####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name S0953s2TS208_4-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name S0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap S0953s2TS208_4-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 20 22 - 41 4.85 15.71 LCS_AVERAGE: 38.64 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 13 - 20 1.83 25.48 LCS_AVERAGE: 13.33 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 5 2 - 6 0.80 16.21 LONGEST_CONTINUOUS_SEGMENT: 5 13 - 17 0.68 27.92 LONGEST_CONTINUOUS_SEGMENT: 5 34 - 38 0.92 17.48 LCS_AVERAGE: 8.94 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 5 6 8 3 4 6 6 6 9 10 12 13 15 17 19 20 23 24 25 26 29 31 32 LCS_GDT V 3 V 3 5 6 8 3 4 5 6 7 9 10 12 13 15 17 19 20 23 24 25 26 29 31 32 LCS_GDT Q 4 Q 4 5 6 8 3 4 5 6 7 9 10 12 13 14 17 19 20 23 24 25 26 29 31 32 LCS_GDT G 5 G 5 5 6 10 0 4 5 6 6 7 8 10 11 12 15 17 19 23 23 25 26 29 31 32 LCS_GDT P 6 P 6 5 6 16 1 4 5 6 6 7 7 7 10 11 12 15 19 23 23 24 26 29 31 32 LCS_GDT W 7 W 7 3 6 16 0 3 4 4 4 7 7 7 8 11 12 14 19 23 23 25 26 29 31 32 LCS_GDT V 8 V 8 3 4 16 3 3 4 4 4 7 7 9 10 11 13 14 19 23 23 25 26 29 31 32 LCS_GDT G 9 G 9 3 4 16 3 3 4 4 6 8 9 10 11 13 14 14 19 23 23 25 26 29 31 32 LCS_GDT S 10 S 10 4 5 16 3 3 4 5 5 7 8 10 11 13 14 14 16 18 19 21 25 26 29 31 LCS_GDT S 11 S 11 4 5 16 3 3 4 5 6 8 9 10 11 13 14 14 15 16 17 18 21 22 24 26 LCS_GDT Y 12 Y 12 4 5 16 3 3 4 5 5 5 7 10 11 13 14 14 14 15 17 18 20 21 22 23 LCS_GDT V 13 V 13 5 8 16 3 5 5 5 6 8 8 10 11 13 14 14 15 16 17 19 21 22 24 26 LCS_GDT A 14 A 14 5 8 16 3 5 6 6 6 8 9 10 11 13 14 14 15 15 17 18 20 22 22 24 LCS_GDT E 15 E 15 5 8 16 3 5 6 6 6 8 9 10 11 13 14 14 15 15 17 18 20 21 22 23 LCS_GDT T 16 T 16 5 8 16 3 5 6 6 6 8 9 10 11 13 14 14 15 16 17 19 21 22 24 26 LCS_GDT G 17 G 17 5 8 16 3 5 6 6 6 8 9 10 11 13 14 14 15 16 19 19 22 23 24 26 LCS_GDT Q 18 Q 18 3 8 16 3 4 6 6 6 8 9 10 11 13 14 14 16 18 19 22 25 26 29 30 LCS_GDT N 19 N 19 4 8 16 4 4 4 6 6 8 9 10 11 13 14 15 19 23 23 25 26 29 31 32 LCS_GDT W 20 W 20 4 8 17 4 4 6 6 6 8 9 11 12 14 17 19 20 23 24 25 26 29 31 32 LCS_GDT A 21 A 21 4 5 19 4 4 4 5 6 9 10 12 13 14 17 19 20 23 24 25 26 29 31 32 LCS_GDT S 22 S 22 4 5 20 4 4 4 5 7 9 10 12 13 15 17 19 20 23 24 25 26 29 31 32 LCS_GDT L 23 L 23 3 3 20 3 3 4 4 4 7 8 9 11 15 17 19 20 22 24 25 26 29 31 32 LCS_GDT A 24 A 24 3 4 20 3 3 3 5 7 9 10 12 13 15 17 19 20 23 24 25 26 29 31 32 LCS_GDT A 25 A 25 3 5 20 0 3 4 4 4 5 8 8 10 14 16 19 20 22 24 25 26 29 31 32 LCS_GDT N 26 N 26 3 5 20 3 3 4 4 4 5 5 6 10 12 15 17 20 22 24 25 26 29 31 32 LCS_GDT E 27 E 27 3 5 20 3 3 4 6 6 6 8 9 11 13 14 17 20 22 24 25 26 29 31 32 LCS_GDT L 28 L 28 3 6 20 3 3 4 5 7 9 10 12 13 15 17 19 20 23 24 25 26 29 31 32 LCS_GDT R 29 R 29 4 6 20 3 4 4 5 7 9 10 12 13 15 17 19 20 23 24 25 26 29 31 32 LCS_GDT V 30 V 30 4 6 20 3 4 4 5 7 8 10 11 13 15 17 19 20 23 24 25 26 29 31 32 LCS_GDT T 31 T 31 4 6 20 3 4 4 5 7 9 10 12 13 15 17 19 20 23 24 25 26 29 31 32 LCS_GDT E 32 E 32 4 7 20 2 4 4 5 6 7 9 9 12 14 15 17 19 22 24 25 26 28 31 32 LCS_GDT R 33 R 33 3 7 20 2 3 5 5 7 9 10 12 13 15 17 19 20 23 24 25 26 29 31 32 LCS_GDT P 34 P 34 5 7 20 3 4 6 6 7 8 10 12 13 15 17 19 20 23 24 25 26 29 31 