####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name S0953s2TS288_4-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name S0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap S0953s2TS288_4-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 20 22 - 41 4.95 16.73 LCS_AVERAGE: 36.21 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 7 32 - 38 1.49 16.62 LCS_AVERAGE: 11.67 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 5 32 - 36 0.89 16.77 LONGEST_CONTINUOUS_SEGMENT: 5 34 - 38 0.99 16.61 LCS_AVERAGE: 8.68 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 5 8 3 5 5 6 6 6 7 12 13 14 16 17 20 21 22 23 26 26 28 30 LCS_GDT V 3 V 3 4 5 8 4 5 5 6 7 9 12 13 13 14 16 18 20 21 22 23 26 26 28 30 LCS_GDT Q 4 Q 4 4 5 8 4 5 5 6 7 9 12 13 13 14 16 17 20 21 22 23 26 26 28 30 LCS_GDT G 5 G 5 4 5 9 4 5 5 6 6 6 6 8 8 10 12 15 17 20 21 23 26 26 28 30 LCS_GDT P 6 P 6 3 5 9 1 3 4 5 5 6 7 8 8 10 10 11 12 13 14 18 24 25 28 30 LCS_GDT W 7 W 7 3 5 10 1 3 4 4 5 6 7 7 7 10 10 11 12 13 16 18 22 23 28 30 LCS_GDT V 8 V 8 3 5 14 0 3 4 4 5 6 7 7 8 10 13 16 18 20 22 23 26 26 28 30 LCS_GDT G 9 G 9 3 5 14 1 3 4 4 5 6 7 7 10 10 13 15 18 20 22 23 26 26 28 30 LCS_GDT S 10 S 10 3 3 14 0 3 4 4 5 5 5 6 9 10 11 13 16 17 20 23 23 25 27 30 LCS_GDT S 11 S 11 3 3 14 0 3 4 4 4 4 5 7 9 9 11 13 13 14 15 16 18 22 22 24 LCS_GDT Y 12 Y 12 4 5 14 3 4 5 5 5 6 7 8 9 9 11 13 13 14 15 16 17 20 20 24 LCS_GDT V 13 V 13 4 5 14 3 4 5 5 5 6 7 8 9 9 10 13 13 14 15 16 18 22 22 24 LCS_GDT A 14 A 14 4 5 14 3 4 5 5 5 6 7 8 9 9 11 11 13 14 15 16 16 20 20 21 LCS_GDT E 15 E 15 4 5 14 3 4 5 5 5 6 7 8 9 9 11 11 13 14 14 15 16 17 18 20 LCS_GDT T 16 T 16 4 5 14 3 3 4 4 5 6 7 8 9 9 11 13 13 14 15 16 17 17 19 20 LCS_GDT G 17 G 17 4 5 14 3 4 4 4 5 6 7 8 9 9 11 13 13 14 15 16 18 22 22 24 LCS_GDT Q 18 Q 18 4 5 14 3 4 4 4 5 6 7 8 9 10 11 13 13 14 15 17 19 23 23 25 LCS_GDT N 19 N 19 4 5 14 3 4 4 4 5 6 7 8 9 10 11 14 17 20 22 23 24 26 28 30 LCS_GDT W 20 W 20 4 5 18 3 4 4 4 5 5 7 8 10 13 15 16 19 20 22 23 26 26 28 30 LCS_GDT A 21 A 21 4 5 19 3 3 4 4 7 8 11 13 13 14 16 17 20 21 22 23 26 26 28 30 LCS_GDT S 22 S 22 4 4 20 2 3 4 6 8 10 12 13 13 14 16 18 20 21 22 23 26 26 28 30 LCS_GDT L 23 L 23 3 4 20 1 3 4 7 9 10 12 13 13 14 16 18 20 21 22 23 26 26 28 30 LCS_GDT A 24 A 24 3 4 20 1 3 5 7 9 10 12 13 13 14 16 18 20 21 22 23 26 26 28 30 LCS_GDT A 25 A 25 4 6 20 4 4 4 5 5 6 7 9 11 13 16 18 20 21 22 23 26 26 28 30 LCS_GDT N 26 N 26 4 6 20 4 4 4 5 5 6 6 7 10 12 15 18 20 21 22 23 26 26 28 30 LCS_GDT E 27 E 27 4 6 20 4 4 4 5 5 7 9 11 13 14 16 18 20 21 22 23 26 26 28 30 LCS_GDT L 28 L 28 4 6 20 4 4 5 6 7 9 12 13 13 14 16 18 20 21 22 23 26 26 28 30 LCS_GDT R 29 R 29 4 6 20 0 4 5 6 7 9 12 13 13 14 16 18 20 21 22 23 26 26 28 30 LCS_GDT V 30 V 30 4 6 20 3 4 5 6 7 10 12 13 13 14 16 18 20 21 22 23 26 26 28 30 LCS_GDT T 31 T 31 4 6 20 3 4 5 6 9 10 12 13 13 14 16 18 20 21 22 23 26 26 28 30 LCS_GDT E 32 E 32 5 7 20 3 4 5 6 7 10 11 12 13 14 16 17 19 21 22 23 26 26 28 30 LCS_GDT R 33 R 33 5 7 20 3 3 5 6 9 10 12 13 13 14 16 18 20 21 22 23 26 26 28 30 LCS_GDT P 34 P 34 5 7 20 3 4 5 7 9 10 12 13 13 14 16 18 20 21 22 23 26 26 28 30 LCS_GDT F 35 F 35 5 7 20 3 4 5 7 9 10 12 13 13 14 16 18 20 21 22 23 26 