####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name S0953s2TS288_5-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name S0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap S0953s2TS288_5-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 19 22 - 40 4.98 15.10 LCS_AVERAGE: 38.22 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 10 - 19 1.57 24.48 LCS_AVERAGE: 15.65 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 10 - 17 0.88 25.03 LCS_AVERAGE: 10.59 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 6 9 3 4 5 6 8 10 12 12 13 15 17 18 20 21 23 25 26 27 27 28 LCS_GDT V 3 V 3 4 6 9 3 4 5 6 8 10 12 12 13 15 17 18 20 21 23 25 26 27 27 28 LCS_GDT Q 4 Q 4 4 6 9 4 4 5 5 6 7 9 12 13 15 17 18 20 20 23 25 26 27 27 28 LCS_GDT G 5 G 5 4 6 17 3 4 4 5 5 8 8 9 10 13 15 18 20 20 23 25 26 27 27 28 LCS_GDT P 6 P 6 3 6 17 1 2 3 4 5 6 7 8 10 12 13 14 15 16 18 21 24 27 27 28 LCS_GDT W 7 W 7 3 6 17 0 3 3 5 5 6 7 8 11 12 13 14 15 17 23 25 26 27 27 28 LCS_GDT V 8 V 8 3 4 17 0 3 3 4 5 5 7 10 12 12 14 15 19 20 23 25 26 27 27 28 LCS_GDT G 9 G 9 3 4 17 1 3 3 4 6 8 11 11 12 13 14 14 17 19 23 25 26 27 27 28 LCS_GDT S 10 S 10 8 10 17 0 7 8 9 10 10 11 11 12 13 14 14 15 16 17 19 23 25 26 27 LCS_GDT S 11 S 11 8 10 17 3 7 8 9 10 10 11 11 12 13 14 14 15 16 16 17 19 23 25 27 LCS_GDT Y 12 Y 12 8 10 17 5 7 8 9 10 10 11 11 12 13 14 14 15 16 16 17 19 22 25 26 LCS_GDT V 13 V 13 8 10 17 5 7 8 9 10 10 11 11 12 13 14 14 15 16 16 18 21 23 25 27 LCS_GDT A 14 A 14 8 10 17 5 7 8 9 10 10 11 11 12 13 14 14 15 16 16 17 19 21 25 27 LCS_GDT E 15 E 15 8 10 17 5 7 8 9 10 10 11 11 12 13 14 14 15 16 16 17 18 19 20 21 LCS_GDT T 16 T 16 8 10 17 5 7 8 9 10 10 11 11 12 13 14 14 15 16 16 17 18 19 20 21 LCS_GDT G 17 G 17 8 10 17 4 5 8 9 10 10 11 11 12 13 14 14 15 16 16 18 19 22 25 27 LCS_GDT Q 18 Q 18 5 10 17 4 5 6 9 10 10 11 11 12 13 14 14 15 16 16 18 19 23 25 27 LCS_GDT N 19 N 19 5 10 17 4 5 5 7 10 10 11 11 12 13 14 14 17 18 23 25 26 27 27 28 LCS_GDT W 20 W 20 3 6 17 3 3 3 5 6 8 8 11 12 13 15 18 20 20 23 25 26 27 27 28 LCS_GDT A 21 A 21 3 4 18 3 3 3 4 6 8 8 11 12 15 16 18 20 20 23 25 26 27 27 28 LCS_GDT S 22 S 22 3 4 19 1 3 5 7 8 10 12 12 13 15 17 18 20 21 23 25 26 27 27 28 LCS_GDT L 23 L 23 3 3 19 1 3 4 7 8 10 12 12 13 15 17 18 20 21 23 25 26 27 27 28 LCS_GDT A 24 A 24 3 4 19 1 3 4 6 8 10 12 12 13 15 17 18 20 21 23 25 26 27 27 28 LCS_GDT A 25 A 25 4 5 19 3 4 4 5 5 6 8 9 13 14 16 17 20 21 22 25 26 27 27 28 LCS_GDT N 26 N 26 4 5 19 3 4 4 5 5 5 6 7 9 12 15 17 20 21 22 24 26 26 27 28 LCS_GDT E 27 E 27 4 6 19 3 4 4 5 5 7 9 9 11 12 15 16 20 21 22 24 26 26 27 28 LCS_GDT L 28 L 28 4 6 19 3 4 4 7 7 10 10 12 13 15 17 18 20 21 23 25 26 27 27 28 LCS_GDT R 29 R 29 4 6 19 0 4 4 7 7 10 10 12 13 15 17 18 20 21 23 25 26 27 27 28 LCS_GDT V 30 V 30 4 6 19 3 4 4 7 7 10 10 12 13 15 17 18 20 21 23 25 26 27 27 28 LCS_GDT T 31 T 31 4 6 19 3 4 5 7 8 10 12 12 13 15 17 18 20 21 23 25 26 27 27 28 LCS_GDT E 32 E 32 4 7 19 3 4 4 7 7 7 10 12 12 14 17 18 20 21 22 23 26 27 27 28 LCS_GDT R 33 R 33 4 7 19 3 4 5 6 8 10 12 12 13 15 17 18 20 21 23 25 26 27 27 28 LCS_GDT P 34 P 34 4 7 19 4 4 5 5 8 10 12 12 13 15 17 18 20 21 23 25 26 27 27 28 LCS_GDT F 35 F 35 4 7 19 4 4 5 6 8 10 12 12 13 15 