####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name S0953s2TS492_5-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name S0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap S0953s2TS492_5-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 22 23 - 44 4.88 12.98 LCS_AVERAGE: 47.78 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 9 - 20 1.87 13.02 LCS_AVERAGE: 19.63 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 7 10 - 16 0.92 14.21 LONGEST_CONTINUOUS_SEGMENT: 7 11 - 17 0.75 13.67 LONGEST_CONTINUOUS_SEGMENT: 7 13 - 19 0.93 13.26 LONGEST_CONTINUOUS_SEGMENT: 7 14 - 20 0.87 12.85 LCS_AVERAGE: 10.64 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 3 20 3 3 4 4 6 13 13 14 16 17 18 18 19 20 22 23 25 27 28 29 LCS_GDT V 3 V 3 3 6 20 3 4 6 8 10 13 13 14 16 17 18 18 19 20 22 23 25 27 28 29 LCS_GDT Q 4 Q 4 5 6 20 3 5 5 6 6 13 13 14 16 17 18 18 19 20 22 23 25 27 28 29 LCS_GDT G 5 G 5 5 6 20 0 5 5 6 6 8 9 12 13 16 17 18 20 21 22 23 24 27 28 29 LCS_GDT P 6 P 6 5 6 20 3 5 5 6 6 9 12 12 15 16 17 18 18 20 22 23 24 26 28 28 LCS_GDT W 7 W 7 5 6 20 3 5 5 6 6 7 8 12 14 16 17 18 18 20 22 23 25 27 28 29 LCS_GDT V 8 V 8 5 6 20 3 5 5 8 10 13 13 15 16 17 18 19 20 21 22 23 25 27 28 29 LCS_GDT G 9 G 9 4 12 20 3 4 6 8 11 13 13 15 16 17 18 19 20 21 22 23 25 27 28 29 LCS_GDT S 10 S 10 7 12 20 3 3 5 7 8 11 12 13 15 16 18 19 20 21 22 23 25 27 28 28 LCS_GDT S 11 S 11 7 12 20 4 6 8 10 11 12 12 15 15 16 17 19 20 21 22 23 24 26 28 28 LCS_GDT Y 12 Y 12 7 12 20 4 6 8 10 11 12 12 15 15 16 17 19 20 21 22 23 25 26 28 28 LCS_GDT V 13 V 13 7 12 20 4 6 8 10 11 12 12 15 15 16 17 19 20 21 22 23 25 26 28 28 LCS_GDT A 14 A 14 7 12 20 4 6 8 10 11 12 12 15 15 16 17 19 20 21 22 23 24 26 28 28 LCS_GDT E 15 E 15 7 12 20 3 6 8 10 11 12 12 15 15 16 17 19 20 21 22 23 24 26 28 28 LCS_GDT T 16 T 16 7 12 20 3 6 8 10 11 12 12 15 15 16 17 19 20 21 22 23 24 26 28 28 LCS_GDT G 17 G 17 7 12 20 3 5 8 10 11 12 12 15 15 16 17 19 20 21 22 23 24 26 28 28 LCS_GDT Q 18 Q 18 7 12 20 3 5 7 10 11 12 12 15 15 16 17 19 20 21 22 23 24 26 28 28 LCS_GDT N 19 N 19 7 12 20 3 5 7 10 11 12 12 15 15 16 17 19 20 21 25 25 25 26 28 28 LCS_GDT W 20 W 20 7 12 20 0 4 8 10 11 12 12 15 15 16 17 21 22 24 25 25 25 26 28 28 LCS_GDT A 21 A 21 3 9 20 3 3 3 4 5 8 12 15 15 16 18 21 22 24 25 25 25 26 28 28 LCS_GDT S 22 S 22 3 5 20 3 3 3 4 4 6 9 15 15 16 17 19 20 21 22 23 24 26 28 28 LCS_GDT L 23 L 23 4 5 22 3 3 4 4 4 5 8 9 12 14 17 19 20 24 25 25 25 26 28 28 LCS_GDT A 24 A 24 4 6 22 3 3 4 4 5 6 8 8 12 15 18 21 22 24 25 25 25 26 28 29 LCS_GDT A 25 A 25 4 6 22 3 3 5 7 7 7 8 8 11 14 17 20 22 24 25 25 25 26 28 29 LCS_GDT N 26 N 26 4 6 22 3 4 5 7 7 7 8 11 14 17 18 21 22 24 25 25 25 27 28 29 LCS_GDT E 27 E 27 4 6 22 3 4 5 7 10 10 12 16 16 17 18 21 22 24 25 25 25 27 28 29 LCS_GDT L 28 L 28 5 11 22 3 5 6 8 10 11 12 16 16 17 18 21 22 24 25 25 25 27 28 29 LCS_GDT R 29 R 29 5 11 22 3 5 6 8 10 13 13 16 16 17 18 21 22 24 25 25 25 27 28 29 LCS_GDT V 30 V 30 5 11 22 3 5 7 8 10 13 13 16 16 17 18 21 22 24 25 25 25 27 27 29 LCS_GDT T 31 T 31 5 11 22 3 5 6 8 10 13 13 16 16 17 18 21 22 24 25 25 25 27 27 29 LCS_GDT E 32 E 32 5 11 22 3 5 7 8 10 13 13 16 16 17 18 21 22 24 25 25 25 27 27 29 LCS_GDT R 33 R 33 4 11 22 