####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name S0953s2TS288_2-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name S0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap S0953s2TS288_2-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 21 21 - 41 4.88 15.34 LONGEST_CONTINUOUS_SEGMENT: 21 22 - 42 4.83 15.50 LCS_AVERAGE: 40.19 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 30 - 38 1.95 14.87 LCS_AVERAGE: 14.36 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 5 10 - 14 0.97 28.27 LONGEST_CONTINUOUS_SEGMENT: 5 13 - 17 0.82 27.99 LONGEST_CONTINUOUS_SEGMENT: 5 14 - 18 0.89 25.64 LCS_AVERAGE: 8.42 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 6 8 0 4 5 5 7 8 10 11 12 15 18 19 21 23 24 26 27 28 30 32 LCS_GDT V 3 V 3 3 6 8 0 4 5 7 7 8 10 11 12 15 18 19 21 23 24 26 27 28 30 32 LCS_GDT Q 4 Q 4 3 6 8 1 4 5 5 7 8 10 11 12 15 18 19 20 22 23 26 27 28 30 32 LCS_GDT G 5 G 5 3 6 10 0 3 4 5 6 7 10 11 12 14 16 17 19 21 23 25 27 28 30 32 LCS_GDT P 6 P 6 3 6 16 1 3 4 5 6 7 10 11 12 14 16 17 19 21 23 25 27 28 30 32 LCS_GDT W 7 W 7 3 6 16 1 3 4 4 6 6 6 8 9 14 16 17 19 21 23 25 27 28 30 32 LCS_GDT V 8 V 8 3 4 16 1 3 4 4 5 7 10 11 11 14 16 17 19 21 23 25 27 28 30 32 LCS_GDT G 9 G 9 3 4 16 0 3 4 4 6 7 10 11 11 14 16 17 19 21 23 25 27 28 30 32 LCS_GDT S 10 S 10 5 5 16 3 4 5 5 7 7 9 10 11 13 14 16 18 20 21 22 25 27 29 30 LCS_GDT S 11 S 11 5 5 16 3 4 5 5 6 7 9 10 11 13 14 14 15 15 17 18 21 23 25 26 LCS_GDT Y 12 Y 12 5 5 16 3 4 5 5 5 6 7 9 11 13 14 14 14 15 17 18 20 22 22 24 LCS_GDT V 13 V 13 5 8 16 3 4 5 5 5 8 8 10 11 13 14 15 16 16 18 19 21 23 25 26 LCS_GDT A 14 A 14 5 8 16 3 4 6 6 7 8 9 10 11 13 14 14 15 15 17 18 21 22 22 24 LCS_GDT E 15 E 15 5 8 16 3 4 6 6 7 8 9 10 11 13 14 14 15 15 17 18 20 22 22 24 LCS_GDT T 16 T 16 5 8 16 3 4 6 6 7 8 9 10 11 13 14 15 16 16 18 18 21 23 25 26 LCS_GDT G 17 G 17 5 8 16 3 4 6 6 7 8 9 10 11 13 14 15 16 16 18 21 22 23 25 26 LCS_GDT Q 18 Q 18 5 8 16 4 4 6 6 7 8 10 11 11 13 14 16 18 20 22 23 24 27 29 30 LCS_GDT N 19 N 19 4 8 16 4 4 6 6 7 8 10 11 12 14 16 17 19 21 23 25 27 28 30 32 LCS_GDT W 20 W 20 4 8 19 4 4 5 5 6 8 10 11 12 15 18 19 21 22 24 26 27 28 30 32 LCS_GDT A 21 A 21 4 6 21 4 4 4 5 7 8 10 11 12 15 18 19 21 23 24 26 27 28 30 32 LCS_GDT S 22 S 22 3 6 21 1 3 4 5 6 9 12 12 13 15 18 19 21 23 24 26 27 28 30 32 LCS_GDT L 23 L 23 3 4 21 3 3 3 4 6 9 12 12 13 15 18 19 21 23 24 26 27 28 30 32 LCS_GDT A 24 A 24 3 4 21 3 3 3 4 4 8 12 12 12 15 18 19 21 23 24 26 27 28 30 32 LCS_GDT A 25 A 25 3 5 21 3 3 4 4 5 6 7 8 10 15 18 19 21 23 24 26 27 28 30 32 LCS_GDT N 26 N 26 3 5 21 3 3 4 4 4 5 6 7 8 11 13 17 21 22 24 26 27 28 30 32 LCS_GDT E 27 E 27 3 5 21 3 3 4 4 5 6 8 9 12 13 15 17 21 23 24 26 27 28 30 32 LCS_GDT L 28 L 28 3 6 21 3 3 4 5 7 8 10 11 13 15 18 19 21 23 24 26 27 28 30 32 LCS_GDT R 29 R 29 4 6 21 3 4 4 5 6 8 10 11 13 15 18 19 21 23 24 26 27 28 30 32 LCS_GDT V 30 V 30 4 9 21 3 4 4 6 8 9 12 12 13 15 18 19 21 23 24 26 27 28 30 32 LCS_GDT T 31 T 31 4 9 21 3 4 4 5 8 9 12 12 13 15 18 19 21 23 24 26 27 28 30 32 LCS_GDT E 32 E 32 4 9 21 3 4 4 5 7 9 12 12 13 14 15 18 20 23 23 26 27 28 30 32 LCS_GDT R 33 R 33 4 9 21 3 3 4 7 8 9 12 12 13 15 18 19 21 23 24 26 27 28 30 32 LCS_GDT P 34 P 34 4 