####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name S0953s2TS329_2-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name S0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap S0953s2TS329_2-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 21 13 - 33 4.79 14.69 LONGEST_CONTINUOUS_SEGMENT: 21 14 - 34 4.63 15.47 LONGEST_CONTINUOUS_SEGMENT: 21 15 - 35 4.70 16.32 LCS_AVERAGE: 42.56 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 16 - 25 1.95 13.57 LCS_AVERAGE: 15.13 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 7 17 - 23 0.94 13.46 LCS_AVERAGE: 10.74 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 6 13 3 3 5 5 7 8 8 8 9 11 15 15 15 16 18 18 22 23 24 25 LCS_GDT V 3 V 3 4 6 13 3 4 5 5 7 8 8 8 9 11 15 15 15 17 20 21 25 28 29 30 LCS_GDT Q 4 Q 4 5 6 13 3 4 5 5 7 8 8 10 11 11 15 15 16 17 20 21 25 28 29 31 LCS_GDT G 5 G 5 5 6 13 3 4 5 5 7 8 8 8 9 11 15 15 15 16 20 21 24 28 29 30 LCS_GDT P 6 P 6 5 6 13 3 4 5 5 7 8 8 10 11 12 15 15 18 20 22 23 25 28 29 30 LCS_GDT W 7 W 7 5 6 13 3 4 5 5 7 8 8 10 11 11 15 15 16 20 22 23 25 28 29 30 LCS_GDT V 8 V 8 5 6 13 3 4 5 5 6 7 8 10 11 12 15 15 16 20 22 23 25 28 29 30 LCS_GDT G 9 G 9 3 6 13 3 3 4 5 7 8 10 11 12 12 17 18 19 21 22 23 25 28 29 30 LCS_GDT S 10 S 10 3 3 15 3 3 5 5 5 8 10 11 12 12 17 18 19 21 22 23 25 28 29 30 LCS_GDT S 11 S 11 3 3 16 1 3 3 4 5 5 9 10 10 12 16 18 19 21 22 23 25 28 29 31 LCS_GDT Y 12 Y 12 3 3 16 1 3 3 4 4 6 9 10 11 13 16 17 19 21 22 24 26 28 29 31 LCS_GDT V 13 V 13 3 3 21 1 3 3 3 3 5 8 9 11 13 14 16 18 21 22 24 26 28 29 31 LCS_GDT A 14 A 14 3 3 21 3 4 5 6 7 7 10 10 11 12 14 18 19 22 23 24 26 28 29 31 LCS_GDT E 15 E 15 3 9 21 3 4 4 7 8 9 10 14 15 17 20 22 23 23 24 25 26 28 29 31 LCS_GDT T 16 T 16 6 10 21 3 4 7 9 11 13 14 15 17 18 20 22 23 23 24 25 26 28 29 31 LCS_GDT G 17 G 17 7 10 21 3 4 7 9 11 13 14 15 17 18 20 22 23 23 24 25 26 28 29 31 LCS_GDT Q 18 Q 18 7 10 21 3 4 7 9 11 13 14 15 17 18 20 22 23 23 24 25 26 28 29 31 LCS_GDT N 19 N 19 7 10 21 5 5 7 9 11 13 14 15 17 18 20 22 23 23 24 25 26 28 29 31 LCS_GDT W 20 W 20 7 10 21 5 5 7 9 11 13 14 15 17 18 20 22 23 23 24 25 26 28 29 31 LCS_GDT A 21 A 21 7 10 21 5 5 7 8 11 13 14 15 17 18 20 22 23 23 24 25 26 28 29 31 LCS_GDT S 22 S 22 7 10 21 5 5 7 8 10 12 14 15 17 18 20 22 23 23 24 25 26 28 29 31 LCS_GDT L 23 L 23 7 10 21 5 5 7 8 9 11 14 15 17 18 20 22 23 23 24 25 26 28 29 31 LCS_GDT A 24 A 24 4 10 21 3 3 5 6 7 9 10 14 15 16 19 22 23 23 24 25 26 28 29 31 LCS_GDT A 25 A 25 3 10 21 3 5 5 5 9 10 11 14 16 17 20 22 23 23 24 25 26 28 29 31 LCS_GDT N 26 N 26 3 6 21 3 5 5 5 6 6 9 15 17 18 20 22 23 23 24 25 26 28 29 31 LCS_GDT E 27 E 27 5 6 21 3 4 5 5 11 13 14 15 17 18 20 22 23 23 24 25 26 28 29 31 LCS_GDT L 28 L 28 5 6 21 3 4 5 9 11 13 14 15 17 18 20 22 23 23 24 25 26 28 29 31 LCS_GDT R 29 R 29 5 6 21 3 4 5 9 11 13 14 15 17 18 20 22 23 23 24 25 26 28 29 31 LCS_GDT V 30 V 30 5 6 21 3 4 5 9 11 13 14 16 17 18 20 22 23 23 24 25 26 28 29 31 LCS_GDT T 31 T 31 5 6 21 3 4 5 6 10 13 14 16 17 18 20 21 23 23 24 25 26 28 29 31 LCS_GDT E 32 E 32 3 6 21 3 3 5 9 11 13 14 16 17 18 20 22 23 23 24 25 26 28 29 31 LCS_GDT R 33 R 33 3 5 21 3 5 5 5 6 9 14 16 16 18 20 22 23 23 24 25 26 28 29 31 LCS_GDT P 34 P 34 3 5 21 3 5 5 7 7 10 14 16 16 16 18 19 20 23 24 25 26 28 29 31 LCS_GDT F 35 F 35 4 5 21 4 5 5 6 8 10 14 16 16 16 