####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 207 ( 207), selected 196 , name S0987TS312_3-D2 # Molecule2: number of CA atoms 196 ( 3036), selected 196 , name S0987-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap S0987TS312_3-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 25 268 - 292 4.91 34.99 LCS_AVERAGE: 8.68 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 277 - 288 1.60 35.90 LCS_AVERAGE: 3.14 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 6 316 - 321 1.00 43.58 LONGEST_CONTINUOUS_SEGMENT: 6 317 - 322 1.00 47.36 LCS_AVERAGE: 1.62 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 196 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT D 196 D 196 0 3 14 0 0 2 3 3 4 5 7 8 10 11 12 13 15 16 17 20 21 21 22 LCS_GDT F 197 F 197 3 3 15 0 3 3 3 3 4 5 7 9 9 11 12 13 15 16 17 18 21 21 22 LCS_GDT Y 198 Y 198 3 4 15 2 3 3 3 3 5 5 8 9 10 11 12 13 15 16 17 20 21 21 22 LCS_GDT N 199 N 199 3 6 15 2 3 4 4 6 7 8 9 9 10 14 14 15 16 16 17 20 21 21 24 LCS_GDT K 200 K 200 4 8 15 2 3 4 6 7 7 8 9 11 12 14 14 15 16 16 17 20 21 21 22 LCS_GDT L 201 L 201 4 8 15 2 3 4 6 7 7 8 9 11 12 14 14 15 16 16 17 20 21 21 22 LCS_GDT D 202 D 202 4 8 15 0 3 4 5 6 7 8 9 11 12 14 14 15 16 16 17 20 21 24 26 LCS_GDT V 203 V 203 4 8 15 1 3 4 5 7 7 8 9 11 12 14 14 15 16 18 19 23 23 24 27 LCS_GDT S 204 S 204 3 8 15 2 3 4 6 7 7 8 9 11 12 14 14 15 16 18 19 23 23 24 27 LCS_GDT E 205 E 205 3 8 15 2 3 3 6 7 7 9 10 11 12 14 15 15 17 18 20 23 23 25 27 LCS_GDT N 206 N 206 4 8 15 2 3 4 6 7 8 9 10 11 12 14 14 15 17 18 20 21 23 24 26 LCS_GDT N 207 N 207 4 8 15 1 3 4 6 7 8 9 10 11 12 14 15 15 17 18 20 22 23 25 26 LCS_GDT S 208 S 208 4 5 15 2 3 4 5 5 7 8 10 10 11 12 14 15 17 18 20 22 23 25 26 LCS_GDT D 209 D 209 4 5 15 1 2 4 5 6 8 9 10 11 12 14 14 15 16 18 20 22 23 25 26 LCS_GDT Q 210 Q 210 3 5 15 0 2 3 5 6 8 9 10 11 12 13 13 15 16 18 20 22 23 26 26 LCS_GDT F 211 F 211 3 5 15 2 3 3 5 6 8 9 10 11 12 13 15 16 18 19 20 23 25 26 27 LCS_GDT K 212 K 212 3 5 14 0 3 3 5 6 8 9 10 10 11 12 15 18 19 23 24 24 25 27 28 LCS_GDT H 213 H 213 3 6 13 2 3 3 5 7 8 9 12 15 15 19 19 22 22 23 24 24 25 27 28 LCS_GDT G 214 G 214 5 6 13 1 3 5 5 7 8 10 12 15 15 19 19 22 22 23 24 24 25 27 28 LCS_GDT S 215 S 215 5 6 13 1 3 5 5 6 8 10 12 15 15 19 19 22 22 23 24 24 25 27 28 LCS_GDT V 216 V 216 5 6 12 1 3 5 5 6 7 10 12 15 15 19 19 22 22 23 24 24 25 27 28 LCS_GDT N 217 N 217 5 6 10 0 3 5 5 6 7 10 12 15 15 19 19 22 22 23 24 24 25 27 28 LCS_GDT T 218 T 218 5 6 11 0 3 5 5 6 7 9 10 13 14 19 19 22 22 23 24 24 25 27 28 LCS_GDT K 219 K 219 0 4 12 0 1 3 3 6 7 7 7 8 10 12 13 16 19 21 22 24 25 27 28 LCS_GDT Y 220 Y 220 0 4 13 0 1 3 4 6 7 7 7 8 9 11 14 16 19 21 22 24 25 27 28 LCS_GDT E 221 E 221 3 5 13 0 3 3 4 6 7 7 7 9 10 11 14 16 19 21 22 24 25 27 28 LCS_GDT E 222 E 222 3 5 13 0 3 3 4 5 7 7 8 9 10 11 14 16 19 20 22 24 25 27 28 LCS_GDT A 223 A 223 3 5 13 1 3 3 4 6 7 8 9 10 10 11 14 16 17 21 22 24 25 27 28 LCS_GDT N 224 N 224 3 6 13 1 3 3 4 6 7 7 9 10 10 11 13 16 19 21 22 24 25 27 28 LCS_GDT I 225 I 225 5 6 13 2 4 5 5 5 6 8 9 10 10 11 14 16 19 21 22 24 25 27 28 LCS_GDT Q 226 Q 226 5 6 13 2 4 5 5 5 6 8 9 10 10 11 14 16 19 21 22 24 25 27 28 LCS_GDT T 227 T 227 5 6 17 2 4 5 5 5 6 8 9 11 11 14 19 22 22 23 24 24 25 27 28 LCS_GDT K 228 K 228 5 6 17 0 4 5 5 5 6 9 10 13 14 19 19 22 22 23 24 24 25 27 28 LCS_GDT D 229 D 229 5 6 17 2 4 5 5 6 8 9 11 15 15 19 19 22 22 23 24 24 25 27 28 LCS_GDT G 230 G 230 3 5 17 3 3 4 5 7 8 10 12 15 15 19 19 22 22 23 24 24 25 27 28 LCS_GDT S 231 S 231 3 5 17 3 3 4 5 7 8 10 12 15 15 19 19 22 22 23 24 24 25 27 28 LCS_GDT G 232 G 232 3 6 17 3 3 3 4 6 8 10 12 15 15 19 19 22 22 23 24 24 25 27 28 LCS_GDT S 233 S 233 3 6 17 2 3 3 4 7 8 10 12 15 15 19 19 22 22 23 24 24 25 27 28 LCS_GDT T 234 T 234 4 6 17 2 4 4 5 6 8 9 12 15 15 19 19 22 22 23 24 24 25 26 27 LCS_GDT G 235 G 235 4 6 17 1 4 4 5 6 8 8 9 14 15 18 19 22 22 23 24 24 25 26 26 LCS_GDT A 236 A 236 4 6 17 1 4 4 5 6 8 8 9 14 15 18 19 22 22 23 24 24 25 25 26 LCS_GDT N 237 N 237 4 6 17 0 4 4 5 6 8 9 10 14 15 19 19 22 22 23 24 24 25 25 26 LCS_GDT G 238 G 238 3 4 17 0 3 3 3 4 6 6 9 14 15 19 19 22 22 23 24 24 25 25 26 LCS_GDT A 239 A 239 3 4 17 0 1 3 3 4 6 9 12 15 15 19 19 22 22 23 24 24 25 25 26 LCS_GDT I 240 I 240 0 4 17 0 2 3 4 7 8 10 12 15 15 19 19 22 22 23 24 24 25 25 26 LCS_GDT I 241 I 241 0 4 17 0 2 3 4 7 8 10 12 15 15 19 19 22 22 23 24 24 25 26 27 LCS_GDT L 242 L 242 0 4 17 0 2 3 4 5 6 9 12 15 15 19 19 22 22 23 24 24 25 26 28 LCS_GDT D 243 D 243 0 5 17 0 2 3 5 5 5 6 7 9 12 16 17 19 21 23 24 24 25 27 28 LCS_GDT H 244 H 244 0 5 8 0 2 3 5 5 7 7 9 11 12 13 13 16 17 21 22 24 25 27 28 LCS_GDT K 245 K 245 0 5 8 0 1 3 5 5 7 8 8 9 11 14 14 16 17 21 21 24 25 27 28 LCS_GDT L 246 L 246 0 5 8 0 1 3 5 5 5 6 7 9 10 14 14 16 17 21 22 24 25 27 28 LCS_GDT T 247 T 247 0 5 8 1 2 3 5 5 5 5 7 8 9 9 11 16 17 21 21 24 25 26 27 LCS_GDT K 248 K 248 0 3 12 0 1 3 3 3 4 5 7 9 10 14 14 16 17 21 22 24 