9 21 3 4 5 7 8 9 12 12 13 15 18 19 21 23 24 26 27 28 30 32 LCS_GDT F 35 F 35 4 9 21 3 4 5 7 8 9 12 12 13 15 18 19 21 23 24 26 27 28 30 32 LCS_GDT W 36 W 36 4 9 21 3 4 5 7 8 9 12 12 13 15 18 19 21 23 24 26 27 28 30 32 LCS_GDT I 37 I 37 4 9 21 3 4 5 7 8 9 12 12 13 15 18 19 21 23 24 26 27 28 30 32 LCS_GDT S 38 S 38 4 9 21 3 4 5 7 8 9 12 12 13 15 18 19 21 23 24 26 27 28 30 32 LCS_GDT S 39 S 39 3 4 21 3 3 3 3 5 6 7 9 13 15 18 19 21 23 24 26 27 28 30 32 LCS_GDT F 40 F 40 3 4 21 3 3 3 3 4 4 6 9 9 11 13 18 21 23 24 26 26 26 29 32 LCS_GDT I 41 I 41 3 4 21 3 3 3 3 5 6 7 9 11 15 18 19 21 23 24 26 26 28 30 32 LCS_GDT G 42 G 42 3 4 21 3 3 3 3 5 5 7 9 9 11 15 19 21 23 24 26 26 28 30 32 LCS_GDT R 43 R 43 3 4 13 3 3 3 3 4 4 6 7 9 9 10 11 11 13 15 17 19 21 23 25 LCS_GDT S 44 S 44 3 4 13 3 3 3 3 4 5 7 9 9 9 11 11 11 13 15 17 17 19 23 24 LCS_GDT K 45 K 45 3 3 13 0 3 3 3 4 5 7 9 9 9 11 11 12 12 15 17 18 20 23 24 LCS_AVERAGE LCS_A: 20.99 ( 8.42 14.36 40.19 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 4 6 7 8 9 12 12 13 15 18 19 21 23 24 26 27 28 30 32 GDT PERCENT_AT 9.09 9.09 13.64 15.91 18.18 20.45 27.27 27.27 29.55 34.09 40.91 43.18 47.73 52.27 54.55 59.09 61.36 63.64 68.18 72.73 GDT RMS_LOCAL 0.26 0.26 1.04 1.35 1.73 1.95 2.37 2.37 3.19 3.70 4.04 4.22 4.64 4.89 5.13 5.39 5.86 6.02 6.33 6.64 GDT RMS_ALL_AT 18.51 18.51 26.57 15.39 14.73 14.87 16.32 16.32 15.66 13.72 14.25 13.90 14.48 14.23 13.81 13.54 11.67 11.71 11.88 11.98 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 27 E 27 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 12.421 0 0.021 0.024 14.774 0.000 0.000 - LGA V 3 V 3 10.675 0 0.038 1.038 13.397 0.000 0.000 7.320 LGA Q 4 Q 4 15.007 0 0.520 1.202 20.141 0.000 0.000 17.129 LGA G 5 G 5 16.034 0 0.435 0.435 18.221 0.000 0.000 - LGA P 6 P 6 18.681 0 0.611 0.502 21.471 0.000 0.000 21.471 LGA W 7 W 7 17.722 0 0.389 1.016 18.647 0.000 0.000 17.644 LGA V 8 V 8 18.692 0 0.647 0.672 20.123 0.000 0.000 19.423 LGA G 9 G 9 19.258 0 0.544 0.544 21.169 0.000 0.000 - LGA S 10 S 10 25.399 0 0.627 0.857 29.757 0.000 0.000 29.757 LGA S 11 S 11 28.397 0 0.133 0.691 29.879 0.000 0.000 28.568 LGA Y 12 Y 12 28.305 0 0.044 1.010 29.064 0.000 0.000 28.941 LGA V 13 V 13 27.841 0 0.563 0.533 28.674 0.000 0.000 28.088 LGA A 14 A 14 32.091 0 0.136 0.133 34.477 0.000 0.000 - LGA E 15 E 15 31.566 0 0.055 0.884 35.838 0.000 0.000 34.460 LGA T 16 T 16 24.640 0 0.349 0.281 27.164 0.000 0.000 23.089 LGA G 17 G 17 24.674 0 0.183 0.183 25.002 0.000 0.000 - LGA Q 18 Q 18 18.391 0 0.486 1.060 20.668 0.000 0.000 17.866 LGA N 19 N 19 17.282 0 0.058 1.112 23.128 0.000 0.000 20.440 LGA W 20 W 20 10.643 0 0.044 1.221 13.311 0.000 0.000 13.311 LGA A 21 A 21 7.487 0 0.636 0.594 9.405 0.455 0.364 - LGA S 22 S 22 1.635 0 0.592 0.562 5.438 36.818 26.364 5.438 LGA L 23 L 23 2.448 0 0.611 0.521 3.656 36.364 28.636 3.262 LGA A 24 A 24 3.138 0 0.603 0.568 6.189 11.818 9.818 - LGA A 25 A 25 6.936 0 0.580 0.586 8.084 0.000 0.000 - LGA N 26 N 26 11.763 0 0.612 0.682 16.021 0.000 0.000 16.021 LGA E 27 E 27 10.610 0 0.069 1.095 17.952 0.000 0.000 17.952 LGA L 28 L 28 7.552 0 0.645 0.742 9.063 0.000 0.000 6.561 LGA R 29 R 29 6.882 0 0.560 1.491 9.017 0.000 0.000 6.961 