17 19 20 22 22 25 26 28 29 31 LCS_GDT W 36 W 36 4 5 19 4 4 4 6 8 10 14 16 16 16 17 19 20 21 22 23 25 28 29 31 LCS_GDT I 37 I 37 4 5 19 4 4 4 6 7 10 14 16 16 16 17 19 20 21 22 23 26 28 29 31 LCS_GDT S 38 S 38 4 5 19 4 4 4 6 8 10 14 16 16 16 17 19 20 21 22 23 26 28 29 31 LCS_GDT S 39 S 39 3 7 19 0 3 4 7 7 9 14 16 16 16 17 19 20 22 24 25 26 28 29 31 LCS_GDT F 40 F 40 6 7 19 3 5 6 7 7 9 10 16 16 16 17 22 23 23 24 25 26 28 29 31 LCS_GDT I 41 I 41 6 7 19 3 4 6 7 7 9 12 16 16 16 19 22 23 23 24 25 26 28 29 30 LCS_GDT G 42 G 42 6 7 19 3 5 6 6 6 10 14 16 16 17 20 22 23 23 24 25 26 28 29 30 LCS_GDT R 43 R 43 6 7 19 3 5 6 6 9 13 14 16 17 18 20 22 23 23 24 25 26 28 29 30 LCS_GDT S 44 S 44 6 7 19 3 5 6 6 6 10 14 16 17 18 19 20 21 22 22 23 25 28 29 30 LCS_GDT K 45 K 45 6 7 19 3 5 6 6 6 10 14 16 16 16 17 18 19 21 22 23 25 28 29 30 LCS_AVERAGE LCS_A: 22.81 ( 10.74 15.13 42.56 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 5 5 7 9 11 13 14 16 17 18 20 22 23 23 24 25 26 28 29 31 GDT PERCENT_AT 11.36 11.36 15.91 20.45 25.00 29.55 31.82 36.36 38.64 40.91 45.45 50.00 52.27 52.27 54.55 56.82 59.09 63.64 65.91 70.45 GDT RMS_LOCAL 0.36 0.36 0.94 1.43 1.72 2.04 2.20 2.93 2.74 2.93 3.58 4.23 4.26 4.26 4.60 4.84 5.20 6.17 6.40 6.97 GDT RMS_ALL_AT 13.74 13.74 13.46 16.55 17.04 17.05 17.11 14.31 17.49 17.51 16.31 15.30 15.30 15.30 15.31 14.99 14.95 13.29 12.15 11.09 # Checking swapping # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 18.280 0 0.073 0.102 19.886 0.000 0.000 - LGA V 3 V 3 14.889 0 0.055 1.131 17.435 0.000 0.000 14.694 LGA Q 4 Q 4 15.201 0 0.042 0.521 21.401 0.000 0.000 17.960 LGA G 5 G 5 14.883 0 0.147 0.147 15.792 0.000 0.000 - LGA P 6 P 6 13.555 0 0.033 0.122 14.915 0.000 0.000 14.464 LGA W 7 W 7 15.154 0 0.382 1.176 16.415 0.000 0.000 9.248 LGA V 8 V 8 13.037 0 0.624 1.411 13.808 0.000 0.000 13.808 LGA G 9 G 9 10.281 0 0.538 0.538 10.713 0.000 0.000 - LGA S 10 S 10 10.532 0 0.663 0.751 13.437 0.000 0.000 10.133 LGA S 11 S 11 10.082 0 0.619 0.576 12.052 0.000 0.000 9.187 LGA Y 12 Y 12 11.824 0 0.639 1.033 17.843 0.000 0.000 17.843 LGA V 13 V 13 15.496 0 0.615 0.707 19.311 0.000 0.000 17.603 LGA A 14 A 14 18.213 0 0.587 0.578 19.595 0.000 0.000 - LGA E 15 E 15 19.629 0 0.555 0.643 21.544 0.000 0.000 20.935 LGA T 16 T 16 19.977 0 0.146 0.240 23.503 0.000 0.000 18.668 LGA G 17 G 17 27.072 0 0.138 0.138 30.537 0.000 0.000 - LGA Q 18 Q 18 27.554 0 0.107 0.650 32.793 0.000 0.000 31.955 LGA N 19 N 19 27.950 0 0.071 1.008 32.571 0.000 0.000 32.571 LGA W 20 W 20 26.418 0 0.088 1.175 35.814 0.000 0.000 35.814 LGA A 21 A 21 19.741 0 0.126 0.121 22.414 0.000 0.000 - LGA S 22 S 22 20.149 0 0.118 0.148 24.307 0.000 0.000 24.307 LGA L 23 L 23 23.369 0 0.608 1.406 29.231 0.000 0.000 29.231 LGA A 24 A 24 19.595 0 0.586 0.558 21.185 0.000 0.000 - LGA A 25 A 25 13.559 0 0.369 0.362 15.366 0.000 0.000 - LGA N 26 N 26 16.500 0 0.207 1.414 20.099 0.000 0.000 15.912 LGA E 27 E 27 13.707 0 0.683 1.426 15.749 0.000 0.000 15.740 LGA L 28 L 28 7.503 0 0.660 1.113 9.318 0.000 1.591 4.233 LGA R 29 R 29 8.142 0 0.456 1.381 14.396 0.000 0.000 13.945 LGA V 30 V 30 2.444 0 0.177 1.120 4.413 25.000 24.416 2.586 LGA T 31 T 31 3.136 0 0.044 0.988 6.470 30.455 18.182 6.470 LGA E 32 E 32 2.845 0 0.618 1.122 5.686 23.636 10.909 5.686 LGA R 33 R 33 3.376 0 0.343 1.437 