17 18 20 21 23 25 26 27 27 28 LCS_GDT W 36 W 36 4 7 19 4 4 5 6 8 10 12 12 13 15 17 18 20 21 23 25 26 27 27 28 LCS_GDT I 37 I 37 4 7 19 0 3 5 6 8 10 12 12 13 15 17 18 20 21 23 25 26 27 27 28 LCS_GDT S 38 S 38 3 7 19 0 3 5 5 7 10 12 12 13 15 17 18 20 21 23 25 26 27 27 28 LCS_GDT S 39 S 39 3 7 19 0 3 3 4 6 6 8 9 10 12 15 17 20 21 22 25 26 27 27 28 LCS_GDT F 40 F 40 5 7 19 4 5 5 6 6 7 8 9 10 10 11 12 20 21 22 22 23 24 26 27 LCS_GDT I 41 I 41 5 7 14 4 5 5 6 6 7 8 9 10 10 11 12 20 21 22 22 23 24 26 27 LCS_GDT G 42 G 42 5 7 12 4 5 5 6 6 7 8 9 10 10 11 12 14 19 21 22 23 24 26 27 LCS_GDT R 43 R 43 5 7 12 4 5 5 6 6 7 8 9 10 10 11 12 13 17 19 19 20 24 25 27 LCS_GDT S 44 S 44 5 7 12 4 5 5 6 6 7 8 9 10 10 11 12 13 13 13 17 20 21 23 26 LCS_GDT K 45 K 45 5 7 12 0 3 3 6 6 7 8 9 10 10 11 12 12 12 13 17 21 24 25 26 LCS_AVERAGE LCS_A: 21.49 ( 10.59 15.65 38.22 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 5 7 8 9 10 10 12 12 13 15 17 18 20 21 23 25 26 27 27 28 GDT PERCENT_AT 11.36 15.91 18.18 20.45 22.73 22.73 27.27 27.27 29.55 34.09 38.64 40.91 45.45 47.73 52.27 56.82 59.09 61.36 61.36 63.64 GDT RMS_LOCAL 0.21 0.55 0.88 1.15 1.57 1.57 2.62 2.44 2.83 3.25 3.71 3.98 4.56 4.92 5.50 5.76 5.87 8.57 6.02 6.23 GDT RMS_ALL_AT 25.50 25.02 25.03 25.02 24.48 24.48 13.80 15.31 13.79 13.66 13.39 13.16 12.70 14.54 11.96 11.96 12.05 11.96 12.15 12.52 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 15 E 15 # possible swapping detected: E 27 E 27 # possible swapping detected: E 32 E 32 # possible swapping detected: F 35 F 35 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 9.226 0 0.056 0.056 10.569 0.000 0.000 - LGA V 3 V 3 7.546 0 0.150 0.174 11.108 0.000 0.000 6.196 LGA Q 4 Q 4 11.052 0 0.272 0.909 16.587 0.000 0.000 12.251 LGA G 5 G 5 13.826 0 0.739 0.739 16.934 0.000 0.000 - LGA P 6 P 6 14.290 0 0.682 0.570 14.687 0.000 0.000 13.798 LGA W 7 W 7 14.315 0 0.394 1.241 23.360 0.000 0.000 22.179 LGA V 8 V 8 12.828 0 0.610 1.502 13.712 0.000 0.000 9.139 LGA G 9 G 9 15.028 0 0.444 0.444 16.681 0.000 0.000 - LGA S 10 S 10 21.145 0 0.628 0.594 24.474 0.000 0.000 24.474 LGA S 11 S 11 24.815 0 0.111 0.127 26.361 0.000 0.000 26.126 LGA Y 12 Y 12 24.779 0 0.024 1.092 25.524 0.000 0.000 22.536 LGA V 13 V 13 23.747 0 0.071 0.188 25.770 0.000 0.000 22.812 LGA A 14 A 14 27.804 0 0.033 0.032 30.040 0.000 0.000 - LGA E 15 E 15 30.228 0 0.030 1.170 31.934 0.000 0.000 31.934 LGA T 16 T 16 28.315 0 0.040 0.068 28.671 0.000 0.000 24.835 LGA G 17 G 17 27.240 0 0.094 0.094 27.582 0.000 0.000 - LGA Q 18 Q 18 21.370 0 0.518 1.348 23.435 0.000 0.000 19.327 LGA N 19 N 19 18.418 0 0.611 1.213 19.038 0.000 0.000 18.739 LGA W 20 W 20 12.581 0 0.044 1.080 15.084 0.000 0.000 14.990 LGA A 21 A 21 9.203 0 0.623 0.597 10.322 0.000 0.000 - LGA S 22 S 22 2.230 0 0.566 0.546 4.679 30.909 25.455 4.554 LGA L 23 L 23 1.811 0 0.615 0.604 6.040 45.455 28.182 4.186 LGA A 24 A 24 1.711 0 0.604 0.587 3.534 35.000 31.636 - LGA A 25 A 25 6.508 0 0.547 0.563 8.209 1.364 1.091 - LGA N 26 N 26 11.744 0 0.049 0.411 16.398 0.000 0.000 15.492 LGA E 27 E 27 11.616 0 0.383 0.952 17.056 0.000 0.000 17.056 LGA L 28 L 28 7.814 0 0.556 1.089 8.207 0.000 0.000 7.261 LGA R 29 R 29 7.052 0 0.531 1.628 