LGA V 30 V 30 2.567 0 0.061 0.080 4.688 30.909 22.597 4.308 LGA T 31 T 31 2.973 0 0.705 0.987 6.974 35.909 20.779 4.839 LGA E 32 E 32 3.186 0 0.174 1.440 9.808 16.818 7.475 9.808 LGA R 33 R 33 2.706 0 0.587 1.397 12.835 45.455 16.694 12.812 LGA P 34 P 34 3.157 0 0.149 0.154 6.212 40.455 23.377 6.212 LGA F 35 F 35 1.055 0 0.155 1.090 6.262 78.182 32.231 6.003 LGA W 36 W 36 1.920 0 0.243 0.998 11.864 54.545 18.182 11.864 LGA I 37 I 37 0.788 0 0.366 1.389 5.270 61.818 42.045 5.270 LGA S 38 S 38 0.848 0 0.648 0.830 3.703 48.182 40.303 3.596 LGA S 39 S 39 7.395 0 0.653 0.796 10.634 0.000 0.000 10.634 LGA F 40 F 40 9.464 0 0.601 0.803 13.864 0.000 0.000 13.459 LGA I 41 I 41 10.347 0 0.048 0.115 13.555 0.000 0.000 8.274 LGA G 42 G 42 14.896 0 0.682 0.682 18.982 0.000 0.000 - LGA R 43 R 43 21.186 0 0.124 1.254 32.320 0.000 0.000 32.172 LGA S 44 S 44 24.212 0 0.641 0.564 25.903 0.000 0.000 25.671 LGA K 45 K 45 22.901 0 0.041 0.806 24.274 0.000 0.000 21.192 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 10.712 10.572 11.865 11.312 6.565 1.039 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 12 2.37 27.841 24.672 0.485 LGA_LOCAL RMSD: 2.372 Number of atoms: 12 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 16.316 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 10.712 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.164664 * X + -0.768605 * Y + 0.618168 * Z + -21.912514 Y_new = -0.978786 * X + 0.049862 * Y + -0.198728 * Z + 47.784882 Z_new = 0.121920 * X + -0.637777 * Y + -0.760510 * Z + -29.519732 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.737469 -0.122224 -2.443744 [DEG: -99.5496 -7.0029 -140.0162 ] ZXZ: 1.259753 2.434895 2.952707 [DEG: 72.1785 139.5092 169.1777 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: S0953s2TS288_2-D1 REMARK 2: S0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap S0953s2TS288_2-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 12 2.37 24.672 10.71 REMARK ---------------------------------------------------------- MOLECULE S0953s2TS288_2-D1 PFRMAT TS TARGET S0953s2 MODEL 2 REFINED PARENT N/A ATOM 525 N ALA 2 6.577 30.406 4.571 1.00 0.94 ATOM 526 CA ALA 2 5.351 30.434 3.743 1.00 0.94 ATOM 527 C ALA 2 4.105 30.121 4.605 1.00 0.94 ATOM 528 O ALA 2 4.241 29.465 5.643 1.00 0.94 ATOM 529 CB ALA 2 5.443 29.411 2.599 1.00 1.03 ATOM 530 N VAL 3 2.897 30.538 4.196 1.00 0.74 ATOM 531 CA VAL 3 1.630 30.124 4.846 1.00 0.74 ATOM 532 C VAL 3 0.390 30.263 3.941 1.00 0.74 ATOM 533 O VAL 3 0.268 31.232 3.189 1.00 0.74 ATOM 534 CB VAL 3 1.422 30.889 6.180 1.00 0.67 ATOM 535 CG1 VAL 3 1.058 32.366 5.993 1.00 0.67 ATOM 536 CG2 VAL 3 0.349 30.240 7.063 1.00 0.67 ATOM 537 N GLN 4 -0.552 29.309 4.046 1.00 0.67 ATOM 538 CA GLN 4 -1.901 29.439 3.467 1.00 0.67 ATOM 539 C GLN 4 -2.866 29.938 4.565 1.00 0.67 ATOM 540 O GLN 4 -3.328 31.077 4.525 1.00 0.67 ATOM 541 CB GLN 4 -2.397 28.144 2.783 1.00 1.12 ATOM 542 CG GLN 4 -1.368 27.274 2.032 1.00 1.12 ATOM 543 CD GLN 4 -0.638 27.924 0.852 1.00 1.12 ATOM 544 OE1 GLN 4 -0.402 29.122 0.775 1.00 1.12 ATOM 545 NE2 GLN 4 -0.214 27.138 -0.116 1.00 1.12 ATOM 546 N GLY 5 -3.099 29.100 5.590 1.00 1.07 ATOM 547 CA GLY 5 -3.774 29.428 6.858 1.00 