4.185 LGA L 23 L 23 3.429 0 0.071 0.084 9.021 17.727 8.864 9.021 LGA A 24 A 24 7.433 0 0.011 0.021 9.730 0.000 0.000 - LGA A 25 A 25 7.996 0 0.022 0.022 10.155 0.000 0.000 - LGA N 26 N 26 6.716 0 0.006 0.066 9.717 0.000 10.909 4.769 LGA E 27 E 27 11.252 0 0.055 1.149 14.787 0.000 0.000 12.186 LGA L 28 L 28 14.752 0 0.170 0.275 17.815 0.000 0.000 14.953 LGA R 29 R 29 14.066 0 0.202 1.264 19.626 0.000 0.000 19.515 LGA V 30 V 30 11.300 0 0.186 1.170 11.718 0.000 0.000 10.697 LGA T 31 T 31 9.496 0 0.702 0.569 12.515 0.000 0.000 10.074 LGA E 32 E 32 7.069 0 0.641 1.302 11.783 0.000 0.000 11.783 LGA R 33 R 33 9.639 0 0.583 1.072 17.833 0.000 0.000 16.929 LGA P 34 P 34 11.485 0 0.625 0.610 13.528 0.000 0.000 13.528 LGA F 35 F 35 8.683 0 0.571 1.334 10.688 0.000 0.000 7.957 LGA W 36 W 36 12.635 0 0.595 1.278 20.464 0.000 0.000 20.139 LGA I 37 I 37 16.941 0 0.085 1.029 21.777 0.000 0.000 21.777 LGA S 38 S 38 15.567 0 0.063 0.611 17.100 0.000 0.000 17.100 LGA S 39 S 39 8.604 0 0.098 0.207 11.069 0.000 0.000 7.263 LGA F 40 F 40 12.160 0 0.035 1.754 18.792 0.000 0.000 18.792 LGA I 41 I 41 13.709 0 0.623 1.255 19.520 0.000 0.000 19.520 LGA G 42 G 42 8.962 0 0.336 0.336 10.849 0.000 0.000 - LGA R 43 R 43 8.548 0 0.666 1.138 11.002 0.000 0.000 10.615 LGA S 44 S 44 9.063 0 0.235 0.248 10.134 0.000 0.000 7.329 LGA K 45 K 45 14.483 0 0.077 0.415 25.771 0.000 0.000 25.771 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 8.456 8.264 10.031 13.523 11.917 7.740 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 15 2.76 36.932 31.470 0.525 LGA_LOCAL RMSD: 2.758 Number of atoms: 15 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 9.651 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 8.456 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.981151 * X + 0.119729 * Y + 0.151682 * Z + 18.216198 Y_new = 0.100098 * X + -0.356530 * Y + 0.928906 * Z + 41.285667 Z_new = 0.165296 * X + 0.926581 * Y + 0.337825 * Z + 3.751005 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 3.039923 -0.166058 1.221181 [DEG: 174.1748 -9.5144 69.9685 ] ZXZ: 2.979730 1.226192 0.176536 [DEG: 170.7260 70.2556 10.1148 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS004_2-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS004_2-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 15 2.76 31.470 8.46 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS004_2-D1 PFRMAT TS TARGET T0953s2 MODEL 2 PARENT 3dcl_E ATOM 1826 N ALA 2 4.474 39.306 -3.399 1.00 1.48 N ATOM 1827 CA ALA 2 3.906 37.993 -3.693 1.00 1.48 C ATOM 1828 C ALA 2 