25 27 28 LCS_GDT E 249 E 249 0 5 15 0 1 3 3 4 7 8 8 9 10 14 15 15 17 18 20 23 23 24 27 LCS_GDT K 250 K 250 4 6 15 1 3 4 5 7 7 8 10 11 11 12 15 15 17 18 20 23 23 25 27 LCS_GDT N 251 N 251 4 6 15 2 3 4 5 7 7 8 10 11 11 12 15 15 17 18 20 23 23 25 28 LCS_GDT F 252 F 252 4 6 15 3 4 4 5 7 7 8 10 11 11 12 15 15 22 25 26 27 27 27 28 LCS_GDT S 253 S 253 4 6 15 3 4 4 5 6 7 8 10 11 17 19 21 22 23 25 26 27 27 27 28 LCS_GDT Y 254 Y 254 4 6 15 3 4 4 5 7 7 8 10 14 17 19 21 22 23 25 26 27 27 27 28 LCS_GDT S 255 S 255 4 6 15 3 4 4 5 7 8 9 13 15 17 19 21 22 23 25 26 27 27 27 28 LCS_GDT T 256 T 256 4 6 15 3 3 4 4 5 7 8 9 9 10 11 15 16 19 23 26 27 27 27 28 LCS_GDT S 257 S 257 4 6 15 1 1 4 5 7 8 10 13 15 17 19 21 22 23 25 26 27 27 27 28 LCS_GDT A 258 A 258 0 6 15 1 3 4 5 7 8 10 13 15 17 19 21 22 23 25 26 27 27 27 28 LCS_GDT K 259 K 259 0 6 15 1 2 4 4 6 8 10 13 15 16 19 21 22 23 25 26 27 27 27 28 LCS_GDT G 260 G 260 4 6 15 0 4 4 4 5 8 10 13 15 16 19 21 22 23 25 26 27 27 27 28 LCS_GDT T 261 T 261 4 6 15 3 4 4 5 7 8 10 13 15 17 19 21 22 23 25 26 27 27 27 28 LCS_GDT P 262 P 262 4 6 15 3 4 4 5 7 8 10 13 15 17 19 21 22 23 25 26 27 27 27 28 LCS_GDT W 263 W 263 4 6 16 3 4 4 4 6 8 10 13 15 17 19 21 22 23 25 26 27 27 27 28 LCS_GDT Y 264 Y 264 3 6 16 3 3 4 4 7 8 10 13 15 17 19 21 22 23 25 26 27 27 27 28 LCS_GDT A 265 A 265 3 4 16 3 3 4 4 4 4 6 7 9 11 17 21 22 23 25 26 27 27 27 28 LCS_GDT N 266 N 266 3 4 16 3 3 3 3 4 4 6 7 9 11 12 14 15 18 19 19 23 24 27 28 LCS_GDT Y 267 Y 267 3 4 16 2 3 3 4 4 6 9 10 10 11 12 14 15 18 19 19 22 25 27 28 LCS_GDT K 268 K 268 3 4 25 1 3 3 4 4 5 7 10 10 15 18 20 20 22 23 23 23 25 27 28 LCS_GDT I 269 I 269 3 5 25 2 3 3 4 5 6 9 10 10 11 12 14 20 22 23 23 23 25 27 28 LCS_GDT D 270 D 270 3 5 25 0 3 3 4 5 6 9 10 10 11 12 14 20 22 23 23 23 25 27 28 LCS_GDT E 271 E 271 3 5 25 3 3 3 4 5 11 13 17 18 18 19 20 20 22 23 23 23 25 27 28 LCS_GDT R 272 R 272 3 5 25 3 3 3 11 14 15 17 17 18 18 19 20 20 22 23 23 23 25 27 28 LCS_GDT L 273 L 273 3 5 25 3 3 3 6 10 14 17 17 18 18 19 20 20 22 23 23 23 25 27 28 LCS_GDT V 274 V 274 3 5 25 3 3 4 8 12 15 17 17 18 18 19 20 20 22 23 23 23 25 27 28 LCS_GDT P 275 P 275 3 6 25 3 3 4 4 5 7 9 10 10 14 18 19 20 20 22 22 23 25 26 26 LCS_GDT Y 276 Y 276 3 6 25 3 3 4 4 5 7 9 10 10 13 18 19 20 20 22 22 23 25 26 27 LCS_GDT V 277 V 277 5 12 25 3 5 7 10 14 15 17 17 18 18 19 20 20 22 23 23 23 25 27 28 LCS_GDT S 278 S 278 5 12 25 3 5 7 11 14 15 17 17 18 18 19 20 20 22 23 23 23 25 27 28 LCS_GDT G 279 G 279 5 12 25 3 6 7 11 14 15 17 17 18 18 19 20 20 22 23 23 23 25 27 28 LCS_GDT I 280 I 280 5 12 25 3 5 7 11 14 15 17 17 18 18 19 20 20 22 23 23 23 25 27 28 LCS_GDT Q 281 Q 281 5 12 25 3 6 7 11 14 15 17 17 18 18 19 20 20 22 23 23 23 25 27 28 LCS_GDT M 282 M 282 5 12 25 3 6 7 11 14 15 17 17 18 18 19 20 20 22 23 23 23 25 27 28 LCS_GDT H 283 H 283 5 12 25 2 6 7 11 14 15 17 17 18 18 19 20 20 22 23 23 23 25 27 28 LCS_GDT M 284 M 284 5 12 25 2 4 7 11 14 15 17 17 18 18 19 20 20 22 23 23 23 25 27 28 LCS_GDT V 285 V 285 5 12 25 2 6 7 11 14 15 17 17 18 18 19 20 20 22 23 23 23 25 27 28 LCS_GDT Q 286 Q 286 5 12 25 1 4 7 11 14 15 17 17 18 18 19 20 20 22 23 23 23 25 27 28 LCS_GDT A 287 A 287 4 12 25 1 6 7 11 14 15 17 17 18 18 19 20 20 22 23 23 23 25 27 28 LCS_GDT D 288 D 288 3 12 25 1 5 7 11 14 15 17 17 18 18 19 20 20 22 23 23 23 25 27 28 LCS_GDT K 289 K 289 3 7 25 0 3 4 5 6 8 10 13 15 18 19 20 20 22 23 23 23 25 27 28 LCS_GDT V 290 V 290 0 6 25 1 1 1 4 6 9 11 16 17 18 19 20 20 22 23 23 23 25 27 28 LCS_GDT A 291 A 291 0 6 25 1 5 7 11 14 15 17 17 18 18 19 20 20 22 23 23 23 25 27 28 LCS_GDT Y 292 Y 292 4 6 25 3 3 5 6 9 15 17 17 18 18 18 19 20 21 23 23 23 25 27 28 LCS_GDT N 293 N 293 4 6 24 3 4 5 6 7 8 10 11 12 13 13 19 20 20 21 21 23 24 26 26 LCS_GDT V 294 V 294 4 6 17 3 4 5 6 7 8 10 11 12 13 13 13 14 15 15 17 20 21 24 26 LCS_GDT A 295 A 295 4 6 17 3 4 5 6 7 8 10 11 12 13 13 13 14 17 20 23 25 26 31 31 LCS_GDT F 296 F 296 4 6 17 3 4 5 6 7 8 10 11 12 14 18 20 22 23 26 26 27 29 31 31 LCS_GDT E 297 E 297 3 6 17 0 2 3 5 6 8 10 11 12 16 18 20 22 23 26 26 27 29 31 31 LCS_GDT S 298 S 298 3 6 17 0 3 3 5 5 6 8 11 12 16 18 20 22 23 26 26 27 29 31 31 LCS_GDT G 299 G 299 3 6 17 1 3 5 6 7 8 10 11 13 16 18 20 22 23 26 26 27 29 31 31 LCS_GDT K 300 K 300 3 6 17 2 3 4 5 6 8 10 11 12 16 17 19 21 22 26 26 27 29 31 31 LCS_GDT K 301 K 301 5 8 17 2 3 5 6 7 8 10 11 12 14 15 17 21 22 26 26 27 29 31 31 LCS_GDT V 302 V 302 5 8 17 2 3 5 6 7 8 9 11 12 14 15 15 18 19 19 21 27 29 31 31 LCS_GDT A 303 A 303 5 8 17 3 3 5 6 7 8 9 10 12 14 15 15 16 16 18 19 23 26 31 31 LCS_GDT D 304 D 304 5 8 17 3 3 5 6 7 8 9 10 12 14 15 15 16 22 26 26 27 29 31 31 LCS_GDT L 305 L 305 5 8 17 3 5 5 6 7 8 9 10 12 14 15 15 16 17 18 22 25 26 29 31 LCS_GDT A 306 A 306 3 8 17 3 5 5 6 7 8 9 10 12 14 15 15 17 19 20 23 25 29 31 34 LCS_GDT I 307 I 307 3 8 17 3 5 5 6 6 8 9 10 12 14 15 16 17 19 20 23 25 29 31 34 LCS_GDT E 308 E 308 4 8 17 3 3 5 6 7 8 9 10 11 11 13 15 16 