10.368 16.818 6.116 9.960 LGA P 34 P 34 2.801 0 0.714 0.640 4.979 30.455 18.701 4.979 LGA F 35 F 35 3.032 0 0.681 1.385 10.189 37.273 13.554 10.189 LGA W 36 W 36 1.827 0 0.660 1.049 10.414 39.545 19.481 10.414 LGA I 37 I 37 2.918 0 0.312 1.380 6.555 21.818 12.273 6.555 LGA S 38 S 38 2.382 0 0.668 0.580 4.121 30.000 27.576 3.410 LGA S 39 S 39 3.773 0 0.701 0.859 6.514 14.545 9.697 6.514 LGA F 40 F 40 4.184 0 0.642 1.564 14.208 20.000 7.273 14.208 LGA I 41 I 41 3.902 0 0.643 1.282 8.142 5.455 5.227 8.142 LGA G 42 G 42 2.793 0 0.098 0.098 2.908 32.727 32.727 - LGA R 43 R 43 2.052 0 0.032 1.248 8.358 51.818 22.314 8.358 LGA S 44 S 44 0.802 0 0.137 0.622 2.495 77.727 71.818 2.495 LGA K 45 K 45 2.844 0 0.060 0.881 9.850 28.636 13.333 9.746 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 10.643 10.617 11.525 11.043 7.163 2.597 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 16 2.93 31.250 28.494 0.528 LGA_LOCAL RMSD: 2.932 Number of atoms: 16 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 14.308 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 10.643 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.893775 * X + -0.257352 * Y + -0.367337 * Z + 24.558661 Y_new = -0.262532 * X + -0.363863 * Y + 0.893689 * Z + -14.075107 Z_new = -0.363653 * X + 0.895195 * Y + 0.257648 * Z + -12.607007 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.855894 0.372187 1.290558 [DEG: -163.6307 21.3247 73.9435 ] ZXZ: -2.751610 1.310209 -0.385864 [DEG: -157.6556 75.0695 -22.1084 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: S0953s2TS329_2-D1 REMARK 2: S0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap S0953s2TS329_2-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 16 2.93 28.494 10.64 REMARK ---------------------------------------------------------- MOLECULE S0953s2TS329_2-D1 PFRMAT TS TARGET S0953s2 MODEL 2 PARENT N/A ATOM 1026 N ALA 2 11.412 30.492 -2.818 1.00 0.00 N ATOM 1028 CA ALA 2 10.482 30.549 -3.956 1.00 0.00 C ATOM 1030 CB ALA 2 10.362 29.228 -4.550 1.00 0.00 C ATOM 1034 C ALA 2 9.072 31.057 -3.496 1.00 0.00 C ATOM 1035 O ALA 2 8.585 30.692 -2.421 1.00 0.00 O ATOM 1036 N VAL 3 8.439 31.960 -4.271 1.00 0.00 N ATOM 1038 CA VAL 3 7.097 32.617 -3.921 1.00 0.00 C ATOM 1040 CB VAL 3 7.217 34.070 -4.056 1.00 0.00 C ATOM 1042 CG1 VAL 3 7.645 34.641 -5.465 1.00 0.00 C ATOM 1046 CG2 VAL 3 5.978 34.772 -3.523 1.00 0.00 C ATOM 1050 C VAL 3 5.979 31.942 -4.729 1.00 0.00 C ATOM 1051 O VAL 3 6.070 31.923 -5.928 1.00 0.00 O ATOM 1052 N GLN 4 4.877 31.582 -4.042 1.00 0.00 N ATOM 1054 CA GLN 4 3.691 31.024 -4.766 1.00 0.00 C ATOM 1056 CB GLN 4 2.575 30.597 -3.752 1.00 0.00 C ATOM 1059 CG GLN 4 1.656 29.509 -4.392 1.00 0.00 C ATOM 1062 CD GLN 4 0.789 28.882 -3.376 1.00 0.00 C ATOM 1063 OE1 GLN 4 0.321 29.384 -2.368 1.00 0.00 O ATOM 1064 NE2 GLN 4 0.292 27.656 -3.716 1.00 0.00 N ATOM 1067 C GLN 4 3.097 32.152 -5.606 1.00 0.00 C ATOM 1068 O GLN 4 3.094 33.356 -5.285 1.00 0.00 O ATOM 1069 N GLY 5 2.478 31.717 -6.687 1.00 0.00 N ATOM 1071 CA GLY 5 2.079 32.607 -7.859 1.00 0.00 C ATOM 1074 C GLY 5 0.946 33.593 -7.850 1.00 0.00 C ATOM 1075 O GLY 5 0.222 33.659 -6.859 1.00 0.00 O ATOM 1076 N PRO 6 0.743 34.346 -8.966 1.00 0.00 N ATOM 1077 CD PRO 6 1.437 34.383 -10.315 1.00 0.00 C ATOM 1080 CG PRO 6 0.581 35.266 -11.185 