3.772 37.144 -2.429 1.00 1.48 C ATOM 1829 O ALA 2 4.623 37.216 -1.545 1.00 1.48 O ATOM 1830 CB ALA 2 4.799 37.281 -4.724 1.00 1.48 C ATOM 1831 N VAL 3 2.727 36.332 -2.362 1.00 1.53 N ATOM 1832 CA VAL 3 2.551 35.344 -1.294 1.00 1.53 C ATOM 1833 C VAL 3 1.935 34.110 -1.939 1.00 1.53 C ATOM 1834 O VAL 3 1.081 34.210 -2.821 1.00 1.53 O ATOM 1835 CB VAL 3 1.652 35.830 -0.110 1.00 1.53 C ATOM 1836 CG1 VAL 3 2.409 36.803 0.798 1.00 1.53 C ATOM 1837 CG2 VAL 3 0.352 36.492 -0.592 1.00 1.53 C ATOM 1838 N GLN 4 2.367 32.932 -1.525 1.00 1.78 N ATOM 1839 CA GLN 4 1.840 31.687 -2.080 1.00 1.78 C ATOM 1840 C GLN 4 0.450 31.342 -1.545 1.00 1.78 C ATOM 1841 O GLN 4 -0.243 30.499 -2.116 1.00 1.78 O ATOM 1842 CB GLN 4 2.807 30.549 -1.766 1.00 1.78 C ATOM 1843 CG GLN 4 4.156 30.686 -2.472 1.00 1.78 C ATOM 1844 CD GLN 4 5.125 29.603 -2.068 1.00 1.78 C ATOM 1845 OE1 GLN 4 4.795 28.701 -1.299 1.00 1.78 O ATOM 1846 NE2 GLN 4 6.327 29.678 -2.559 1.00 1.78 N ATOM 1847 N GLY 5 0.013 32.001 -0.480 1.00 1.59 N ATOM 1848 CA GLY 5 -1.314 31.759 0.053 1.00 1.59 C ATOM 1849 C GLY 5 -1.713 32.745 1.134 1.00 1.59 C ATOM 1850 O GLY 5 -0.893 33.591 1.516 1.00 1.59 O ATOM 1851 N PRO 6 -2.955 32.680 1.653 1.00 2.11 N ATOM 1852 CA PRO 6 -3.409 33.619 2.689 1.00 2.11 C ATOM 1853 C PRO 6 -2.757 33.490 4.058 1.00 2.11 C ATOM 1854 O PRO 6 -2.963 34.346 4.915 1.00 2.11 O ATOM 1855 CB PRO 6 -4.890 33.257 2.859 1.00 2.11 C ATOM 1856 CG PRO 6 -5.256 32.547 1.629 1.00 2.11 C ATOM 1857 CD PRO 6 -4.042 31.749 1.297 1.00 2.11 C ATOM 1858 N TRP 7 -2.012 32.422 4.309 1.00 2.23 N ATOM 1859 CA TRP 7 -1.411 32.221 5.626 1.00 2.23 C ATOM 1860 C TRP 7 -0.117 33.030 5.756 1.00 2.23 C ATOM 1861 O TRP 7 0.338 33.250 6.871 1.00 2.23 O ATOM 1862 CB TRP 7 -1.132 30.740 5.887 1.00 2.23 C ATOM 1863 CG TRP 7 -2.305 29.810 5.948 1.00 2.23 C ATOM 1864 CD1 TRP 7 -3.624 30.100 5.796 1.00 2.23 C ATOM 1865 CD2 TRP 7 -2.252 28.391 6.186 1.00 2.23 C ATOM 1866 NE1 TRP 7 -4.401 28.986 5.941 1.00 2.23 N ATOM 1867 CE2 TRP 7 -3.591 27.909 6.168 1.00 2.23 C ATOM 1868 CE3 TRP 7 -1.206 27.478 6.441 1.00 2.23 C ATOM 1869 CZ2 TRP 7 -3.908 26.551 6.385 1.00 2.23 C ATOM 1870 CZ3 TRP 7 -1.518 26.111 6.659 1.00 2.23 C ATOM 1871 CH2 TRP 7 -2.871 25.665 6.627 1.00 2.23 C ATOM 1872 N VAL 8 0.381 33.517 4.616 1.00 2.80 N ATOM 1873 CA VAL 8 1.431 34.551 4.458 1.00 2.80 C ATOM 1874 C VAL 8 2.915 34.131 4.456 1.00 2.80 C ATOM 1875 O VAL 8 3.613 34.119 5.471 1.00 2.80 O ATOM 1876 CB VAL 8 1.242 35.808 5.395 1.00 2.80 C ATOM 1877 CG1 VAL 8 2.233 36.935 5.047 1.00 2.80 C ATOM 1878 CG2 VAL 8 -0.191 36.373 