32 LCS_GDT F 35 F 35 5 7 20 3 4 6 6 7 8 10 12 13 15 17 19 20 23 24 25 26 29 31 32 LCS_GDT W 36 W 36 5 7 20 3 4 6 6 7 8 9 10 11 15 17 19 20 23 24 25 26 29 31 32 LCS_GDT I 37 I 37 5 7 20 3 4 6 6 7 8 9 10 11 15 17 19 20 23 24 25 26 29 31 32 LCS_GDT S 38 S 38 5 7 20 3 4 6 6 7 8 9 10 11 14 16 18 20 22 24 25 26 29 31 32 LCS_GDT S 39 S 39 3 6 20 3 3 3 4 5 7 8 9 11 15 17 19 20 23 24 25 26 29 31 32 LCS_GDT F 40 F 40 3 5 20 3 3 3 4 5 7 8 9 10 12 16 18 20 22 24 25 26 29 31 32 LCS_GDT I 41 I 41 3 4 20 3 3 3 4 4 6 8 9 10 13 15 18 20 22 24 25 26 29 31 32 LCS_GDT G 42 G 42 3 4 15 3 3 3 4 5 7 8 9 10 11 15 18 20 22 24 25 26 29 31 32 LCS_GDT R 43 R 43 3 4 13 3 3 3 4 4 4 6 8 9 10 10 12 13 15 15 16 20 21 23 25 LCS_GDT S 44 S 44 3 4 13 3 3 3 4 4 7 8 9 9 10 11 12 13 15 15 16 20 21 23 24 LCS_GDT K 45 K 45 3 3 13 0 3 3 3 3 7 8 9 9 10 11 12 13 15 15 16 20 23 24 25 LCS_AVERAGE LCS_A: 20.30 ( 8.94 13.33 38.64 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 5 6 6 7 9 10 12 13 15 17 19 20 23 24 25 26 29 31 32 GDT PERCENT_AT 9.09 11.36 13.64 13.64 15.91 20.45 22.73 27.27 29.55 34.09 38.64 43.18 45.45 52.27 54.55 56.82 59.09 65.91 70.45 72.73 GDT RMS_LOCAL 0.27 0.68 0.91 0.91 1.51 2.48 2.47 3.02 3.13 3.92 4.17 4.40 4.53 5.51 5.15 5.28 5.44 6.37 6.57 6.70 GDT RMS_ALL_AT 19.92 27.92 17.50 17.50 15.89 13.34 13.89 12.87 12.87 13.70 13.03 12.84 13.01 11.50 13.36 13.45 13.56 12.21 12.23 12.00 # Checking swapping # possible swapping detected: E 15 E 15 # possible swapping detected: E 27 E 27 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 2.862 0 0.286 0.334 4.234 48.636 40.000 - LGA V 3 V 3 1.466 0 0.051 0.140 3.291 62.727 47.792 2.681 LGA Q 4 Q 4 2.544 0 0.221 1.002 7.853 25.000 15.556 3.677 LGA G 5 G 5 6.836 0 0.147 0.147 8.570 0.000 0.000 - LGA P 6 P 6 8.709 0 0.673 0.602 10.205 0.000 0.000 9.925 LGA W 7 W 7 10.556 0 0.316 1.202 16.561 0.000 0.000 15.160 LGA V 8 V 8 10.270 0 0.626 0.652 11.183 0.000 0.000 10.667 LGA G 9 G 9 12.187 0 0.557 0.557 14.503 0.000 0.000 - LGA S 10 S 10 17.389 0 0.605 0.645 20.948 0.000 0.000 18.139 LGA S 11 S 11 21.925 0 0.579 0.583 23.978 0.000 0.000 23.978 LGA Y 12 Y 12 23.650 0 0.057 1.236 25.469 0.000 0.000 18.426 LGA V 13 V 13 22.976 0 0.460 1.262 24.762 0.000 0.000 21.702 LGA A 14 A 14 28.686 0 0.109 0.106 30.763 0.000 0.000 - LGA E 15 E 15 29.996 0 0.086 1.717 32.268 0.000 0.000 32.268 LGA T 16 T 16 23.581 0 0.117 0.169 25.619 0.000 0.000 20.091 LGA G 17 G 17 22.885 0 0.422 0.422 23.062 0.000 0.000 - LGA Q 18 Q 18 16.087 0 0.436 0.483 18.882 0.000 0.000 15.959 LGA N 19 N 19 12.132 0 0.146 1.198 14.063 0.000 0.000 12.036 LGA W 20 W 20 6.190 0 0.178 0.242 13.913 2.727 0.779 13.384 LGA A 21 A 21 2.740 0 0.513 0.468 3.273 27.727 25.818 - LGA S 22 S 22 2.716 0 0.544 0.816 4.534 22.727 19.091 4.333 LGA L 23 L 23 5.320 0 0.635 1.452 12.043 5.455 2.727 9.694 LGA A 24 A 24 2.955 0 0.606 0.581 4.738 14.091 11.636 - LGA A 25 A 25 6.576 0 0.568 0.577 7.558 0.000 0.000 - LGA N 26 N 26 9.166 0 0.615 1.040 15.714 0.000 0.000 14.189 LGA E 27 E 27 7.028 0 0.079 1.023 12.311 0.000 0.000 12.311 LGA L 28 L 28 3.026 0 0.627 0.619 5.488 25.000 22.045 2.829 LGA R 29 R 29 3.432 0 0.574 1.437 5.198 12.273 7.769 4.903 LGA V 30 V 30 