1.00 0.00 C ATOM 1083 CB PRO 6 0.157 36.361 -10.192 1.00 0.00 C ATOM 1086 CA PRO 6 -0.138 35.526 -8.918 1.00 0.00 C ATOM 1088 C PRO 6 -1.616 35.172 -8.906 1.00 0.00 C ATOM 1089 O PRO 6 -2.431 36.143 -8.623 1.00 0.00 O ATOM 1090 N TRP 7 -1.982 33.937 -8.988 1.00 0.00 N ATOM 1092 CA TRP 7 -3.344 33.527 -8.809 1.00 0.00 C ATOM 1094 CB TRP 7 -3.458 32.142 -9.561 1.00 0.00 C ATOM 1097 CG TRP 7 -2.806 30.988 -9.094 1.00 0.00 C ATOM 1098 CD1 TRP 7 -3.363 30.071 -8.220 1.00 0.00 C ATOM 1100 NE1 TRP 7 -2.480 29.059 -7.953 1.00 0.00 N ATOM 1102 CE2 TRP 7 -1.257 29.233 -8.637 1.00 0.00 C ATOM 1103 CZ2 TRP 7 -0.097 28.402 -8.797 1.00 0.00 C ATOM 1105 CH2 TRP 7 0.955 28.736 -9.699 1.00 0.00 C ATOM 1107 CZ3 TRP 7 0.922 29.922 -10.366 1.00 0.00 C ATOM 1109 CE3 TRP 7 -0.253 30.697 -10.266 1.00 0.00 C ATOM 1111 CD2 TRP 7 -1.416 30.386 -9.409 1.00 0.00 C ATOM 1112 C TRP 7 -3.906 33.444 -7.340 1.00 0.00 C ATOM 1113 O TRP 7 -5.081 33.362 -7.141 1.00 0.00 O ATOM 1114 N VAL 8 -3.012 33.400 -6.341 1.00 0.00 N ATOM 1116 CA VAL 8 -3.317 33.537 -4.921 1.00 0.00 C ATOM 1118 CB VAL 8 -2.702 32.367 -4.103 1.00 0.00 C ATOM 1120 CG1 VAL 8 -3.235 30.991 -4.357 1.00 0.00 C ATOM 1124 CG2 VAL 8 -1.168 32.218 -4.192 1.00 0.00 C ATOM 1128 C VAL 8 -2.868 34.793 -4.293 1.00 0.00 C ATOM 1129 O VAL 8 -1.826 35.419 -4.666 1.00 0.00 O ATOM 1130 N GLY 9 -3.734 35.152 -3.357 1.00 0.00 N ATOM 1132 CA GLY 9 -3.641 36.388 -2.582 1.00 0.00 C ATOM 1135 C GLY 9 -2.842 36.105 -1.316 1.00 0.00 C ATOM 1136 O GLY 9 -2.860 34.989 -0.770 1.00 0.00 O ATOM 1137 N SER 10 -1.951 37.031 -0.930 1.00 0.00 N ATOM 1139 CA SER 10 -0.750 36.764 -0.113 1.00 0.00 C ATOM 1141 CB SER 10 0.483 36.769 -0.974 1.00 0.00 C ATOM 1144 OG SER 10 0.359 35.715 -1.918 1.00 0.00 O ATOM 1146 C SER 10 -0.508 37.773 1.038 1.00 0.00 C ATOM 1147 O SER 10 -1.191 38.840 0.984 1.00 0.00 O ATOM 1148 N SER 11 0.287 37.503 2.139 1.00 0.00 N ATOM 1150 CA SER 11 0.495 38.436 3.237 1.00 0.00 C ATOM 1152 CB SER 11 1.298 37.845 4.412 1.00 0.00 C ATOM 1155 OG SER 11 1.195 38.794 5.438 1.00 0.00 O ATOM 1157 C SER 11 1.143 39.746 2.761 1.00 0.00 C ATOM 1158 O SER 11 1.973 39.662 1.826 1.00 0.00 O ATOM 1159 N TYR 12 0.743 40.896 3.326 1.00 0.00 N ATOM 1161 CA TYR 12 1.390 42.175 3.149 1.00 0.00 C ATOM 1163 CB TYR 12 0.362 43.341 2.992 1.00 0.00 C ATOM 1166 CG TYR 12 0.821 44.650 2.405 1.00 0.00 C ATOM 1167 CD1 TYR 12 1.184 45.675 3.329 1.00 0.00 C ATOM 1169 CE1 TYR 12 1.690 46.797 2.679 1.00 0.00 C ATOM 1171 CZ TYR 12 2.052 46.937 1.276 1.00 0.00 C ATOM 1172 OH TYR 12 2.477 48.169 0.827 1.00 0.00 O ATOM 1174 CE2 TYR 12 1.622 45.920 0.426 1.00 0.00 C ATOM 1176 CD2 TYR 12 1.035 44.753 1.034 1.00 0.00 C ATOM 1178 C TYR 12 2.627 42.381 4.002 1.00 0.00 C ATOM 1179 O TYR 12 2.715 41.731 5.025 1.00 0.00 O ATOM 1180 N VAL 13 3.573 43.335 3.712 1.00 0.00 N ATOM 1182 CA VAL 13 4.880 43.582 4.445 1.00 0.00 C ATOM 1184 CB VAL 13 6.194 43.412 3.648 1.00 0.00 C ATOM 1186 CG1 VAL 13 7.277 43.200 4.688 1.00 0.00 C ATOM 1190 CG2 VAL 13 6.272 42.286 2.621 1.00 0.00 C ATOM 1194 C VAL 13 4.755 44.906 5.227 1.00 0.00 C ATOM 1195 O VAL 13 4.569 45.928 4.561 1.00 0.00 O ATOM 1196 N ALA 14 4.715 44.922 6.551 1.00 0.00 N ATOM 1198 CA ALA 14 4.305 45.972 7.407 1.00 0.00 C ATOM 1200 CB ALA 14 4.231 45.618 8.917 1.00 0.00 C ATOM 1204 C ALA 14 5.344 47.119 7.435 