5.283 1.00 2.80 C ATOM 1879 N GLY 9 3.434 33.921 3.254 1.00 2.54 N ATOM 1880 CA GLY 9 4.881 33.944 3.043 1.00 2.54 C ATOM 1881 C GLY 9 5.693 32.719 3.418 1.00 2.54 C ATOM 1882 O GLY 9 5.183 31.603 3.517 1.00 2.54 O ATOM 1883 N SER 10 6.977 32.936 3.680 1.00 2.43 N ATOM 1884 CA SER 10 7.806 31.930 4.353 1.00 2.43 C ATOM 1885 C SER 10 7.196 31.673 5.722 1.00 2.43 C ATOM 1886 O SER 10 7.033 30.540 6.136 1.00 2.43 O ATOM 1887 CB SER 10 9.240 32.439 4.536 1.00 2.43 C ATOM 1888 OG SER 10 10.010 31.620 5.403 1.00 2.43 O ATOM 1889 N SER 11 6.774 32.742 6.381 1.00 2.35 N ATOM 1890 CA SER 11 6.238 32.708 7.741 1.00 2.35 C ATOM 1891 C SER 11 4.857 32.089 7.913 1.00 2.35 C ATOM 1892 O SER 11 4.258 32.241 8.975 1.00 2.35 O ATOM 1893 CB SER 11 6.120 34.154 8.206 1.00 2.35 C ATOM 1894 OG SER 11 7.314 34.871 7.932 1.00 2.35 O ATOM 1895 N TYR 12 4.329 31.490 6.855 1.00 2.27 N ATOM 1896 CA TYR 12 2.918 31.136 6.769 1.00 2.27 C ATOM 1897 C TYR 12 2.439 30.149 7.816 1.00 2.27 C ATOM 1898 O TYR 12 1.310 30.229 8.294 1.00 2.27 O ATOM 1899 CB TYR 12 2.592 30.630 5.362 1.00 2.27 C ATOM 1900 CG TYR 12 2.948 29.188 5.050 1.00 2.27 C ATOM 1901 CD1 TYR 12 1.952 28.295 4.606 1.00 2.27 C ATOM 1902 CD2 TYR 12 4.269 28.706 5.169 1.00 2.27 C ATOM 1903 CE1 TYR 12 2.273 26.953 4.276 1.00 2.27 C ATOM 1904 CE2 TYR 12 4.585 27.363 4.851 1.00 2.27 C ATOM 1905 CZ TYR 12 3.588 26.504 4.396 1.00 2.27 C ATOM 1906 OH TYR 12 3.929 25.220 4.059 1.00 2.27 O ATOM 1907 N VAL 13 3.346 29.287 8.239 1.00 2.09 N ATOM 1908 CA VAL 13 3.154 28.488 9.432 1.00 2.09 C ATOM 1909 C VAL 13 4.356 28.922 10.250 1.00 2.09 C ATOM 1910 O VAL 13 5.504 28.778 9.826 1.00 2.09 O ATOM 1911 CB VAL 13 3.127 26.966 9.159 1.00 2.09 C ATOM 1912 CG1 VAL 13 2.884 26.204 10.459 1.00 2.09 C ATOM 1913 CG2 VAL 13 2.024 26.617 8.160 1.00 2.09 C ATOM 1914 N ALA 14 4.082 29.533 11.388 1.00 1.90 N ATOM 1915 CA ALA 14 5.124 30.029 12.264 1.00 1.90 C ATOM 1916 C ALA 14 5.849 28.843 12.905 1.00 1.90 C ATOM 1917 O ALA 14 5.388 27.703 12.836 1.00 1.90 O ATOM 1918 CB ALA 14 4.482 30.928 13.322 1.00 1.90 C ATOM 1919 N GLU 15 6.937 29.109 13.607 1.00 1.66 N ATOM 1920 CA GLU 15 7.669 28.101 14.373 1.00 1.66 C ATOM 1921 C GLU 15 6.827 27.487 15.497 1.00 1.66 C ATOM 1922 O GLU 15 7.105 26.385 15.953 1.00 1.66 O ATOM 1923 CB GLU 15 8.968 28.697 14.938 1.00 1.66 C ATOM 1924 CG GLU 15 8.836 29.692 16.105 1.00 1.66 C ATOM 1925 CD GLU 15 8.210 31.034 15.737 1.00 1.66 C ATOM 1926 OE1 GLU 15 8.965 31.994 15.464 1.00 1.66 O ATOM 1927 OE2 GLU 15 6.966 31.170 15.776 1.00 1.66 O ATOM 1928 N THR 16 5.763 28.168 