7.761 0.000 0.165 4.684 LGA V 30 V 30 3.799 0 0.147 1.006 7.012 26.364 16.623 4.475 LGA T 31 T 31 2.223 0 0.396 0.331 5.353 42.273 25.195 4.840 LGA E 32 E 32 3.929 0 0.586 1.490 9.488 18.182 8.081 9.146 LGA R 33 R 33 1.794 0 0.565 1.539 11.653 55.455 21.983 11.027 LGA P 34 P 34 2.979 0 0.032 0.064 5.819 35.909 21.299 5.819 LGA F 35 F 35 0.637 0 0.019 1.143 2.527 56.364 66.777 0.639 LGA W 36 W 36 1.821 0 0.086 1.208 13.477 51.364 16.623 13.477 LGA I 37 I 37 1.308 0 0.605 1.293 2.690 58.636 53.864 2.090 LGA S 38 S 38 2.767 0 0.661 0.868 6.303 16.364 14.848 4.089 LGA S 39 S 39 9.986 0 0.674 0.575 12.408 0.000 0.000 12.408 LGA F 40 F 40 11.747 0 0.663 0.880 16.617 0.000 0.000 16.016 LGA I 41 I 41 11.555 0 0.363 1.264 14.909 0.000 0.000 10.286 LGA G 42 G 42 16.136 0 0.463 0.463 17.978 0.000 0.000 - LGA R 43 R 43 19.435 0 0.011 1.252 23.455 0.000 0.000 23.372 LGA S 44 S 44 23.064 0 0.471 0.439 25.275 0.000 0.000 24.155 LGA K 45 K 45 22.693 0 0.030 0.203 23.706 0.000 0.000 18.072 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 10.961 10.917 11.702 10.764 7.541 4.052 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 12 2.44 30.114 26.102 0.473 LGA_LOCAL RMSD: 2.435 Number of atoms: 12 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 15.314 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 10.961 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.016605 * X + -0.599371 * Y + 0.800299 * Z + -16.792170 Y_new = -0.997469 * X + 0.065270 * Y + 0.028186 * Z + 40.087898 Z_new = -0.069130 * X + -0.797806 * Y + -0.598938 * Z + -33.607349 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.587442 0.069185 -2.214765 [DEG: -90.9537 3.9640 -126.8967 ] ZXZ: 1.606002 2.212970 -3.055159 [DEG: 92.0171 126.7939 -175.0477 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: S0953s2TS288_5-D1 REMARK 2: S0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap S0953s2TS288_5-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 12 2.44 26.102 10.96 REMARK ---------------------------------------------------------- MOLECULE S0953s2TS288_5-D1 PFRMAT TS TARGET S0953s2 MODEL 5 REFINED PARENT N/A ATOM 525 N ALA 2 8.837 34.734 5.753 1.00 8.56 ATOM 526 CA ALA 2 7.852 34.116 4.847 1.00 8.56 ATOM 527 C ALA 2 6.407 34.072 5.396 1.00 8.56 ATOM 528 O ALA 2 6.188 34.235 6.601 1.00 8.56 ATOM 529 CB ALA 2 8.343 32.693 4.547 1.00 8.77 ATOM 530 N VAL 3 5.435 33.758 4.527 1.00 7.00 ATOM 531 CA VAL 3 4.012 33.527 4.859 1.00 7.00 ATOM 532 C VAL 3 3.448 32.370 4.010 1.00 7.00 ATOM 533 O VAL 3 3.122 32.554 2.837 1.00 7.00 ATOM 534 CB VAL 3 3.171 34.814 4.660 1.00 7.05 ATOM 535 CG1 VAL 3 1.731 34.621 5.153 1.00 7.05 ATOM 536 CG2 VAL 3 3.734 36.035 5.398 1.00 7.05 ATOM 537 N GLN 4 3.319 31.170 4.598 1.00 5.65 ATOM 538 CA GLN 4 2.898 29.942 3.897 1.00 5.65 ATOM 539 C GLN 4 1.840 29.148 4.695 1.00 5.65 ATOM 540 O GLN 4 2.166 28.305 5.534 1.00 5.65 ATOM 541 CB GLN 4 4.154 29.113 3.552 1.00 6.19 ATOM 542 CG GLN 4 3.859 27.899 2.649 1.00 6.19 ATOM 543 CD GLN 4 5.078 27.004 2.407 1.00 6.19 ATOM 544 OE1 GLN 4 6.219 27.327 2.722 1.00 6.19 ATOM 545 NE2 GLN 4 4.897 25.839 1.820 1.00 6.19 ATOM 546 N GLY 5 0.559 29.434 4.436 1.00 4.92 ATOM 547 CA GLY 5 -0.612 28.766 