26 28 30 LCS_GDT W 36 W 36 5 7 20 3 4 5 7 9 10 11 12 12 14 16 18 20 21 22 23 26 26 28 30 LCS_GDT I 37 I 37 5 7 20 4 5 5 7 9 10 11 12 12 13 16 18 20 21 22 23 26 26 28 30 LCS_GDT S 38 S 38 5 7 20 1 3 5 7 9 10 11 12 12 13 16 18 20 21 22 23 26 26 28 30 LCS_GDT S 39 S 39 3 4 20 0 3 3 4 4 5 7 8 8 12 16 18 20 21 22 23 26 26 28 30 LCS_GDT F 40 F 40 3 4 20 2 3 3 4 4 5 7 7 7 9 12 16 20 21 21 23 25 26 26 27 LCS_GDT I 41 I 41 3 4 20 2 3 3 4 4 5 7 7 7 9 12 17 20 21 21 23 25 26 26 26 LCS_GDT G 42 G 42 3 4 11 3 3 3 4 4 5 7 7 7 9 12 13 13 18 21 23 24 26 26 26 LCS_GDT R 43 R 43 3 4 11 3 3 3 3 4 4 6 6 7 8 9 9 10 10 12 13 14 14 15 15 LCS_GDT S 44 S 44 3 4 11 3 3 3 3 4 5 7 7 7 8 9 9 11 11 13 13 14 14 15 15 LCS_GDT K 45 K 45 3 3 11 0 3 3 3 3 5 7 7 7 8 9 9 11 11 13 13 14 14 15 18 LCS_AVERAGE LCS_A: 18.85 ( 8.68 11.67 36.21 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 5 5 7 9 10 12 13 13 14 16 18 20 21 22 23 26 26 28 30 GDT PERCENT_AT 9.09 11.36 11.36 15.91 20.45 22.73 27.27 29.55 29.55 31.82 36.36 40.91 45.45 47.73 50.00 52.27 59.09 59.09 63.64 68.18 GDT RMS_LOCAL 0.15 0.49 0.49 1.43 1.71 1.86 2.71 2.88 2.88 3.12 3.60 4.52 4.66 4.79 5.01 5.31 5.88 5.88 6.35 6.73 GDT RMS_ALL_AT 20.50 20.30 20.30 17.78 17.95 17.88 14.98 14.77 14.77 14.83 14.90 15.66 14.65 14.76 14.76 14.41 13.89 13.89 13.46 13.25 # Checking swapping # possible swapping detected: E 15 E 15 # possible swapping detected: E 32 E 32 # possible swapping detected: F 35 F 35 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 6.217 0 0.050 0.065 6.722 3.182 2.545 - LGA V 3 V 3 3.182 0 0.062 0.112 6.390 34.091 20.519 4.602 LGA Q 4 Q 4 2.759 0 0.338 0.516 5.948 28.636 14.545 5.618 LGA G 5 G 5 7.651 0 0.202 0.202 10.310 0.000 0.000 - LGA P 6 P 6 10.632 0 0.357 0.395 11.661 0.000 0.000 10.840 LGA W 7 W 7 11.658 0 0.469 1.324 18.541 0.000 0.000 17.640 LGA V 8 V 8 8.827 0 0.643 0.870 10.279 0.000 0.000 7.797 LGA G 9 G 9 11.111 0 0.488 0.488 12.774 0.000 0.000 - LGA S 10 S 10 16.973 0 0.658 0.845 20.401 0.000 0.000 18.413 LGA S 11 S 11 21.632 0 0.564 0.876 23.075 0.000 0.000 22.020 LGA Y 12 Y 12 23.432 0 0.637 1.229 25.688 0.000 0.000 17.622 LGA V 13 V 13 27.010 0 0.041 1.101 31.226 0.000 0.000 28.438 LGA A 14 A 14 33.567 0 0.491 0.451 35.683 0.000 0.000 - LGA E 15 E 15 33.650 0 0.173 1.130 39.315 0.000 0.000 39.211 LGA T 16 T 16 30.275 0 0.676 1.155 31.204 0.000 0.000 29.382 LGA G 17 G 17 27.864 0 0.653 0.653 28.792 0.000 0.000 - LGA Q 18 Q 18 20.493 0 0.079 1.221 25.513 0.000 0.000 22.548 LGA N 19 N 19 14.811 0 0.653 1.204 17.880 0.000 0.000 17.253 LGA W 20 W 20 9.189 0 0.080 1.198 13.398 0.000 0.000 13.135 LGA A 21 A 21 4.104 0 0.617 0.573 5.233 20.455 20.000 - LGA S 22 S 22 0.866 0 0.596 0.811 3.631 57.727 46.667 3.631 LGA L 23 L 23 3.135 0 0.655 0.629 9.244 36.364 18.182 9.244 LGA A 24 A 24 3.030 0 0.319 0.313 5.398 18.182 14.545 - LGA A 25 A 25 6.781 0 0.547 0.560 8.775 0.455 0.364 - LGA N 26 N 26 8.473 0 0.065 0.086 14.235 0.000 0.000 11.918 LGA E 27 E 27 7.469 0 0.114 0.306 12.163 0.000 0.000 12.044 LGA L 28 L 28 2.786 0 0.655 1.223 4.238 37.273 43.409 2.379 LGA R 29 R 29 2.702 0 0.581 1.509 7.732 18.636 11.570 6.946 LGA V 30 V 30 2.996 0 0.079 1.146 6.778 38.636 22.857 5.932 