1.00 0.00 C ATOM 1205 O ALA 14 6.532 46.945 7.169 1.00 0.00 O ATOM 1206 N GLU 15 4.929 48.376 7.603 1.00 0.00 N ATOM 1208 CA GLU 15 5.786 49.627 7.397 1.00 0.00 C ATOM 1210 CB GLU 15 4.992 50.704 6.646 1.00 0.00 C ATOM 1213 CG GLU 15 5.609 52.038 6.505 1.00 0.00 C ATOM 1216 CD GLU 15 6.970 52.022 5.784 1.00 0.00 C ATOM 1217 OE1 GLU 15 7.004 52.186 4.565 1.00 0.00 O ATOM 1218 OE2 GLU 15 8.087 51.979 6.479 1.00 0.00 O ATOM 1219 C GLU 15 6.278 50.082 8.774 1.00 0.00 C ATOM 1220 O GLU 15 5.695 51.014 9.287 1.00 0.00 O ATOM 1221 N THR 16 7.242 49.361 9.428 1.00 0.00 N ATOM 1223 CA THR 16 7.602 49.511 10.855 1.00 0.00 C ATOM 1225 CB THR 16 8.235 48.237 11.401 1.00 0.00 C ATOM 1227 CG2 THR 16 7.395 47.033 11.586 1.00 0.00 C ATOM 1231 OG1 THR 16 9.054 47.720 10.366 1.00 0.00 O ATOM 1233 C THR 16 8.624 50.625 11.087 1.00 0.00 C ATOM 1234 O THR 16 9.230 50.859 12.150 1.00 0.00 O ATOM 1235 N GLY 17 8.913 51.375 9.945 1.00 0.00 N ATOM 1237 CA GLY 17 9.745 52.578 9.947 1.00 0.00 C ATOM 1240 C GLY 17 9.171 53.792 10.700 1.00 0.00 C ATOM 1241 O GLY 17 9.884 54.720 11.137 1.00 0.00 O ATOM 1242 N GLN 18 7.829 53.710 10.895 1.00 0.00 N ATOM 1244 CA GLN 18 7.073 54.435 11.844 1.00 0.00 C ATOM 1246 CB GLN 18 6.238 55.352 10.927 1.00 0.00 C ATOM 1249 CG GLN 18 5.349 56.421 11.541 1.00 0.00 C ATOM 1252 CD GLN 18 6.283 57.629 11.865 1.00 0.00 C ATOM 1253 OE1 GLN 18 7.001 57.657 12.831 1.00 0.00 O ATOM 1254 NE2 GLN 18 6.191 58.789 11.282 1.00 0.00 N ATOM 1257 C GLN 18 6.336 53.692 12.983 1.00 0.00 C ATOM 1258 O GLN 18 6.044 52.495 12.915 1.00 0.00 O ATOM 1259 N ASN 19 6.155 54.377 14.115 1.00 0.00 N ATOM 1261 CA ASN 19 5.933 53.828 15.470 1.00 0.00 C ATOM 1263 CB ASN 19 6.688 54.810 16.399 1.00 0.00 C ATOM 1266 CG ASN 19 6.946 54.224 17.754 1.00 0.00 C ATOM 1267 OD1 ASN 19 6.414 54.691 18.751 1.00 0.00 O ATOM 1268 ND2 ASN 19 7.910 53.325 17.822 1.00 0.00 N ATOM 1271 C ASN 19 4.493 53.645 15.953 1.00 0.00 C ATOM 1272 O ASN 19 4.108 52.617 16.486 1.00 0.00 O ATOM 1273 N TRP 20 3.614 54.665 15.780 1.00 0.00 N ATOM 1275 CA TRP 20 2.308 54.700 16.435 1.00 0.00 C ATOM 1277 CB TRP 20 2.018 56.205 16.584 1.00 0.00 C ATOM 1280 CG TRP 20 1.693 56.553 17.983 1.00 0.00 C ATOM 1281 CD1 TRP 20 0.479 56.356 18.526 1.00 0.00 C ATOM 1283 NE1 TRP 20 0.484 56.691 19.893 1.00 0.00 N ATOM 1285 CE2 TRP 20 1.596 57.392 20.173 1.00 0.00 C ATOM 1286 CZ2 TRP 20 2.113 57.948 21.308 1.00 0.00 C ATOM 1288 CH2 TRP 20 3.392 58.470 21.362 1.00 0.00 C ATOM 1290 CZ3 TRP 20 4.212 58.345 20.207 1.00 0.00 C ATOM 1292 CE3 TRP 20 3.816 57.672 19.026 1.00 0.00 C ATOM 1294 CD2 TRP 20 2.472 57.221 19.026 1.00 0.00 C ATOM 1295 C TRP 20 1.254 53.903 15.641 1.00 0.00 C ATOM 1296 O TRP 20 1.192 53.744 14.396 1.00 0.00 O ATOM 1297 N ALA 21 0.351 53.252 16.379 1.00 0.00 N ATOM 1299 CA ALA 21 -0.643 52.195 16.065 1.00 0.00 C ATOM 1301 CB ALA 21 -0.869 51.414 17.404 1.00 0.00 C ATOM 1305 C ALA 21 -1.969 52.668 15.407 1.00 0.00 C ATOM 1306 O ALA 21 -2.747 51.850 14.885 1.00 0.00 O ATOM 1307 N SER 22 -2.105 53.987 15.257 1.00 0.00 N ATOM 1309 CA SER 22 -3.285 54.683 14.575 1.00 0.00 C ATOM 1311 CB SER 22 -3.937 55.738 15.498 1.00 0.00 C ATOM 1314 OG SER 22 -3.029 56.850 15.652 1.00 0.00 O ATOM 1316 C SER 22 -3.002 55.172 13.168 1.00 0.00 C ATOM 1317 O SER 22 -3.887 55.389 12.354 1.00 0.00 O ATOM 1318 