5.029 1.00 4.92 ATOM 548 C GLY 5 -1.229 29.278 6.360 1.00 4.92 ATOM 549 O GLY 5 -2.149 28.599 6.828 1.00 4.92 ATOM 550 N PRO 6 -0.821 30.402 7.001 1.00 3.85 ATOM 551 CA PRO 6 -1.531 30.949 8.175 1.00 3.85 ATOM 552 C PRO 6 -2.911 31.551 7.812 1.00 3.85 ATOM 553 O PRO 6 -3.274 31.611 6.635 1.00 3.85 ATOM 554 CB PRO 6 -0.562 31.969 8.784 1.00 3.81 ATOM 555 CG PRO 6 0.259 32.453 7.593 1.00 3.81 ATOM 556 CD PRO 6 0.323 31.245 6.677 1.00 3.81 ATOM 557 N TRP 7 -3.703 32.000 8.804 1.00 3.19 ATOM 558 CA TRP 7 -5.069 32.516 8.568 1.00 3.19 ATOM 559 C TRP 7 -5.476 33.753 9.393 1.00 3.19 ATOM 560 O TRP 7 -4.938 33.992 10.475 1.00 3.19 ATOM 561 CB TRP 7 -6.084 31.346 8.536 1.00 4.53 ATOM 562 CG TRP 7 -7.072 31.043 9.631 1.00 4.53 ATOM 563 CD1 TRP 7 -7.136 31.521 10.897 1.00 4.53 ATOM 564 CD2 TRP 7 -8.187 30.100 9.521 1.00 4.53 ATOM 565 NE1 TRP 7 -8.212 30.958 11.560 1.00 4.53 ATOM 566 CE2 TRP 7 -8.898 30.073 10.757 1.00 4.53 ATOM 567 CE3 TRP 7 -8.666 29.265 8.487 1.00 4.53 ATOM 568 CZ2 TRP 7 -10.027 29.263 10.958 1.00 4.53 ATOM 569 CZ3 TRP 7 -9.800 28.449 8.675 1.00 4.53 ATOM 570 CH2 TRP 7 -10.482 28.450 9.906 1.00 4.53 ATOM 571 N VAL 8 -6.398 34.569 8.861 1.00 2.80 ATOM 572 CA VAL 8 -6.742 35.917 9.378 1.00 2.80 ATOM 573 C VAL 8 -8.031 35.996 10.214 1.00 2.80 ATOM 574 O VAL 8 -8.809 35.042 10.270 1.00 2.80 ATOM 575 CB VAL 8 -6.721 36.993 8.262 1.00 3.33 ATOM 576 CG1 VAL 8 -5.576 36.784 7.265 1.00 3.33 ATOM 577 CG2 VAL 8 -8.018 37.105 7.465 1.00 3.33 ATOM 578 N GLY 9 -8.235 37.151 10.867 1.00 3.50 ATOM 579 CA GLY 9 -9.389 37.474 11.722 1.00 3.50 ATOM 580 C GLY 9 -10.735 37.669 10.996 1.00 3.50 ATOM 581 O GLY 9 -10.842 37.487 9.781 1.00 3.50 ATOM 582 N SER 10 -11.770 38.050 11.757 1.00 4.93 ATOM 583 CA SER 10 -13.177 38.123 11.313 1.00 4.93 ATOM 584 C SER 10 -13.802 39.530 11.433 1.00 4.93 ATOM 585 O SER 10 -13.191 40.450 11.988 1.00 4.93 ATOM 586 CB SER 10 -14.001 37.096 12.099 1.00 5.27 ATOM 587 OG SER 10 -14.113 37.478 13.462 1.00 5.27 ATOM 588 N SER 11 -15.027 39.706 10.908 1.00 6.40 ATOM 589 CA SER 11 -15.719 41.003 10.838 1.00 6.40 ATOM 590 C SER 11 -17.232 40.910 11.093 1.00 6.40 ATOM 591 O SER 11 -17.700 41.436 12.107 1.00 6.40 ATOM 592 CB SER 11 -15.403 41.693 9.506 1.00 6.58 ATOM 593 OG SER 11 -15.902 43.018 9.523 1.00 6.58 ATOM 594 N TYR 12 -18.008 40.193 10.266 1.00 6.37 ATOM 595 CA TYR 12 -19.439 39.971 10.533 1.00 6.37 ATOM 596 C TYR 12 -19.658 38.842 11.560 1.00 6.37 ATOM 597 O TYR 12 -20.598 38.948 12.344 1.00 6.37 ATOM 598 CB TYR 12 -20.257 39.705 9.252 1.00 6.58 ATOM 599 CG TYR 12 -20.452 40.849 8.261 1.00 6.58 ATOM 600 CD1 TYR 12 -19.363 41.396 7.548 1.00 6.58 ATOM 601 CD2 TYR 12 -21.759 41.300 7.975 1.00 6.58 ATOM 602 CE1 TYR 12 -19.577 42.379 6.560 1.00 6.58 ATOM 603 CE2 TYR 12 -21.979 42.276 6.984 1.00 6.58 ATOM 604 CZ TYR 12 -20.889 42.813 6.265 1.00 6.58 ATOM 605 OH TYR 12 -21.114 43.741 5.290 1.00 6.58 ATOM 606 N VAL 13 -18.791 37.814 11.645 1.00 6.35 ATOM 607 CA VAL 13 -18.914 36.726 12.658 1.00 6.35 ATOM 608 C VAL 13 -18.951 37.263 14.104 1.00 6.35 ATOM 609 O VAL 13 -19.661 36.731 14.963 1.00 6.35 ATOM 610 CB VAL 13 -17.786 35.666 12.551 1.00 6.16 ATOM 611 CG1 VAL 13 -18.101 34.410 13.375 1.00 6.16 ATOM 612 CG2 VAL 