LGA T 31 T 31 2.335 0 0.480 0.987 4.268 32.727 32.208 1.968 LGA E 32 E 32 5.770 0 0.387 1.456 12.198 4.545 2.020 11.850 LGA R 33 R 33 1.970 0 0.646 1.287 12.854 28.182 12.066 12.854 LGA P 34 P 34 3.041 0 0.120 0.424 5.744 25.455 17.143 5.744 LGA F 35 F 35 3.252 0 0.031 1.327 6.452 9.091 37.851 1.550 LGA W 36 W 36 7.990 0 0.036 0.364 16.207 0.000 0.000 16.207 LGA I 37 I 37 8.767 0 0.644 1.118 10.078 0.000 0.000 7.835 LGA S 38 S 38 11.244 0 0.596 0.818 14.306 0.000 0.000 14.306 LGA S 39 S 39 9.600 0 0.672 0.555 10.706 0.000 0.000 10.706 LGA F 40 F 40 12.519 0 0.624 1.019 16.174 0.000 0.000 15.614 LGA I 41 I 41 13.219 0 0.120 1.097 15.564 0.000 0.000 14.815 LGA G 42 G 42 12.893 0 0.702 0.702 14.002 0.000 0.000 - LGA R 43 R 43 18.074 0 0.131 1.327 26.286 0.000 0.000 26.092 LGA S 44 S 44 20.375 0 0.578 0.519 21.657 0.000 0.000 20.397 LGA K 45 K 45 20.731 0 0.112 0.373 25.076 0.000 0.000 25.076 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 11.987 11.883 12.816 8.946 7.193 4.364 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 13 2.88 27.273 23.562 0.437 LGA_LOCAL RMSD: 2.876 Number of atoms: 13 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 14.772 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 11.987 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.723147 * X + -0.207110 * Y + 0.658911 * Z + -1.357392 Y_new = -0.553780 * X + 0.396271 * Y + 0.732323 * Z + 73.661873 Z_new = -0.412778 * X + -0.894469 * Y + 0.171869 * Z + -17.663128 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.653531 0.425502 -1.380964 [DEG: -37.4446 24.3795 -79.1234 ] ZXZ: 2.408913 1.398070 -2.709234 [DEG: 138.0206 80.1035 -155.2277 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: S0953s2TS288_4-D1 REMARK 2: S0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap S0953s2TS288_4-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 13 2.88 23.562 11.99 REMARK ---------------------------------------------------------- MOLECULE S0953s2TS288_4-D1 PFRMAT TS TARGET S0953s2 MODEL 4 REFINED PARENT N/A ATOM 525 N ALA 2 15.927 38.518 10.490 1.00 5.87 ATOM 526 CA ALA 2 14.782 38.718 9.589 1.00 5.87 ATOM 527 C ALA 2 13.605 37.803 10.000 1.00 5.87 ATOM 528 O ALA 2 13.825 36.671 10.443 1.00 5.87 ATOM 529 CB ALA 2 15.210 38.450 8.138 1.00 6.07 ATOM 530 N VAL 3 12.366 38.284 9.857 1.00 4.38 ATOM 531 CA VAL 3 11.135 37.639 10.368 1.00 4.38 ATOM 532 C VAL 3 10.175 37.249 9.229 1.00 4.38 ATOM 533 O VAL 3 10.138 37.911 8.191 1.00 4.38 ATOM 534 CB VAL 3 10.455 38.540 11.424 1.00 4.26 ATOM 535 CG1 VAL 3 9.298 37.822 12.130 1.00 4.26 ATOM 536 CG2 VAL 3 11.438 38.989 12.515 1.00 4.26 ATOM 537 N GLN 4 9.418 36.159 9.411 1.00 4.10 ATOM 538 CA GLN 4 8.545 35.546 8.394 1.00 4.10 ATOM 539 C GLN 4 7.047 35.848 8.665 1.00 4.10 ATOM 540 O GLN 4 6.667 37.016 8.695 1.00 4.10 ATOM 541 CB GLN 4 8.914 34.051 8.246 1.00 4.55 ATOM 542 CG GLN 4 10.376 33.839 7.791 1.00 4.55 ATOM 543 CD GLN 4 10.816 32.371 7.752 1.00 4.55 ATOM 544 OE1 GLN 4 10.092 31.443 8.095 1.00 4.55 ATOM 545 NE2 GLN 4 12.037 32.096 7.338 1.00 4.55 ATOM 546 N GLY 5 6.187 34.837 8.864 1.00 4.13 ATOM 547 CA GLY 5 4.719 34.954 9.017 1.00 4.13 ATOM 548 C GLY 5 4.197 36.173 9.821 1.00 4.13 