4.495 0 0.069 0.090 5.992 11.364 6.494 5.992 LGA T 31 T 31 4.125 0 0.669 0.630 4.845 4.545 5.195 4.845 LGA E 32 E 32 6.670 0 0.690 1.191 9.914 0.000 0.000 9.481 LGA R 33 R 33 2.335 0 0.558 1.193 13.138 46.364 17.355 13.138 LGA P 34 P 34 3.968 0 0.064 0.387 7.386 18.636 10.909 7.386 LGA F 35 F 35 3.089 0 0.095 0.982 6.563 9.091 16.198 4.806 LGA W 36 W 36 8.384 0 0.049 0.966 18.978 0.000 0.000 18.978 LGA I 37 I 37 9.070 0 0.272 1.399 13.308 0.000 0.000 13.308 LGA S 38 S 38 11.731 0 0.111 0.612 13.554 0.000 0.000 13.174 LGA S 39 S 39 8.543 0 0.675 0.799 10.061 0.000 0.000 10.061 LGA F 40 F 40 10.235 0 0.631 1.165 16.032 0.000 0.000 16.032 LGA I 41 I 41 9.163 0 0.017 0.052 9.782 0.000 0.000 8.442 LGA G 42 G 42 9.100 0 0.557 0.557 9.959 0.000 0.000 - LGA R 43 R 43 14.037 0 0.313 1.561 21.794 0.000 0.000 21.794 LGA S 44 S 44 15.435 0 0.685 0.588 16.838 0.000 0.000 15.310 LGA K 45 K 45 15.483 0 0.043 0.896 18.128 0.000 0.000 18.128 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 10.710 10.595 11.522 7.645 5.667 2.182 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 12 3.02 27.273 23.826 0.385 LGA_LOCAL RMSD: 3.016 Number of atoms: 12 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 12.875 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 10.710 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.775330 * X + 0.553851 * Y + -0.303499 * Z + 9.659990 Y_new = 0.615084 * X + 0.771240 * Y + -0.163893 * Z + 57.500927 Z_new = 0.143299 * X + -0.313748 * Y + -0.938631 * Z + -20.872572 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.470939 -0.143794 -2.819007 [DEG: 141.5744 -8.2388 -161.5172 ] ZXZ: -1.075655 2.789435 2.713156 [DEG: -61.6305 159.8228 155.4524 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: S0953s2TS208_4-D1 REMARK 2: S0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap S0953s2TS208_4-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 12 3.02 23.826 10.71 REMARK ---------------------------------------------------------- MOLECULE S0953s2TS208_4-D1 PFRMAT TS TARGET S0953s2 MODEL 4 REFINED PARENT N/A ATOM 525 N ALA 2 13.167 35.347 13.370 1.00 5.93 ATOM 526 CA ALA 2 13.113 36.183 12.164 1.00 5.93 ATOM 527 C ALA 2 11.785 35.920 11.428 1.00 5.93 ATOM 528 O ALA 2 11.694 35.036 10.570 1.00 5.93 ATOM 529 CB ALA 2 14.360 35.885 11.316 1.00 6.04 ATOM 530 N VAL 3 10.725 36.637 11.826 1.00 5.40 ATOM 531 CA VAL 3 9.352 36.410 11.334 1.00 5.40 ATOM 532 C VAL 3 9.259 36.652 9.822 1.00 5.40 ATOM 533 O VAL 3 9.596 37.724 9.324 1.00 5.40 ATOM 534 CB VAL 3 8.325 37.269 12.104 1.00 5.34 ATOM 535 CG1 VAL 3 6.908 37.185 11.516 1.00 5.34 ATOM 536 CG2 VAL 3 8.237 36.832 13.573 1.00 5.34 ATOM 537 N GLN 4 8.747 35.654 9.104 1.00 5.11 ATOM 538 CA GLN 4 8.421 35.692 7.678 1.00 5.11 ATOM 539 C GLN 4 7.110 34.912 7.515 1.00 5.11 ATOM 540 O GLN 4 7.117 33.681 7.427 1.00 5.11 ATOM 541 CB GLN 4 9.610 35.125 6.875 1.00 5.65 ATOM 542 CG GLN 4 9.331 34.977 5.368 1.00 5.65 ATOM 543 CD GLN 4 10.476 34.298 4.609 1.00 5.65 ATOM 544 OE1 GLN 4 11.624 34.242 5.038 1.00 5.65 ATOM 545 NE2 GLN 4 10.211 33.746 3.443 1.00 5.65 ATOM 546 N GLY 5 5.980 35.624 7.571 1.00 5.09 ATOM 547 CA GLY 5 4.650 35.017 7.688 1.00 5.09 ATOM 548 