N LEU 23 -1.712 55.146 12.768 1.00 0.00 N ATOM 1320 CA LEU 23 -1.302 55.173 11.356 1.00 0.00 C ATOM 1322 CB LEU 23 0.075 55.941 11.237 1.00 0.00 C ATOM 1325 CG LEU 23 0.647 56.069 9.823 1.00 0.00 C ATOM 1327 CD1 LEU 23 -0.389 56.967 8.997 1.00 0.00 C ATOM 1331 CD2 LEU 23 2.068 56.502 9.648 1.00 0.00 C ATOM 1335 C LEU 23 -1.209 53.649 10.797 1.00 0.00 C ATOM 1336 O LEU 23 -0.656 52.713 11.379 1.00 0.00 O ATOM 1337 N ALA 24 -1.734 53.413 9.589 1.00 0.00 N ATOM 1339 CA ALA 24 -2.041 52.095 8.987 1.00 0.00 C ATOM 1341 CB ALA 24 -2.986 52.129 7.791 1.00 0.00 C ATOM 1345 C ALA 24 -0.860 51.106 8.668 1.00 0.00 C ATOM 1346 O ALA 24 0.195 51.559 8.251 1.00 0.00 O ATOM 1347 N ALA 25 -1.155 49.814 8.729 1.00 0.00 N ATOM 1349 CA ALA 25 -0.279 48.704 8.395 1.00 0.00 C ATOM 1351 CB ALA 25 -0.238 48.542 6.844 1.00 0.00 C ATOM 1355 C ALA 25 1.142 48.686 8.930 1.00 0.00 C ATOM 1356 O ALA 25 2.075 48.145 8.375 1.00 0.00 O ATOM 1357 N ASN 26 1.390 49.257 10.138 1.00 0.00 N ATOM 1359 CA ASN 26 2.735 49.418 10.758 1.00 0.00 C ATOM 1361 CB ASN 26 2.903 50.757 11.440 1.00 0.00 C ATOM 1364 CG ASN 26 2.670 50.687 12.942 1.00 0.00 C ATOM 1365 OD1 ASN 26 1.821 50.000 13.491 1.00 0.00 O ATOM 1366 ND2 ASN 26 3.499 51.452 13.681 1.00 0.00 N ATOM 1369 C ASN 26 3.145 48.347 11.759 1.00 0.00 C ATOM 1370 O ASN 26 4.209 48.379 12.312 1.00 0.00 O ATOM 1371 N GLU 27 2.269 47.306 11.832 1.00 0.00 N ATOM 1373 CA GLU 27 2.382 46.207 12.815 1.00 0.00 C ATOM 1375 CB GLU 27 1.632 46.557 14.104 1.00 0.00 C ATOM 1378 CG GLU 27 2.080 45.754 15.314 1.00 0.00 C ATOM 1381 CD GLU 27 1.368 46.065 16.676 1.00 0.00 C ATOM 1382 OE1 GLU 27 2.048 46.133 17.760 1.00 0.00 O ATOM 1383 OE2 GLU 27 0.142 46.044 16.707 1.00 0.00 O ATOM 1384 C GLU 27 1.777 45.018 12.079 1.00 0.00 C ATOM 1385 O GLU 27 1.129 45.123 10.986 1.00 0.00 O ATOM 1386 N LEU 28 2.050 43.932 12.744 1.00 0.00 N ATOM 1388 CA LEU 28 1.564 42.621 12.328 1.00 0.00 C ATOM 1390 CB LEU 28 2.545 41.543 12.730 1.00 0.00 C ATOM 1393 CG LEU 28 2.815 41.220 14.196 1.00 0.00 C ATOM 1395 CD1 LEU 28 1.629 40.589 14.928 1.00 0.00 C ATOM 1399 CD2 LEU 28 3.976 40.263 14.398 1.00 0.00 C ATOM 1403 C LEU 28 0.116 42.447 12.768 1.00 0.00 C ATOM 1404 O LEU 28 -0.398 43.150 13.633 1.00 0.00 O ATOM 1405 N ARG 29 -0.542 41.520 12.057 1.00 0.00 N ATOM 1407 CA ARG 29 -1.982 41.276 12.170 1.00 0.00 C ATOM 1409 CB ARG 29 -2.382 40.293 10.974 1.00 0.00 C ATOM 1412 CG ARG 29 -3.853 39.831 11.100 1.00 0.00 C ATOM 1415 CD ARG 29 -4.072 38.595 10.222 1.00 0.00 C ATOM 1418 NE ARG 29 -3.774 37.256 10.869 1.00 0.00 N ATOM 1420 CZ ARG 29 -4.730 36.395 11.172 1.00 0.00 C ATOM 1421 NH1 ARG 29 -6.022 36.613 11.057 1.00 0.00 N ATOM 1424 NH2 ARG 29 -4.304 35.180 11.415 1.00 0.00 N ATOM 1427 C ARG 29 -2.269 40.639 13.582 1.00 0.00 C ATOM 1428 O ARG 29 -1.714 39.564 13.874 1.00 0.00 O ATOM 1429 N VAL 30 -3.185 41.353 14.301 1.00 0.00 N ATOM 1431 CA VAL 30 -3.578 41.136 15.698 1.00 0.00 C ATOM 1433 CB VAL 30 -2.797 41.928 16.781 1.00 0.00 C ATOM 1435 CG1 VAL 30 -1.293 41.649 16.943 1.00 0.00 C ATOM 1439 CG2 VAL 30 -2.959 43.475 16.502 1.00 0.00 C ATOM 1443 C VAL 30 -5.031 41.434 15.892 1.00 0.00 C ATOM 1444 O VAL 30 -5.674 42.157 15.108 1.00 0.00 O ATOM 1445 N THR 31 -5.693 40.763 16.848 1.00 0.00 N ATOM 1447 CA THR 31 -7.195 40.763 17.075 1.00 0.00 C ATOM 1449 CB