ATOM 549 O GLY 5 4.623 36.359 10.963 1.00 4.13 ATOM 550 N PRO 6 3.266 36.988 9.268 1.00 3.49 ATOM 551 CA PRO 6 2.644 38.141 9.935 1.00 3.49 ATOM 552 C PRO 6 1.125 37.936 10.142 1.00 3.49 ATOM 553 O PRO 6 0.706 37.495 11.209 1.00 3.49 ATOM 554 CB PRO 6 2.999 39.333 9.040 1.00 3.65 ATOM 555 CG PRO 6 3.225 38.708 7.670 1.00 3.65 ATOM 556 CD PRO 6 3.112 37.201 7.839 1.00 3.65 ATOM 557 N TRP 7 0.295 38.207 9.126 1.00 3.82 ATOM 558 CA TRP 7 -1.137 37.872 9.071 1.00 3.82 ATOM 559 C TRP 7 -1.589 37.629 7.624 1.00 3.82 ATOM 560 O TRP 7 -0.826 37.863 6.683 1.00 3.82 ATOM 561 CB TRP 7 -2.000 38.948 9.746 1.00 5.32 ATOM 562 CG TRP 7 -2.243 40.232 9.009 1.00 5.32 ATOM 563 CD1 TRP 7 -3.402 40.601 8.414 1.00 5.32 ATOM 564 CD2 TRP 7 -1.344 41.368 8.851 1.00 5.32 ATOM 565 NE1 TRP 7 -3.304 41.909 7.983 1.00 5.32 ATOM 566 CE2 TRP 7 -2.043 42.420 8.193 1.00 5.32 ATOM 567 CE3 TRP 7 -0.022 41.632 9.248 1.00 5.32 ATOM 568 CZ2 TRP 7 -1.445 43.657 7.922 1.00 5.32 ATOM 569 CZ3 TRP 7 0.624 42.830 8.889 1.00 5.32 ATOM 570 CH2 TRP 7 -0.086 43.836 8.214 1.00 5.32 ATOM 571 N VAL 8 -2.827 37.160 7.442 1.00 4.29 ATOM 572 CA VAL 8 -3.435 36.931 6.122 1.00 4.29 ATOM 573 C VAL 8 -4.929 37.257 6.138 1.00 4.29 ATOM 574 O VAL 8 -5.631 37.013 7.123 1.00 4.29 ATOM 575 CB VAL 8 -3.131 35.504 5.608 1.00 4.45 ATOM 576 CG1 VAL 8 -3.790 34.397 6.441 1.00 4.45 ATOM 577 CG2 VAL 8 -3.556 35.301 4.149 1.00 4.45 ATOM 578 N GLY 9 -5.416 37.819 5.035 1.00 4.76 ATOM 579 CA GLY 9 -6.831 38.112 4.815 1.00 4.76 ATOM 580 C GLY 9 -7.191 38.120 3.331 1.00 4.76 ATOM 581 O GLY 9 -6.321 38.033 2.464 1.00 4.76 ATOM 582 N SER 10 -8.485 38.236 3.042 1.00 5.75 ATOM 583 CA SER 10 -9.001 38.387 1.678 1.00 5.75 ATOM 584 C SER 10 -10.102 39.448 1.640 1.00 5.75 ATOM 585 O SER 10 -10.903 39.539 2.571 1.00 5.75 ATOM 586 CB SER 10 -9.480 37.036 1.138 1.00 6.11 ATOM 587 OG SER 10 -9.695 37.098 -0.263 1.00 6.11 ATOM 588 N SER 11 -10.126 40.272 0.597 1.00 6.49 ATOM 589 CA SER 11 -11.064 41.391 0.428 1.00 6.49 ATOM 590 C SER 11 -11.496 41.565 -1.035 1.00 6.49 ATOM 591 O SER 11 -10.990 40.893 -1.940 1.00 6.49 ATOM 592 CB SER 11 -10.430 42.681 0.971 1.00 6.66 ATOM 593 OG SER 11 -10.747 42.840 2.341 1.00 6.66 ATOM 594 N TYR 12 -12.462 42.462 -1.263 1.00 7.63 ATOM 595 CA TYR 12 -13.011 42.791 -2.583 1.00 7.63 ATOM 596 C TYR 12 -12.858 44.292 -2.883 1.00 7.63 ATOM 597 O TYR 12 -13.198 45.135 -2.053 1.00 7.63 ATOM 598 CB TYR 12 -14.489 42.376 -2.654 1.00 8.65 ATOM 599 CG TYR 12 -14.788 40.883 -2.662 1.00 8.65 ATOM 600 CD1 TYR 12 -14.623 40.103 -1.498 1.00 8.65 ATOM 601 CD2 TYR 12 -15.303 40.282 -3.829 1.00 8.65 ATOM 602 CE1 TYR 12 -14.944 38.731 -1.504 1.00 8.65 ATOM 603 CE2 TYR 12 -15.638 38.914 -3.837 1.00 8.65 ATOM 604 CZ TYR 12 -15.449 38.131 -2.678 1.00 8.65 ATOM 605 OH TYR 12 -15.752 36.802 -2.706 1.00 8.65 ATOM 606 N VAL 13 -12.381 44.634 -4.086 1.00 9.04 ATOM 607 CA VAL 13 -12.191 46.031 -4.535 1.00 9.04 ATOM 608 C VAL 13 -13.517 46.772 -4.768 1.00 9.04 ATOM 609 O VAL 13 -13.667 47.923 -4.358 1.00 9.04 ATOM 610 CB VAL 13 -11.266 46.078 -5.777 1.00 9.56 ATOM 611 CG1 VAL 13 -11.767 45.257 -6.976 1.00 9.56 ATOM 612 CG2 VAL 13 -11.018 47.505 -6.278 1.00 9.56 ATOM 613 N ALA 14 -14.492 46.112 -5.398 1.00 