C GLY 5 3.599 35.582 6.721 1.00 5.09 ATOM 549 O GLY 5 3.523 36.804 6.567 1.00 5.09 ATOM 550 N PRO 6 2.787 34.724 6.072 1.00 4.91 ATOM 551 CA PRO 6 1.595 35.140 5.341 1.00 4.91 ATOM 552 C PRO 6 0.345 35.131 6.236 1.00 4.91 ATOM 553 O PRO 6 0.166 34.226 7.058 1.00 4.91 ATOM 554 CB PRO 6 1.427 34.155 4.172 1.00 5.16 ATOM 555 CG PRO 6 2.633 33.220 4.261 1.00 5.16 ATOM 556 CD PRO 6 3.088 33.347 5.711 1.00 5.16 ATOM 557 N TRP 7 -0.566 36.077 6.000 1.00 4.94 ATOM 558 CA TRP 7 -1.912 36.103 6.586 1.00 4.94 ATOM 559 C TRP 7 -2.974 36.392 5.517 1.00 4.94 ATOM 560 O TRP 7 -2.876 37.358 4.753 1.00 4.94 ATOM 561 CB TRP 7 -1.981 37.076 7.771 1.00 5.04 ATOM 562 CG TRP 7 -1.177 36.658 8.964 1.00 5.04 ATOM 563 CD1 TRP 7 -1.618 35.842 9.947 1.00 5.04 ATOM 564 CD2 TRP 7 0.217 36.959 9.291 1.00 5.04 ATOM 565 NE1 TRP 7 -0.603 35.617 10.857 1.00 5.04 ATOM 566 CE2 TRP 7 0.561 36.245 10.479 1.00 5.04 ATOM 567 CE3 TRP 7 1.227 37.760 8.715 1.00 5.04 ATOM 568 CZ2 TRP 7 1.849 36.271 11.033 1.00 5.04 ATOM 569 CZ3 TRP 7 2.514 37.822 9.284 1.00 5.04 ATOM 570 CH2 TRP 7 2.835 37.063 10.425 1.00 5.04 ATOM 571 N VAL 8 -3.990 35.523 5.465 1.00 5.07 ATOM 572 CA VAL 8 -5.065 35.530 4.459 1.00 5.07 ATOM 573 C VAL 8 -6.396 35.905 5.121 1.00 5.07 ATOM 574 O VAL 8 -6.901 35.172 5.975 1.00 5.07 ATOM 575 CB VAL 8 -5.160 34.171 3.724 1.00 5.30 ATOM 576 CG1 VAL 8 -6.189 34.206 2.588 1.00 5.30 ATOM 577 CG2 VAL 8 -3.813 33.733 3.129 1.00 5.30 ATOM 578 N GLY 9 -6.969 37.042 4.729 1.00 5.11 ATOM 579 CA GLY 9 -8.329 37.454 5.087 1.00 5.11 ATOM 580 C GLY 9 -9.322 36.994 4.017 1.00 5.11 ATOM 581 O GLY 9 -9.286 37.492 2.894 1.00 5.11 ATOM 582 N SER 10 -10.186 36.022 4.320 1.00 5.77 ATOM 583 CA SER 10 -11.098 35.434 3.323 1.00 5.77 ATOM 584 C SER 10 -12.124 36.460 2.811 1.00 5.77 ATOM 585 O SER 10 -12.988 36.922 3.561 1.00 5.77 ATOM 586 CB SER 10 -11.817 34.207 3.897 1.00 5.99 ATOM 587 OG SER 10 -10.884 33.241 4.362 1.00 5.99 ATOM 588 N SER 11 -12.031 36.818 1.524 1.00 5.50 ATOM 589 CA SER 11 -12.933 37.774 0.860 1.00 5.50 ATOM 590 C SER 11 -14.319 37.174 0.556 1.00 5.50 ATOM 591 O SER 11 -14.494 35.952 0.575 1.00 5.50 ATOM 592 CB SER 11 -12.268 38.307 -0.415 1.00 5.47 ATOM 593 OG SER 11 -12.951 39.461 -0.879 1.00 5.47 ATOM 594 N TYR 12 -15.304 38.031 0.264 1.00 6.17 ATOM 595 CA TYR 12 -16.712 37.739 -0.082 1.00 6.17 ATOM 596 C TYR 12 -17.584 37.076 1.007 1.00 6.17 ATOM 597 O TYR 12 -18.787 37.334 1.055 1.00 6.17 ATOM 598 CB TYR 12 -16.801 36.921 -1.384 1.00 6.37 ATOM 599 CG TYR 12 -15.901 37.372 -2.521 1.00 6.37 ATOM 600 CD1 TYR 12 -14.887 36.516 -2.998 1.00 6.37 ATOM 601 CD2 TYR 12 -16.084 38.641 -3.107 1.00 6.37 ATOM 602 CE1 TYR 12 -14.056 36.924 -4.059 1.00 6.37 ATOM 603 CE2 TYR 12 -15.250 39.055 -4.164 1.00 6.37 ATOM 604 CZ TYR 12 -14.235 38.198 -4.645 1.00 6.37 ATOM 605 OH TYR 12 -13.441 38.604 -5.675 1.00 6.37 ATOM 606 N VAL 13 -17.007 36.233 1.871 1.00 6.71 ATOM 607 CA VAL 13 -17.690 35.388 2.876 1.00 6.71 ATOM 608 C VAL 13 -18.183 36.161 4.118 1.00 6.71 ATOM 609 O VAL 13 -17.915 35.806 5.267 1.00 6.71 ATOM 610 CB VAL 13 -16.829 34.154 3.233 1.00 6.76 ATOM 611 CG1 VAL 13 -16.676 33.229 2.016 1.00 6.76 ATOM 612 CG2 VAL 13 -15.423 34.501 3.742 1.00 6.76 ATOM 613 N