THR 31 -7.580 39.893 18.264 1.00 0.00 C ATOM 1451 CG2 THR 31 -9.020 39.478 18.308 1.00 0.00 C ATOM 1455 OG1 THR 31 -6.983 38.617 18.185 1.00 0.00 O ATOM 1457 C THR 31 -7.819 42.168 17.210 1.00 0.00 C ATOM 1458 O THR 31 -9.003 42.321 17.010 1.00 0.00 O ATOM 1459 N GLU 32 -7.017 43.147 17.638 1.00 0.00 N ATOM 1461 CA GLU 32 -7.297 44.486 17.911 1.00 0.00 C ATOM 1463 CB GLU 32 -6.311 45.022 18.893 1.00 0.00 C ATOM 1466 CG GLU 32 -6.512 46.493 19.288 1.00 0.00 C ATOM 1469 CD GLU 32 -5.473 46.805 20.306 1.00 0.00 C ATOM 1470 OE1 GLU 32 -4.319 47.109 19.890 1.00 0.00 O ATOM 1471 OE2 GLU 32 -5.751 46.547 21.506 1.00 0.00 O ATOM 1472 C GLU 32 -7.317 45.354 16.617 1.00 0.00 C ATOM 1473 O GLU 32 -8.304 46.121 16.510 1.00 0.00 O ATOM 1474 N ARG 33 -6.461 45.051 15.667 1.00 0.00 N ATOM 1476 CA ARG 33 -6.478 45.504 14.227 1.00 0.00 C ATOM 1478 CB ARG 33 -5.450 46.685 14.120 1.00 0.00 C ATOM 1481 CG ARG 33 -5.838 47.935 15.052 1.00 0.00 C ATOM 1484 CD ARG 33 -4.572 48.860 15.122 1.00 0.00 C ATOM 1487 NE ARG 33 -3.754 48.370 16.242 1.00 0.00 N ATOM 1489 CZ ARG 33 -2.761 47.503 16.242 1.00 0.00 C ATOM 1490 NH1 ARG 33 -1.905 47.204 15.316 1.00 0.00 N ATOM 1493 NH2 ARG 33 -2.430 46.940 17.348 1.00 0.00 N ATOM 1496 C ARG 33 -6.316 44.388 13.205 1.00 0.00 C ATOM 1497 O ARG 33 -5.293 44.476 12.496 1.00 0.00 O ATOM 1498 N PRO 34 -7.291 43.404 13.095 1.00 0.00 N ATOM 1499 CD PRO 34 -8.472 43.307 13.922 1.00 0.00 C ATOM 1502 CG PRO 34 -9.315 42.143 13.341 1.00 0.00 C ATOM 1505 CB PRO 34 -8.270 41.258 12.622 1.00 0.00 C ATOM 1508 CA PRO 34 -7.145 42.270 12.151 1.00 0.00 C ATOM 1510 C PRO 34 -7.239 42.566 10.602 1.00 0.00 C ATOM 1511 O PRO 34 -7.076 41.638 9.825 1.00 0.00 O ATOM 1512 N PHE 35 -7.484 43.832 10.208 1.00 0.00 N ATOM 1514 CA PHE 35 -7.851 44.164 8.808 1.00 0.00 C ATOM 1516 CB PHE 35 -8.519 45.484 8.672 1.00 0.00 C ATOM 1519 CG PHE 35 -9.614 45.733 9.698 1.00 0.00 C ATOM 1520 CD1 PHE 35 -10.971 45.224 9.414 1.00 0.00 C ATOM 1522 CE1 PHE 35 -11.957 45.231 10.429 1.00 0.00 C ATOM 1524 CZ PHE 35 -11.620 45.757 11.723 1.00 0.00 C ATOM 1526 CE2 PHE 35 -10.304 46.278 11.989 1.00 0.00 C ATOM 1528 CD2 PHE 35 -9.286 46.294 11.015 1.00 0.00 C ATOM 1530 C PHE 35 -6.680 44.287 7.876 1.00 0.00 C ATOM 1531 O PHE 35 -6.851 44.412 6.694 1.00 0.00 O ATOM 1532 N TRP 36 -5.501 44.352 8.476 1.00 0.00 N ATOM 1534 CA TRP 36 -4.306 44.704 7.678 1.00 0.00 C ATOM 1536 CB TRP 36 -3.269 45.439 8.588 1.00 0.00 C ATOM 1539 CG TRP 36 -3.683 46.720 9.258 1.00 0.00 C ATOM 1540 CD1 TRP 36 -4.751 47.412 8.908 1.00 0.00 C ATOM 1542 NE1 TRP 36 -4.763 48.571 9.722 1.00 0.00 N ATOM 1544 CE2 TRP 36 -3.649 48.687 10.558 1.00 0.00 C ATOM 1545 CZ2 TRP 36 -3.224 49.556 11.525 1.00 0.00 C ATOM 1547 CH2 TRP 36 -2.047 49.280 12.299 1.00 0.00 C ATOM 1549 CZ3 TRP 36 -1.430 48.024 12.100 1.00 0.00 C ATOM 1551 CE3 TRP 36 -1.857 47.097 11.097 1.00 0.00 C ATOM 1553 CD2 TRP 36 -2.977 47.492 10.266 1.00 0.00 C ATOM 1554 C TRP 36 -3.697 43.538 6.887 1.00 0.00 C ATOM 1555 O TRP 36 -2.801 43.709 6.019 1.00 0.00 O ATOM 1556 N ILE 37 -4.010 42.306 7.336 1.00 0.00 N ATOM 1558 CA ILE 37 -3.470 41.053 6.747 1.00 0.00 C ATOM 1560 CB ILE 37 -4.355 40.639 5.565 1.00 0.00 C ATOM 1562 CG2 ILE 37 -5.752 40.129 6.039 1.00 0.00 C ATOM 1566 CG1 ILE 37 -4.369 41.536 4.373 1.00 0.00 C ATOM 1569 CD1 ILE 37 -5.019 