15.903 1.00 1.13 N ATOM 1929 CA THR 16 4.787 27.638 16.864 1.00 1.13 C ATOM 1930 C THR 16 3.729 26.743 16.210 1.00 1.13 C ATOM 1931 O THR 16 2.872 26.167 16.889 1.00 1.13 O ATOM 1932 CB THR 16 4.036 28.806 17.527 1.00 1.13 C ATOM 1933 OG1 THR 16 3.522 29.655 16.496 1.00 1.13 O ATOM 1934 CG2 THR 16 4.955 29.645 18.399 1.00 1.13 C ATOM 1935 N GLY 17 3.770 26.625 14.889 1.00 0.85 N ATOM 1936 CA GLY 17 2.810 25.804 14.169 1.00 0.85 C ATOM 1937 C GLY 17 1.454 26.465 14.017 1.00 0.85 C ATOM 1938 O GLY 17 0.416 25.805 14.047 1.00 0.85 O ATOM 1939 N GLN 18 1.455 27.785 13.905 1.00 1.16 N ATOM 1940 CA GLN 18 0.230 28.586 13.876 1.00 1.16 C ATOM 1941 C GLN 18 0.266 29.508 12.662 1.00 1.16 C ATOM 1942 O GLN 18 1.355 29.831 12.199 1.00 1.16 O ATOM 1943 CB GLN 18 0.144 29.397 15.172 1.00 1.16 C ATOM 1944 CG GLN 18 0.076 28.560 16.451 1.00 1.16 C ATOM 1945 CD GLN 18 -1.167 27.697 16.530 1.00 1.16 C ATOM 1946 OE1 GLN 18 -2.270 28.150 16.236 1.00 1.16 O ATOM 1947 NE2 GLN 18 -1.014 26.465 16.940 1.00 1.16 N ATOM 1948 N ASN 19 -0.889 29.902 12.135 1.00 1.62 N ATOM 1949 CA ASN 19 -0.950 30.618 10.853 1.00 1.62 C ATOM 1950 C ASN 19 -1.383 32.075 11.030 1.00 1.62 C ATOM 1951 O ASN 19 -2.209 32.367 11.901 1.00 1.62 O ATOM 1952 CB ASN 19 -1.980 29.974 9.913 1.00 1.62 C ATOM 1953 CG ASN 19 -1.847 28.474 9.791 1.00 1.62 C ATOM 1954 OD1 ASN 19 -0.809 27.861 10.003 1.00 1.62 O ATOM 1955 ND2 ASN 19 -2.948 27.853 9.476 1.00 1.62 N ATOM 1956 N TRP 20 -0.932 32.989 10.180 1.00 1.64 N ATOM 1957 CA TRP 20 -1.368 34.390 10.287 1.00 1.64 C ATOM 1958 C TRP 20 -2.824 34.602 9.901 1.00 1.64 C ATOM 1959 O TRP 20 -3.465 35.529 10.389 1.00 1.64 O ATOM 1960 CB TRP 20 -0.514 35.312 9.418 1.00 1.64 C ATOM 1961 CG TRP 20 0.908 35.311 9.850 1.00 1.64 C ATOM 1962 CD1 TRP 20 1.888 34.470 9.437 1.00 1.64 C ATOM 1963 CD2 TRP 20 1.525 36.177 10.818 1.00 1.64 C ATOM 1964 NE1 TRP 20 3.056 34.702 10.102 1.00 1.64 N ATOM 1965 CE2 TRP 20 2.885 35.770 10.939 1.00 1.64 C ATOM 1966 CE3 TRP 20 1.077 37.282 11.574 1.00 1.64 C ATOM 1967 CZ2 TRP 20 3.799 36.437 11.780 1.00 1.64 C ATOM 1968 CZ3 TRP 20 1.994 37.956 12.424 1.00 1.64 C ATOM 1969 CH2 TRP 20 3.349 37.523 12.511 1.00 1.64 C ATOM 1970 N ALA 21 -3.367 33.733 9.059 1.00 1.46 N ATOM 1971 CA ALA 21 -4.770 33.850 8.666 1.00 1.46 C ATOM 1972 C ALA 21 -5.681 33.717 9.892 1.00 1.46 C ATOM 1973 O ALA 21 -6.665 34.443 10.035 1.00 1.46 O ATOM 1974 CB ALA 21 -5.111 32.791 7.616 1.00 1.46 C ATOM 1975 N SER 22 -5.326 32.820 10.800 1.00 0.99 N ATOM 1976 CA SER 22 -6.090 32.626 12.024 1.00 0.99 C ATOM 1977 C SER 22 -5.936 