ALA 14 -18.914 37.256 3.897 1.00 6.76 ATOM 614 CA ALA 14 -19.409 38.158 4.937 1.00 6.76 ATOM 615 C ALA 14 -20.360 37.484 5.957 1.00 6.76 ATOM 616 O ALA 14 -20.510 37.979 7.076 1.00 6.76 ATOM 617 CB ALA 14 -20.091 39.341 4.239 1.00 6.75 ATOM 618 N GLU 15 -20.975 36.348 5.607 1.00 7.70 ATOM 619 CA GLU 15 -21.823 35.550 6.503 1.00 7.70 ATOM 620 C GLU 15 -21.042 34.842 7.634 1.00 7.70 ATOM 621 O GLU 15 -21.641 34.503 8.659 1.00 7.70 ATOM 622 CB GLU 15 -22.687 34.565 5.689 1.00 8.09 ATOM 623 CG GLU 15 -21.977 33.340 5.079 1.00 8.09 ATOM 624 CD GLU 15 -21.046 33.630 3.880 1.00 8.09 ATOM 625 OE1 GLU 15 -21.088 34.739 3.294 1.00 8.09 ATOM 626 OE2 GLU 15 -20.268 32.721 3.501 1.00 8.09 ATOM 627 N THR 16 -19.721 34.651 7.489 1.00 7.59 ATOM 628 CA THR 16 -18.821 34.193 8.572 1.00 7.59 ATOM 629 C THR 16 -17.930 35.327 9.097 1.00 7.59 ATOM 630 O THR 16 -17.681 35.397 10.303 1.00 7.59 ATOM 631 CB THR 16 -17.976 32.977 8.154 1.00 7.68 ATOM 632 OG1 THR 16 -17.162 33.273 7.039 1.00 7.68 ATOM 633 CG2 THR 16 -18.847 31.769 7.808 1.00 7.68 ATOM 634 N GLY 17 -17.505 36.260 8.234 1.00 6.83 ATOM 635 CA GLY 17 -16.852 37.523 8.608 1.00 6.83 ATOM 636 C GLY 17 -15.414 37.385 9.127 1.00 6.83 ATOM 637 O GLY 17 -14.456 37.569 8.376 1.00 6.83 ATOM 638 N GLN 18 -15.256 37.085 10.421 1.00 6.71 ATOM 639 CA GLN 18 -13.978 37.040 11.152 1.00 6.71 ATOM 640 C GLN 18 -13.179 35.740 10.889 1.00 6.71 ATOM 641 O GLN 18 -12.721 35.083 11.828 1.00 6.71 ATOM 642 CB GLN 18 -14.233 37.257 12.663 1.00 6.89 ATOM 643 CG GLN 18 -14.970 38.555 13.042 1.00 6.89 ATOM 644 CD GLN 18 -14.128 39.829 12.944 1.00 6.89 ATOM 645 OE1 GLN 18 -12.965 39.847 12.558 1.00 6.89 ATOM 646 NE2 GLN 18 -14.693 40.956 13.320 1.00 6.89 ATOM 647 N ASN 19 -13.032 35.329 9.622 1.00 6.66 ATOM 648 CA ASN 19 -12.405 34.051 9.253 1.00 6.66 ATOM 649 C ASN 19 -10.921 33.984 9.680 1.00 6.66 ATOM 650 O ASN 19 -10.573 33.110 10.476 1.00 6.66 ATOM 651 CB ASN 19 -12.615 33.791 7.748 1.00 6.89 ATOM 652 CG ASN 19 -12.152 32.398 7.323 1.00 6.89 ATOM 653 OD1 ASN 19 -11.022 31.984 7.547 1.00 6.89 ATOM 654 ND2 ASN 19 -13.011 31.615 6.709 1.00 6.89 ATOM 655 N TRP 20 -10.091 34.918 9.181 1.00 5.96 ATOM 656 CA TRP 20 -8.661 35.119 9.503 1.00 5.96 ATOM 657 C TRP 20 -7.799 33.833 9.547 1.00 5.96 ATOM 658 O TRP 20 -7.779 33.116 10.552 1.00 5.96 ATOM 659 CB TRP 20 -8.542 35.883 10.833 1.00 5.34 ATOM 660 CG TRP 20 -9.053 37.294 10.889 1.00 5.34 ATOM 661 CD1 TRP 20 -10.204 37.685 11.479 1.00 5.34 ATOM 662 CD2 TRP 20 -8.379 38.529 10.484 1.00 5.34 ATOM 663 NE1 TRP 20 -10.298 39.063 11.466 1.00 5.34 ATOM 664 CE2 TRP 20 -9.162 39.638 10.932 1.00 5.34 ATOM 665 CE3 TRP 20 -7.136 38.822 9.876 1.00 5.34 ATOM 666 CZ2 TRP 20 -8.714 40.963 10.826 1.00 5.34 ATOM 667 CZ3 TRP 20 -6.679 40.150 9.764 1.00 5.34 ATOM 668 CH2 TRP 20 -7.454 41.216 10.256 1.00 5.34 ATOM 669 N ALA 21 -6.989 33.576 8.510 1.00 6.05 ATOM 670 CA ALA 21 -5.970 32.511 8.521 1.00 6.05 ATOM 671 C ALA 21 -4.783 32.871 9.452 1.00 6.05 ATOM 672 O ALA 21 -3.710 33.285 9.005 1.00 6.05 ATOM 673 CB ALA 21 -5.542 32.212 7.078 1.00 5.99 ATOM 674 N SER 22 -5.010 32.775 10.764 1.00 6.04 ATOM 675 CA SER 22 -4.131 33.263 11.833 1.00 6.04 ATOM 676 C SER 22 -2.909 32.361 12.088 1.00 