19 20 22 25 29 31 34 LCS_GDT R 309 R 309 4 7 17 3 5 5 6 6 8 8 10 12 14 15 15 16 19 19 19 21 28 35 35 LCS_GDT R 310 R 310 4 7 17 3 3 4 4 6 8 8 8 12 14 15 15 16 19 19 19 20 22 25 30 LCS_GDT E 311 E 311 4 6 17 3 4 4 6 6 8 8 8 11 14 15 15 16 19 19 19 20 28 30 32 LCS_GDT G 312 G 312 4 6 17 3 4 4 6 6 7 8 8 12 14 15 15 16 19 19 19 20 28 30 32 LCS_GDT H 313 H 313 4 6 17 0 4 4 5 5 7 7 9 12 14 15 15 16 19 21 23 25 28 35 35 LCS_GDT E 314 E 314 4 9 17 2 4 4 5 5 9 9 10 13 13 15 15 16 19 21 29 31 31 35 35 LCS_GDT N 315 N 315 4 9 17 2 3 4 5 6 7 9 11 13 13 14 15 20 21 25 29 31 31 35 35 LCS_GDT Y 316 Y 316 6 9 17 3 3 6 7 8 9 9 11 13 13 14 15 20 21 25 29 31 31 35 35 LCS_GDT G 317 G 317 6 9 17 3 4 6 7 8 9 9 11 13 13 14 16 20 21 25 29 31 31 35 35 LCS_GDT M 318 M 318 6 9 17 3 4 6 7 8 9 9 11 13 13 14 16 20 21 25 29 31 31 35 35 LCS_GDT G 319 G 319 6 9 17 3 4 6 7 8 9 9 11 13 13 14 15 16 19 21 29 31 31 35 35 LCS_GDT S 320 S 320 6 9 17 3 4 6 7 8 9 10 11 13 13 14 15 16 17 18 20 21 28 31 34 LCS_GDT I 321 I 321 6 9 17 3 4 6 7 8 9 10 11 13 13 14 15 16 17 18 20 21 26 28 30 LCS_GDT T 322 T 322 6 9 17 3 4 6 7 8 9 10 11 13 13 14 15 16 17 21 23 25 26 28 29 LCS_GDT D 323 D 323 4 9 17 3 3 4 7 8 9 10 11 13 13 14 16 18 20 21 23 25 26 28 29 LCS_GDT N 324 N 324 4 8 17 3 3 5 6 8 9 10 11 13 13 14 15 18 18 19 20 21 22 25 27 LCS_GDT D 325 D 325 4 8 17 3 3 5 6 8 9 10 11 13 13 14 15 16 17 18 20 21 22 27 28 LCS_GDT L 326 L 326 4 8 17 3 3 4 6 8 9 10 11 13 13 14 15 16 17 19 23 24 26 31 34 LCS_GDT T 327 T 327 4 8 17 0 2 5 6 8 9 10 11 12 13 14 15 17 19 20 23 25 29 31 34 LCS_GDT K 328 K 328 3 5 17 0 0 3 7 8 8 8 9 11 14 16 18 19 20 23 26 31 31 35 35 LCS_GDT L 329 L 329 3 4 17 0 3 4 4 4 4 7 10 12 13 16 18 21 22 25 29 31 31 35 35 LCS_GDT I 330 I 330 3 4 17 3 3 4 4 4 4 5 5 10 13 15 18 21 22 25 29 31 31 35 35 LCS_GDT D 331 D 331 3 4 11 3 3 4 4 4 5 5 5 12 12 14 18 21 22 25 29 31 31 35 35 LCS_GDT F 332 F 332 3 4 11 3 3 4 4 6 7 8 11 12 13 15 18 21 22 25 29 31 31 35 35 LCS_GDT A 333 A 333 3 4 11 1 3 3 3 6 7 8 10 13 15 16 18 19 22 23 29 31 31 35 35 LCS_GDT N 334 N 334 0 4 11 1 3 5 5 6 8 10 11 13 15 16 18 19 20 23 26 29 30 35 35 LCS_GDT A 335 A 335 3 4 10 0 3 4 4 4 5 6 6 12 12 14 14 16 17 18 21 24 26 29 29 LCS_GDT S 336 S 336 3 4 10 1 3 4 4 4 4 6 6 7 10 13 15 15 16 18 19 20 21 23 27 LCS_GDT P 337 P 337 3 4 14 1 3 4 4 4 4 6 6 7 12 13 15 15 16 17 18 23 25 27 28 LCS_GDT R 338 R 338 3 6 16 0 3 3 4 4 7 9 10 12 15 16 18 19 20 21 24 26 30 31 34 LCS_GDT P 339 P 339 3 9 16 1 3 4 7 9 9 10 11 13 15 16 18 19 20 23 26 29 30 31 34 LCS_GDT I 340 I 340 4 9 16 1 3 5 7 9 9 10 11 13 15 16 18 19 20 23 26 29 30 31 34 LCS_GDT V 341 V 341 4 9 16 2 4 6 7 9 9 10 11 13 15 16 18 19 20 23 26 27 30 31 34 LCS_GDT V 342 V 342 5 9 16 2 3 5 7 9 9 10 10 13 15 16 18 19 20 23 26 29 30 35 35 LCS_GDT R 343 R 343 5 9 20 3 4 6 7 9 9 10 11 13 15 16 18 19 20 23 29 31 31 35 35 LCS_GDT Y 344 Y 344 5 9 20 3 4 6 7 9 9 10 11 13 15 17 18 21 22 25 29 31 31 35 35 LCS_GDT V 345 V 345 5 9 20 3 4 6 7 9 9 10 11 13 15 17 18 21 22 25 29 31 31 35 35 LCS_GDT L 346 L 346 5 9 20 3 4 6 7 9 9 10 11 13 15 17 18 19 20 23 29 31 31 35 35 LCS_GDT Q 347 Q 347 5 9 20 3 4 6 7 9 9 10 11 13 15 17 18 22 23 26 29 31 31 35 35 LCS_GDT L 348 L 348 3 9 20 3 3 4 5 7 8 10 11 13 16 18 20 22 23 26 29 31 31 35 35 LCS_GDT T 349 T 349 3 5 20 3 3 4 6 7 8 10 11 13 16 18 20 22 23 26 29 31 31 35 35 LCS_GDT K 350 K 350 3 5 20 2 4 5 6 7 8 10 11 13 16 18 20 22 23 26 29 31 31 35 35 LCS_GDT P 351 P 351 3 5 20 1 3 5 6 7 8 10 11 14 16 18 20 22 23 26 29 31 31 35 35 LCS_GDT L 352 L 352 3 5 20 1 3 5 6 7 8 10 13 15 17 19 21 22 23 26 29 31 31 35 35 LCS_GDT D 353 D 353 3 5 20 2 5 5 5 7 8 9 12 15 17 19 21 22 23 25 29 31 31 35 35 LCS_GDT E 354 E 354 3 5 20 2 5 5 6 7 8 10 13 15 17 19 21 22 23 26 26 31 31 35 35 LCS_GDT I 355 I 355 3 4 20 1 3 4 6 7 8 10 13 15 17 19 21 22 23 26 29 31 31 35 35 LCS_GDT L 356 L 356 3 4 20 2 5 5 6 7 8 10 11 14 17 19 21 22 23 26 29 31 31 35 35 LCS_GDT E 357 E 357 3 4 20 0 4 5 6 7 8 10 11 13 17 19 21 22 23 26 29 31 31 35 35 LCS_GDT E 358 E 358 3 4 20 2 5 5 6 7 8 9 11 11 13 17 20 22 23 26 26 27 29 32 34 LCS_GDT M 359 M 359 3 4 20 2 5 5 5 6 8 9 11 13 16 18 21 22 23 26 29 31 31 35 35 LCS_GDT K 360 K 360 3 4 20 1 3 5 6 7 8 9 11 13 16 18 20 22 23 26 29 31 31 35 35 LCS_GDT A 361 A 361 0 3 20 1 3 4 4 6 7 9 11 15 17 19 21 22 23 26 29 31 31 35 35 LCS_GDT A 362 A 362 0 3 20 0 1 1 3 7 8 10 13 15 17 19 21 22 23 25 29 31 31 35 35 LCS_GDT D 374 D 374 3 3 6 3 3 3 5 6 7 9 10 11 12 13 15 16 19 20 23 26 26 29 29 LCS_GDT F 375 F 375 3 3 6 3 4 4 5 6 7 9 10 13 14 18 20 22 23 26 26 27 29 31 31 LCS_GDT I 376 I 376 3 3 6 3 3 4 4 4 6 7 9 12 13 18 20 22 23 26 26 27 29 31 31 LCS_GDT F 377 F 377 3 3 6 0 3 4 4 5 5 8 9 11 16 18 20 22 23 26 26 27 29 31 31 LCS_GDT D 378 D 378 0 3 11 1 2 4 4 4 5 8 8 10 12 17 20 22 23 26 26 27 29 31 31 LCS_GDT S 379 S 379 0 3 11 1 5 5 5 5 6 8 8 10 12 14 16 22 23 26 26 27 29 31 31 LCS_GDT W 380 W 380 0 3 11 0 1 3 4 4 6 7 7 9 10 