33.805 12.974 1.00 0.99 C ATOM 1978 O SER 22 -6.874 34.168 13.678 1.00 0.99 O ATOM 1979 CB SER 22 -5.592 31.357 12.701 1.00 0.99 C ATOM 1980 OG SER 22 -5.006 30.525 11.712 1.00 0.99 O ATOM 1981 N LEU 23 -4.767 34.433 12.976 1.00 0.62 N ATOM 1982 CA LEU 23 -4.557 35.608 13.820 1.00 0.62 C ATOM 1983 C LEU 23 -5.413 36.758 13.327 1.00 0.62 C ATOM 1984 O LEU 23 -6.078 37.408 14.117 1.00 0.62 O ATOM 1985 CB LEU 23 -3.091 36.055 13.845 1.00 0.62 C ATOM 1986 CG LEU 23 -2.077 35.098 14.485 1.00 0.62 C ATOM 1987 CD1 LEU 23 -0.669 35.661 14.376 1.00 0.62 C ATOM 1988 CD2 LEU 23 -2.415 34.807 15.951 1.00 0.62 C ATOM 1989 N ALA 24 -5.447 36.981 12.023 1.00 0.34 N ATOM 1990 CA ALA 24 -6.270 38.053 11.479 1.00 0.34 C ATOM 1991 C ALA 24 -7.759 37.779 11.711 1.00 0.34 C ATOM 1992 O ALA 24 -8.532 38.691 11.995 1.00 0.34 O ATOM 1993 CB ALA 24 -5.969 38.223 10.002 1.00 0.34 C ATOM 1994 N ALA 25 -8.161 36.518 11.639 1.00 0.23 N ATOM 1995 CA ALA 25 -9.546 36.159 11.926 1.00 0.23 C ATOM 1996 C ALA 25 -9.868 36.451 13.396 1.00 0.23 C ATOM 1997 O ALA 25 -10.935 36.976 13.704 1.00 0.23 O ATOM 1998 CB ALA 25 -9.791 34.684 11.594 1.00 0.23 C ATOM 1999 N ASN 26 -8.942 36.136 14.294 1.00 0.68 N ATOM 2000 CA ASN 26 -9.114 36.410 15.723 1.00 0.68 C ATOM 2001 C ASN 26 -9.197 37.906 15.998 1.00 0.68 C ATOM 2002 O ASN 26 -10.004 38.349 16.810 1.00 0.68 O ATOM 2003 CB ASN 26 -7.943 35.844 16.534 1.00 0.68 C ATOM 2004 CG ASN 26 -7.965 34.342 16.627 1.00 0.68 C ATOM 2005 OD1 ASN 26 -8.991 33.701 16.410 1.00 0.68 O ATOM 2006 ND2 ASN 26 -6.857 33.765 16.993 1.00 0.68 N ATOM 2007 N GLU 27 -8.372 38.678 15.310 1.00 0.47 N ATOM 2008 CA GLU 27 -8.358 40.135 15.432 1.00 0.47 C ATOM 2009 C GLU 27 -9.647 40.760 14.898 1.00 0.47 C ATOM 2010 O GLU 27 -10.149 41.734 15.442 1.00 0.47 O ATOM 2011 CB GLU 27 -7.140 40.672 14.680 1.00 0.47 C ATOM 2012 CG GLU 27 -5.839 40.447 15.447 1.00 0.47 C ATOM 2013 CD GLU 27 -4.588 40.805 14.655 1.00 0.47 C ATOM 2014 OE1 GLU 27 -4.536 40.644 13.417 1.00 0.47 O ATOM 2015 OE2 GLU 27 -3.584 41.195 15.294 1.00 0.47 O ATOM 2016 N LEU 28 -10.249 40.163 13.880 1.00 0.51 N ATOM 2017 CA LEU 28 -11.552 40.630 13.403 1.00 0.51 C ATOM 2018 C LEU 28 -12.676 40.317 14.386 1.00 0.51 C ATOM 2019 O LEU 28 -13.688 41.021 14.431 1.00 0.51 O ATOM 2020 CB LEU 28 -11.885 39.981 12.059 1.00 0.51 C ATOM 2021 CG LEU 28 -11.199 40.557 10.817 1.00 0.51 C ATOM 2022 CD1 LEU 28 -11.405 39.624 9.636 1.00 0.51 C ATOM 2023 CD2 LEU 28 -11.748 41.936 10.479 1.00 0.51 C ATOM 2024 N ARG 29 -12.513 39.271 15.185 1.00 0.60 N ATOM 2025 CA ARG 29 -13.525 38.876 