9.61 ATOM 614 CA ALA 14 -15.751 46.714 -5.840 1.00 9.61 ATOM 615 C ALA 14 -16.839 46.682 -4.741 1.00 9.61 ATOM 616 O ALA 14 -17.873 46.030 -4.886 1.00 9.61 ATOM 617 CB ALA 14 -16.158 46.042 -7.159 1.00 9.69 ATOM 618 N GLU 15 -16.592 47.388 -3.631 1.00 10.48 ATOM 619 CA GLU 15 -17.523 47.655 -2.507 1.00 10.48 ATOM 620 C GLU 15 -17.994 46.436 -1.665 1.00 10.48 ATOM 621 O GLU 15 -18.664 46.618 -0.643 1.00 10.48 ATOM 622 CB GLU 15 -18.724 48.503 -2.990 1.00 10.89 ATOM 623 CG GLU 15 -18.339 49.816 -3.697 1.00 10.89 ATOM 624 CD GLU 15 -19.557 50.561 -4.290 1.00 10.89 ATOM 625 OE1 GLU 15 -20.694 50.441 -3.767 1.00 10.89 ATOM 626 OE2 GLU 15 -19.382 51.298 -5.291 1.00 10.89 ATOM 627 N THR 16 -17.649 45.202 -2.050 1.00 10.38 ATOM 628 CA THR 16 -18.050 43.936 -1.385 1.00 10.38 ATOM 629 C THR 16 -17.230 43.627 -0.104 1.00 10.38 ATOM 630 O THR 16 -16.261 44.323 0.214 1.00 10.38 ATOM 631 CB THR 16 -18.064 42.808 -2.449 1.00 10.32 ATOM 632 OG1 THR 16 -19.105 43.088 -3.366 1.00 10.32 ATOM 633 CG2 THR 16 -18.318 41.375 -1.971 1.00 10.32 ATOM 634 N GLY 17 -17.667 42.620 0.672 1.00 9.55 ATOM 635 CA GLY 17 -17.194 42.224 2.012 1.00 9.55 ATOM 636 C GLY 17 -15.741 41.727 2.165 1.00 9.55 ATOM 637 O GLY 17 -14.866 41.997 1.340 1.00 9.55 ATOM 638 N GLN 18 -15.472 41.028 3.278 1.00 9.12 ATOM 639 CA GLN 18 -14.121 40.662 3.746 1.00 9.12 ATOM 640 C GLN 18 -14.034 39.291 4.443 1.00 9.12 ATOM 641 O GLN 18 -15.022 38.761 4.957 1.00 9.12 ATOM 642 CB GLN 18 -13.612 41.708 4.763 1.00 9.76 ATOM 643 CG GLN 18 -13.625 43.165 4.282 1.00 9.76 ATOM 644 CD GLN 18 -14.967 43.880 4.467 1.00 9.76 ATOM 645 OE1 GLN 18 -15.673 43.725 5.455 1.00 9.76 ATOM 646 NE2 GLN 18 -15.374 44.707 3.526 1.00 9.76 ATOM 647 N ASN 19 -12.803 38.774 4.521 1.00 8.57 ATOM 648 CA ASN 19 -12.374 37.637 5.336 1.00 8.57 ATOM 649 C ASN 19 -11.096 38.027 6.102 1.00 8.57 ATOM 650 O ASN 19 -10.159 38.574 5.511 1.00 8.57 ATOM 651 CB ASN 19 -12.114 36.397 4.460 1.00 8.98 ATOM 652 CG ASN 19 -13.330 35.925 3.682 1.00 8.98 ATOM 653 OD1 ASN 19 -14.185 35.213 4.192 1.00 8.98 ATOM 654 ND2 ASN 19 -13.436 36.275 2.418 1.00 8.98 ATOM 655 N TRP 20 -11.036 37.700 7.392 1.00 7.06 ATOM 656 CA TRP 20 -9.849 37.804 8.253 1.00 7.06 ATOM 657 C TRP 20 -9.537 36.431 8.867 1.00 7.06 ATOM 658 O TRP 20 -10.452 35.648 9.139 1.00 7.06 ATOM 659 CB TRP 20 -10.054 38.883 9.334 1.00 6.26 ATOM 660 CG TRP 20 -11.297 38.781 10.174 1.00 6.26 ATOM 661 CD1 TRP 20 -11.383 38.219 11.402 1.00 6.26 ATOM 662 CD2 TRP 20 -12.648 39.244 9.856 1.00 6.26 ATOM 663 NE1 TRP 20 -12.686 38.288 11.858 1.00 6.26 ATOM 664 CE2 TRP 20 -13.511 38.911 10.945 1.00 6.26 ATOM 665 CE3 TRP 20 -13.231 39.917 8.759 1.00 6.26 ATOM 666 CZ2 TRP 20 -14.880 39.218 10.942 1.00 6.26 ATOM 667 CZ3 TRP 20 -14.606 40.229 8.745 1.00 6.26 ATOM 668 CH2 TRP 20 -15.430 39.881 9.830 1.00 6.26 ATOM 669 N ALA 21 -8.250 36.123 9.074 1.00 6.89 ATOM 670 CA ALA 21 -7.802 34.810 9.545 1.00 6.89 ATOM 671 C ALA 21 -6.689 34.910 10.605 1.00 6.89 ATOM 672 O ALA 21 -5.698 35.625 10.441 1.00 6.89 ATOM 673 CB ALA 21 -7.391 33.967 8.335 1.00 7.14 ATOM 674 N SER 22 -6.876 34.184 11.710 1.00 6.38 ATOM 675 CA SER 22 -6.039 34.264 12.912 1.00 6.38 ATOM 676 C SER 22 -4.782 33.386 12.824 1.00 