3 4 7 8 10 13 13 16 16 17 18 21 22 24 25 25 25 27 27 29 LCS_GDT P 34 P 34 4 11 22 2 4 7 8 10 13 13 16 16 17 18 21 22 24 25 25 25 27 27 29 LCS_GDT F 35 F 35 4 11 22 3 3 6 8 10 13 13 16 16 17 18 21 22 24 25 25 25 27 27 29 LCS_GDT W 36 W 36 4 11 22 3 4 7 8 10 13 13 16 16 17 18 21 22 24 25 25 25 27 27 29 LCS_GDT I 37 I 37 3 11 22 3 4 7 8 10 11 12 16 16 17 18 21 22 24 25 25 25 27 27 29 LCS_GDT S 38 S 38 3 11 22 1 3 7 8 10 11 12 16 16 17 18 21 22 24 25 25 25 27 27 29 LCS_GDT S 39 S 39 3 4 22 0 3 4 7 7 7 11 16 16 17 18 21 22 24 25 25 25 27 27 29 LCS_GDT F 40 F 40 3 5 22 3 4 4 7 7 9 12 16 16 17 18 21 22 24 25 25 25 27 27 29 LCS_GDT I 41 I 41 3 5 22 3 4 4 4 5 5 12 16 16 17 18 21 22 24 25 25 25 27 27 29 LCS_GDT G 42 G 42 3 5 22 3 4 4 4 5 8 12 16 16 17 18 21 22 24 25 25 25 27 27 29 LCS_GDT R 43 R 43 3 5 22 3 3 3 4 5 5 7 9 10 12 18 19 22 24 25 25 25 27 27 29 LCS_GDT S 44 S 44 3 5 22 3 3 3 4 5 5 7 9 10 13 18 21 22 24 25 25 25 27 27 29 LCS_GDT K 45 K 45 3 4 21 3 3 3 4 4 5 7 8 8 10 13 14 15 15 17 19 20 25 26 29 LCS_AVERAGE LCS_A: 26.02 ( 10.64 19.63 47.78 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 6 8 10 11 13 13 16 16 17 18 21 22 24 25 25 25 27 28 29 GDT PERCENT_AT 9.09 13.64 18.18 22.73 25.00 29.55 29.55 36.36 36.36 38.64 40.91 47.73 50.00 54.55 56.82 56.82 56.82 61.36 63.64 65.91 GDT RMS_LOCAL 0.10 0.54 0.96 1.24 1.49 2.21 2.21 2.94 2.94 3.34 3.53 4.75 4.69 5.17 5.44 5.44 5.44 5.80 6.24 6.59 GDT RMS_ALL_AT 14.27 13.94 13.21 13.10 12.94 12.24 12.24 12.48 12.48 12.50 11.79 12.91 12.93 13.32 13.14 13.14 13.14 11.67 12.58 11.90 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 27 E 27 # possible swapping detected: F 35 F 35 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 11.124 0 0.049 0.058 11.392 0.000 0.000 - LGA V 3 V 3 9.108 0 0.661 1.159 12.107 0.000 0.000 5.421 LGA Q 4 Q 4 12.812 0 0.561 0.960 14.962 0.000 0.000 14.943 LGA G 5 G 5 15.860 0 0.519 0.519 18.824 0.000 0.000 - LGA P 6 P 6 17.208 0 0.066 0.436 18.732 0.000 0.000 18.732 LGA W 7 W 7 13.920 0 0.431 0.510 20.013 0.000 0.000 20.013 LGA V 8 V 8 10.960 0 0.634 0.594 11.733 0.000 0.000 10.368 LGA G 9 G 9 12.069 0 0.165 0.165 14.983 0.000 0.000 - LGA S 10 S 10 15.983 0 0.419 0.595 17.540 0.000 0.000 16.775 LGA S 11 S 11 19.944 0 0.103 0.637 23.134 0.000 0.000 23.134 LGA Y 12 Y 12 14.938 0 0.060 1.236 16.377 0.000 0.000 10.665 LGA V 13 V 13 16.072 0 0.108 0.944 20.459 0.000 0.000 16.371 LGA A 14 A 14 23.209 0 0.058 0.057 26.306 0.000 0.000 - LGA E 15 E 15 23.591 0 0.135 1.463 25.093 0.000 0.000 24.981 LGA T 16 T 16 20.702 0 0.508 1.009 21.825 0.000 0.000 16.961 LGA G 17 G 17 24.555 0 0.206 0.206 25.339 0.000 0.000 - LGA Q 18 Q 18 20.536 0 0.040 1.469 21.271 0.000 0.000 21.210 LGA N 19 N 19 15.807 0 0.583 1.179 19.425 0.000 0.000 19.220 LGA W 20 W 20 13.601 0 0.140 1.075 14.290 0.000 0.000 11.673 LGA A 21 A 21 11.583 0 0.608 0.585 12.911 0.000 0.000 - LGA S 22 S 22 16.030 0 0.466 0.628 19.658 0.000 0.000 19.658 LGA L 23 L 23 13.887 0 0.612 0.587 17.858 0.000 0.000 15.585 LGA A 24 A 24 10.066 0 0.090 0.091 11.555 0.000 0.000 - LGA A 25 A 25 8.989 0 0.530 0.490 10.533 0.000 0.000 - LGA N 26 N 26 7.669 0 0.186 1.091 12.504 0.455 0.227 12.504 LGA E 27 E 27 3.784 0 0.076 