1.07 ATOM 548 C GLY 5 -5.105 30.192 6.749 1.00 1.07 ATOM 549 O GLY 5 -5.127 31.381 7.079 1.00 1.07 ATOM 550 N PRO 6 -6.217 29.552 6.331 1.00 0.54 ATOM 551 CA PRO 6 -7.525 30.204 6.225 1.00 0.54 ATOM 552 C PRO 6 -8.025 30.734 7.584 1.00 0.54 ATOM 553 O PRO 6 -8.244 29.968 8.527 1.00 0.54 ATOM 554 CB PRO 6 -8.469 29.148 5.634 1.00 0.44 ATOM 555 CG PRO 6 -7.822 27.822 6.033 1.00 0.44 ATOM 556 CD PRO 6 -6.329 28.144 5.971 1.00 0.44 ATOM 557 N TRP 7 -8.218 32.051 7.684 1.00 0.57 ATOM 558 CA TRP 7 -8.767 32.726 8.869 1.00 0.57 ATOM 559 C TRP 7 -10.291 32.571 8.977 1.00 0.57 ATOM 560 O TRP 7 -10.990 32.486 7.965 1.00 0.57 ATOM 561 CB TRP 7 -8.379 34.212 8.839 1.00 0.72 ATOM 562 CG TRP 7 -6.932 34.553 9.060 1.00 0.72 ATOM 563 CD1 TRP 7 -5.948 33.708 9.451 1.00 0.72 ATOM 564 CD2 TRP 7 -6.291 35.858 8.921 1.00 0.72 ATOM 565 NE1 TRP 7 -4.759 34.400 9.581 1.00 0.72 ATOM 566 CE2 TRP 7 -4.921 35.740 9.306 1.00 0.72 ATOM 567 CE3 TRP 7 -6.730 37.132 8.502 1.00 0.72 ATOM 568 CZ2 TRP 7 -4.047 36.837 9.336 1.00 0.72 ATOM 569 CZ3 TRP 7 -5.847 38.228 8.483 1.00 0.72 ATOM 570 CH2 TRP 7 -4.518 38.094 8.924 1.00 0.72 ATOM 571 N VAL 8 -10.817 32.589 10.207 1.00 0.74 ATOM 572 CA VAL 8 -12.259 32.482 10.504 1.00 0.74 ATOM 573 C VAL 8 -12.681 33.517 11.557 1.00 0.74 ATOM 574 O VAL 8 -11.967 33.740 12.539 1.00 0.74 ATOM 575 CB VAL 8 -12.651 31.050 10.946 1.00 0.73 ATOM 576 CG1 VAL 8 -14.170 30.907 11.133 1.00 0.73 ATOM 577 CG2 VAL 8 -12.218 29.973 9.942 1.00 0.73 ATOM 578 N GLY 9 -13.857 34.123 11.374 1.00 0.75 ATOM 579 CA GLY 9 -14.520 34.977 12.369 1.00 0.75 ATOM 580 C GLY 9 -16.023 35.103 12.088 1.00 0.75 ATOM 581 O GLY 9 -16.417 35.315 10.942 1.00 0.75 ATOM 582 N SER 10 -16.868 34.947 13.113 1.00 0.90 ATOM 583 CA SER 10 -18.335 34.937 12.960 1.00 0.90 ATOM 584 C SER 10 -18.892 36.285 12.484 1.00 0.90 ATOM 585 O SER 10 -18.628 37.326 13.089 1.00 0.90 ATOM 586 CB SER 10 -19.016 34.539 14.275 1.00 0.83 ATOM 587 OG SER 10 -20.432 34.584 14.137 1.00 0.83 ATOM 588 N SER 11 -19.714 36.254 11.429 1.00 1.21 ATOM 589 CA SER 11 -20.460 37.420 10.926 1.00 1.21 ATOM 590 C SER 11 -21.709 37.748 11.764 1.00 1.21 ATOM 591 O SER 11 -22.218 38.870 11.701 1.00 1.21 ATOM 592 CB SER 11 -20.910 37.172 9.479 1.00 1.59 ATOM 593 OG SER 11 -19.829 36.747 8.657 1.00 1.59 ATOM 594 N TYR 12 -22.237 36.769 12.514 1.00 1.14 ATOM 595 CA TYR 12 -23.536 36.862 13.198 1.00 1.14 ATOM 596 C TYR 12 -23.434 37.350 14.655 1.00 1.14 ATOM 597 O TYR 12 -24.275 38.130 15.108 1.00 1.14 ATOM 598 CB TYR 12 -24.216 35.485 13.119 1.00 1.36 ATOM 599 CG TYR 12 -25.633 35.447 13.664 1.00 1.36 ATOM 600 CD1 TYR 12 -26.714 35.809 12.834 1.00 1.36 ATOM 601 CD2 TYR 12 -25.876 35.042 14.993 1.00 1.36 ATOM 602 CE1 TYR 12 -28.033 35.763 13.326 1.00 1.36 ATOM 603 CE2 TYR 12 -27.194 35.001 15.489 1.00 1.36 ATOM 604 CZ TYR 12 -28.277 35.355 14.657 1.00 1.36 ATOM 605 OH TYR 12 -29.549 35.294 15.142 1.00 1.36 ATOM 606 N VAL 13 -22.417 36.895 15.398 1.00 1.27 ATOM 607 CA VAL 13 -22.287 37.130 16.850 1.00 1.27 ATOM 608 C VAL 13 -21.545 38.444 17.134 1.00 1.27 ATOM 609 O VAL 13 -20.312 38.488 17.168 1.00 1.27 ATOM 610 CB VAL 13 -21.644 35.911 17.549 1.00 1.56 ATOM 611 CG1 VAL 13 -21.515 36.118 19.065 1.00 1.56 ATOM 