6.04 ATOM 677 O SER 22 -2.918 31.489 12.965 1.00 6.04 ATOM 678 CB SER 22 -4.966 33.481 13.104 1.00 6.24 ATOM 679 OG SER 22 -4.205 34.158 14.094 1.00 6.24 ATOM 680 N LEU 23 -1.842 32.558 11.306 1.00 6.08 ATOM 681 CA LEU 23 -0.519 31.973 11.560 1.00 6.08 ATOM 682 C LEU 23 0.082 32.575 12.850 1.00 6.08 ATOM 683 O LEU 23 0.051 33.795 13.037 1.00 6.08 ATOM 684 CB LEU 23 0.374 32.207 10.322 1.00 5.87 ATOM 685 CG LEU 23 1.864 31.863 10.504 1.00 5.87 ATOM 686 CD1 LEU 23 2.091 30.364 10.713 1.00 5.87 ATOM 687 CD2 LEU 23 2.653 32.296 9.270 1.00 5.87 ATOM 688 N ALA 24 0.643 31.737 13.727 1.00 6.45 ATOM 689 CA ALA 24 1.303 32.174 14.962 1.00 6.45 ATOM 690 C ALA 24 2.661 32.866 14.696 1.00 6.45 ATOM 691 O ALA 24 3.443 32.415 13.854 1.00 6.45 ATOM 692 CB ALA 24 1.465 30.961 15.887 1.00 6.65 ATOM 693 N ALA 25 2.954 33.938 15.444 1.00 5.97 ATOM 694 CA ALA 25 4.206 34.704 15.367 1.00 5.97 ATOM 695 C ALA 25 4.518 35.467 16.675 1.00 5.97 ATOM 696 O ALA 25 3.638 35.698 17.509 1.00 5.97 ATOM 697 CB ALA 25 4.117 35.670 14.174 1.00 5.85 ATOM 698 N ASN 26 5.778 35.887 16.838 1.00 6.02 ATOM 699 CA ASN 26 6.260 36.697 17.965 1.00 6.02 ATOM 700 C ASN 26 5.545 38.062 18.034 1.00 6.02 ATOM 701 O ASN 26 5.591 38.812 17.066 1.00 6.02 ATOM 702 CB ASN 26 7.780 36.881 17.788 1.00 6.10 ATOM 703 CG ASN 26 8.374 37.830 18.817 1.00 6.10 ATOM 704 OD1 ASN 26 8.557 37.481 19.976 1.00 6.10 ATOM 705 ND2 ASN 26 8.680 39.053 18.444 1.00 6.10 ATOM 706 N GLU 27 4.923 38.396 19.173 1.00 5.81 ATOM 707 CA GLU 27 4.247 39.679 19.497 1.00 5.81 ATOM 708 C GLU 27 3.103 40.155 18.564 1.00 5.81 ATOM 709 O GLU 27 2.312 41.008 18.969 1.00 5.81 ATOM 710 CB GLU 27 5.291 40.794 19.719 1.00 6.10 ATOM 711 CG GLU 27 6.234 40.557 20.914 1.00 6.10 ATOM 712 CD GLU 27 5.514 40.443 22.276 1.00 6.10 ATOM 713 OE1 GLU 27 4.471 41.107 22.496 1.00 6.10 ATOM 714 OE2 GLU 27 6.003 39.692 23.156 1.00 6.10 ATOM 715 N LEU 28 2.954 39.610 17.352 1.00 5.33 ATOM 716 CA LEU 28 1.847 39.916 16.433 1.00 5.33 ATOM 717 C LEU 28 0.523 39.299 16.921 1.00 5.33 ATOM 718 O LEU 28 0.520 38.223 17.528 1.00 5.33 ATOM 719 CB LEU 28 2.171 39.443 15.001 1.00 5.13 ATOM 720 CG LEU 28 3.525 39.900 14.422 1.00 5.13 ATOM 721 CD1 LEU 28 3.638 39.444 12.969 1.00 5.13 ATOM 722 CD2 LEU 28 3.724 41.414 14.461 1.00 5.13 ATOM 723 N ARG 29 -0.606 39.963 16.640 1.00 5.61 ATOM 724 CA ARG 29 -1.969 39.528 17.019 1.00 5.61 ATOM 725 C ARG 29 -3.016 39.954 15.984 1.00 5.61 ATOM 726 O ARG 29 -2.779 40.844 15.170 1.00 5.61 ATOM 727 CB ARG 29 -2.374 40.106 18.395 1.00 6.25 ATOM 728 CG ARG 29 -1.528 39.688 19.607 1.00 6.25 ATOM 729 CD ARG 29 -1.669 38.198 19.944 1.00 6.25 ATOM 730 NE ARG 29 -0.893 37.858 21.152 1.00 6.25 ATOM 731 CZ ARG 29 0.364 37.452 21.215 1.00 6.25 ATOM 732 NH1 ARG 29 0.900 37.181 22.370 1.00 6.25 ATOM 733 NH2 ARG 29 1.108 37.308 20.153 1.00 6.25 ATOM 734 N VAL 30 -4.203 39.359 16.084 1.00 5.65 ATOM 735 CA VAL 30 -5.405 39.703 15.310 1.00 5.65 ATOM 736 C VAL 30 -6.571 39.944 16.274 1.00 5.65 ATOM 737 O VAL 30 -6.830 39.108 17.144 1.00 5.65 ATOM 738 CB VAL 30 -5.741 38.571 14.319 1.00 5.67 ATOM 739 CG1 VAL 30 -7.042 38.832 13.560 1.00 5.67 ATOM 740 CG2 VAL 30 -4.629 38.383 13.280 1.00 5.67 ATOM 741 N THR 31 -7.287 