1.303 10.231 28.636 12.727 10.231 LGA L 28 L 28 1.514 0 0.269 0.226 6.743 48.182 26.364 6.743 LGA R 29 R 29 3.787 0 0.113 1.514 13.516 20.455 7.438 13.516 LGA V 30 V 30 1.236 0 0.097 0.147 4.039 58.636 39.740 3.788 LGA T 31 T 31 2.457 0 0.686 0.587 6.350 59.091 34.026 5.467 LGA E 32 E 32 2.650 0 0.517 0.990 5.762 19.091 20.202 2.582 LGA R 33 R 33 3.035 0 0.565 1.443 13.075 37.273 14.050 12.431 LGA P 34 P 34 1.804 0 0.125 0.127 3.447 58.182 43.636 3.447 LGA F 35 F 35 3.021 0 0.429 1.197 7.369 36.364 13.388 7.369 LGA W 36 W 36 2.441 0 0.060 0.326 3.228 32.727 37.532 1.506 LGA I 37 I 37 1.556 0 0.668 1.006 4.225 39.545 33.864 4.225 LGA S 38 S 38 1.031 0 0.272 0.700 3.642 49.091 57.273 1.026 LGA S 39 S 39 4.347 0 0.651 0.797 8.741 13.636 9.091 8.741 LGA F 40 F 40 3.700 0 0.652 0.772 8.497 21.364 8.264 8.497 LGA I 41 I 41 3.837 0 0.214 0.678 5.518 6.818 6.364 4.413 LGA G 42 G 42 3.786 0 0.345 0.345 5.110 7.727 7.727 - LGA R 43 R 43 7.741 0 0.645 0.798 13.943 0.000 0.000 13.943 LGA S 44 S 44 9.502 0 0.068 0.622 12.055 0.000 0.000 9.984 LGA K 45 K 45 15.779 0 0.690 0.781 21.481 0.000 0.000 21.481 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 10.569 10.475 11.134 12.211 8.453 5.247 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 16 2.94 32.386 29.508 0.526 LGA_LOCAL RMSD: 2.939 Number of atoms: 16 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 12.485 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 10.569 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.419705 * X + 0.513753 * Y + 0.748268 * Z + 32.380581 Y_new = -0.705585 * X + 0.703254 * Y + -0.087083 * Z + 72.649193 Z_new = -0.570962 * X + -0.491417 * Y + 0.657656 * Z + -15.088583 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.034185 0.607678 -0.641723 [DEG: -59.2544 34.8174 -36.7680 ] ZXZ: 1.454938 0.853094 -2.281460 [DEG: 83.3618 48.8787 -130.7180 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: S0953s2TS492_5-D1 REMARK 2: S0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap S0953s2TS492_5-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 16 2.94 29.508 10.57 REMARK ---------------------------------------------------------- MOLECULE S0953s2TS492_5-D1 PFRMAT TS TARGET S0953s2 MODEL 5 REFINED PARENT N/A ATOM 525 N ALA 2 1.427 31.135 10.699 1.00 8.58 ATOM 526 CA ALA 2 0.735 32.244 10.016 1.00 8.58 ATOM 527 C ALA 2 1.239 32.486 8.570 1.00 8.58 ATOM 528 O ALA 2 2.316 32.033 8.188 1.00 8.58 ATOM 529 CB ALA 2 0.863 33.505 10.886 1.00 8.24 ATOM 530 N VAL 3 0.432 33.191 7.762 1.00 8.54 ATOM 531 CA VAL 3 0.621 33.484 6.317 1.00 8.54 ATOM 532 C VAL 3 0.531 32.275 5.356 1.00 8.54 ATOM 533 O VAL 3 0.535 32.455 4.140 1.00 8.54 ATOM 534 CB VAL 3 1.827 34.438 6.089 1.00 8.50 ATOM 535 CG1 VAL 3 3.118 33.799 5.555 1.00 8.50 ATOM 536 CG2 VAL 3 1.459 35.550 5.108 1.00 8.50 ATOM 537 N GLN 4 0.352 31.055 5.884 1.00 9.82 ATOM 538 CA GLN 4 0.160 29.797 5.133 1.00 9.82 ATOM 539 C GLN 4 -1.073 28.999 5.627 1.00 9.82 ATOM 540 O GLN 4 -1.106 27.767 5.561 1.00 9.82 ATOM 541 CB GLN 4 1.468 28.973 5.158 1.00 10.83 ATOM 542 CG GLN 4 2.648 29.599 4.390 1.00 10.83 ATOM 543 CD GLN 4 2.579 29.432 2.866 1.00 10.83 ATOM 544 OE1 GLN 4 1.583 29.028 2.275 1.00 10.83 ATOM 