10 14 15 16 18 19 21 26 28 29 LCS_GDT L 381 L 381 3 3 16 1 3 3 4 4 6 7 7 9 10 10 12 13 16 18 22 25 26 28 29 LCS_GDT S 382 S 382 3 4 18 3 3 3 4 4 5 6 6 9 11 12 15 17 20 21 23 25 26 28 29 LCS_GDT D 383 D 383 3 4 18 3 3 3 4 4 6 8 9 11 12 14 16 18 20 21 23 25 26 28 29 LCS_GDT T 384 T 384 3 4 18 3 3 3 4 4 6 7 8 11 13 14 16 18 20 21 23 25 26 28 29 LCS_GDT N 385 N 385 3 4 18 3 3 3 4 4 6 8 9 11 13 14 16 18 20 21 23 25 26 28 29 LCS_GDT K 386 K 386 3 4 18 3 3 3 3 4 6 8 9 11 12 14 16 18 20 21 23 25 26 28 29 LCS_GDT K 387 K 387 3 4 18 3 3 3 3 4 6 8 9 11 13 14 16 18 20 21 23 25 26 28 29 LCS_GDT L 388 L 388 3 4 18 3 3 3 4 6 7 9 10 11 13 14 16 18 20 21 23 25 26 28 29 LCS_GDT I 389 I 389 0 7 18 1 1 3 4 7 7 9 10 11 13 14 16 18 20 21 23 25 26 28 29 LCS_GDT Q 390 Q 390 0 7 18 0 1 3 5 7 7 9 10 11 12 14 16 18 19 21 23 24 26 28 29 LCS_GDT N 391 N 391 0 7 18 1 1 4 4 7 7 9 10 11 12 14 15 18 19 21 23 25 26 28 29 LCS_GDT T 392 T 392 4 7 18 1 3 4 5 7 7 9 10 11 13 14 16 18 20 21 23 25 26 28 29 LCS_GDT Y 393 Y 393 4 7 18 2 3 4 5 7 7 9 10 11 13 14 16 18 20 21 23 25 26 28 29 LCS_GDT G 394 G 394 4 7 18 1 3 4 5 7 7 9 10 11 13 14 16 18 20 21 23 25 26 28 29 LCS_GDT T 395 T 395 4 7 18 2 3 4 5 7 7 9 10 11 13 14 16 18 20 21 23 25 26 28 29 LCS_GDT G 396 G 396 0 6 18 1 2 3 5 6 7 9 10 11 13 14 16 18 20 21 23 25 26 28 29 LCS_GDT Y 397 Y 397 0 4 18 1 1 2 3 5 6 8 9 11 13 14 16 18 20 21 23 25 26 28 29 LCS_GDT Y 398 Y 398 0 4 18 1 1 2 3 6 7 8 10 11 13 14 16 18 20 21 23 25 26 28 29 LCS_GDT Y 399 Y 399 0 4 18 0 0 2 3 5 5 7 9 11 13 14 16 18 20 21 23 25 26 28 29 LCS_GDT L 400 L 400 0 3 18 0 0 2 3 5 5 6 7 8 10 11 14 17 20 21 23 25 26 28 29 LCS_GDT Q 401 Q 401 0 3 16 0 0 0 3 3 3 4 7 8 9 10 12 13 20 21 23 25 26 28 29 LCS_GDT D 402 D 402 0 3 16 1 1 2 3 3 4 6 7 8 9 11 12 14 20 21 23 25 26 28 29 LCS_AVERAGE LCS_A: 4.48 ( 1.62 3.14 8.68 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 3 6 7 11 14 15 17 17 18 18 19 21 22 23 26 29 31 31 35 35 GDT PERCENT_AT 1.53 3.06 3.57 5.61 7.14 7.65 8.67 8.67 9.18 9.18 9.69 10.71 11.22 11.73 13.27 14.80 15.82 15.82 17.86 17.86 GDT RMS_LOCAL 0.05 0.77 0.87 1.51 1.72 1.88 2.23 2.23 2.48 2.48 3.01 4.31 4.49 4.62 5.26 6.04 6.18 6.18 6.82 6.82 GDT RMS_ALL_AT 36.58 35.06 35.15 35.72 35.66 35.53 35.78 35.78 35.61 35.61 35.28 32.19 32.18 32.15 35.05 47.31 47.42 47.42 46.97 46.97 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA D 196 D 196 29.592 7 - - 29.592 0.000 0.000 - LGA F 197 F 197 26.917 10 - - 26.917 0.000 0.000 - LGA Y 198 Y 198 29.771 11 - - 29.771 0.000 0.000 - LGA N 199 N 199 27.033 7 - - 27.033 0.000 0.000 - LGA K 200 K 200 30.699 8 - - 30.699 0.000 0.000 - LGA L 201 L 201 33.772 7 - - 33.772 0.000 0.000 - LGA D 202 D 202 34.954 7 - - 34.954 0.000 0.000 - LGA V 203 V 203 39.364 6 - - 39.364 0.000 0.000 - LGA S 204 S 204 45.505 5 - - 45.505 0.000 0.000 - LGA E 205 E 205 50.466 8 - - 50.466 0.000 0.000 - LGA N 206 N 206 54.338 7 - - 54.338 0.000 0.000 - LGA N 207 N 207 53.410 7 - - 53.410 0.000 0.000 - LGA S 208 S 208 53.850 5 - - 53.850 0.000 0.000 - LGA D 209 D 209 53.035 7 - - 53.035 0.000 0.000 - LGA Q 210 Q 210 53.487 8 - - 53.487 0.000 0.000 - LGA F 211 F 211 49.507 10 - - 49.507 0.000 0.000 - LGA K 212 K 212 50.429 8 - - 50.429 0.000 0.000 - LGA H 213 H 213 48.808 9 - - 48.808 0.000 0.000 - LGA G 214 G 214 47.465 3 - - 47.465 0.000 0.000 - LGA S 215 S 215 43.431 5 - - 43.431 0.000 0.000 - LGA V 216 V 216 39.188 6 - - 39.188 0.000 0.000 - LGA N 217 N 217 37.947 7 - - 37.947 0.000 0.000 - LGA T 218 T 218 32.841 6 - - 32.841 0.000 0.000 - LGA K 219 K 219 30.445 8 - - 30.445 0.000 0.000 - LGA Y 220 Y 220 29.926 11 - - 29.926 0.000 0.000 - LGA E 221 E 221 34.461 8 - - 34.461 0.000 0.000 - LGA E 222 E 222 37.962 8 - - 37.962 0.000 0.000 - LGA A 223 A 223 39.010 4 - - 39.010 0.000 0.000 - LGA N 224 N 224 39.494 7 - - 39.494 0.000 0.000 - LGA I 225 I 225 39.956 7 - - 39.956 0.000 0.000 - LGA Q 226 Q 226 43.427 8 - - 43.427 0.000 0.000 - LGA T 227 T 227 42.958 6 - - 42.958 0.000 0.000 - LGA K 228 K 228 45.833 8 - - 45.833 0.000 0.000 - LGA D 229 D 229 50.548 7 - - 50.548 0.000 0.000 - LGA G 230 G 230 50.468 3 - - 50.468 0.000 0.000 - LGA S 231 S 231 48.304 5 - - 48.304 0.000 0.000 - LGA G 232 G 232 46.520 3 - - 46.520 0.000 0.000 - LGA S 233 S 233 46.520 5 - - 46.520 0.000 0.000 - LGA T 234 T 234 41.988 6 - - 41.988 0.000 0.000 - LGA G 235 G 235 42.077 3 - - 42.077 0.000 0.000 - LGA A 236 A 236 44.210 4 - - 44.210 0.000 0.000 - LGA N 237 N 237 41.161 7 - - 41.161 0.000 0.000 - LGA G 238 G 238 42.785 3 - - 42.785 0.000 0.000 - LGA A 239 A 239 42.036 4 - - 42.036 0.000 0.000 - LGA I 240 I 240 41.179 7 - - 41.179 0.000 0.000 - LGA I 241 I 241 39.660 7 - - 39.660 0.000 0.000 - LGA L 242 L 242 39.733 7 - - 39.733 0.000 0.000 - LGA D 243 D 243 38.357 7 - - 38.357 0.000 0.000 - LGA H 244 H 244 44.167 9 - - 44.167 0.000 0.000 - LGA K 245 K 245 47.874 8 - - 47.874 0.000 0.000 - LGA L 246 L 246 52.392 7 - - 