612 CG2 VAL 13 -22.493 34.648 17.340 1.00 1.56 ATOM 613 N ALA 14 -22.307 39.523 17.337 1.00 1.03 ATOM 614 CA ALA 14 -21.787 40.867 17.625 1.00 1.03 ATOM 615 C ALA 14 -21.495 41.131 19.123 1.00 1.03 ATOM 616 O ALA 14 -20.773 42.074 19.452 1.00 1.03 ATOM 617 CB ALA 14 -22.797 41.880 17.068 1.00 1.15 ATOM 618 N GLU 15 -22.046 40.321 20.038 1.00 1.33 ATOM 619 CA GLU 15 -21.940 40.518 21.496 1.00 1.33 ATOM 620 C GLU 15 -20.499 40.344 22.020 1.00 1.33 ATOM 621 O GLU 15 -19.990 41.182 22.767 1.00 1.33 ATOM 622 CB GLU 15 -22.913 39.545 22.188 1.00 1.53 ATOM 623 CG GLU 15 -22.897 39.649 23.723 1.00 1.53 ATOM 624 CD GLU 15 -24.009 38.829 24.413 1.00 1.53 ATOM 625 OE1 GLU 15 -24.700 38.005 23.762 1.00 1.53 ATOM 626 OE2 GLU 15 -24.200 39.000 25.643 1.00 1.53 ATOM 627 N THR 16 -19.831 39.270 21.592 1.00 1.32 ATOM 628 CA THR 16 -18.441 38.901 21.928 1.00 1.32 ATOM 629 C THR 16 -17.502 39.226 20.755 1.00 1.32 ATOM 630 O THR 16 -16.732 38.385 20.292 1.00 1.32 ATOM 631 CB THR 16 -18.379 37.424 22.367 1.00 1.25 ATOM 632 OG1 THR 16 -18.988 36.581 21.402 1.00 1.25 ATOM 633 CG2 THR 16 -19.101 37.210 23.701 1.00 1.25 ATOM 634 N GLY 17 -17.576 40.471 20.265 1.00 1.05 ATOM 635 CA GLY 17 -16.997 40.982 19.008 1.00 1.05 ATOM 636 C GLY 17 -15.563 40.576 18.621 1.00 1.05 ATOM 637 O GLY 17 -15.272 40.472 17.430 1.00 1.05 ATOM 638 N GLN 18 -14.678 40.275 19.579 1.00 1.38 ATOM 639 CA GLN 18 -13.320 39.744 19.339 1.00 1.38 ATOM 640 C GLN 18 -13.298 38.244 18.935 1.00 1.38 ATOM 641 O GLN 18 -12.427 37.481 19.365 1.00 1.38 ATOM 642 CB GLN 18 -12.418 40.046 20.552 1.00 1.55 ATOM 643 CG GLN 18 -12.321 41.548 20.871 1.00 1.55 ATOM 644 CD GLN 18 -11.151 41.853 21.807 1.00 1.55 ATOM 645 OE1 GLN 18 -11.017 41.298 22.892 1.00 1.55 ATOM 646 NE2 GLN 18 -10.257 42.744 21.435 1.00 1.55 ATOM 647 N ASN 19 -14.260 37.797 18.116 1.00 1.35 ATOM 648 CA ASN 19 -14.386 36.406 17.652 1.00 1.35 ATOM 649 C ASN 19 -13.302 35.978 16.638 1.00 1.35 ATOM 650 O ASN 19 -13.036 34.781 16.505 1.00 1.35 ATOM 651 CB ASN 19 -15.805 36.193 17.078 1.00 1.66 ATOM 652 CG ASN 19 -16.845 35.942 18.164 1.00 1.66 ATOM 653 OD1 ASN 19 -16.672 35.095 19.032 1.00 1.66 ATOM 654 ND2 ASN 19 -17.969 36.620 18.146 1.00 1.66 ATOM 655 N TRP 20 -12.673 36.919 15.923 1.00 1.16 ATOM 656 CA TRP 20 -11.557 36.632 15.009 1.00 1.16 ATOM 657 C TRP 20 -10.210 36.472 15.736 1.00 1.16 ATOM 658 O TRP 20 -9.868 37.250 16.633 1.00 1.16 ATOM 659 CB TRP 20 -11.460 37.711 13.921 1.00 1.17 ATOM 660 CG TRP 20 -10.195 37.679 13.111 1.00 1.17 ATOM 661 CD1 TRP 20 -9.915 36.804 12.115 1.00 1.17 ATOM 662 CD2 TRP 20 -9.001 38.515 13.254 1.00 1.17 ATOM 663 NE1 TRP 20 -8.641 37.045 11.631 1.00 1.17 ATOM 664 CE2 TRP 20 -8.041 38.102 12.280 1.00 1.17 ATOM 665 CE3 TRP 20 -8.643 39.601 14.086 1.00 1.17 ATOM 666 CZ2 TRP 20 -6.800 38.737 12.129 1.00 1.17 ATOM 667 CZ3 TRP 20 -7.411 40.265 13.922 1.00 1.17 ATOM 668 CH2 TRP 20 -6.492 39.838 12.944 1.00 1.17 ATOM 669 N ALA 21 -9.430 35.482 15.293 1.00 1.02 ATOM 670 CA ALA 21 -8.027 35.267 15.645 1.00 1.02 ATOM 671 C ALA 21 -7.328 34.444 14.545 1.00 1.02 ATOM 672 O ALA 21 -7.897 33.482 14.017 1.00 1.02 ATOM 673 CB ALA 21 -7.923 34.564 17.005 1.00 1.03 ATOM 674 N SER 22 -6.089 34.803 14.212 1.00 0.78 