545 NE2 GLN 4 3.655 29.720 2.161 1.00 10.83 ATOM 546 N GLY 5 -2.097 29.697 6.144 1.00 9.37 ATOM 547 CA GLY 5 -3.357 29.087 6.607 1.00 9.37 ATOM 548 C GLY 5 -4.250 30.013 7.455 1.00 9.37 ATOM 549 O GLY 5 -5.353 30.341 7.013 1.00 9.37 ATOM 550 N PRO 6 -3.797 30.477 8.641 1.00 7.20 ATOM 551 CA PRO 6 -4.647 31.181 9.618 1.00 7.20 ATOM 552 C PRO 6 -5.291 32.514 9.177 1.00 7.20 ATOM 553 O PRO 6 -6.315 32.898 9.747 1.00 7.20 ATOM 554 CB PRO 6 -3.759 31.380 10.851 1.00 7.24 ATOM 555 CG PRO 6 -2.803 30.195 10.791 1.00 7.24 ATOM 556 CD PRO 6 -2.568 30.030 9.292 1.00 7.24 ATOM 557 N TRP 7 -4.721 33.219 8.186 1.00 6.17 ATOM 558 CA TRP 7 -5.250 34.500 7.659 1.00 6.17 ATOM 559 C TRP 7 -5.726 34.424 6.190 1.00 6.17 ATOM 560 O TRP 7 -6.598 35.194 5.782 1.00 6.17 ATOM 561 CB TRP 7 -4.181 35.599 7.813 1.00 4.36 ATOM 562 CG TRP 7 -3.695 35.912 9.204 1.00 4.36 ATOM 563 CD1 TRP 7 -2.842 35.150 9.927 1.00 4.36 ATOM 564 CD2 TRP 7 -3.975 37.084 10.042 1.00 4.36 ATOM 565 NE1 TRP 7 -2.574 35.755 11.139 1.00 4.36 ATOM 566 CE2 TRP 7 -3.226 36.962 11.255 1.00 4.36 ATOM 567 CE3 TRP 7 -4.744 38.260 9.888 1.00 4.36 ATOM 568 CZ2 TRP 7 -3.231 37.950 12.251 1.00 4.36 ATOM 569 CZ3 TRP 7 -4.766 39.250 10.893 1.00 4.36 ATOM 570 CH2 TRP 7 -4.008 39.103 12.067 1.00 4.36 ATOM 571 N VAL 8 -5.161 33.518 5.380 1.00 8.21 ATOM 572 CA VAL 8 -5.467 33.368 3.940 1.00 8.21 ATOM 573 C VAL 8 -6.794 32.630 3.737 1.00 8.21 ATOM 574 O VAL 8 -6.976 31.519 4.232 1.00 8.21 ATOM 575 CB VAL 8 -4.323 32.640 3.199 1.00 8.64 ATOM 576 CG1 VAL 8 -4.643 32.364 1.722 1.00 8.64 ATOM 577 CG2 VAL 8 -3.053 33.495 3.212 1.00 8.64 ATOM 578 N GLY 9 -7.720 33.237 2.987 1.00 10.50 ATOM 579 CA GLY 9 -9.018 32.660 2.593 1.00 10.50 ATOM 580 C GLY 9 -10.066 32.565 3.715 1.00 10.50 ATOM 581 O GLY 9 -11.262 32.710 3.450 1.00 10.50 ATOM 582 N SER 10 -9.636 32.396 4.970 1.00 9.05 ATOM 583 CA SER 10 -10.464 32.382 6.189 1.00 9.05 ATOM 584 C SER 10 -10.929 33.792 6.604 1.00 9.05 ATOM 585 O SER 10 -10.612 34.280 7.689 1.00 9.05 ATOM 586 CB SER 10 -9.712 31.664 7.324 1.00 8.24 ATOM 587 OG SER 10 -9.426 30.320 6.953 1.00 8.24 ATOM 588 N SER 11 -11.665 34.458 5.707 1.00 8.09 ATOM 589 CA SER 11 -12.323 35.778 5.821 1.00 8.09 ATOM 590 C SER 11 -11.439 37.016 6.051 1.00 8.09 ATOM 591 O SER 11 -11.806 38.101 5.602 1.00 8.09 ATOM 592 CB SER 11 -13.460 35.733 6.853 1.00 7.99 ATOM 593 OG SER 11 -14.452 34.793 6.459 1.00 7.99 ATOM 594 N TYR 12 -10.272 36.913 6.691 1.00 6.11 ATOM 595 CA TYR 12 -9.453 38.086 7.045 1.00 6.11 ATOM 596 C TYR 12 -8.870 38.801 5.811 1.00 6.11 ATOM 597 O TYR 12 -8.886 40.031 5.746 1.00 6.11 ATOM 598 CB TYR 12 -8.368 37.667 8.049 1.00 5.94 ATOM 599 CG TYR 12 -8.837 37.122 9.400 1.00 5.94 ATOM 600 CD1 TYR 12 -10.184 37.204 9.826 1.00 5.94 ATOM 601 CD2 TYR 12 -7.881 36.550 10.263 1.00 5.94 ATOM 602 CE1 TYR 12 -10.569 36.703 11.085 1.00 5.94 ATOM 603 CE2 TYR 12 -8.258 36.061 11.529 1.00 5.94 ATOM 604 CZ TYR 12 -9.605 36.132 11.943 1.00 5.94 ATOM 605 OH TYR 12 -9.965 35.646 13.165 1.00 5.94 ATOM 606 N VAL 13 -8.449 38.052 4.779 1.00 6.37 ATOM 607 CA VAL 13 -8.016 38.635 3.490 1.00 6.37 ATOM 608 C VAL 13 -9.171 39.288 2.706 1.00 6.37 ATOM 609 O VAL 13 -8.945 40.224 1.943 1.00 6.37 ATOM 610 CB VAL 13 -7.257 