52.392 0.000 0.000 - LGA T 247 T 247 57.113 6 - - 57.113 0.000 0.000 - LGA K 248 K 248 57.144 8 - - 57.144 0.000 0.000 - LGA E 249 E 249 54.823 8 - - 54.823 0.000 0.000 - LGA K 250 K 250 54.046 8 - - 54.046 0.000 0.000 - LGA N 251 N 251 51.824 7 - - 51.824 0.000 0.000 - LGA F 252 F 252 48.438 10 - - 48.438 0.000 0.000 - LGA S 253 S 253 46.326 5 - - 46.326 0.000 0.000 - LGA Y 254 Y 254 44.202 11 - - 44.202 0.000 0.000 - LGA S 255 S 255 44.455 5 - - 44.455 0.000 0.000 - LGA T 256 T 256 43.746 6 - - 43.746 0.000 0.000 - LGA S 257 S 257 44.884 5 - - 44.884 0.000 0.000 - LGA A 258 A 258 40.853 4 - - 40.853 0.000 0.000 - LGA K 259 K 259 39.429 8 - - 39.429 0.000 0.000 - LGA G 260 G 260 37.040 3 - - 37.040 0.000 0.000 - LGA T 261 T 261 36.272 6 - - 36.272 0.000 0.000 - LGA P 262 P 262 33.888 6 - - 33.888 0.000 0.000 - LGA W 263 W 263 29.610 13 - - 29.610 0.000 0.000 - LGA Y 264 Y 264 23.688 11 - - 23.688 0.000 0.000 - LGA A 265 A 265 21.762 4 - - 21.762 0.000 0.000 - LGA N 266 N 266 21.504 7 - - 21.504 0.000 0.000 - LGA Y 267 Y 267 16.456 11 - - 16.456 0.000 0.000 - LGA K 268 K 268 10.349 8 - - 10.349 0.000 0.000 - LGA I 269 I 269 10.885 7 - - 10.885 0.000 0.000 - LGA D 270 D 270 9.540 7 - - 9.540 0.000 0.000 - LGA E 271 E 271 5.464 8 - - 5.464 0.000 0.000 - LGA R 272 R 272 2.368 10 - - 2.368 9.545 3.471 - LGA L 273 L 273 3.464 7 - - 3.464 4.545 2.273 - LGA V 274 V 274 2.994 6 - - 2.994 6.818 3.896 - LGA P 275 P 275 9.003 6 - - 9.003 0.000 0.000 - LGA Y 276 Y 276 8.208 11 - - 8.208 0.000 0.000 - LGA V 277 V 277 1.700 6 - - 1.700 12.727 7.273 - LGA S 278 S 278 1.247 5 - - 1.247 16.364 10.909 - LGA G 279 G 279 2.086 3 - - 2.086 9.545 9.545 - LGA I 280 I 280 2.262 7 - - 2.262 9.545 4.773 - LGA Q 281 Q 281 1.881 8 - - 1.881 12.727 5.657 - LGA M 282 M 282 0.800 7 - - 0.800 20.455 10.227 - LGA H 283 H 283 1.555 9 - - 1.555 12.727 5.091 - LGA M 284 M 284 2.181 7 - - 2.181 9.545 4.773 - LGA V 285 V 285 0.864 6 - - 0.864 20.455 11.688 - LGA Q 286 Q 286 2.123 8 - - 2.123 9.545 4.242 - LGA A 287 A 287 1.955 4 - - 1.955 12.727 10.182 - LGA D 288 D 288 2.697 7 - - 2.697 6.818 3.409 - LGA K 289 K 289 8.507 8 - - 8.507 0.000 0.000 - LGA V 290 V 290 8.449 6 - - 8.449 0.000 0.000 - LGA A 291 A 291 1.682 4 - - 1.682 12.727 10.182 - LGA Y 292 Y 292 3.729 11 - - 3.729 2.727 0.909 - LGA N 293 N 293 9.547 7 - - 9.547 0.000 0.000 - LGA V 294 V 294 15.448 6 - - 15.448 0.000 0.000 - LGA A 295 A 295 20.614 4 - - 20.614 0.000 0.000 - LGA F 296 F 296 25.172 10 - - 25.172 0.000 0.000 - LGA E 297 E 297 27.765 8 - - 27.765 0.000 0.000 - LGA S 298 S 298 27.607 5 - - 27.607 0.000 0.000 - LGA G 299 G 299 33.315 3 - - 33.315 0.000 0.000 - LGA K 300 K 300 35.063 8 - - 35.063 0.000 0.000 - LGA K 301 K 301 36.856 8 - - 36.856 0.000 0.000 - LGA V 302 V 302 34.744 6 - - 34.744 0.000 0.000 - LGA A 303 A 303 34.929 4 - - 34.929 0.000 0.000 - LGA D 304 D 304 39.981 7 - - 39.981 0.000 0.000 - LGA L 305 L 305 39.380 7 - - 39.380 0.000 0.000 - LGA A 306 A 306 40.439 4 - - 40.439 0.000 0.000 - LGA I 307 I 307 38.202 7 - - 38.202 0.000 0.000 - LGA E 308 E 308 42.774 8 - - 42.774 0.000 0.000 - LGA R 309 R 309 42.149 10 - - 42.149 0.000 0.000 - LGA R 310 R 310 42.016 10 - - 42.016 0.000 0.000 - LGA E 311 E 311 42.229 8 - - 42.229 0.000 0.000 - LGA G 312 G 312 40.027 3 - - 40.027 0.000 0.000 - LGA H 313 H 313 36.477 9 - - 36.477 0.000 0.000 - LGA E 314 E 314 33.969 8 - - 33.969 0.000 0.000 - LGA N 315 N 315 30.703 7 - - 30.703 0.000 0.000 - LGA Y 316 Y 316 33.194 11 - - 33.194 0.000 0.000 - LGA G 317 G 317 31.832 3 - - 31.832 0.000 0.000 - LGA M 318 M 318 30.851 7 - - 30.851 0.000 0.000 - LGA G 319 G 319 30.210 3 - - 30.210 0.000 0.000 - LGA S 320 S 320 29.757 5 - - 29.757 0.000 0.000 - LGA I 321 I 321 28.372 7 - - 28.372 0.000 0.000 - LGA T 322 T 322 30.681 6 - - 30.681 0.000 0.000 - LGA D 323 D 323 32.426 7 - - 32.426 0.000 0.000 - LGA N 324 N 324 35.116 7 - - 35.116 0.000 0.000 - LGA D 325 D 325 32.372 7 - - 32.372 0.000 0.000 - LGA L 326 L 326 30.446 7 - - 30.446 0.000 0.000 - LGA T 327 T 327 27.124 6 - - 27.124 0.000 0.000 - LGA K 328 K 328 30.682 8 - - 30.682 0.000 0.000 - LGA L 329 L 329 36.316 7 - - 36.316 0.000 0.000 - LGA I 330 I 330 39.488 7 - - 39.488 0.000 0.000 - LGA D 331 D 331 40.153 7 - - 40.153 0.000 0.000 - LGA F 332 F 332 40.745 10 - - 40.745 0.000 0.000 - LGA A 333 A 333 34.297 4 - - 34.297 0.000 0.000 - LGA N 334 N 334 31.010 7 - - 31.010 0.000 0.000 - LGA A 335 A 335 27.709 4 - - 27.709 0.000 0.000 - LGA S 336 S 336 22.541 5 - - 22.541 0.000 0.000 - LGA P 337 P 337 24.968 6 - - 24.968 0.000 0.000 - LGA R 338 R 338 27.753 10 - - 27.753 0.000 0.000 - LGA P 339 P 339 30.419 6 - - 30.419 0.000 0.000 - LGA I 340 I 340 25.154 7 - - 25.154 0.000 0.000 - LGA V 341 V 341 21.265 6 - - 21.265 0.000 0.000 - LGA V 342 V 342 22.886 6 - - 22.886 0.000 0.000 - LGA R 343 R 343 23.730 10 - - 23.730 0.000 0.000 - LGA Y 344 Y 344 29.792 11 - - 29.792 0.000 0.000 - LGA V 345 V 345 31.948 6 - - 31.948 0.000 0.000 - LGA L 346 L 346 38.415 7 - - 38.415 0.000 0.000 - LGA Q 347 Q 347 39.252 8 - - 39.252 0.000 0.000 - LGA L 348 L 348 39.471 7 - - 39.471 0.000 0.000 - LGA T 349 T 349 43.007 6 - - 43.007 0.000 0.000 - LGA K 350 K 350 43.664 8 - - 43.664 0.000 0.000 - LGA P 351 P 351 40.012 6 - - 40.012 0.000 0.000 - LGA L 352 L 352 36.905 7 - - 36.905 0.000 0.000 - LGA D 353 D 353 40.702 7 - - 40.702 0.000 0.000 - LGA E 354 E 354 42.716 8 - - 42.716 0.000 0.000 - LGA I 355 I 355 37.909 7 - - 37.909 0.000 0.000 - LGA L 356 L 356 37.160 7 - - 37.160 0.000 0.000 - LGA E 357 E 357 42.278 8 - - 42.278 0.000 0.000 - LGA E 358 E 358 41.182 8 - - 41.182 0.000 0.000 - LGA M 359 M 359 36.637 7 - - 36.637 0.000 0.000 - LGA K 360 K 360 38.908 8 - - 38.908 0.000 0.000 - LGA A 361 A 361 36.229 4 - - 36.229 0.000 0.000 - LGA A 362 A 362 32.809 4 - - 32.809 0.000 0.000 - LGA D 374 D 374 23.046 7 - - 23.046 0.000 0.000 - LGA F 375 F 375 25.712 10 - - 25.712 0.000 0.000 - LGA I 376 I 376 24.410 7 - - 24.410 0.000 0.000 - LGA F 377 F 377 20.341 10 - - 20.341 0.000 0.000 - LGA D 378 D 378 23.163 7 - - 23.163 0.000 0.000 - LGA S 379 S 379 20.199 5 - - 20.199 0.000 0.000 - LGA W 380 W 380 22.736 13 - - 22.736 0.000 0.000 - LGA L 381 L 381 21.534 7 - - 21.534 0.000 0.000 - LGA S 382 S 382 24.769 5 - - 24.769 0.000 0.000 - LGA D 383 D 383 30.513 7 - - 30.513 0.000 0.000 - LGA T 384 T 384 34.359 6 - - 34.359 0.000 0.000 - LGA N 385 N 385 33.803 7 - - 33.803 0.000 0.000 - LGA K 386 K 386 34.014 8 - - 34.014 0.000 0.000 - LGA K 387 K 387 34.879 8 - - 34.879 0.000 0.000 - LGA L 388 L 388 30.815 7 - - 30.815 0.000 0.000 - LGA I 389 I 389 30.896 7 - - 30.896 0.000 0.000 - LGA Q 390 Q 390 29.890 8 - - 29.890 0.000 0.000 - LGA N 391 N 391 28.693 7 - - 28.693 0.000 0.000 - LGA T 392 T 392 30.298 6 - - 30.298 0.000 0.000 - LGA Y 393 Y 393 33.949 11 - - 33.949 0.000 0.000 - LGA G 394 G 394 37.016 3 - - 37.016 0.000 0.000 - LGA T 395 T 395 40.901 6 - - 40.901 0.000 0.000 - LGA G 396 G 396 41.239 3 - - 41.239 0.000 0.000 - LGA Y 397 Y 397 43.592 11 - - 43.592 0.000 0.000 - LGA Y 398 Y 398 49.045 11 - - 49.045 0.000 0.000 - LGA Y 399 Y 399 50.299 11 - - 50.299 0.000 0.000 - LGA L 400 L 400 53.722 7 - - 53.722 0.000 0.000 - LGA Q 401 Q 401 54.990 8 - - 54.990 0.000 0.000 - LGA D 402 D 402 60.466 7 - - 60.466 0.000 0.000 - # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 196 784 196 25.00 1554 196 12.61 196 0 SUMMARY(RMSD_GDC): 31.230 31.230 31.230 0.967 0.554 0.000 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 207 196 4.0 17 2.23 8.036 6.812 0.728 LGA_LOCAL RMSD: 2.235 Number of atoms: 17 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 35.777 Number of assigned atoms: 196 Std_ASGN_ATOMS RMSD: 31.230 Standard rmsd on all 196 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.352168 * X + 0.657018 * Y + -0.666562 * Z + 98.684303 Y_new = 0.913658 * X + 0.086869 * Y + -0.397092 * Z + -43.224430 Z_new = -0.202993 * X + -0.748853 * Y + -0.630883 * Z + 2.348419 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.938695 0.204413 -2.270900 [DEG: 111.0791 11.7120 -130.1130 ] ZXZ: -1.033522 2.253487 -2.876883 [DEG: -59.2164 129.1153 -164.8332 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: S0987TS312_3-D2 REMARK 2: S0987-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap S0987TS312_3-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 207 196 4.0 17 2.23 6.812 31.23 REMARK ---------------------------------------------------------- MOLECULE S0987TS312_3-D2 PFRMAT TS TARGET S0987 MODEL 3 PARENT 2VWK_A ATOM 196 CA ASP 196 3.132 -29.120 16.921 0.00 0.00 C ATOM 197 CA PHE 197 6.814 -25.777 13.208 0.00 0.00 C ATOM 198 CA TYR 198 5.003 -29.477 11.748 0.00 0.00 C ATOM 199 CA ASN 199 6.334 -28.732 7.689 0.00 0.00 C ATOM 200 CA LYS 200 4.705 -31.258 5.388 0.00 0.00 C ATOM 201 CA LEU 201 3.452 -32.254 1.980 0.00 0.00 C ATOM 202 CA ASP 202 5.489 -31.735 0.550 0.00 0.00 C ATOM 203 CA VAL 203 2.791 -33.673 -3.156 0.00 0.00 C ATOM 204 CA SER 204 -0.524 -35.053 -5.326 0.00 0.00 C ATOM 205 CA GLU 205 -2.713 -35.447 -9.475 0.00 0.00 C ATOM 206 CA ASN 206 -6.141 -36.584 -11.103 0.00 0.00 C ATOM 207 CA ASN 207 -6.527 -34.553 -13.068 0.00 0.00 C ATOM 208 CA SER 208 -9.662 -34.825 -15.328 0.00 0.00 C ATOM 209 CA ASP 209 -9.312 -32.451 -15.110 0.00 0.00 C ATOM 210 CA GLN 210 -11.977 -32.020 -16.456 0.00 0.00 C ATOM 211 CA PHE 211 -12.676 -31.847 -14.647 0.00 0.00 C ATOM 212 CA LYS 212 -15.926 -32.052 -15.726 0.00 0.00 C ATOM 213 CA HIS 213 -17.473 -32.290 -18.641 0.00 0.00 C ATOM 214 CA GLY 214 -17.465 -34.845 -17.744 0.00 0.00 C ATOM 215 CA SER 215 -15.300 -35.676 -16.780 0.00 0.00 C ATOM 216 CA VAL 216 -13.156 -36.216 -13.630 0.00 0.00 C ATOM 217 CA ASN 217 -11.423 -37.509 -12.118 0.00 0.00 C ATOM 218 CA THR 218 -8.014 -35.948 -9.025 0.00 0.00 C ATOM 219 CA LYS 