40.869 3.043 1.00 0.00 C ATOM 1573 C ILE 37 -1.985 41.117 6.351 1.00 0.00 C ATOM 1574 O ILE 37 -1.522 40.554 5.317 1.00 0.00 O ATOM 1575 N SER 38 -1.167 41.769 7.198 1.00 0.00 N ATOM 1577 CA SER 38 0.254 42.132 7.072 1.00 0.00 C ATOM 1579 CB SER 38 0.379 43.637 7.385 1.00 0.00 C ATOM 1582 OG SER 38 -0.283 43.893 8.661 1.00 0.00 O ATOM 1584 C SER 38 1.183 41.403 8.093 1.00 0.00 C ATOM 1585 O SER 38 0.730 41.078 9.194 1.00 0.00 O ATOM 1586 N SER 39 2.404 41.053 7.710 1.00 0.00 N ATOM 1588 CA SER 39 3.389 40.496 8.716 1.00 0.00 C ATOM 1590 CB SER 39 3.512 38.994 8.398 1.00 0.00 C ATOM 1593 OG SER 39 3.869 38.277 9.606 1.00 0.00 O ATOM 1595 C SER 39 4.814 41.169 8.606 1.00 0.00 C ATOM 1596 O SER 39 5.092 41.889 7.594 1.00 0.00 O ATOM 1597 N PHE 40 5.730 40.877 9.645 1.00 0.00 N ATOM 1599 CA PHE 40 7.119 41.470 9.570 1.00 0.00 C ATOM 1601 CB PHE 40 7.126 42.837 10.272 1.00 0.00 C ATOM 1604 CG PHE 40 8.466 43.603 10.109 1.00 0.00 C ATOM 1605 CD1 PHE 40 9.225 44.043 11.255 1.00 0.00 C ATOM 1607 CE1 PHE 40 10.335 44.828 11.122 1.00 0.00 C ATOM 1609 CZ PHE 40 10.879 45.065 9.833 1.00 0.00 C ATOM 1611 CE2 PHE 40 10.108 44.747 8.712 1.00 0.00 C ATOM 1613 CD2 PHE 40 8.882 43.982 8.841 1.00 0.00 C ATOM 1615 C PHE 40 8.126 40.559 10.282 1.00 0.00 C ATOM 1616 O PHE 40 7.757 39.696 11.043 1.00 0.00 O ATOM 1617 N ILE 41 9.421 40.724 10.006 1.00 0.00 N ATOM 1619 CA ILE 41 10.386 39.639 10.178 1.00 0.00 C ATOM 1621 CB ILE 41 11.232 39.446 8.869 1.00 0.00 C ATOM 1623 CG2 ILE 41 10.360 39.245 7.665 1.00 0.00 C ATOM 1627 CG1 ILE 41 12.186 40.701 8.670 1.00 0.00 C ATOM 1630 CD1 ILE 41 13.610 40.344 9.224 1.00 0.00 C ATOM 1634 C ILE 41 11.226 39.768 11.511 1.00 0.00 C ATOM 1635 O ILE 41 11.772 38.777 11.958 1.00 0.00 O ATOM 1636 N GLY 42 11.367 40.932 12.058 1.00 0.00 N ATOM 1638 CA GLY 42 12.025 41.208 13.320 1.00 0.00 C ATOM 1641 C GLY 42 11.201 41.263 14.591 1.00 0.00 C ATOM 1642 O GLY 42 11.686 41.717 15.574 1.00 0.00 O ATOM 1643 N ARG 43 9.938 40.826 14.464 1.00 0.00 N ATOM 1645 CA ARG 43 8.964 40.703 15.598 1.00 0.00 C ATOM 1647 CB ARG 43 7.879 41.723 15.521 1.00 0.00 C ATOM 1650 CG ARG 43 8.346 43.193 15.706 1.00 0.00 C ATOM 1653 CD ARG 43 8.645 43.437 17.187 1.00 0.00 C ATOM 1656 NE ARG 43 9.945 42.909 17.535 1.00 0.00 N ATOM 1658 CZ ARG 43 10.437 42.529 18.662 1.00 0.00 C ATOM 1659 NH1 ARG 43 9.797 42.411 19.826 1.00 0.00 N ATOM 1662 NH2 ARG 43 11.682 42.264 18.599 1.00 0.00 N ATOM 1665 C ARG 43 8.414 39.204 15.668 1.00 0.00 C ATOM 1666 O ARG 43 8.430 38.503 14.706 1.00 0.00 O ATOM 1667 N SER 44 7.936 38.743 16.817 1.00 0.00 N ATOM 1669 CA SER 44 7.581 37.348 17.075 1.00 0.00 C ATOM 1671 CB SER 44 8.753 36.599 17.733 1.00 0.00 C ATOM 1674 OG SER 44 9.228 37.291 18.844 1.00 0.00 O ATOM 1676 C SER 44 6.239 37.161 17.787 1.00 0.00 C ATOM 1677 O SER 44 5.957 37.735 18.889 1.00 0.00 O ATOM 1678 N LYS 45 5.428 36.282 17.196 1.00 0.00 N ATOM 1680 CA LYS 45 4.083 35.817 17.592 1.00 0.00 C ATOM 1682 CB LYS 45 3.332 35.238 16.393 1.00 0.00 C ATOM 1685 CG LYS 45 2.792 36.364 15.366 1.00 0.00 C ATOM 1688 CD LYS 45 2.156 35.546 14.192 1.00 0.00 C ATOM 1691 CE LYS 45 2.509 36.151 12.752 1.00 0.00 C ATOM 1694 NZ LYS 45 2.327 35.123 11.712 1.00 0.00 N ATOM 1698 C LYS 45 4.007 34.952 18.816 1.00 0.00 C ATOM 1699 O LYS 45 4.972 34.177 18.958 1.00 0.00 O TER END