37.589 2.644 1.00 6.69 ATOM 611 CG1 VAL 13 -8.186 36.598 1.931 1.00 6.69 ATOM 612 CG2 VAL 13 -6.353 38.250 1.597 1.00 6.69 ATOM 613 N ALA 14 -10.426 38.863 2.906 1.00 7.67 ATOM 614 CA ALA 14 -11.581 39.477 2.237 1.00 7.67 ATOM 615 C ALA 14 -11.865 40.911 2.744 1.00 7.67 ATOM 616 O ALA 14 -12.335 41.759 1.983 1.00 7.67 ATOM 617 CB ALA 14 -12.800 38.561 2.397 1.00 8.12 ATOM 618 N GLU 15 -11.534 41.203 4.009 1.00 5.72 ATOM 619 CA GLU 15 -11.566 42.558 4.591 1.00 5.72 ATOM 620 C GLU 15 -10.300 43.390 4.284 1.00 5.72 ATOM 621 O GLU 15 -10.286 44.603 4.509 1.00 5.72 ATOM 622 CB GLU 15 -11.777 42.464 6.114 1.00 4.55 ATOM 623 CG GLU 15 -13.121 41.814 6.481 1.00 4.55 ATOM 624 CD GLU 15 -13.411 41.827 7.998 1.00 4.55 ATOM 625 OE1 GLU 15 -12.995 42.773 8.711 1.00 4.55 ATOM 626 OE2 GLU 15 -14.098 40.895 8.485 1.00 4.55 ATOM 627 N THR 16 -9.245 42.755 3.760 1.00 5.22 ATOM 628 CA THR 16 -7.906 43.331 3.544 1.00 5.22 ATOM 629 C THR 16 -7.455 43.071 2.103 1.00 5.22 ATOM 630 O THR 16 -6.762 42.094 1.825 1.00 5.22 ATOM 631 CB THR 16 -6.904 42.763 4.572 1.00 4.51 ATOM 632 OG1 THR 16 -7.337 43.037 5.887 1.00 4.51 ATOM 633 CG2 THR 16 -5.509 43.375 4.434 1.00 4.51 ATOM 634 N GLY 17 -7.876 43.937 1.172 1.00 7.32 ATOM 635 CA GLY 17 -7.747 43.773 -0.290 1.00 7.32 ATOM 636 C GLY 17 -6.329 43.913 -0.874 1.00 7.32 ATOM 637 O GLY 17 -6.143 44.584 -1.892 1.00 7.32 ATOM 638 N GLN 18 -5.333 43.306 -0.228 1.00 8.37 ATOM 639 CA GLN 18 -3.917 43.278 -0.609 1.00 8.37 ATOM 640 C GLN 18 -3.230 41.999 -0.080 1.00 8.37 ATOM 641 O GLN 18 -3.594 41.482 0.978 1.00 8.37 ATOM 642 CB GLN 18 -3.222 44.577 -0.153 1.00 8.85 ATOM 643 CG GLN 18 -3.312 44.933 1.348 1.00 8.85 ATOM 644 CD GLN 18 -2.202 44.340 2.226 1.00 8.85 ATOM 645 OE1 GLN 18 -1.096 44.062 1.791 1.00 8.85 ATOM 646 NE2 GLN 18 -2.445 44.182 3.510 1.00 8.85 ATOM 647 N ASN 19 -2.280 41.461 -0.855 1.00 7.69 ATOM 648 CA ASN 19 -1.628 40.160 -0.609 1.00 7.69 ATOM 649 C ASN 19 -0.496 40.236 0.451 1.00 7.69 ATOM 650 O ASN 19 -0.318 41.254 1.114 1.00 7.69 ATOM 651 CB ASN 19 -1.150 39.587 -1.964 1.00 8.18 ATOM 652 CG ASN 19 -2.242 39.569 -3.025 1.00 8.18 ATOM 653 OD1 ASN 19 -3.263 38.906 -2.890 1.00 8.18 ATOM 654 ND2 ASN 19 -2.079 40.303 -4.105 1.00 8.18 ATOM 655 N TRP 20 0.273 39.154 0.629 1.00 5.60 ATOM 656 CA TRP 20 1.401 39.043 1.578 1.00 5.60 ATOM 657 C TRP 20 2.232 37.765 1.310 1.00 5.60 ATOM 658 O TRP 20 1.756 36.863 0.614 1.00 5.60 ATOM 659 CB TRP 20 0.850 39.044 3.020 1.00 3.73 ATOM 660 CG TRP 20 -0.378 38.210 3.263 1.00 3.73 ATOM 661 CD1 TRP 20 -0.504 36.901 2.959 1.00 3.73 ATOM 662 CD2 TRP 20 -1.677 38.609 3.813 1.00 3.73 ATOM 663 NE1 TRP 20 -1.744 36.449 3.341 1.00 3.73 ATOM 664 CE2 TRP 20 -2.513 37.454 3.880 1.00 3.73 ATOM 665 CE3 TRP 20 -2.246 39.824 4.255 1.00 3.73 ATOM 666 CZ2 TRP 20 -3.816 37.484 4.395 1.00 3.73 ATOM 667 CZ3 TRP 20 -3.556 39.872 4.773 1.00 3.73 ATOM 668 CH2 TRP 20 -4.338 38.705 4.857 1.00 3.73 ATOM 669 N ALA 21 3.453 37.662 1.861 1.00 6.56 ATOM 670 CA ALA 21 4.289 36.447 1.789 1.00 6.56 ATOM 671 C ALA 21 5.465 36.408 2.799 1.00 6.56 ATOM 672 O ALA 21 5.901 37.440 3.313 1.00 6.56 ATOM 673 CB ALA 21 4.849 36.313 0.360 1.00 7.05 ATOM 674 N SER 22 5.993 35.197 3.034 1.00 6.06 ATOM 675 CA SER 22 