6.38 ATOM 677 O SER 22 -4.874 32.162 12.685 1.00 6.38 ATOM 678 CB SER 22 -6.885 33.871 14.129 1.00 6.79 ATOM 679 OG SER 22 -6.143 33.998 15.331 1.00 6.79 ATOM 680 N LEU 23 -3.607 34.018 12.928 1.00 6.24 ATOM 681 CA LEU 23 -2.297 33.380 13.137 1.00 6.24 ATOM 682 C LEU 23 -1.798 33.800 14.538 1.00 6.24 ATOM 683 O LEU 23 -2.137 34.895 14.998 1.00 6.24 ATOM 684 CB LEU 23 -1.305 33.749 12.009 1.00 6.55 ATOM 685 CG LEU 23 -1.804 33.533 10.562 1.00 6.55 ATOM 686 CD1 LEU 23 -0.729 33.979 9.567 1.00 6.55 ATOM 687 CD2 LEU 23 -2.134 32.073 10.242 1.00 6.55 ATOM 688 N ALA 24 -1.004 32.963 15.223 1.00 6.50 ATOM 689 CA ALA 24 -0.701 33.155 16.656 1.00 6.50 ATOM 690 C ALA 24 0.763 32.903 17.104 1.00 6.50 ATOM 691 O ALA 24 1.006 32.643 18.288 1.00 6.50 ATOM 692 CB ALA 24 -1.722 32.322 17.448 1.00 6.79 ATOM 693 N ALA 25 1.749 32.971 16.196 1.00 6.85 ATOM 694 CA ALA 25 3.176 32.836 16.542 1.00 6.85 ATOM 695 C ALA 25 3.709 33.977 17.450 1.00 6.85 ATOM 696 O ALA 25 3.027 34.974 17.696 1.00 6.85 ATOM 697 CB ALA 25 4.003 32.694 15.256 1.00 7.03 ATOM 698 N ASN 26 4.942 33.832 17.955 1.00 6.92 ATOM 699 CA ASN 26 5.508 34.706 18.998 1.00 6.92 ATOM 700 C ASN 26 5.858 36.138 18.537 1.00 6.92 ATOM 701 O ASN 26 5.777 37.072 19.341 1.00 6.92 ATOM 702 CB ASN 26 6.749 34.017 19.596 1.00 7.52 ATOM 703 CG ASN 26 6.458 32.687 20.280 1.00 7.52 ATOM 704 OD1 ASN 26 5.361 32.406 20.745 1.00 7.52 ATOM 705 ND2 ASN 26 7.437 31.813 20.362 1.00 7.52 ATOM 706 N GLU 27 6.258 36.331 17.274 1.00 6.08 ATOM 707 CA GLU 27 6.691 37.648 16.765 1.00 6.08 ATOM 708 C GLU 27 5.487 38.538 16.383 1.00 6.08 ATOM 709 O GLU 27 5.401 39.705 16.773 1.00 6.08 ATOM 710 CB GLU 27 7.649 37.462 15.569 1.00 7.00 ATOM 711 CG GLU 27 8.805 36.471 15.799 1.00 7.00 ATOM 712 CD GLU 27 9.609 36.753 17.085 1.00 7.00 ATOM 713 OE1 GLU 27 10.495 37.642 17.064 1.00 7.00 ATOM 714 OE2 GLU 27 9.395 36.062 18.110 1.00 7.00 ATOM 715 N LEU 28 4.537 37.967 15.634 1.00 5.15 ATOM 716 CA LEU 28 3.264 38.584 15.231 1.00 5.15 ATOM 717 C LEU 28 2.233 38.663 16.383 1.00 5.15 ATOM 718 O LEU 28 2.378 37.996 17.410 1.00 5.15 ATOM 719 CB LEU 28 2.721 37.789 14.026 1.00 5.53 ATOM 720 CG LEU 28 2.272 36.348 14.367 1.00 5.53 ATOM 721 CD1 LEU 28 0.770 36.257 14.610 1.00 5.53 ATOM 722 CD2 LEU 28 2.617 35.375 13.240 1.00 5.53 ATOM 723 N ARG 29 1.152 39.437 16.187 1.00 4.95 ATOM 724 CA ARG 29 -0.033 39.520 17.072 1.00 4.95 ATOM 725 C ARG 29 -1.348 39.662 16.274 1.00 4.95 ATOM 726 O ARG 29 -1.343 39.948 15.077 1.00 4.95 ATOM 727 CB ARG 29 0.145 40.671 18.087 1.00 6.19 ATOM 728 CG ARG 29 1.280 40.434 19.101 1.00 6.19 ATOM 729 CD ARG 29 1.229 41.419 20.276 1.00 6.19 ATOM 730 NE ARG 29 0.043 41.178 21.126 1.00 6.19 ATOM 731 CZ ARG 29 -0.559 42.040 21.927 1.00 6.19 ATOM 732 NH1 ARG 29 -1.664 41.707 22.531 1.00 6.19 ATOM 733 NH2 ARG 29 -0.089 43.236 22.144 1.00 6.19 ATOM 734 N VAL 30 -2.487 39.460 16.945 1.00 4.89 ATOM 735 CA VAL 30 -3.847 39.418 16.360 1.00 4.89 ATOM 736 C VAL 30 -4.882 40.077 17.289 1.00 4.89 ATOM 737 O VAL 30 -4.926 39.766 18.481 1.00 4.89 ATOM 738 CB VAL 30 -4.245 37.962 15.998 1.00 5.17 ATOM 739 CG1 VAL 30 -3.961 36.934 17.107 1.00 5.17 ATOM 740 CG2 VAL 30 -5.727 37.831 15.615 1.00 5.17 ATOM 741 N THR 31 -5.742 