16.174 1.00 0.60 C ATOM 2026 C ARG 29 -13.529 39.766 17.410 1.00 0.60 C ATOM 2027 O ARG 29 -14.427 39.628 18.242 1.00 0.60 O ATOM 2028 CB ARG 29 -13.299 37.431 16.628 1.00 0.60 C ATOM 2029 CG ARG 29 -13.623 36.389 15.581 1.00 0.60 C ATOM 2030 CD ARG 29 -13.067 35.042 15.994 1.00 0.60 C ATOM 2031 NE ARG 29 -13.247 34.033 14.943 1.00 0.60 N ATOM 2032 CZ ARG 29 -12.788 32.790 14.963 1.00 0.60 C ATOM 2033 NH1 ARG 29 -13.029 32.026 13.941 1.00 0.60 N ATOM 2034 NH2 ARG 29 -12.095 32.275 15.944 1.00 0.60 N ATOM 2035 N VAL 30 -12.569 40.666 17.553 1.00 1.27 N ATOM 2036 CA VAL 30 -12.547 41.553 18.716 1.00 1.27 C ATOM 2037 C VAL 30 -12.930 42.954 18.264 1.00 1.27 C ATOM 2038 O VAL 30 -12.840 43.295 17.085 1.00 1.27 O ATOM 2039 CB VAL 30 -11.202 41.503 19.496 1.00 1.27 C ATOM 2040 CG1 VAL 30 -10.922 40.073 19.967 1.00 1.27 C ATOM 2041 CG2 VAL 30 -10.016 42.005 18.681 1.00 1.27 C ATOM 2042 N THR 31 -13.410 43.748 19.205 1.00 1.48 N ATOM 2043 CA THR 31 -13.816 45.122 18.957 1.00 1.48 C ATOM 2044 C THR 31 -12.591 46.001 18.707 1.00 1.48 C ATOM 2045 O THR 31 -11.464 45.588 18.971 1.00 1.48 O ATOM 2046 CB THR 31 -14.564 45.592 20.203 1.00 1.48 C ATOM 2047 OG1 THR 31 -14.101 44.796 21.297 1.00 1.48 O ATOM 2048 CG2 THR 31 -16.046 45.332 20.098 1.00 1.48 C ATOM 2049 N GLU 32 -12.785 47.211 18.200 1.00 1.21 N ATOM 2050 CA GLU 32 -11.648 48.067 17.846 1.00 1.21 C ATOM 2051 C GLU 32 -10.702 48.434 18.985 1.00 1.21 C ATOM 2052 O GLU 32 -9.495 48.460 18.778 1.00 1.21 O ATOM 2053 CB GLU 32 -12.112 49.367 17.189 1.00 1.21 C ATOM 2054 CG GLU 32 -12.846 49.157 15.884 1.00 1.21 C ATOM 2055 CD GLU 32 -12.825 50.402 15.020 1.00 1.21 C ATOM 2056 OE1 GLU 32 -13.370 51.456 15.422 1.00 1.21 O ATOM 2057 OE2 GLU 32 -12.262 50.336 13.903 1.00 1.21 O ATOM 2058 N ARG 33 -11.190 48.681 20.196 1.00 1.29 N ATOM 2059 CA ARG 33 -10.252 48.989 21.285 1.00 1.29 C ATOM 2060 C ARG 33 -9.366 47.775 21.587 1.00 1.29 C ATOM 2061 O ARG 33 -8.150 47.902 21.479 1.00 1.29 O ATOM 2062 CB ARG 33 -10.938 49.528 22.546 1.00 1.29 C ATOM 2063 CG ARG 33 -11.735 50.800 22.333 1.00 1.29 C ATOM 2064 CD ARG 33 -12.463 51.167 23.615 1.00 1.29 C ATOM 2065 NE ARG 33 -13.333 52.333 23.433 1.00 1.29 N ATOM 2066 CZ ARG 33 -14.583 52.328 22.988 1.00 1.29 C ATOM 2067 NH1 ARG 33 -15.246 53.443 22.998 1.00 1.29 N ATOM 2068 NH2 ARG 33 -15.183 51.277 22.493 1.00 1.29 N ATOM 2069 N PRO 34 -9.927 46.581 21.884 1.00 1.34 N ATOM 2070 CA PRO 34 -8.980 45.459 21.950 1.00 1.34 C ATOM 2071 C PRO 34 -8.149 45.171 20.704 1.00 1.34 C ATOM 2072 O PRO 34 -7.014 44.743 20.861 1.00 1.34 O ATOM 