13 -17.519 35.165 11.129 1.00 6.16 ATOM 613 N ALA 14 -18.215 38.348 14.380 1.00 7.01 ATOM 614 CA ALA 14 -18.245 39.038 15.672 1.00 7.01 ATOM 615 C ALA 14 -19.571 39.794 15.912 1.00 7.01 ATOM 616 O ALA 14 -20.079 39.826 17.033 1.00 7.01 ATOM 617 CB ALA 14 -17.050 39.998 15.720 1.00 7.04 ATOM 618 N GLU 15 -20.146 40.388 14.862 1.00 7.91 ATOM 619 CA GLU 15 -21.383 41.184 14.916 1.00 7.91 ATOM 620 C GLU 15 -22.653 40.312 14.987 1.00 7.91 ATOM 621 O GLU 15 -23.639 40.711 15.612 1.00 7.91 ATOM 622 CB GLU 15 -21.425 42.160 13.725 1.00 8.33 ATOM 623 CG GLU 15 -20.281 43.190 13.804 1.00 8.33 ATOM 624 CD GLU 15 -20.174 44.107 12.569 1.00 8.33 ATOM 625 OE1 GLU 15 -21.211 44.438 11.939 1.00 8.33 ATOM 626 OE2 GLU 15 -19.038 44.541 12.249 1.00 8.33 ATOM 627 N THR 16 -22.628 39.097 14.417 1.00 8.45 ATOM 628 CA THR 16 -23.672 38.066 14.610 1.00 8.45 ATOM 629 C THR 16 -23.576 37.373 15.980 1.00 8.45 ATOM 630 O THR 16 -24.487 36.634 16.364 1.00 8.45 ATOM 631 CB THR 16 -23.642 36.994 13.505 1.00 8.17 ATOM 632 OG1 THR 16 -22.411 36.301 13.502 1.00 8.17 ATOM 633 CG2 THR 16 -23.884 37.572 12.110 1.00 8.17 ATOM 634 N GLY 17 -22.500 37.619 16.741 1.00 9.46 ATOM 635 CA GLY 17 -22.300 37.112 18.102 1.00 9.46 ATOM 636 C GLY 17 -21.892 35.635 18.193 1.00 9.46 ATOM 637 O GLY 17 -22.095 35.019 19.242 1.00 9.46 ATOM 638 N GLN 18 -21.344 35.052 17.118 1.00 8.74 ATOM 639 CA GLN 18 -20.912 33.648 17.089 1.00 8.74 ATOM 640 C GLN 18 -19.578 33.444 17.835 1.00 8.74 ATOM 641 O GLN 18 -19.575 32.888 18.937 1.00 8.74 ATOM 642 CB GLN 18 -20.922 33.132 15.636 1.00 8.31 ATOM 643 CG GLN 18 -20.341 31.720 15.417 1.00 8.31 ATOM 644 CD GLN 18 -21.056 30.589 16.167 1.00 8.31 ATOM 645 OE1 GLN 18 -22.131 30.732 16.737 1.00 8.31 ATOM 646 NE2 GLN 18 -20.485 29.402 16.189 1.00 8.31 ATOM 647 N ASN 19 -18.450 33.889 17.262 1.00 8.15 ATOM 648 CA ASN 19 -17.110 33.819 17.873 1.00 8.15 ATOM 649 C ASN 19 -16.084 34.735 17.156 1.00 8.15 ATOM 650 O ASN 19 -16.385 35.358 16.135 1.00 8.15 ATOM 651 CB ASN 19 -16.626 32.342 17.878 1.00 8.10 ATOM 652 CG ASN 19 -15.556 32.048 18.926 1.00 8.10 ATOM 653 OD1 ASN 19 -15.284 32.833 19.826 1.00 8.10 ATOM 654 ND2 ASN 19 -14.893 30.920 18.835 1.00 8.10 ATOM 655 N TRP 20 -14.853 34.775 17.673 1.00 7.56 ATOM 656 CA TRP 20 -13.672 35.438 17.102 1.00 7.56 ATOM 657 C TRP 20 -12.470 34.473 17.129 1.00 7.56 ATOM 658 O TRP 20 -12.265 33.768 18.122 1.00 7.56 ATOM 659 CB TRP 20 -13.428 36.732 17.893 1.00 6.73 ATOM 660 CG TRP 20 -12.226 37.560 17.542 1.00 6.73 ATOM 661 CD1 TRP 20 -12.247 38.692 16.803 1.00 6.73 ATOM 662 CD2 TRP 20 -10.834 37.386 17.963 1.00 6.73 ATOM 663 NE1 TRP 20 -10.981 39.244 16.755 1.00 6.73 ATOM 664 CE2 TRP 20 -10.069 38.480 17.452 1.00 6.73 ATOM 665 CE3 TRP 20 -10.142 36.440 18.755 1.00 6.73 ATOM 666 CZ2 TRP 20 -8.698 38.627 17.713 1.00 6.73 ATOM 667 CZ3 TRP 20 -8.764 36.572 19.011 1.00 6.73 ATOM 668 CH2 TRP 20 -8.041 37.663 18.495 1.00 6.73 ATOM 669 N ALA 21 -11.696 34.404 16.038 1.00 6.96 ATOM 670 CA ALA 21 -10.582 33.459 15.861 1.00 6.96 ATOM 671 C ALA 21 -9.540 33.962 14.839 1.00 6.96 ATOM 672 O ALA 21 -9.851 34.792 13.983 1.00 6.96 ATOM 673 CB ALA 21 -11.149 32.096 15.436 1.00 7.19 ATOM 674 N SER 22 -8.303 33.456 14.927 1.00 5.73 