ATOM 675 CA SER 22 -5.227 34.041 13.300 1.00 0.78 ATOM 676 C SER 22 -4.615 32.791 13.960 1.00 0.78 ATOM 677 O SER 22 -4.472 32.715 15.187 1.00 0.78 ATOM 678 CB SER 22 -4.101 34.953 12.790 1.00 0.82 ATOM 679 OG SER 22 -3.316 35.450 13.864 1.00 0.82 ATOM 680 N LEU 23 -4.250 31.796 13.140 1.00 0.71 ATOM 681 CA LEU 23 -3.389 30.675 13.555 1.00 0.71 ATOM 682 C LEU 23 -1.905 31.093 13.456 1.00 0.71 ATOM 683 O LEU 23 -1.588 32.202 13.015 1.00 0.71 ATOM 684 CB LEU 23 -3.685 29.425 12.694 1.00 0.91 ATOM 685 CG LEU 23 -5.040 28.735 12.949 1.00 0.91 ATOM 686 CD1 LEU 23 -5.100 27.447 12.124 1.00 0.91 ATOM 687 CD2 LEU 23 -5.243 28.350 14.418 1.00 0.91 ATOM 688 N ALA 24 -0.982 30.204 13.842 1.00 0.68 ATOM 689 CA ALA 24 0.457 30.416 13.668 1.00 0.68 ATOM 690 C ALA 24 0.811 30.684 12.186 1.00 0.68 ATOM 691 O ALA 24 0.521 29.869 11.304 1.00 0.68 ATOM 692 CB ALA 24 1.212 29.205 14.227 1.00 0.81 ATOM 693 N ALA 25 1.428 31.839 11.925 1.00 0.71 ATOM 694 CA ALA 25 1.729 32.357 10.589 1.00 0.71 ATOM 695 C ALA 25 2.970 33.275 10.604 1.00 0.71 ATOM 696 O ALA 25 3.319 33.858 11.634 1.00 0.71 ATOM 697 CB ALA 25 0.488 33.094 10.068 1.00 0.59 ATOM 698 N ASN 26 3.641 33.406 9.454 1.00 0.87 ATOM 699 CA ASN 26 4.883 34.176 9.319 1.00 0.87 ATOM 700 C ASN 26 4.600 35.670 9.080 1.00 0.87 ATOM 701 O ASN 26 3.882 36.024 8.149 1.00 0.87 ATOM 702 CB ASN 26 5.745 33.559 8.201 1.00 0.83 ATOM 703 CG ASN 26 6.285 32.190 8.587 1.00 0.83 ATOM 704 OD1 ASN 26 7.305 32.068 9.249 1.00 0.83 ATOM 705 ND2 ASN 26 5.634 31.114 8.200 1.00 0.83 ATOM 706 N GLU 27 5.183 36.539 9.916 1.00 0.68 ATOM 707 CA GLU 27 5.154 38.019 9.858 1.00 0.68 ATOM 708 C GLU 27 3.773 38.716 9.965 1.00 0.68 ATOM 709 O GLU 27 3.730 39.903 10.300 1.00 0.68 ATOM 710 CB GLU 27 5.969 38.528 8.655 1.00 0.52 ATOM 711 CG GLU 27 7.439 38.087 8.717 1.00 0.52 ATOM 712 CD GLU 27 8.303 38.815 7.668 1.00 0.52 ATOM 713 OE1 GLU 27 7.949 38.801 6.464 1.00 0.52 ATOM 714 OE2 GLU 27 9.352 39.390 8.050 1.00 0.52 ATOM 715 N LEU 28 2.654 38.002 9.778 1.00 0.77 ATOM 716 CA LEU 28 1.292 38.534 9.956 1.00 0.77 ATOM 717 C LEU 28 1.043 38.961 11.422 1.00 0.77 ATOM 718 O LEU 28 1.667 38.420 12.343 1.00 0.77 ATOM 719 CB LEU 28 0.206 37.527 9.501 1.00 0.76 ATOM 720 CG LEU 28 0.514 36.584 8.318 1.00 0.76 ATOM 721 CD1 LEU 28 -0.727 35.746 7.999 1.00 0.76 ATOM 722 CD2 LEU 28 0.937 37.274 7.022 1.00 0.76 ATOM 723 N ARG 29 0.122 39.908 11.658 1.00 1.20 ATOM 724 CA ARG 29 -0.175 40.467 12.999 1.00 1.20 ATOM 725 C ARG 29 -1.670 40.694 13.272 1.00 1.20 ATOM 726 O ARG 29 -2.495 40.747 12.358 1.00 1.20 ATOM 727 CB ARG 29 0.631 41.769 13.211 1.00 1.52 ATOM 728 CG ARG 29 2.156 41.591 13.326 1.00 1.52 ATOM 729 CD ARG 29 2.574 40.772 14.555 1.00 1.52 ATOM 730 NE ARG 29 4.041 40.631 14.634 1.00 1.52 ATOM 731 CZ ARG 29 4.774 39.614 14.212 1.00 1.52 ATOM 732 NH1 ARG 29 6.055 39.594 14.451 1.00 1.52 ATOM 733 NH2 ARG 29 4.267 38.604 13.559 1.00 1.52 ATOM 734 N VAL 30 -1.987 40.830 14.563 1.00 1.02 ATOM 735 CA VAL 30 -3.336 40.978 15.137 1.00 1.02 ATOM 736 C VAL 30 -3.458 42.318 15.874 1.00 1.02 ATOM 737 O VAL 30 -2.643 42.625 16.749 1.00 1.02 ATOM 738 CB VAL 30 -3.647 39.792 16.079 1.00 1.11 ATOM 739 CG1 VAL 30 -4.963 39.944 16.854 1.00 1.11 ATOM 740 