####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 77 ( 476), selected 77 , name S0953s2TS208_3-D3 # Molecule2: number of CA atoms 77 ( 476), selected 77 , name S0953s2-D3.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap S0953s2TS208_3-D3.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 18 210 - 227 4.98 24.56 LCS_AVERAGE: 20.26 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 194 - 201 1.73 15.38 LONGEST_CONTINUOUS_SEGMENT: 8 195 - 202 1.74 15.92 LONGEST_CONTINUOUS_SEGMENT: 8 196 - 203 1.93 15.64 LONGEST_CONTINUOUS_SEGMENT: 8 202 - 209 1.98 20.12 LONGEST_CONTINUOUS_SEGMENT: 8 214 - 221 1.81 27.15 LCS_AVERAGE: 8.33 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 5 167 - 171 0.80 14.80 LONGEST_CONTINUOUS_SEGMENT: 5 198 - 202 0.95 17.26 LONGEST_CONTINUOUS_SEGMENT: 5 200 - 204 0.96 19.75 LONGEST_CONTINUOUS_SEGMENT: 5 201 - 205 0.78 18.54 LONGEST_CONTINUOUS_SEGMENT: 5 212 - 216 0.94 24.07 LONGEST_CONTINUOUS_SEGMENT: 5 213 - 217 0.56 24.97 LONGEST_CONTINUOUS_SEGMENT: 5 216 - 220 0.97 28.55 LONGEST_CONTINUOUS_SEGMENT: 5 217 - 221 0.50 29.57 LCS_AVERAGE: 5.40 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 77 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT G 152 G 152 3 4 6 3 3 3 5 5 5 6 9 10 12 13 15 16 18 22 26 31 36 38 40 LCS_GDT G 153 G 153 3 4 13 3 3 3 5 5 6 6 9 10 12 13 15 17 22 25 29 31 36 38 40 LCS_GDT G 154 G 154 3 4 14 3 3 3 5 5 6 7 8 12 14 15 18 20 23 25 29 31 36 38 40 LCS_GDT G 155 G 155 3 5 17 3 3 4 5 6 6 11 12 14 16 17 20 21 23 25 29 31 36 38 40 LCS_GDT G 156 G 156 4 7 17 4 4 4 5 7 8 11 12 15 17 18 20 21 23 25 29 31 36 38 40 LCS_GDT G 157 G 157 4 7 17 4 4 4 5 7 9 11 15 16 18 21 24 27 28 28 29 31 36 38 40 LCS_GDT G 158 G 158 4 7 17 4 5 6 8 8 9 11 12 15 17 21 24 27 28 28 29 31 36 38 40 LCS_GDT F 159 F 159 4 7 17 4 4 6 8 8 9 11 15 16 18 21 24 27 28 28 29 31 36 38 40 LCS_GDT R 160 R 160 4 7 17 3 4 6 8 8 9 11 15 16 18 21 24 27 28 28 29 31 36 38 40 LCS_GDT V 161 V 161 4 7 17 3 5 6 8 8 9 11 15 16 18 21 24 27 28 28 29 31 36 38 40 LCS_GDT G 162 G 162 4 7 17 3 4 4 5 6 7 9 12 15 18 21 24 27 28 28 29 31 36 38 40 LCS_GDT H 163 H 163 4 6 17 4 4 4 5 6 7 8 11 14 17 20 24 27 28 28 28 31 36 38 40 LCS_GDT T 164 T 164 4 6 17 4 4 5 8 9 10 12 14 16 18 20 24 27 28 28 30 33 36 38 40 LCS_GDT E 165 E 165 4 6 17 4 4 5 8 9 10 12 14 16 18 20 23 27 28 28 30 33 36 38 40 LCS_GDT A 166 A 166 4 6 17 4 4 4 5 6 7 8 11 13 17 20 23 27 28 28 30 33 36 38 40 LCS_GDT G 167 G 167 5 6 17 0 5 5 5 6 7 10 12 16 18 21 24 27 28 28 30 33 36 38 40 LCS_GDT G 168 G 168 5 6 17 3 5 5 5 6 8 12 15 16 18 21 24 27 28 28 30 33 36 38 40 LCS_GDT G 169 G 169 5 6 17 3 5 5 6 6 8 11 15 16 18 21 24 27 28 28 30 33 36 38 40 LCS_GDT G 170 G 170 5 6 17 3 5 5 5 6 7 9 15 16 18 21 24 27 28 28 30 33 36 38 40 LCS_GDT G 171 G 171 5 6 17 3 5 5 5 6 7 9 12 15 18 20 24 27 28 28 30 33 36 38 40 LCS_GDT R 172 R 172 4 5 17 3 4 4 5 5 7 9 11 12 16 18 21 24 26 28 30 33 36 38 40 LCS_GDT P 173 P 173 4 5 14 3 4 4 5 5 7 9 11 12 13 15 16 19 20 24 29 32 35 38 40 LCS_GDT L 174 L 174 3 5 14 3 3 5 5 5 7 9 11 12 13 15 16 19 24 27 30 33 35 38 39 LCS_GDT G 175 G 175 4 5 14 3 4 5 5 5 7 9 