ATOM 675 CA SER 22 -7.138 33.938 14.159 1.00 5.73 ATOM 676 C SER 22 -5.946 32.959 14.188 1.00 5.73 ATOM 677 O SER 22 -5.963 31.937 14.883 1.00 5.73 ATOM 678 CB SER 22 -6.683 35.285 14.750 1.00 6.18 ATOM 679 OG SER 22 -6.221 35.110 16.082 1.00 6.18 ATOM 680 N LEU 23 -4.894 33.291 13.430 1.00 4.51 ATOM 681 CA LEU 23 -3.555 32.683 13.450 1.00 4.51 ATOM 682 C LEU 23 -2.495 33.800 13.323 1.00 4.51 ATOM 683 O LEU 23 -2.828 34.977 13.150 1.00 4.51 ATOM 684 CB LEU 23 -3.441 31.613 12.336 1.00 4.07 ATOM 685 CG LEU 23 -3.305 30.177 12.876 1.00 4.07 ATOM 686 CD1 LEU 23 -3.572 29.167 11.758 1.00 4.07 ATOM 687 CD2 LEU 23 -1.898 29.920 13.423 1.00 4.07 ATOM 688 N ALA 24 -1.214 33.437 13.430 1.00 4.23 ATOM 689 CA ALA 24 -0.081 34.367 13.436 1.00 4.23 ATOM 690 C ALA 24 1.153 33.778 12.725 1.00 4.23 ATOM 691 O ALA 24 1.342 32.559 12.694 1.00 4.23 ATOM 692 CB ALA 24 0.231 34.739 14.892 1.00 4.43 ATOM 693 N ALA 25 2.003 34.650 12.174 1.00 4.89 ATOM 694 CA ALA 25 3.280 34.302 11.542 1.00 4.89 ATOM 695 C ALA 25 4.304 35.451 11.645 1.00 4.89 ATOM 696 O ALA 25 4.006 36.531 12.159 1.00 4.89 ATOM 697 CB ALA 25 3.021 33.906 10.076 1.00 4.94 ATOM 698 N ASN 26 5.510 35.231 11.108 1.00 5.91 ATOM 699 CA ASN 26 6.599 36.218 11.095 1.00 5.91 ATOM 700 C ASN 26 6.223 37.536 10.381 1.00 5.91 ATOM 701 O ASN 26 6.705 38.602 10.763 1.00 5.91 ATOM 702 CB ASN 26 7.836 35.570 10.450 1.00 7.06 ATOM 703 CG ASN 26 8.370 34.401 11.266 1.00 7.06 ATOM 704 OD1 ASN 26 8.903 34.566 12.354 1.00 7.06 ATOM 705 ND2 ASN 26 8.240 33.184 10.782 1.00 7.06 ATOM 706 N GLU 27 5.329 37.472 9.385 1.00 6.14 ATOM 707 CA GLU 27 4.716 38.635 8.723 1.00 6.14 ATOM 708 C GLU 27 3.195 38.448 8.533 1.00 6.14 ATOM 709 O GLU 27 2.673 38.619 7.433 1.00 6.14 ATOM 710 CB GLU 27 5.443 38.963 7.400 1.00 6.97 ATOM 711 CG GLU 27 6.901 39.430 7.528 1.00 6.97 ATOM 712 CD GLU 27 7.113 40.756 8.301 1.00 6.97 ATOM 713 OE1 GLU 27 6.135 41.468 8.634 1.00 6.97 ATOM 714 OE2 GLU 27 8.294 41.109 8.541 1.00 6.97 ATOM 715 N LEU 28 2.478 38.057 9.600 1.00 4.96 ATOM 716 CA LEU 28 1.005 37.991 9.640 1.00 4.96 ATOM 717 C LEU 28 0.479 38.113 11.086 1.00 4.96 ATOM 718 O LEU 28 0.864 37.296 11.926 1.00 4.96 ATOM 719 CB LEU 28 0.531 36.692 8.947 1.00 5.51 ATOM 720 CG LEU 28 -0.998 36.521 8.914 1.00 5.51 ATOM 721 CD1 LEU 28 -1.491 35.801 7.656 1.00 5.51 ATOM 722 CD2 LEU 28 -1.511 35.717 10.114 1.00 5.51 ATOM 723 N ARG 29 -0.398 39.090 11.393 1.00 4.50 ATOM 724 CA ARG 29 -0.925 39.332 12.762 1.00 4.50 ATOM 725 C ARG 29 -2.217 40.187 12.825 1.00 4.50 ATOM 726 O ARG 29 -2.478 41.012 11.953 1.00 4.50 ATOM 727 CB ARG 29 0.218 39.950 13.607 1.00 4.78 ATOM 728 CG ARG 29 -0.183 40.286 15.050 1.00 4.78 ATOM 729 CD ARG 29 0.980 40.671 15.962 1.00 4.78 ATOM 730 NE ARG 29 0.446 41.110 17.267 1.00 4.78 ATOM 731 CZ ARG 29 1.068 41.799 18.207 1.00 4.78 ATOM 732 NH1 ARG 29 0.420 42.172 19.274 1.00 4.78 ATOM 733 NH2 ARG 29 2.324 42.131 18.114 1.00 4.78 ATOM 734 N VAL 30 -2.995 40.002 13.905 1.00 3.98 ATOM 735 CA VAL 30 -4.220 40.747 14.297 1.00 3.98 ATOM 736 C VAL 30 -3.992 41.782 15.422 1.00 3.98 ATOM 737 O VAL 30 -3.123 41.599 16.275 1.00 3.98 ATOM 738 CB VAL 30 -5.316 39.735 14.714 1.00 3.81 ATOM 739 CG1 VAL 30 -4.966 38.914 15.963 1.00 3.81 