2073 CB PRO 34 -9.884 44.257 22.213 1.00 1.34 C ATOM 2074 CG PRO 34 -11.039 44.805 22.869 1.00 1.34 C ATOM 2075 CD PRO 34 -11.287 46.103 22.193 1.00 1.34 C ATOM 2076 N PHE 35 -8.642 45.412 19.494 1.00 1.23 N ATOM 2077 CA PHE 35 -7.819 45.238 18.292 1.00 1.23 C ATOM 2078 C PHE 35 -6.594 46.140 18.372 1.00 1.23 C ATOM 2079 O PHE 35 -5.462 45.692 18.168 1.00 1.23 O ATOM 2080 CB PHE 35 -8.610 45.592 17.024 1.00 1.23 C ATOM 2081 CG PHE 35 -7.771 45.599 15.772 1.00 1.23 C ATOM 2082 CD1 PHE 35 -7.621 44.436 15.004 1.00 1.23 C ATOM 2083 CD2 PHE 35 -7.106 46.775 15.366 1.00 1.23 C ATOM 2084 CE1 PHE 35 -6.768 44.422 13.866 1.00 1.23 C ATOM 2085 CE2 PHE 35 -6.239 46.775 14.247 1.00 1.23 C ATOM 2086 CZ PHE 35 -6.064 45.590 13.498 1.00 1.23 C ATOM 2087 N TRP 36 -6.801 47.408 18.691 1.00 0.77 N ATOM 2088 CA TRP 36 -5.687 48.338 18.784 1.00 0.77 C ATOM 2089 C TRP 36 -4.744 47.925 19.904 1.00 0.77 C ATOM 2090 O TRP 36 -3.545 47.866 19.705 1.00 0.77 O ATOM 2091 CB TRP 36 -6.183 49.764 19.012 1.00 0.77 C ATOM 2092 CG TRP 36 -5.049 50.736 18.984 1.00 0.77 C ATOM 2093 CD1 TRP 36 -4.477 51.295 17.885 1.00 0.77 C ATOM 2094 CD2 TRP 36 -4.270 51.201 20.102 1.00 0.77 C ATOM 2095 NE1 TRP 36 -3.417 52.090 18.225 1.00 0.77 N ATOM 2096 CE2 TRP 36 -3.268 52.068 19.584 1.00 0.77 C ATOM 2097 CE3 TRP 36 -4.303 50.957 21.491 1.00 0.77 C ATOM 2098 CZ2 TRP 36 -2.334 52.715 20.412 1.00 0.77 C ATOM 2099 CZ3 TRP 36 -3.342 51.583 22.325 1.00 0.77 C ATOM 2100 CH2 TRP 36 -2.375 52.467 21.773 1.00 0.77 C ATOM 2101 N ILE 37 -5.277 47.576 21.065 1.00 0.88 N ATOM 2102 CA ILE 37 -4.452 47.213 22.221 1.00 0.88 C ATOM 2103 C ILE 37 -3.614 45.969 21.904 1.00 0.88 C ATOM 2104 O ILE 37 -2.432 45.889 22.259 1.00 0.88 O ATOM 2105 CB ILE 37 -5.364 46.985 23.470 1.00 0.88 C ATOM 2106 CG1 ILE 37 -6.051 48.310 23.860 1.00 0.88 C ATOM 2107 CG2 ILE 37 -4.579 46.439 24.685 1.00 0.88 C ATOM 2108 CD1 ILE 37 -7.269 48.171 24.774 1.00 0.88 C ATOM 2109 N SER 38 -4.196 45.010 21.201 1.00 0.92 N ATOM 2110 CA SER 38 -3.493 43.772 20.876 1.00 0.92 C ATOM 2111 C SER 38 -2.456 43.957 19.777 1.00 0.92 C ATOM 2112 O SER 38 -1.431 43.292 19.784 1.00 0.92 O ATOM 2113 CB SER 38 -4.489 42.694 20.455 1.00 0.92 C ATOM 2114 OG SER 38 -5.531 42.597 21.413 1.00 0.92 O ATOM 2115 N SER 39 -2.685 44.870 18.845 1.00 1.14 N ATOM 2116 CA SER 39 -1.715 45.108 17.775 1.00 1.14 C ATOM 2117 C SER 39 -0.633 46.118 18.173 1.00 1.14 C ATOM 2118 O SER 39 0.499 46.048 17.691 1.00 1.14 O ATOM 2119 CB SER 39 -2.449 45.544 16.505 1.00 1.14 C ATOM 2120 OG SER 39 -3.259 46.686 16.737 1.00 1.14 O ATOM 2121 N