219 1.185 -32.106 -3.352 0.00 0.00 C ATOM 220 CA TYR 220 5.057 -29.650 -2.995 0.00 0.00 C ATOM 221 CA GLU 221 7.938 -27.434 -0.056 0.00 0.00 C ATOM 222 CA GLU 222 11.723 -24.281 1.599 0.00 0.00 C ATOM 223 CA ALA 223 11.989 -21.515 2.319 0.00 0.00 C ATOM 224 CA ASN 224 9.462 -20.661 1.503 0.00 0.00 C ATOM 225 CA ILE 225 8.736 -20.189 4.553 0.00 0.00 C ATOM 226 CA GLN 226 7.690 -23.987 4.901 0.00 0.00 C ATOM 227 CA THR 227 4.761 -25.241 2.973 0.00 0.00 C ATOM 228 CA LYS 228 2.274 -24.850 5.208 0.00 0.00 C ATOM 229 CA ASP 229 2.316 -26.365 7.641 0.00 0.00 C ATOM 230 CA GLY 230 1.237 -29.578 5.589 0.00 0.00 C ATOM 231 CA SER 231 -1.088 -29.740 3.652 0.00 0.00 C ATOM 232 CA GLY 232 -4.004 -30.888 6.399 0.00 0.00 C ATOM 233 CA SER 233 -4.342 -33.498 6.851 0.00 0.00 C ATOM 234 CA THR 234 -4.584 -34.610 3.468 0.00 0.00 C ATOM 235 CA GLY 235 -7.301 -34.491 3.236 0.00 0.00 C ATOM 236 CA ALA 236 -9.836 -36.566 6.137 0.00 0.00 C ATOM 237 CA ASN 237 -10.260 -38.800 4.495 0.00 0.00 C ATOM 238 CA GLY 238 -14.293 -41.103 3.840 0.00 0.00 C ATOM 239 CA ALA 239 -13.298 -41.615 1.014 0.00 0.00 C ATOM 240 CA ILE 240 -14.882 -41.748 1.460 0.00 0.00 C ATOM 241 CA ILE 241 -10.628 -38.448 0.106 0.00 0.00 C ATOM 242 CA LEU 242 -12.783 -37.847 -1.482 0.00 0.00 C ATOM 243 CA ASP 243 -9.703 -34.694 -1.363 0.00 0.00 C ATOM 244 CA HIS 244 -14.258 -37.662 -0.047 0.00 0.00 C ATOM 245 CA LYS 245 -16.335 -39.079 0.114 0.00 0.00 C ATOM 246 CA LEU 246 -17.838 -40.281 -0.103 0.00 0.00 C ATOM 247 CA THR 247 -21.361 -42.300 -4.484 0.00 0.00 C ATOM 248 CA LYS 248 -17.889 -39.955 -4.226 0.00 0.00 C ATOM 249 CA GLU 249 -13.963 -37.174 -3.427 0.00 0.00 C ATOM 250 CA LYS 250 -9.649 -34.404 -4.120 0.00 0.00 C ATOM 251 CA ASN 251 -5.785 -32.056 -2.184 0.00 0.00 C ATOM 252 CA PHE 252 -4.475 -29.445 -4.427 0.00 0.00 C ATOM 253 CA SER 253 -1.633 -26.077 -4.877 0.00 0.00 C ATOM 254 CA TYR 254 0.423 -25.509 -1.349 0.00 0.00 C ATOM 255 CA SER 255 0.863 -21.981 -0.075 0.00 0.00 C ATOM 256 CA THR 256 1.983 -20.093 -2.768 0.00 0.00 C ATOM 257 CA SER 257 -1.607 -22.461 -7.024 0.00 0.00 C ATOM 258 CA ALA 258 -0.964 -21.513 -7.033 0.00 0.00 C ATOM 259 CA LYS 259 1.688 -20.419 -3.832 0.00 0.00 C ATOM 260 CA GLY 260 3.220 -20.388 -4.593 0.00 0.00 C ATOM 261 CA THR 261 3.527 -18.529 -2.605 0.00 0.00 C ATOM 262 CA PRO 262 4.994 -16.638 -1.271 0.00 0.00 C ATOM 263 CA TRP 263 7.731 -16.992 -2.149 0.00 0.00 C ATOM 264 CA TYR 264 7.572 -13.827 -3.702 0.00 0.00 C ATOM 265 CA ALA 265 4.556 -14.665 -6.187 0.00 0.00 C ATOM 266 CA ASN 266 4.587 -18.416 -7.187 0.00 0.00 C ATOM 267 CA TYR 267 6.457 -16.705 -8.309 0.00 0.00 C ATOM 268 CA LYS 268 4.211 -14.605 -11.181 0.00 0.00 C ATOM 269 CA ILE 269 1.688 -17.712 -12.725 0.00 0.00 C ATOM 270 CA ASP 270 2.711 -20.218 -12.371 0.00 0.00 C ATOM 271 CA GLU 271 3.774 -17.836 -14.900 0.00 0.00 C ATOM 272 CA ARG 272 0.872 -16.695 -17.540 0.00 0.00 C ATOM 273 CA LEU 273 2.407 -13.127 -16.244 0.00 0.00 C ATOM 274 CA VAL 274 0.532 -10.586 -16.989 0.00 0.00 C ATOM 275 CA PRO 275 1.255 -7.210 -14.981 0.00 0.00 C ATOM 276 CA TYR 276 -0.777 -4.328 -16.789 0.00 0.00 C ATOM 277 CA VAL 277 -1.935 -5.515 -20.398 0.00 0.00 C ATOM 278 CA SER 278 -3.076 -3.600 -23.260 0.00 0.00 C ATOM 279 CA GLY 279 -3.972 0.220 -24.770 0.00 0.00 C ATOM 280 CA ILE 280 -1.754 1.865 -21.861 0.00 0.00 C ATOM 281 CA GLN 281 -2.699 5.040 -20.594 0.00 0.00 C ATOM 282 CA MET 282 -1.222 5.753 -16.520 0.00 0.00 C ATOM 283 CA HIS 283 -1.347 8.907 -14.640 0.00 0.00 C ATOM 284 CA MET 284 -2.260 9.301 -12.062 0.00 0.00 C ATOM 285 CA VAL 285 -2.998 11.681 -9.328 0.00 0.00 C ATOM 286 CA GLN 286 -4.701 12.151 -7.294 0.00 0.00 C ATOM 287 CA ALA 287 -5.408 13.233 -3.836 0.00 0.00 C ATOM 288 CA ASP 288 -7.345 13.953 -1.190 0.00 0.00 C ATOM 289 CA LYS 289 -11.851 15.171 -3.648 0.00 0.00 C ATOM 290 CA VAL 290 -16.454 16.678 -2.487 0.00 0.00 C ATOM 291 CA ALA 291 -12.277 17.076 1.682 0.00 0.00 C ATOM 292 CA TYR 292 -7.499 15.878 1.994 0.00 0.00 C ATOM 293 CA ASN 293 -10.105 18.220 3.613 0.00 0.00 C ATOM 294 CA VAL 294 -10.400 17.746 7.359 0.00 0.00 C ATOM 295 CA ALA 295 -12.973 19.173 9.817 0.00 0.00 C ATOM 296 CA PHE 296 -14.534 16.497 12.092 0.00 0.00 C ATOM 297 CA GLU 297 -15.765 15.887 15.035 0.00 0.00 C ATOM 298 CA SER 298 -18.892 12.575 16.232 0.00 0.00 C ATOM 299 CA GLY 299 -19.146 10.721 18.941 0.00 0.00 C ATOM 300 CA LYS 300 -14.727 10.389 18.384 0.00 0.00 C ATOM 301 CA LYS 301 -10.994 8.028 17.949 0.00 0.00 C ATOM 302 CA VAL 302 -8.568 8.215 14.949 0.00 0.00 C ATOM 303 CA ALA 303 -7.407 11.528 12.968 0.00 0.00 C ATOM 304 CA ASP 304 -8.705 13.870 15.144 0.00 0.00 C ATOM 305 CA LEU 305 -9.973 17.094 13.068 0.00 0.00 C ATOM 306 CA ALA 306 -8.209 18.553 10.844 0.00 0.00 C ATOM 307 CA ILE 307 -7.569 18.249 7.487 0.00 0.00 C ATOM 308 CA GLU 308 -9.370 21.543 5.466 0.00 0.00 C ATOM 309 CA ARG 309 -8.660 20.726 2.052 0.00 0.00 C ATOM 310 CA ARG 310 -6.500 18.325 0.316 