7.266 34.891 3.727 1.00 6.06 ATOM 676 C SER 22 7.456 35.483 5.138 1.00 6.06 ATOM 677 O SER 22 8.428 36.199 5.392 1.00 6.06 ATOM 678 CB SER 22 8.454 35.220 2.804 1.00 6.11 ATOM 679 OG SER 22 8.314 34.567 1.547 1.00 6.11 ATOM 680 N LEU 23 6.545 35.170 6.073 1.00 5.96 ATOM 681 CA LEU 23 6.576 35.657 7.466 1.00 5.96 ATOM 682 C LEU 23 6.849 34.527 8.479 1.00 5.96 ATOM 683 O LEU 23 6.087 33.562 8.562 1.00 5.96 ATOM 684 CB LEU 23 5.261 36.394 7.804 1.00 6.06 ATOM 685 CG LEU 23 4.834 37.494 6.812 1.00 6.06 ATOM 686 CD1 LEU 23 3.583 38.203 7.336 1.00 6.06 ATOM 687 CD2 LEU 23 5.917 38.546 6.602 1.00 6.06 ATOM 688 N ALA 24 7.914 34.668 9.278 1.00 7.50 ATOM 689 CA ALA 24 8.286 33.717 10.338 1.00 7.50 ATOM 690 C ALA 24 7.642 34.015 11.713 1.00 7.50 ATOM 691 O ALA 24 7.485 33.109 12.531 1.00 7.50 ATOM 692 CB ALA 24 9.819 33.710 10.439 1.00 7.82 ATOM 693 N ALA 25 7.289 35.278 11.992 1.00 7.13 ATOM 694 CA ALA 25 6.866 35.754 13.315 1.00 7.13 ATOM 695 C ALA 25 5.359 35.543 13.600 1.00 7.13 ATOM 696 O ALA 25 4.567 36.488 13.608 1.00 7.13 ATOM 697 CB ALA 25 7.310 37.219 13.457 1.00 7.08 ATOM 698 N ASN 26 4.959 34.297 13.878 1.00 8.32 ATOM 699 CA ASN 26 3.588 33.932 14.283 1.00 8.32 ATOM 700 C ASN 26 3.228 34.292 15.746 1.00 8.32 ATOM 701 O ASN 26 2.085 34.114 16.165 1.00 8.32 ATOM 702 CB ASN 26 3.383 32.426 14.019 1.00 9.11 ATOM 703 CG ASN 26 4.266 31.528 14.881 1.00 9.11 ATOM 704 OD1 ASN 26 5.425 31.294 14.580 1.00 9.11 ATOM 705 ND2 ASN 26 3.751 30.983 15.960 1.00 9.11 ATOM 706 N GLU 27 4.194 34.760 16.541 1.00 8.66 ATOM 707 CA GLU 27 4.080 34.933 18.002 1.00 8.66 ATOM 708 C GLU 27 3.254 36.155 18.463 1.00 8.66 ATOM 709 O GLU 27 2.878 36.227 19.636 1.00 8.66 ATOM 710 CB GLU 27 5.500 35.000 18.593 1.00 9.48 ATOM 711 CG GLU 27 6.236 33.652 18.468 1.00 9.48 ATOM 712 CD GLU 27 7.710 33.699 18.922 1.00 9.48 ATOM 713 OE1 GLU 27 8.143 34.660 19.604 1.00 9.48 ATOM 714 OE2 GLU 27 8.461 32.748 18.595 1.00 9.48 ATOM 715 N LEU 28 2.970 37.115 17.572 1.00 6.04 ATOM 716 CA LEU 28 2.374 38.425 17.895 1.00 6.04 ATOM 717 C LEU 28 1.117 38.711 17.046 1.00 6.04 ATOM 718 O LEU 28 1.048 39.682 16.288 1.00 6.04 ATOM 719 CB LEU 28 3.460 39.516 17.784 1.00 4.90 ATOM 720 CG LEU 28 4.640 39.378 18.768 1.00 4.90 ATOM 721 CD1 LEU 28 5.756 40.335 18.350 1.00 4.90 ATOM 722 CD2 LEU 28 4.230 39.698 20.208 1.00 4.90 ATOM 723 N ARG 29 0.116 37.829 17.167 1.00 4.60 ATOM 724 CA ARG 29 -1.153 37.791 16.404 1.00 4.60 ATOM 725 C ARG 29 -2.169 38.881 16.829 1.00 4.60 ATOM 726 O ARG 29 -3.318 38.586 17.163 1.00 4.60 ATOM 727 CB ARG 29 -1.701 36.350 16.518 1.00 6.65 ATOM 728 CG ARG 29 -2.700 35.949 15.419 1.00 6.65 ATOM 729 CD ARG 29 -3.265 34.558 15.731 1.00 6.65 ATOM 730 NE ARG 29 -4.219 34.096 14.701 1.00 6.65 ATOM 731 CZ ARG 29 -4.987 33.022 14.781 1.00 6.65 ATOM 732 NH1 ARG 29 -5.805 32.716 13.815 1.00 6.65 ATOM 733 NH2 ARG 29 -4.961 32.228 15.816 1.00 6.65 ATOM 734 N VAL 30 -1.737 40.144 16.867 1.00 3.00 ATOM 735 CA VAL 30 -2.545 41.312 17.285 1.00 3.00 ATOM 736 C VAL 30 -3.735 41.567 16.341 1.00 3.00 ATOM 737 O VAL 30 -3.589 41.514 15.118 1.00 3.00 ATOM 738 CB VAL 30 -1.651 42.569 17.411 1.00 2.14 ATOM 739 CG1 VAL 30 -2.431 43.881 17.589 1.00 2.14 ATOM 740 CG2 VAL 30 -0.721 42.425 