ATOM 740 CG2 VAL 30 -6.695 40.368 14.925 1.00 3.81 ATOM 741 N THR 31 -4.831 42.825 15.475 1.00 4.99 ATOM 742 CA THR 31 -4.951 43.817 16.571 1.00 4.99 ATOM 743 C THR 31 -6.434 44.051 16.941 1.00 4.99 ATOM 744 O THR 31 -6.998 45.132 16.777 1.00 4.99 ATOM 745 CB THR 31 -4.190 45.123 16.255 1.00 5.10 ATOM 746 OG1 THR 31 -4.508 45.635 14.978 1.00 5.10 ATOM 747 CG2 THR 31 -2.673 44.933 16.288 1.00 5.10 ATOM 748 N GLU 32 -7.082 42.990 17.442 1.00 5.52 ATOM 749 CA GLU 32 -8.529 42.822 17.726 1.00 5.52 ATOM 750 C GLU 32 -9.487 42.959 16.524 1.00 5.52 ATOM 751 O GLU 32 -10.236 42.016 16.253 1.00 5.52 ATOM 752 CB GLU 32 -9.000 43.659 18.929 1.00 6.54 ATOM 753 CG GLU 32 -8.250 43.302 20.225 1.00 6.54 ATOM 754 CD GLU 32 -9.020 43.647 21.521 1.00 6.54 ATOM 755 OE1 GLU 32 -10.054 44.359 21.488 1.00 6.54 ATOM 756 OE2 GLU 32 -8.579 43.202 22.610 1.00 6.54 ATOM 757 N ARG 33 -9.464 44.081 15.787 1.00 4.66 ATOM 758 CA ARG 33 -10.231 44.277 14.538 1.00 4.66 ATOM 759 C ARG 33 -9.302 44.472 13.327 1.00 4.66 ATOM 760 O ARG 33 -9.314 43.578 12.477 1.00 4.66 ATOM 761 CB ARG 33 -11.341 45.340 14.704 1.00 5.67 ATOM 762 CG ARG 33 -12.603 44.810 15.407 1.00 5.67 ATOM 763 CD ARG 33 -13.478 43.877 14.552 1.00 5.67 ATOM 764 NE ARG 33 -14.355 44.619 13.615 1.00 5.67 ATOM 765 CZ ARG 33 -15.577 44.270 13.238 1.00 5.67 ATOM 766 NH1 ARG 33 -16.284 45.003 12.433 1.00 5.67 ATOM 767 NH2 ARG 33 -16.142 43.176 13.653 1.00 5.67 ATOM 768 N PRO 34 -8.444 45.515 13.251 1.00 3.64 ATOM 769 CA PRO 34 -7.423 45.604 12.206 1.00 3.64 ATOM 770 C PRO 34 -6.460 44.401 12.164 1.00 3.64 ATOM 771 O PRO 34 -6.313 43.641 13.127 1.00 3.64 ATOM 772 CB PRO 34 -6.683 46.926 12.431 1.00 4.22 ATOM 773 CG PRO 34 -7.703 47.778 13.177 1.00 4.22 ATOM 774 CD PRO 34 -8.470 46.756 14.014 1.00 4.22 ATOM 775 N PHE 35 -5.808 44.224 11.015 1.00 2.61 ATOM 776 CA PHE 35 -5.010 43.048 10.662 1.00 2.61 ATOM 777 C PHE 35 -3.897 43.418 9.658 1.00 2.61 ATOM 778 O PHE 35 -3.999 44.439 8.976 1.00 2.61 ATOM 779 CB PHE 35 -5.973 41.989 10.088 1.00 3.46 ATOM 780 CG PHE 35 -5.432 40.581 10.148 1.00 3.46 ATOM 781 CD1 PHE 35 -5.774 39.743 11.225 1.00 3.46 ATOM 782 CD2 PHE 35 -4.557 40.115 9.153 1.00 3.46 ATOM 783 CE1 PHE 35 -5.186 38.471 11.344 1.00 3.46 ATOM 784 CE2 PHE 35 -3.952 38.859 9.290 1.00 3.46 ATOM 785 CZ PHE 35 -4.245 38.048 10.397 1.00 3.46 ATOM 786 N TRP 36 -2.835 42.616 9.541 1.00 2.84 ATOM 787 CA TRP 36 -1.765 42.828 8.555 1.00 2.84 ATOM 788 C TRP 36 -1.007 41.552 8.152 1.00 2.84 ATOM 789 O TRP 36 -0.935 40.587 8.915 1.00 2.84 ATOM 790 CB TRP 36 -0.801 43.915 9.055 1.00 2.84 ATOM 791 CG TRP 36 -0.318 43.829 10.472 1.00 2.84 ATOM 792 CD1 TRP 36 -0.955 44.362 11.541 1.00 2.84 ATOM 793 CD2 TRP 36 0.893 43.200 11.003 1.00 2.84 ATOM 794 NE1 TRP 36 -0.208 44.152 12.684 1.00 2.84 ATOM 795 CE2 TRP 36 0.963 43.483 12.402 1.00 2.84 ATOM 796 CE3 TRP 36 1.956 42.454 10.449 1.00 2.84 ATOM 797 CZ2 TRP 36 2.049 43.091 13.199 1.00 2.84 ATOM 798 CZ3 TRP 36 3.039 42.028 11.246 1.00 2.84 ATOM 799 CH2 TRP 36 3.093 42.352 12.614 1.00 2.84 ATOM 800 N ILE 37 -0.444 41.578 6.936 1.00 3.67 ATOM 801 CA ILE 37 0.495 40.595 6.354 1.00 3.67 ATOM 802 C ILE 37 1.839 41.329 6.087 1.00 3.67 ATOM 803 O ILE 37 2.110 42.331 6.748 1.00 3.67 