0.00 0.00 C ATOM 311 CA GLU 311 -7.426 18.584 -3.422 0.00 0.00 C ATOM 312 CA GLY 312 -6.043 16.712 -6.069 0.00 0.00 C ATOM 313 CA HIS 313 -6.925 16.379 -9.970 0.00 0.00 C ATOM 314 CA GLU 314 -5.996 15.364 -12.699 0.00 0.00 C ATOM 315 CA ASN 315 -7.243 15.601 -16.484 0.00 0.00 C ATOM 316 CA TYR 316 -7.659 18.639 -15.887 0.00 0.00 C ATOM 317 CA GLY 317 -8.999 19.740 -14.025 0.00 0.00 C ATOM 318 CA MET 318 -8.436 20.500 -10.601 0.00 0.00 C ATOM 319 CA GLY 319 -8.003 22.139 -7.582 0.00 0.00 C ATOM 320 CA SER 320 -8.223 22.666 -4.142 0.00 0.00 C ATOM 321 CA ILE 321 -6.760 22.748 -1.354 0.00 0.00 C ATOM 322 CA THR 322 -8.498 24.134 1.277 0.00 0.00 C ATOM 323 CA ASP 323 -9.023 26.063 3.864 0.00 0.00 C ATOM 324 CA ASN 324 -11.790 28.262 3.358 0.00 0.00 C ATOM 325 CA ASP 325 -12.873 31.688 1.603 0.00 0.00 C ATOM 326 CA LEU 326 -13.330 31.251 -1.588 0.00 0.00 C ATOM 327 CA THR 327 -14.153 32.896 -4.515 0.00 0.00 C ATOM 328 CA LYS 328 -16.417 36.524 -5.123 0.00 0.00 C ATOM 329 CA LEU 329 -18.836 39.965 -6.167 0.00 0.00 C ATOM 330 CA ILE 330 -21.407 43.091 -7.874 0.00 0.00 C ATOM 331 CA ASP 331 -24.584 45.176 -10.175 0.00 0.00 C ATOM 332 CA PHE 332 -24.173 42.861 -13.860 0.00 0.00 C ATOM 333 CA ALA 333 -21.804 39.466 -13.381 0.00 0.00 C ATOM 334 CA ASN 334 -19.324 36.244 -12.011 0.00 0.00 C ATOM 335 CA ALA 335 -16.698 33.344 -9.595 0.00 0.00 C ATOM 336 CA SER 336 -14.097 30.417 -7.260 0.00 0.00 C ATOM 337 CA PRO 337 -13.002 29.295 -9.753 0.00 0.00 C ATOM 338 CA ARG 338 -15.568 31.967 -12.753 0.00 0.00 C ATOM 339 CA PRO 339 -16.170 31.455 -14.782 0.00 0.00 C ATOM 340 CA ILE 340 -12.926 29.429 -11.956 0.00 0.00 C ATOM 341 CA VAL 341 -10.655 26.533 -8.999 0.00 0.00 C ATOM 342 CA VAL 342 -9.994 26.801 -5.537 0.00 0.00 C ATOM 343 CA ARG 343 -8.063 26.793 -3.938 0.00 0.00 C ATOM 344 CA TYR 344 -8.585 28.183 -0.748 0.00 0.00 C ATOM 345 CA VAL 345 -6.712 27.414 2.203 0.00 0.00 C ATOM 346 CA LEU 346 -6.958 28.221 5.774 0.00 0.00 C ATOM 347 CA GLN 347 -6.210 24.995 7.781 0.00 0.00 C ATOM 348 CA LEU 348 -5.698 21.512 7.590 0.00 0.00 C ATOM 349 CA THR 349 -3.152 19.995 8.636 0.00 0.00 C ATOM 350 CA LYS 350 -3.012 22.318 5.546 0.00 0.00 C ATOM 351 CA PRO 351 -4.228 21.175 3.438 0.00 0.00 C ATOM 352 CA LEU 352 -2.223 17.289 4.724 0.00 0.00 C ATOM 353 CA ASP 353 -0.257 17.978 4.183 0.00 0.00 C ATOM 354 CA GLU 354 -1.467 20.149 0.554 0.00 0.00 C ATOM 355 CA ILE 355 -1.578 17.118 -0.242 0.00 0.00 C ATOM 356 CA LEU 356 1.051 14.438 0.595 0.00 0.00 C ATOM 357 CA GLU 357 1.375 17.163 -1.932 0.00 0.00 C ATOM 358 CA GLU 358 -0.403 17.373 -5.015 0.00 0.00 C ATOM 359 CA MET 359 0.764 13.471 -4.576 0.00 0.00 C ATOM 360 CA LYS 360 3.170 12.487 -4.537 0.00 0.00 C ATOM 361 CA ALA 361 2.129 15.126 -8.591 0.00 0.00 C ATOM 362 CA ALA 362 0.358 14.100 -10.569 0.00 0.00 C ATOM 363 CA ASP 363 2.185 10.057 -9.188 0.00 0.00 C ATOM 364 CA LYS 364 0.761 8.600 -9.572 0.00 0.00 C ATOM 365 CA ILE 365 1.740 5.024 -9.942 0.00 0.00 C ATOM 366 CA GLU 366 -0.022 5.498 -8.703 0.00 0.00 C ATOM 367 CA GLU 367 -0.871 7.161 -5.599 0.00 0.00 C ATOM 368 CA ASN 368 -3.854 7.547 -6.501 0.00 0.00 C ATOM 369 CA ALA 369 -5.549 7.969 -3.544 0.00 0.00 C ATOM 370 CA PRO 370 -9.086 7.430 -3.496 0.00 0.00 C ATOM 371 CA PHE 371 -8.409 5.167 0.533 0.00 0.00 C ATOM 372 CA GLY 372 -4.513 6.145 1.889 0.00 0.00 C ATOM 373 CA GLU 373 -3.190 2.725 3.648 0.00 0.00 C ATOM 374 CA ASP 374 -5.854 3.312 6.528 0.00 0.00 C ATOM 375 CA PHE 375 -6.439 7.445 6.170 0.00 0.00 C ATOM 376 CA ILE 376 -4.645 9.758 4.304 0.00 0.00 C ATOM 377 CA PHE 377 -1.686 7.422 5.096 0.00 0.00 C ATOM 378 CA ASP 378 -4.926 7.839 8.541 0.00 0.00 C ATOM 379 CA SER 379 -2.369 6.253 8.345 0.00 0.00 C ATOM 380 CA TRP 380 -4.194 9.845 8.856 0.00 0.00 C ATOM 381 CA LEU 381 -2.265 10.873 7.392 0.00 0.00 C ATOM 382 CA SER 382 -0.536 8.079 9.495 0.00 0.00 C ATOM 383 CA ASP 383 -2.408 8.798 12.575 0.00 0.00 C ATOM 384 CA THR 384 -3.328 12.591 11.840 0.00 0.00 C ATOM 385 CA ASN 385 -0.933 12.092 11.200 0.00 0.00 C ATOM 386 CA LYS 386 -1.048 9.575 14.550 0.00 0.00 C ATOM 387 CA LYS 387 -3.291 12.455 16.069 0.00 0.00 C ATOM 388 CA LEU 388 -2.661 15.302 14.366 0.00 0.00 C ATOM 389 CA ILE 389 -3.550 14.068 18.428 0.00 0.00 C ATOM 390 CA GLN 390 -4.212 13.142 19.820 0.00 0.00 C ATOM 391 CA ASN 391 -5.053 12.252 21.798 0.00 0.00 C ATOM 392 CA THR 392 -5.277 11.938 22.032 0.00 0.00 C ATOM 393 CA TYR 393 -6.110 12.215 23.823 0.00 0.00 C ATOM 394 CA GLY 394 -8.529 13.620 27.282 0.00 0.00 C ATOM 395 CA THR 395 -10.643 14.028 28.871 0.00 0.00 C ATOM 396 CA GLY 396 -11.371 14.211 29.649 0.00 0.00 C ATOM 397 CA TYR 397 -11.858 14.361 30.176 0.00 0.00 C ATOM 398 CA TYR 398 -14.112 16.074 33.802 0.00 0.00 C ATOM 399 CA TYR 399 -14.896 16.471 34.638 0.00 0.00 C ATOM 400 CA LEU 400 -15.209 16.202 34.812 0.00 0.00 C ATOM 401 CA GLN 401 -15.956 16.567 35.623 0.00 0.00 C ATOM 402 CA ASP 402 -18.419 17.923 38.232 0.00 0.00 C TER END