CG2 VAL 30 -3.718 38.477 15.294 1.00 1.11 ATOM 741 N THR 31 -4.505 43.080 15.548 1.00 0.85 ATOM 742 CA THR 31 -4.817 44.416 16.092 1.00 0.85 ATOM 743 C THR 31 -6.338 44.555 16.234 1.00 0.85 ATOM 744 O THR 31 -7.088 43.945 15.470 1.00 0.85 ATOM 745 CB THR 31 -4.231 45.516 15.176 1.00 0.88 ATOM 746 OG1 THR 31 -2.829 45.361 15.094 1.00 0.88 ATOM 747 CG2 THR 31 -4.464 46.951 15.657 1.00 0.88 ATOM 748 N GLU 32 -6.827 45.327 17.211 1.00 0.86 ATOM 749 CA GLU 32 -8.272 45.527 17.416 1.00 0.86 ATOM 750 C GLU 32 -8.901 46.275 16.221 1.00 0.86 ATOM 751 O GLU 32 -8.746 47.492 16.095 1.00 0.86 ATOM 752 CB GLU 32 -8.517 46.229 18.766 1.00 1.62 ATOM 753 CG GLU 32 -9.987 46.571 19.080 1.00 1.62 ATOM 754 CD GLU 32 -10.978 45.398 18.918 1.00 1.62 ATOM 755 OE1 GLU 32 -10.583 44.219 19.085 1.00 1.62 ATOM 756 OE2 GLU 32 -12.175 45.658 18.645 1.00 1.62 ATOM 757 N ARG 33 -9.627 45.517 15.380 1.00 0.93 ATOM 758 CA ARG 33 -10.176 45.816 14.036 1.00 0.93 ATOM 759 C ARG 33 -9.202 45.599 12.847 1.00 0.93 ATOM 760 O ARG 33 -9.532 44.735 12.034 1.00 0.93 ATOM 761 CB ARG 33 -11.038 47.097 13.973 1.00 1.54 ATOM 762 CG ARG 33 -12.236 47.046 14.938 1.00 1.54 ATOM 763 CD ARG 33 -13.088 48.323 14.889 1.00 1.54 ATOM 764 NE ARG 33 -13.836 48.470 13.619 1.00 1.54 ATOM 765 CZ ARG 33 -14.986 47.900 13.298 1.00 1.54 ATOM 766 NH1 ARG 33 -15.571 48.190 12.171 1.00 1.54 ATOM 767 NH2 ARG 33 -15.582 47.043 14.079 1.00 1.54 ATOM 768 N PRO 34 -8.039 46.269 12.685 1.00 0.69 ATOM 769 CA PRO 34 -7.146 46.024 11.545 1.00 0.69 ATOM 770 C PRO 34 -6.575 44.600 11.440 1.00 0.69 ATOM 771 O PRO 34 -6.052 44.033 12.403 1.00 0.69 ATOM 772 CB PRO 34 -6.022 47.054 11.647 1.00 0.87 ATOM 773 CG PRO 34 -6.688 48.209 12.383 1.00 0.87 ATOM 774 CD PRO 34 -7.612 47.482 13.357 1.00 0.87 ATOM 775 N PHE 35 -6.627 44.052 10.226 1.00 0.53 ATOM 776 CA PHE 35 -6.029 42.782 9.813 1.00 0.53 ATOM 777 C PHE 35 -4.725 43.080 9.046 1.00 0.53 ATOM 778 O PHE 35 -4.754 43.708 7.984 1.00 0.53 ATOM 779 CB PHE 35 -7.023 42.013 8.919 1.00 0.60 ATOM 780 CG PHE 35 -8.229 41.324 9.563 1.00 0.60 ATOM 781 CD1 PHE 35 -8.784 41.745 10.791 1.00 0.60 ATOM 782 CD2 PHE 35 -8.837 40.248 8.882 1.00 0.60 ATOM 783 CE1 PHE 35 -9.933 41.123 11.311 1.00 0.60 ATOM 784 CE2 PHE 35 -9.972 39.608 9.412 1.00 0.60 ATOM 785 CZ PHE 35 -10.525 40.050 10.625 1.00 0.60 ATOM 786 N TRP 36 -3.573 42.648 9.572 1.00 0.70 ATOM 787 CA TRP 36 -2.245 43.008 9.044 1.00 0.70 ATOM 788 C TRP 36 -1.503 41.799 8.455 1.00 0.70 ATOM 789 O TRP 36 -0.681 41.169 9.122 1.00 0.70 ATOM 790 CB TRP 36 -1.427 43.712 10.143 1.00 1.05 ATOM 791 CG TRP 36 -1.861 45.084 10.580 1.00 1.05 ATOM 792 CD1 TRP 36 -2.772 45.882 9.974 1.00 1.05 ATOM 793 CD2 TRP 36 -1.355 45.862 11.712 1.00 1.05 ATOM 794 NE1 TRP 36 -2.851 47.090 10.636 1.00 1.05 ATOM 795 CE2 TRP 36 -2.035 47.118 11.745 1.00 1.05 ATOM 796 CE3 TRP 36 -0.389 45.634 12.717 1.00 1.05 ATOM 797 CZ2 TRP 36 -1.800 48.075 12.743 1.00 1.05 ATOM 798 CZ3 TRP 36 -0.131 46.595 13.714 1.00 1.05 ATOM 799 CH2 TRP 36 -0.841 47.810 13.734 1.00 1.05 ATOM 800 N ILE 37 -1.733 41.508 7.168 1.00 0.54 ATOM 801 CA ILE 37 -0.956 40.517 6.393 1.00 0.54 ATOM 802 C ILE 37 0.400 41.069 5.902 1.00 0.54 ATOM 803 O ILE 37 0.751 40.967 4.725 1.00 