PHE 40 -0.935 47.014 19.102 1.00 0.91 N ATOM 2122 CA PHE 40 0.026 48.005 19.602 1.00 0.91 C ATOM 2123 C PHE 40 1.161 47.369 20.407 1.00 0.91 C ATOM 2124 O PHE 40 2.244 47.942 20.535 1.00 0.91 O ATOM 2125 CB PHE 40 -0.716 49.043 20.455 1.00 0.91 C ATOM 2126 CG PHE 40 0.143 50.189 20.912 1.00 0.91 C ATOM 2127 CD1 PHE 40 0.539 51.188 20.007 1.00 0.91 C ATOM 2128 CD2 PHE 40 0.551 50.286 22.252 1.00 0.91 C ATOM 2129 CE1 PHE 40 1.345 52.276 20.430 1.00 0.91 C ATOM 2130 CE2 PHE 40 1.361 51.367 22.692 1.00 0.91 C ATOM 2131 CZ PHE 40 1.754 52.366 21.777 1.00 0.91 C ATOM 2132 N ILE 41 0.955 46.152 20.895 1.00 1.26 N ATOM 2133 CA ILE 41 2.011 45.433 21.614 1.00 1.26 C ATOM 2134 C ILE 41 3.142 45.013 20.656 1.00 1.26 C ATOM 2135 O ILE 41 4.259 44.688 21.074 1.00 1.26 O ATOM 2136 CB ILE 41 1.409 44.221 22.395 1.00 1.26 C ATOM 2137 CG1 ILE 41 2.234 43.924 23.660 1.00 1.26 C ATOM 2138 CG2 ILE 41 1.286 42.975 21.504 1.00 1.26 C ATOM 2139 CD1 ILE 41 1.601 42.923 24.640 1.00 1.26 C ATOM 2140 N GLY 42 2.866 45.069 19.357 1.00 1.26 N ATOM 2141 CA GLY 42 3.832 44.729 18.325 1.00 1.26 C ATOM 2142 C GLY 42 4.797 45.853 17.996 1.00 1.26 C ATOM 2143 O GLY 42 4.816 46.343 16.870 1.00 1.26 O ATOM 2144 N ARG 43 5.584 46.296 18.968 1.00 1.50 N ATOM 2145 CA ARG 43 6.491 47.439 18.776 1.00 1.50 C ATOM 2146 C ARG 43 7.593 47.194 17.753 1.00 1.50 C ATOM 2147 O ARG 43 8.125 48.152 17.191 1.00 1.50 O ATOM 2148 CB ARG 43 7.153 47.842 20.098 1.00 1.50 C ATOM 2149 CG ARG 43 6.181 48.353 21.146 1.00 1.50 C ATOM 2150 CD ARG 43 6.884 48.733 22.446 1.00 1.50 C ATOM 2151 NE ARG 43 5.876 49.176 23.414 1.00 1.50 N ATOM 2152 CZ ARG 43 6.037 49.411 24.707 1.00 1.50 C ATOM 2153 NH1 ARG 43 4.979 49.704 25.404 1.00 1.50 N ATOM 2154 NH2 ARG 43 7.172 49.317 25.340 1.00 1.50 N ATOM 2155 N SER 44 7.949 45.942 17.512 1.00 1.31 N ATOM 2156 CA SER 44 9.022 45.631 16.570 1.00 1.31 C ATOM 2157 C SER 44 8.578 45.758 15.111 1.00 1.31 C ATOM 2158 O SER 44 7.955 44.849 14.545 1.00 1.31 O ATOM 2159 CB SER 44 9.553 44.225 16.841 1.00 1.31 C ATOM 2160 OG SER 44 9.911 44.094 18.208 1.00 1.31 O ATOM 2161 N LYS 45 8.866 46.902 14.502 1.00 1.56 N ATOM 2162 CA LYS 45 8.533 47.136 13.094 1.00 1.56 C ATOM 2163 C LYS 45 9.527 46.445 12.166 1.00 1.56 C ATOM 2164 O LYS 45 10.743 46.535 12.360 1.00 1.56 O ATOM 2165 CB LYS 45 8.538 48.637 12.783 1.00 1.56 C ATOM 2166 CG LYS 45 7.986 48.963 11.397 1.00 1.56 C ATOM 2167 CD LYS 45 8.225 50.398 11.003 1.00 1.56 C ATOM 2168 CE LYS 45 7.649 50.642 9.614 1.00 1.56 C ATOM 2169 NZ LYS 45 7.979 52.026 9.175 1.00 1.56 N TER 3634 LEU A 249 END