18.624 1.00 2.14 ATOM 741 N THR 31 -4.898 41.895 16.916 1.00 3.70 ATOM 742 CA THR 31 -6.148 42.259 16.214 1.00 3.70 ATOM 743 C THR 31 -6.867 43.418 16.925 1.00 3.70 ATOM 744 O THR 31 -6.799 43.555 18.149 1.00 3.70 ATOM 745 CB THR 31 -7.109 41.059 16.073 1.00 4.61 ATOM 746 OG1 THR 31 -7.475 40.545 17.341 1.00 4.61 ATOM 747 CG2 THR 31 -6.519 39.914 15.246 1.00 4.61 ATOM 748 N GLU 32 -7.544 44.282 16.154 1.00 5.38 ATOM 749 CA GLU 32 -8.129 45.559 16.625 1.00 5.38 ATOM 750 C GLU 32 -9.487 45.867 15.943 1.00 5.38 ATOM 751 O GLU 32 -9.823 47.030 15.711 1.00 5.38 ATOM 752 CB GLU 32 -7.111 46.708 16.421 1.00 6.83 ATOM 753 CG GLU 32 -5.777 46.522 17.164 1.00 6.83 ATOM 754 CD GLU 32 -4.888 47.781 17.090 1.00 6.83 ATOM 755 OE1 GLU 32 -4.732 48.372 15.996 1.00 6.83 ATOM 756 OE2 GLU 32 -4.328 48.195 18.137 1.00 6.83 ATOM 757 N ARG 33 -10.267 44.808 15.654 1.00 6.25 ATOM 758 CA ARG 33 -11.471 44.703 14.788 1.00 6.25 ATOM 759 C ARG 33 -11.132 44.492 13.294 1.00 6.25 ATOM 760 O ARG 33 -11.430 43.395 12.820 1.00 6.25 ATOM 761 CB ARG 33 -12.607 45.704 15.110 1.00 6.39 ATOM 762 CG ARG 33 -13.332 45.345 16.421 1.00 6.39 ATOM 763 CD ARG 33 -14.329 46.421 16.882 1.00 6.39 ATOM 764 NE ARG 33 -15.439 46.645 15.928 1.00 6.39 ATOM 765 CZ ARG 33 -16.631 46.070 15.923 1.00 6.39 ATOM 766 NH1 ARG 33 -17.554 46.478 15.098 1.00 6.39 ATOM 767 NH2 ARG 33 -16.943 45.093 16.729 1.00 6.39 ATOM 768 N PRO 34 -10.480 45.407 12.544 1.00 5.27 ATOM 769 CA PRO 34 -9.954 45.086 11.210 1.00 5.27 ATOM 770 C PRO 34 -8.799 44.064 11.284 1.00 5.27 ATOM 771 O PRO 34 -7.889 44.203 12.107 1.00 5.27 ATOM 772 CB PRO 34 -9.515 46.423 10.595 1.00 5.48 ATOM 773 CG PRO 34 -10.340 47.452 11.366 1.00 5.48 ATOM 774 CD PRO 34 -10.370 46.839 12.762 1.00 5.48 ATOM 775 N PHE 35 -8.818 43.039 10.425 1.00 4.11 ATOM 776 CA PHE 35 -7.877 41.902 10.453 1.00 4.11 ATOM 777 C PHE 35 -6.719 42.043 9.437 1.00 4.11 ATOM 778 O PHE 35 -6.566 41.230 8.521 1.00 4.11 ATOM 779 CB PHE 35 -8.655 40.585 10.293 1.00 3.83 ATOM 780 CG PHE 35 -9.649 40.273 11.400 1.00 3.83 ATOM 781 CD1 PHE 35 -11.032 40.449 11.194 1.00 3.83 ATOM 782 CD2 PHE 35 -9.189 39.755 12.626 1.00 3.83 ATOM 783 CE1 PHE 35 -11.946 40.109 12.209 1.00 3.83 ATOM 784 CE2 PHE 35 -10.103 39.420 13.642 1.00 3.83 ATOM 785 CZ PHE 35 -11.481 39.597 13.434 1.00 3.83 ATOM 786 N TRP 36 -5.890 43.081 9.596 1.00 2.81 ATOM 787 CA TRP 36 -4.749 43.369 8.710 1.00 2.81 ATOM 788 C TRP 36 -3.471 42.567 9.027 1.00 2.81 ATOM 789 O TRP 36 -3.146 42.309 10.186 1.00 2.81 ATOM 790 CB TRP 36 -4.443 44.877 8.730 1.00 2.63 ATOM 791 CG TRP 36 -5.313 45.703 7.836 1.00 2.63 ATOM 792 CD1 TRP 36 -6.603 46.024 8.074 1.00 2.63 ATOM 793 CD2 TRP 36 -5.004 46.250 6.515 1.00 2.63 ATOM 794 NE1 TRP 36 -7.123 46.706 6.992 1.00 2.63 ATOM 795 CE2 TRP 36 -6.190 46.844 5.986 1.00 2.63 ATOM 796 CE3 TRP 36 -3.844 46.300 5.705 1.00 2.63 ATOM 797 CZ2 TRP 36 -6.242 47.404 4.701 1.00 2.63 ATOM 798 CZ3 TRP 36 -3.879 46.897 4.428 1.00 2.63 ATOM 799 CH2 TRP 36 -5.077 47.427 3.918 1.00 2.63 ATOM 800 N ILE 37 -2.710 42.263 7.965 1.00 2.61 ATOM 801 CA ILE 37 -1.332 41.736 7.947 1.00 2.61 ATOM 802 C ILE 37 -0.587 42.425 6.786 1.00 2.61 ATOM 803 O ILE 37 -1.180 42.683 5.733 1.00 2.61 ATOM 804 CB ILE 37 -1.295 