40.948 16.734 1.00 6.09 ATOM 742 CA THR 31 -6.837 41.631 17.459 1.00 6.09 ATOM 743 C THR 31 -8.071 41.778 16.554 1.00 6.09 ATOM 744 O THR 31 -8.302 42.814 15.938 1.00 6.09 ATOM 745 CB THR 31 -6.374 42.991 18.030 1.00 6.59 ATOM 746 OG1 THR 31 -5.300 42.801 18.933 1.00 6.59 ATOM 747 CG2 THR 31 -7.462 43.735 18.815 1.00 6.59 ATOM 748 N GLU 32 -8.871 40.712 16.456 1.00 6.47 ATOM 749 CA GLU 32 -10.043 40.611 15.564 1.00 6.47 ATOM 750 C GLU 32 -9.692 40.884 14.082 1.00 6.47 ATOM 751 O GLU 32 -9.025 40.053 13.457 1.00 6.47 ATOM 752 CB GLU 32 -11.250 41.418 16.098 1.00 7.77 ATOM 753 CG GLU 32 -11.610 41.066 17.552 1.00 7.77 ATOM 754 CD GLU 32 -13.012 41.549 17.983 1.00 7.77 ATOM 755 OE1 GLU 32 -13.612 42.438 17.330 1.00 7.77 ATOM 756 OE2 GLU 32 -13.529 41.039 19.008 1.00 7.77 ATOM 757 N ARG 33 -10.144 42.013 13.511 1.00 5.01 ATOM 758 CA ARG 33 -9.942 42.390 12.098 1.00 5.01 ATOM 759 C ARG 33 -8.657 43.202 11.806 1.00 5.01 ATOM 760 O ARG 33 -7.999 42.856 10.823 1.00 5.01 ATOM 761 CB ARG 33 -11.250 42.923 11.477 1.00 5.70 ATOM 762 CG ARG 33 -12.015 44.027 12.234 1.00 5.70 ATOM 763 CD ARG 33 -13.501 43.991 11.856 1.00 5.70 ATOM 764 NE ARG 33 -14.264 45.060 12.531 1.00 5.70 ATOM 765 CZ ARG 33 -15.346 45.667 12.071 1.00 5.70 ATOM 766 NH1 ARG 33 -15.923 46.605 12.768 1.00 5.70 ATOM 767 NH2 ARG 33 -15.880 45.353 10.925 1.00 5.70 ATOM 768 N PRO 34 -8.233 44.214 12.598 1.00 5.21 ATOM 769 CA PRO 34 -6.899 44.812 12.459 1.00 5.21 ATOM 770 C PRO 34 -5.796 43.943 13.094 1.00 5.21 ATOM 771 O PRO 34 -5.945 43.431 14.205 1.00 5.21 ATOM 772 CB PRO 34 -6.992 46.178 13.138 1.00 5.85 ATOM 773 CG PRO 34 -8.052 45.967 14.217 1.00 5.85 ATOM 774 CD PRO 34 -9.019 44.985 13.554 1.00 5.85 ATOM 775 N PHE 35 -4.651 43.815 12.420 1.00 4.50 ATOM 776 CA PHE 35 -3.506 43.030 12.906 1.00 4.50 ATOM 777 C PHE 35 -2.352 43.900 13.415 1.00 4.50 ATOM 778 O PHE 35 -2.238 45.079 13.075 1.00 4.50 ATOM 779 CB PHE 35 -3.064 42.035 11.835 1.00 4.22 ATOM 780 CG PHE 35 -4.041 40.884 11.718 1.00 4.22 ATOM 781 CD1 PHE 35 -5.217 41.027 10.959 1.00 4.22 ATOM 782 CD2 PHE 35 -3.802 39.684 12.416 1.00 4.22 ATOM 783 CE1 PHE 35 -6.151 39.980 10.897 1.00 4.22 ATOM 784 CE2 PHE 35 -4.728 38.629 12.339 1.00 4.22 ATOM 785 CZ PHE 35 -5.908 38.781 11.589 1.00 4.22 ATOM 786 N TRP 36 -1.509 43.294 14.257 1.00 4.56 ATOM 787 CA TRP 36 -0.459 43.971 15.018 1.00 4.56 ATOM 788 C TRP 36 0.874 43.215 14.882 1.00 4.56 ATOM 789 O TRP 36 0.912 41.985 14.882 1.00 4.56 ATOM 790 CB TRP 36 -0.903 44.140 16.481 1.00 5.31 ATOM 791 CG TRP 36 -2.103 45.017 16.731 1.00 5.31 ATOM 792 CD1 TRP 36 -3.386 44.693 16.445 1.00 5.31 ATOM 793 CD2 TRP 36 -2.168 46.340 17.362 1.00 5.31 ATOM 794 NE1 TRP 36 -4.228 45.722 16.817 1.00 5.31 ATOM 795 CE2 TRP 36 -3.539 46.736 17.441 1.00 5.31 ATOM 796 CE3 TRP 36 -1.219 47.228 17.917 1.00 5.31 ATOM 797 CZ2 TRP 36 -3.951 47.926 18.063 1.00 5.31 ATOM 798 CZ3 TRP 36 -1.620 48.421 18.553 1.00 5.31 ATOM 799 CH2 TRP 36 -2.983 48.766 18.637 1.00 5.31 ATOM 800 N ILE 37 1.975 43.951 14.751 1.00 3.92 ATOM 801 CA ILE 37 3.312 43.430 14.425 1.00 3.92 ATOM 802 C ILE 37 4.333 44.028 15.395 1.00 3.92 ATOM 803 O ILE 37 4.413 45.249 15.464 1.00 3.92 ATOM 804 CB ILE 37 3.634 43.807 12.956 1.00 3.96 ATOM 