ATOM 804 CB ILE 37 -0.093 39.949 5.061 1.00 4.16 ATOM 805 CG1 ILE 37 -1.633 39.803 5.019 1.00 4.16 ATOM 806 CG2 ILE 37 0.537 38.569 4.774 1.00 4.16 ATOM 807 CD1 ILE 37 -2.207 38.754 5.970 1.00 4.16 ATOM 808 N SER 38 2.692 40.852 5.166 1.00 4.92 ATOM 809 CA SER 38 3.827 41.568 4.545 1.00 4.92 ATOM 810 C SER 38 4.532 40.712 3.471 1.00 4.92 ATOM 811 O SER 38 4.207 39.536 3.293 1.00 4.92 ATOM 812 CB SER 38 4.861 42.102 5.545 1.00 5.37 ATOM 813 OG SER 38 5.156 43.436 5.160 1.00 5.37 ATOM 814 N SER 39 5.465 41.317 2.727 1.00 5.52 ATOM 815 CA SER 39 6.205 40.720 1.596 1.00 5.52 ATOM 816 C SER 39 7.548 40.062 1.981 1.00 5.52 ATOM 817 O SER 39 7.980 40.120 3.135 1.00 5.52 ATOM 818 CB SER 39 6.441 41.825 0.560 1.00 5.74 ATOM 819 OG SER 39 7.205 42.882 1.120 1.00 5.74 ATOM 820 N PHE 40 8.230 39.464 0.991 1.00 5.86 ATOM 821 CA PHE 40 9.618 38.968 1.055 1.00 5.86 ATOM 822 C PHE 40 10.470 39.778 0.047 1.00 5.86 ATOM 823 O PHE 40 10.003 40.050 -1.061 1.00 5.86 ATOM 824 CB PHE 40 9.634 37.452 0.742 1.00 6.31 ATOM 825 CG PHE 40 10.663 36.559 1.434 1.00 6.31 ATOM 826 CD1 PHE 40 10.256 35.293 1.905 1.00 6.31 ATOM 827 CD2 PHE 40 12.024 36.915 1.540 1.00 6.31 ATOM 828 CE1 PHE 40 11.187 34.407 2.479 1.00 6.31 ATOM 829 CE2 PHE 40 12.951 36.038 2.136 1.00 6.31 ATOM 830 CZ PHE 40 12.533 34.781 2.606 1.00 6.31 ATOM 831 N ILE 41 11.700 40.167 0.425 1.00 6.18 ATOM 832 CA ILE 41 12.658 40.917 -0.420 1.00 6.18 ATOM 833 C ILE 41 13.287 40.033 -1.533 1.00 6.18 ATOM 834 O ILE 41 12.555 39.476 -2.350 1.00 6.18 ATOM 835 CB ILE 41 13.610 41.754 0.482 1.00 6.68 ATOM 836 CG1 ILE 41 14.433 42.783 -0.331 1.00 6.68 ATOM 837 CG2 ILE 41 14.508 40.915 1.417 1.00 6.68 ATOM 838 CD1 ILE 41 14.977 43.938 0.522 1.00 6.68 ATOM 839 N GLY 42 14.615 39.891 -1.625 1.00 7.27 ATOM 840 CA GLY 42 15.294 39.070 -2.641 1.00 7.27 ATOM 841 C GLY 42 15.053 37.567 -2.446 1.00 7.27 ATOM 842 O GLY 42 15.824 36.893 -1.755 1.00 7.27 ATOM 843 N ARG 43 13.975 37.049 -3.051 1.00 6.95 ATOM 844 CA ARG 43 13.506 35.654 -2.969 1.00 6.95 ATOM 845 C ARG 43 12.664 35.282 -4.202 1.00 6.95 ATOM 846 O ARG 43 12.079 36.155 -4.844 1.00 6.95 ATOM 847 CB ARG 43 12.694 35.487 -1.660 1.00 6.95 ATOM 848 CG ARG 43 12.546 34.044 -1.148 1.00 6.95 ATOM 849 CD ARG 43 13.876 33.482 -0.624 1.00 6.95 ATOM 850 NE ARG 43 13.746 32.071 -0.204 1.00 6.95 ATOM 851 CZ ARG 43 14.491 31.438 0.687 1.00 6.95 ATOM 852 NH1 ARG 43 14.319 30.165 0.905 1.00 6.95 ATOM 853 NH2 ARG 43 15.422 32.041 1.372 1.00 6.95 ATOM 854 N SER 44 12.565 33.983 -4.492 1.00 7.87 ATOM 855 CA SER 44 11.811 33.413 -5.628 1.00 7.87 ATOM 856 C SER 44 10.663 32.499 -5.156 1.00 7.87 ATOM 857 O SER 44 10.505 31.372 -5.634 1.00 7.87 ATOM 858 CB SER 44 12.772 32.707 -6.599 1.00 8.76 ATOM 859 OG SER 44 13.791 33.600 -7.039 1.00 8.76 ATOM 860 N LYS 45 9.881 32.977 -4.175 1.00 6.78 ATOM 861 CA LYS 45 8.786 32.251 -3.497 1.00 6.78 ATOM 862 C LYS 45 7.484 33.065 -3.496 1.00 6.78 ATOM 863 O LYS 45 7.521 34.293 -3.450 1.00 6.78 ATOM 864 CB LYS 45 9.257 31.874 -2.079 1.00 8.17 ATOM 865 CG LYS 45 8.284 30.937 -1.346 1.00 8.17 ATOM 866 CD LYS 45 8.884 30.411 -0.036 1.00 8.17 ATOM 867 CE LYS 45 7.893 29.454 0.640 1.00 8.17 ATOM 868 NZ LYS 45 8.479 28.800 1.841 1.00 8.17 TER END