40.183 7.847 1.00 3.52 ATOM 805 CG1 ILE 37 -1.453 39.501 9.225 1.00 3.52 ATOM 806 CG2 ILE 37 -0.038 39.609 7.157 1.00 3.52 ATOM 807 CD1 ILE 37 -0.284 39.650 10.213 1.00 3.52 ATOM 808 N SER 38 0.711 42.695 6.975 1.00 2.66 ATOM 809 CA SER 38 1.616 43.150 5.903 1.00 2.66 ATOM 810 C SER 38 2.965 42.432 6.014 1.00 2.66 ATOM 811 O SER 38 3.257 41.560 5.196 1.00 2.66 ATOM 812 CB SER 38 1.790 44.681 5.869 1.00 2.79 ATOM 813 OG SER 38 0.541 45.353 5.931 1.00 2.79 ATOM 814 N SER 39 3.753 42.736 7.060 1.00 3.91 ATOM 815 CA SER 39 4.981 42.005 7.414 1.00 3.91 ATOM 816 C SER 39 5.545 42.388 8.792 1.00 3.91 ATOM 817 O SER 39 5.595 43.569 9.142 1.00 3.91 ATOM 818 CB SER 39 6.073 42.290 6.381 1.00 3.76 ATOM 819 OG SER 39 7.203 41.474 6.589 1.00 3.76 ATOM 820 N PHE 40 6.026 41.389 9.537 1.00 6.01 ATOM 821 CA PHE 40 6.827 41.524 10.762 1.00 6.01 ATOM 822 C PHE 40 7.916 40.443 10.713 1.00 6.01 ATOM 823 O PHE 40 7.605 39.262 10.541 1.00 6.01 ATOM 824 CB PHE 40 5.956 41.403 12.024 1.00 5.61 ATOM 825 CG PHE 40 4.929 42.508 12.198 1.00 5.61 ATOM 826 CD1 PHE 40 3.560 42.248 11.995 1.00 5.61 ATOM 827 CD2 PHE 40 5.343 43.800 12.574 1.00 5.61 ATOM 828 CE1 PHE 40 2.616 43.278 12.152 1.00 5.61 ATOM 829 CE2 PHE 40 4.399 44.833 12.718 1.00 5.61 ATOM 830 CZ PHE 40 3.037 44.574 12.496 1.00 5.61 ATOM 831 N ILE 41 9.187 40.838 10.830 1.00 7.58 ATOM 832 CA ILE 41 10.348 39.974 10.545 1.00 7.58 ATOM 833 C ILE 41 11.187 39.773 11.818 1.00 7.58 ATOM 834 O ILE 41 12.205 40.426 12.043 1.00 7.58 ATOM 835 CB ILE 41 11.113 40.526 9.314 1.00 7.33 ATOM 836 CG1 ILE 41 10.216 40.618 8.050 1.00 7.33 ATOM 837 CG2 ILE 41 12.369 39.705 8.972 1.00 7.33 ATOM 838 CD1 ILE 41 9.571 39.312 7.558 1.00 7.33 ATOM 839 N GLY 42 10.704 38.870 12.678 1.00 9.71 ATOM 840 CA GLY 42 11.319 38.529 13.967 1.00 9.71 ATOM 841 C GLY 42 12.532 37.602 13.845 1.00 9.71 ATOM 842 O GLY 42 13.673 38.033 14.022 1.00 9.71 ATOM 843 N ARG 43 12.278 36.313 13.570 1.00 10.72 ATOM 844 CA ARG 43 13.312 35.254 13.566 1.00 10.72 ATOM 845 C ARG 43 14.098 35.147 12.250 1.00 10.72 ATOM 846 O ARG 43 15.278 34.790 12.275 1.00 10.72 ATOM 847 CB ARG 43 12.677 33.900 13.937 1.00 11.11 ATOM 848 CG ARG 43 12.103 33.884 15.367 1.00 11.11 ATOM 849 CD ARG 43 11.623 32.475 15.747 1.00 11.11 ATOM 850 NE ARG 43 11.076 32.427 17.119 1.00 11.11 ATOM 851 CZ ARG 43 11.706 32.120 18.238 1.00 11.11 ATOM 852 NH1 ARG 43 11.023 32.058 19.341 1.00 11.11 ATOM 853 NH2 ARG 43 12.986 31.873 18.296 1.00 11.11 ATOM 854 N SER 44 13.464 35.436 11.110 1.00 11.07 ATOM 855 CA SER 44 14.093 35.372 9.774 1.00 11.07 ATOM 856 C SER 44 14.979 36.593 9.469 1.00 11.07 ATOM 857 O SER 44 14.838 37.651 10.089 1.00 11.07 ATOM 858 CB SER 44 13.023 35.198 8.686 1.00 11.12 ATOM 859 OG SER 44 13.620 34.955 7.418 1.00 11.12 ATOM 860 N LYS 45 15.883 36.445 8.489 1.00 11.24 ATOM 861 CA LYS 45 16.760 37.505 7.953 1.00 11.24 ATOM 862 C LYS 45 16.380 37.953 6.530 1.00 11.24 ATOM 863 O LYS 45 16.945 38.922 6.024 1.00 11.24 ATOM 864 CB LYS 45 18.230 37.052 8.058 1.00 12.42 ATOM 865 CG LYS 45 18.628 36.776 9.519 1.00 12.42 ATOM 866 CD LYS 45 20.100 36.368 9.661 1.00 12.42 ATOM 867 CE LYS 45 20.393 36.064 11.138 1.00 12.42 ATOM 868 NZ LYS 45 21.811 35.672 11.355 1.00 12.42 TER END