805 CG1 ILE 37 2.745 43.068 11.932 1.00 3.96 ATOM 806 CG2 ILE 37 5.109 43.592 12.599 1.00 3.96 ATOM 807 CD1 ILE 37 2.897 41.539 11.911 1.00 3.96 ATOM 808 N SER 38 5.130 43.216 16.106 1.00 4.11 ATOM 809 CA SER 38 6.104 43.712 17.099 1.00 4.11 ATOM 810 C SER 38 7.532 43.220 16.833 1.00 4.11 ATOM 811 O SER 38 7.835 42.034 16.993 1.00 4.11 ATOM 812 CB SER 38 5.641 43.380 18.520 1.00 4.34 ATOM 813 OG SER 38 6.422 44.113 19.451 1.00 4.34 ATOM 814 N SER 39 8.407 44.130 16.387 1.00 4.04 ATOM 815 CA SER 39 9.790 43.839 15.968 1.00 4.04 ATOM 816 C SER 39 10.848 44.249 17.003 1.00 4.04 ATOM 817 O SER 39 10.658 45.212 17.741 1.00 4.04 ATOM 818 CB SER 39 10.055 44.493 14.610 1.00 4.23 ATOM 819 OG SER 39 9.829 45.893 14.606 1.00 4.23 ATOM 820 N PHE 40 11.978 43.533 17.041 1.00 3.90 ATOM 821 CA PHE 40 13.131 43.805 17.919 1.00 3.90 ATOM 822 C PHE 40 14.287 44.477 17.146 1.00 3.90 ATOM 823 O PHE 40 14.234 44.631 15.923 1.00 3.90 ATOM 824 CB PHE 40 13.590 42.498 18.602 1.00 5.10 ATOM 825 CG PHE 40 12.545 41.820 19.476 1.00 5.10 ATOM 826 CD1 PHE 40 11.507 41.072 18.886 1.00 5.10 ATOM 827 CD2 PHE 40 12.609 41.924 20.881 1.00 5.10 ATOM 828 CE1 PHE 40 10.514 40.478 19.686 1.00 5.10 ATOM 829 CE2 PHE 40 11.626 41.312 21.683 1.00 5.10 ATOM 830 CZ PHE 40 10.572 40.601 21.084 1.00 5.10 ATOM 831 N ILE 41 15.356 44.856 17.854 1.00 4.58 ATOM 832 CA ILE 41 16.597 45.404 17.280 1.00 4.58 ATOM 833 C ILE 41 17.804 45.035 18.165 1.00 4.58 ATOM 834 O ILE 41 17.639 44.804 19.368 1.00 4.58 ATOM 835 CB ILE 41 16.434 46.932 17.063 1.00 4.79 ATOM 836 CG1 ILE 41 17.381 47.531 16.007 1.00 4.79 ATOM 837 CG2 ILE 41 16.589 47.730 18.367 1.00 4.79 ATOM 838 CD1 ILE 41 17.020 47.115 14.577 1.00 4.79 ATOM 839 N GLY 42 19.006 44.988 17.586 1.00 5.43 ATOM 840 CA GLY 42 20.281 44.824 18.301 1.00 5.43 ATOM 841 C GLY 42 21.314 45.879 17.887 1.00 5.43 ATOM 842 O GLY 42 21.100 46.636 16.935 1.00 5.43 ATOM 843 N ARG 43 22.436 45.964 18.612 1.00 5.80 ATOM 844 CA ARG 43 23.426 47.042 18.443 1.00 5.80 ATOM 845 C ARG 43 24.026 47.061 17.029 1.00 5.80 ATOM 846 O ARG 43 24.600 46.070 16.575 1.00 5.80 ATOM 847 CB ARG 43 24.493 46.927 19.541 1.00 7.05 ATOM 848 CG ARG 43 25.582 48.005 19.438 1.00 7.05 ATOM 849 CD ARG 43 26.445 47.991 20.702 1.00 7.05 ATOM 850 NE ARG 43 27.591 48.912 20.583 1.00 7.05 ATOM 851 CZ ARG 43 28.340 49.368 21.573 1.00 7.05 ATOM 852 NH1 ARG 43 29.357 50.142 21.327 1.00 7.05 ATOM 853 NH2 ARG 43 28.097 49.067 22.819 1.00 7.05 ATOM 854 N SER 44 23.893 48.206 16.350 1.00 5.83 ATOM 855 CA SER 44 24.389 48.467 14.984 1.00 5.83 ATOM 856 C SER 44 23.878 47.482 13.910 1.00 5.83 ATOM 857 O SER 44 24.551 47.263 12.897 1.00 5.83 ATOM 858 CB SER 44 25.923 48.597 14.972 1.00 6.47 ATOM 859 OG SER 44 26.362 49.539 15.946 1.00 6.47 ATOM 860 N LYS 45 22.697 46.875 14.120 1.00 4.77 ATOM 861 CA LYS 45 22.141 45.784 13.296 1.00 4.77 ATOM 862 C LYS 45 20.661 46.040 12.985 1.00 4.77 ATOM 863 O LYS 45 19.867 46.223 13.903 1.00 4.77 ATOM 864 CB LYS 45 22.376 44.450 14.045 1.00 4.94 ATOM 865 CG LYS 45 22.852 43.314 13.125 1.00 4.94 ATOM 866 CD LYS 45 23.406 42.140 13.950 1.00 4.94 ATOM 867 CE LYS 45 24.056 41.095 13.033 1.00 4.94 ATOM 868 NZ LYS 45 24.760 40.036 13.808 1.00 4.94 TER END