41.058 16.115 1.00 5.95 ATOM 742 CA THR 31 -8.521 41.371 16.863 1.00 5.95 ATOM 743 C THR 31 -9.711 41.568 15.910 1.00 5.95 ATOM 744 O THR 31 -9.621 41.276 14.715 1.00 5.95 ATOM 745 CB THR 31 -8.327 42.572 17.806 1.00 6.02 ATOM 746 OG1 THR 31 -8.283 43.777 17.078 1.00 6.02 ATOM 747 CG2 THR 31 -7.063 42.473 18.662 1.00 6.02 ATOM 748 N GLU 32 -10.862 42.018 16.420 1.00 6.09 ATOM 749 CA GLU 32 -12.110 42.137 15.651 1.00 6.09 ATOM 750 C GLU 32 -12.078 43.176 14.506 1.00 6.09 ATOM 751 O GLU 32 -12.980 43.167 13.663 1.00 6.09 ATOM 752 CB GLU 32 -13.298 42.373 16.608 1.00 6.48 ATOM 753 CG GLU 32 -13.404 43.774 17.238 1.00 6.48 ATOM 754 CD GLU 32 -12.237 44.151 18.175 1.00 6.48 ATOM 755 OE1 GLU 32 -11.697 43.264 18.883 1.00 6.48 ATOM 756 OE2 GLU 32 -11.871 45.350 18.222 1.00 6.48 ATOM 757 N ARG 33 -11.052 44.039 14.435 1.00 5.27 ATOM 758 CA ARG 33 -10.791 44.941 13.294 1.00 5.27 ATOM 759 C ARG 33 -9.295 44.982 12.914 1.00 5.27 ATOM 760 O ARG 33 -8.972 44.474 11.835 1.00 5.27 ATOM 761 CB ARG 33 -11.414 46.336 13.524 1.00 5.82 ATOM 762 CG ARG 33 -12.933 46.400 13.283 1.00 5.82 ATOM 763 CD ARG 33 -13.498 47.791 13.599 1.00 5.82 ATOM 764 NE ARG 33 -13.357 48.107 15.039 1.00 5.82 ATOM 765 CZ ARG 33 -12.636 49.064 15.597 1.00 5.82 ATOM 766 NH1 ARG 33 -12.503 49.107 16.891 1.00 5.82 ATOM 767 NH2 ARG 33 -12.026 49.980 14.897 1.00 5.82 ATOM 768 N PRO 34 -8.378 45.551 13.725 1.00 4.77 ATOM 769 CA PRO 34 -6.968 45.662 13.353 1.00 4.77 ATOM 770 C PRO 34 -6.131 44.385 13.554 1.00 4.77 ATOM 771 O PRO 34 -6.416 43.521 14.389 1.00 4.77 ATOM 772 CB PRO 34 -6.408 46.796 14.216 1.00 5.02 ATOM 773 CG PRO 34 -7.241 46.698 15.490 1.00 5.02 ATOM 774 CD PRO 34 -8.616 46.320 14.942 1.00 5.02 ATOM 775 N PHE 35 -5.038 44.312 12.795 1.00 4.61 ATOM 776 CA PHE 35 -3.924 43.376 12.980 1.00 4.61 ATOM 777 C PHE 35 -2.786 44.144 13.682 1.00 4.61 ATOM 778 O PHE 35 -2.425 45.240 13.235 1.00 4.61 ATOM 779 CB PHE 35 -3.510 42.834 11.603 1.00 4.64 ATOM 780 CG PHE 35 -2.392 41.803 11.571 1.00 4.64 ATOM 781 CD1 PHE 35 -2.664 40.494 11.128 1.00 4.64 ATOM 782 CD2 PHE 35 -1.072 42.148 11.928 1.00 4.64 ATOM 783 CE1 PHE 35 -1.643 39.529 11.095 1.00 4.64 ATOM 784 CE2 PHE 35 -0.051 41.181 11.895 1.00 4.64 ATOM 785 CZ PHE 35 -0.337 39.868 11.485 1.00 4.64 ATOM 786 N TRP 36 -2.233 43.605 14.775 1.00 4.74 ATOM 787 CA TRP 36 -1.202 44.262 15.593 1.00 4.74 ATOM 788 C TRP 36 0.228 43.944 15.138 1.00 4.74 ATOM 789 O TRP 36 0.594 42.784 14.945 1.00 4.74 ATOM 790 CB TRP 36 -1.376 43.941 17.083 1.00 5.52 ATOM 791 CG TRP 36 -2.608 44.462 17.769 1.00 5.52 ATOM 792 CD1 TRP 36 -3.451 45.417 17.304 1.00 5.52 ATOM 793 CD2 TRP 36 -3.116 44.103 19.093 1.00 5.52 ATOM 794 NE1 TRP 36 -4.457 45.640 18.225 1.00 5.52 ATOM 795 CE2 TRP 36 -4.309 44.847 19.343 1.00 5.52 ATOM 796 CE3 TRP 36 -2.689 43.224 20.114 1.00 5.52 ATOM 797 CZ2 TRP 36 -5.052 44.704 20.524 1.00 5.52 ATOM 798 CZ3 TRP 36 -3.440 43.051 21.293 1.00 5.52 ATOM 799 CH2 TRP 36 -4.622 43.785 21.498 1.00 5.52 ATOM 800 N ILE 37 1.049 44.994 15.039 1.00 4.52 ATOM 801 CA ILE 37 2.410 44.999 14.461 1.00 4.52 ATOM 802 C ILE 37 3.532 45.122 15.520 1.00 4.52 ATOM 803 O ILE 37 4.607 45.656 15.252 1.00 4.52 ATOM 804 CB ILE 37 2.486 46.063 13.336 1.00 