0.54 ATOM 804 CB ILE 37 -1.793 39.854 5.271 1.00 0.51 ATOM 805 CG1 ILE 37 -2.407 40.864 4.274 1.00 0.51 ATOM 806 CG2 ILE 37 -2.866 38.948 5.896 1.00 0.51 ATOM 807 CD1 ILE 37 -2.826 40.210 2.949 1.00 0.51 ATOM 808 N SER 38 1.176 41.686 6.800 1.00 0.42 ATOM 809 CA SER 38 2.556 42.093 6.501 1.00 0.42 ATOM 810 C SER 38 3.431 40.853 6.254 1.00 0.42 ATOM 811 O SER 38 3.481 39.955 7.095 1.00 0.42 ATOM 812 CB SER 38 3.134 42.944 7.636 1.00 0.73 ATOM 813 OG SER 38 4.434 43.383 7.278 1.00 0.73 ATOM 814 N SER 39 4.086 40.776 5.091 1.00 0.66 ATOM 815 CA SER 39 4.958 39.655 4.715 1.00 0.66 ATOM 816 C SER 39 5.941 40.051 3.612 1.00 0.66 ATOM 817 O SER 39 5.557 40.680 2.620 1.00 0.66 ATOM 818 CB SER 39 4.126 38.450 4.257 1.00 0.54 ATOM 819 OG SER 39 4.988 37.379 3.904 1.00 0.54 ATOM 820 N PHE 40 7.210 39.680 3.781 1.00 0.73 ATOM 821 CA PHE 40 8.311 39.972 2.862 1.00 0.73 ATOM 822 C PHE 40 8.753 38.683 2.137 1.00 0.73 ATOM 823 O PHE 40 9.350 37.777 2.725 1.00 0.73 ATOM 824 CB PHE 40 9.408 40.707 3.647 1.00 0.90 ATOM 825 CG PHE 40 9.011 42.141 3.988 1.00 0.90 ATOM 826 CD1 PHE 40 8.165 42.421 5.081 1.00 0.90 ATOM 827 CD2 PHE 40 9.407 43.195 3.142 1.00 0.90 ATOM 828 CE1 PHE 40 7.692 43.729 5.293 1.00 0.90 ATOM 829 CE2 PHE 40 8.918 44.498 3.338 1.00 0.90 ATOM 830 CZ PHE 40 8.055 44.763 4.413 1.00 0.90 ATOM 831 N ILE 41 8.413 38.600 0.842 1.00 0.67 ATOM 832 CA ILE 41 8.472 37.380 0.012 1.00 0.67 ATOM 833 C ILE 41 9.862 37.078 -0.593 1.00 0.67 ATOM 834 O ILE 41 10.582 37.976 -1.044 1.00 0.67 ATOM 835 CB ILE 41 7.336 37.446 -1.046 1.00 0.98 ATOM 836 CG1 ILE 41 5.959 37.401 -0.332 1.00 0.98 ATOM 837 CG2 ILE 41 7.423 36.330 -2.100 1.00 0.98 ATOM 838 CD1 ILE 41 4.754 37.666 -1.243 1.00 0.98 ATOM 839 N GLY 42 10.216 35.785 -0.631 1.00 0.63 ATOM 840 CA GLY 42 11.453 35.234 -1.213 1.00 0.63 ATOM 841 C GLY 42 11.384 34.919 -2.720 1.00 0.63 ATOM 842 O GLY 42 10.309 34.898 -3.323 1.00 0.63 ATOM 843 N ARG 43 12.543 34.638 -3.336 1.00 0.44 ATOM 844 CA ARG 43 12.677 34.335 -4.778 1.00 0.44 ATOM 845 C ARG 43 11.858 33.097 -5.186 1.00 0.44 ATOM 846 O ARG 43 12.036 32.020 -4.619 1.00 0.44 ATOM 847 CB ARG 43 14.174 34.181 -5.122 1.00 0.91 ATOM 848 CG ARG 43 14.423 33.872 -6.608 1.00 0.91 ATOM 849 CD ARG 43 15.920 33.834 -6.941 1.00 0.91 ATOM 850 NE ARG 43 16.133 33.425 -8.347 1.00 0.91 ATOM 851 CZ ARG 43 17.211 32.858 -8.863 1.00 0.91 ATOM 852 NH1 ARG 43 17.223 32.492 -10.114 1.00 0.91 ATOM 853 NH2 ARG 43 18.292 32.641 -8.165 1.00 0.91 ATOM 854 N SER 44 10.991 33.259 -6.192 1.00 0.77 ATOM 855 CA SER 44 10.161 32.207 -6.823 1.00 0.77 ATOM 856 C SER 44 9.147 31.482 -5.909 1.00 0.77 ATOM 857 O SER 44 8.610 30.442 -6.301 1.00 0.77 ATOM 858 CB SER 44 11.038 31.201 -7.592 1.00 1.21 ATOM 859 OG SER 44 11.934 31.861 -8.480 1.00 1.21 ATOM 860 N LYS 45 8.867 32.003 -4.704 1.00 0.78 ATOM 861 CA LYS 45 7.966 31.384 -3.706 1.00 0.78 ATOM 862 C LYS 45 6.540 31.956 -3.759 1.00 0.78 ATOM 863 O LYS 45 6.335 33.118 -4.110 1.00 0.78 ATOM 864 CB LYS 45 8.596 31.493 -2.304 1.00 1.08 ATOM 865 CG LYS 45 9.817 30.563 -2.181 1.00 1.08 ATOM 866 CD LYS 45 10.613 30.799 -0.891 1.00 1.08 ATOM 867 CE LYS 45 11.846 29.882 -0.876 1.00 1.08 ATOM 868 NZ LYS 45 12.731 30.154 0.291 1.00 1.08 TER END