4.31 ATOM 805 CG1 ILE 37 2.237 47.492 13.883 1.00 4.31 ATOM 806 CG2 ILE 37 1.519 45.673 12.200 1.00 4.31 ATOM 807 CD1 ILE 37 2.158 48.589 12.820 1.00 4.31 ATOM 808 N SER 38 3.282 44.640 16.743 1.00 5.06 ATOM 809 CA SER 38 4.105 44.863 17.951 1.00 5.06 ATOM 810 C SER 38 5.494 44.187 18.026 1.00 5.06 ATOM 811 O SER 38 6.211 44.413 19.003 1.00 5.06 ATOM 812 CB SER 38 3.277 44.483 19.185 1.00 5.28 ATOM 813 OG SER 38 2.083 45.251 19.205 1.00 5.28 ATOM 814 N SER 39 5.911 43.383 17.040 1.00 5.17 ATOM 815 CA SER 39 7.295 42.870 16.940 1.00 5.17 ATOM 816 C SER 39 8.269 43.946 16.425 1.00 5.17 ATOM 817 O SER 39 7.897 44.748 15.565 1.00 5.17 ATOM 818 CB SER 39 7.336 41.645 16.021 1.00 5.03 ATOM 819 OG SER 39 8.641 41.101 15.927 1.00 5.03 ATOM 820 N PHE 40 9.520 43.947 16.911 1.00 5.15 ATOM 821 CA PHE 40 10.573 44.891 16.495 1.00 5.15 ATOM 822 C PHE 40 11.911 44.208 16.162 1.00 5.15 ATOM 823 O PHE 40 12.293 43.198 16.760 1.00 5.15 ATOM 824 CB PHE 40 10.749 46.007 17.543 1.00 5.54 ATOM 825 CG PHE 40 9.593 46.988 17.681 1.00 5.54 ATOM 826 CD1 PHE 40 9.209 47.445 18.957 1.00 5.54 ATOM 827 CD2 PHE 40 8.954 47.516 16.539 1.00 5.54 ATOM 828 CE1 PHE 40 8.212 48.428 19.086 1.00 5.54 ATOM 829 CE2 PHE 40 7.928 48.464 16.669 1.00 5.54 ATOM 830 CZ PHE 40 7.563 48.927 17.940 1.00 5.54 ATOM 831 N ILE 41 12.619 44.779 15.180 1.00 5.27 ATOM 832 CA ILE 41 13.810 44.198 14.537 1.00 5.27 ATOM 833 C ILE 41 15.091 44.584 15.299 1.00 5.27 ATOM 834 O ILE 41 15.331 45.764 15.563 1.00 5.27 ATOM 835 CB ILE 41 13.846 44.620 13.045 1.00 5.15 ATOM 836 CG1 ILE 41 12.593 44.099 12.295 1.00 5.15 ATOM 837 CG2 ILE 41 15.117 44.105 12.348 1.00 5.15 ATOM 838 CD1 ILE 41 12.389 44.716 10.907 1.00 5.15 ATOM 839 N GLY 42 15.931 43.592 15.625 1.00 5.92 ATOM 840 CA GLY 42 17.171 43.763 16.399 1.00 5.92 ATOM 841 C GLY 42 18.412 43.191 15.703 1.00 5.92 ATOM 842 O GLY 42 18.526 41.975 15.561 1.00 5.92 ATOM 843 N ARG 43 19.351 44.071 15.321 1.00 6.21 ATOM 844 CA ARG 43 20.696 43.775 14.772 1.00 6.21 ATOM 845 C ARG 43 20.690 42.870 13.521 1.00 6.21 ATOM 846 O ARG 43 20.838 41.650 13.604 1.00 6.21 ATOM 847 CB ARG 43 21.601 43.261 15.913 1.00 7.15 ATOM 848 CG ARG 43 23.092 43.264 15.530 1.00 7.15 ATOM 849 CD ARG 43 23.977 42.669 16.637 1.00 7.15 ATOM 850 NE ARG 43 23.677 41.243 16.887 1.00 7.15 ATOM 851 CZ ARG 43 24.007 40.205 16.134 1.00 7.15 ATOM 852 NH1 ARG 43 23.586 39.012 16.442 1.00 7.15 ATOM 853 NH2 ARG 43 24.751 40.323 15.069 1.00 7.15 ATOM 854 N SER 44 20.565 43.503 12.352 1.00 6.06 ATOM 855 CA SER 44 20.723 42.920 10.999 1.00 6.06 ATOM 856 C SER 44 19.665 41.895 10.542 1.00 6.06 ATOM 857 O SER 44 19.773 41.358 9.435 1.00 6.06 ATOM 858 CB SER 44 22.145 42.365 10.794 1.00 6.26 ATOM 859 OG SER 44 23.136 43.316 11.168 1.00 6.26 ATOM 860 N LYS 45 18.637 41.617 11.356 1.00 5.70 ATOM 861 CA LYS 45 17.521 40.705 11.026 1.00 5.70 ATOM 862 C LYS 45 16.540 41.346 10.033 1.00 5.70 ATOM 863 O LYS 45 16.488 42.566 9.890 1.00 5.70 ATOM 864 CB LYS 45 16.824 40.255 12.327 1.00 6.00 ATOM 865 CG LYS 45 17.755 39.393 13.202 1.00 6.00 ATOM 866 CD LYS 45 17.178 39.168 14.607 1.00 6.00 ATOM 867 CE LYS 45 18.279 38.634 15.536 1.00 6.00 ATOM 868 NZ LYS 45 17.928 38.811 16.973 1.00 6.00 TER END