11 12 13 15 16 19 20 24 29 30 35 38 39 LCS_GDT A 176 A 176 4 5 14 3 4 5 6 6 7 9 11 12 13 17 20 24 26 28 30 33 36 38 40 LCS_GDT G 177 G 177 4 5 14 3 4 4 4 5 7 9 11 12 13 17 20 24 26 28 30 33 36 38 40 LCS_GDT G 178 G 178 4 5 14 3 4 4 6 8 8 10 11 14 16 17 20 21 23 25 29 31 36 38 40 LCS_GDT V 179 V 179 3 5 14 3 3 4 6 8 8 9 11 14 16 17 20 21 23 25 29 31 36 38 40 LCS_GDT S 180 S 180 3 4 14 3 3 3 6 8 8 11 12 14 16 17 20 21 23 26 29 31 36 38 40 LCS_GDT S 181 S 181 3 4 14 3 3 3 4 4 6 11 12 14 16 17 20 27 28 28 29 31 36 38 40 LCS_GDT L 182 L 182 3 7 13 0 3 3 4 6 7 9 12 14 17 21 24 27 28 28 29 33 36 38 40 LCS_GDT N 183 N 183 4 7 12 0 3 4 5 6 8 11 15 16 18 21 24 27 28 28 30 33 36 38 40 LCS_GDT L 184 L 184 4 7 12 2 3 4 5 6 8 11 15 16 18 21 24 27 28 28 30 33 36 38 40 LCS_GDT N 185 N 185 4 7 12 3 4 4 5 6 7 11 15 16 18 21 24 27 28 28 29 32 36 38 40 LCS_GDT G 186 G 186 4 7 11 3 4 4 5 6 7 7 8 12 17 21 24 27 28 28 28 31 36 38 40 LCS_GDT D 187 D 187 4 7 11 3 4 4 5 6 7 11 15 16 18 21 24 27 28 28 28 31 36 38 40 LCS_GDT N 188 N 188 4 7 11 3 4 4 5 6 8 11 15 16 18 21 24 27 28 28 28 30 34 37 40 LCS_GDT A 189 A 189 4 6 11 3 4 4 6 7 9 11 15 16 18 21 24 27 28 28 29 31 36 38 40 LCS_GDT T 190 T 190 4 6 13 3 4 4 5 6 9 9 11 13 14 15 17 20 24 25 29 31 36 38 40 LCS_GDT L 191 L 191 4 6 15 3 4 4 5 5 6 7 7 9 10 11 13 19 24 25 29 31 36 38 40 LCS_GDT G 192 G 192 4 5 15 3 4 4 5 6 7 7 8 9 11 17 20 22 24 26 29 31 36 38 40 LCS_GDT A 193 A 193 4 5 15 3 4 4 5 5 7 9 11 12 17 20 21 24 26 28 30 33 36 38 40 LCS_GDT P 194 P 194 4 8 15 3 5 6 8 9 10 12 14 16 18 20 21 24 26 28 30 33 35 38 39 LCS_GDT G 195 G 195 4 8 15 3 5 6 8 9 10 11 14 16 17 19 21 24 26 28 30 33 35 38 39 LCS_GDT R 196 R 196 4 8 16 3 5 6 8 9 10 12 14 16 18 20 21 24 26 28 30 33 35 38 39 LCS_GDT G 197 G 197 4 8 16 3 4 5 8 9 10 12 14 16 18 20 21 24 26 28 30 33 35 38 39 LCS_GDT Y 198 Y 198 5 8 16 3 4 5 7 8 10 11 14 16 18 20 21 24 26 28 30 33 35 38 39 LCS_GDT Q 199 Q 199 5 8 16 3 4 5 8 9 10 12 14 16 18 20 21 24 26 28 30 33 35 38 39 LCS_GDT L 200 L 200 5 8 16 3 4 6 8 9 10 12 14 16 18 20 21 24 26 28 30 33 35 38 39 LCS_GDT G 201 G 201 5 8 16 3 5 6 8 9 10 12 14 16 18 20 21 24 26 28 30 33 35 38 39 LCS_GDT N 202 N 202 5 8 16 3 5 6 7 8 10 12 14 16 18 20 21 24 26 28 30 33 35 38 39 LCS_GDT D 203 D 203 5 8 16 3 5 6 6 8 10 12 14 16 18 20 21 24 26 28 30 33 35 38 39 LCS_GDT Y 204 Y 204 5 8 16 3 5 6 6 8 9 11 13 15 18 20 21 24 26 28 30 33 35 38 39 LCS_GDT A 205 A 205 5 8 16 3 5 6 6 8 9 9 11 13 14 17 20 24 26 28 30 33 35 38 39 LCS_GDT G 206 G 206 3 8 16 3 3 4 6 8 9 10 11 13 14 17 20 22 24 26 29 30 35 36 39 LCS_GDT N 207 N 207 3 8 16 3 3 4 6 7 8 8 10 11 14 15 17 18 21 22 24 27 29 32 38 LCS_GDT G 208 G 208 4 8 16 4 4 4 6 8 9 9 11 13 14 16 17 18 21 22 26 28 30 36 38 LCS_GDT G 209 G 209 4 8 16 4 4 4 6 8 9 10 11 13 14 16 17 20 24 25 26 29 35 36 39 LCS_GDT D 210 D 210 4 5 18 4 4 4 5 8 9 10 11 13 14 16 17 20 24 25 26 29 35 36 39 LCS_GDT V 211 V 211 4 7 18 4 4 4 4 5 7 8 9 11 13 14 18 20 24 25 29 29 35 36 39 LCS_GDT G 212 G 212 5 7 18 3 4 5 6 7 7 8 10 11 13 17 20 22 24 26 29 30 35 36 39 LCS_GDT N 213 N 213 5 7 18 3 5 5 6 7 7 9 10 11 14 16 20 24 26 27 30 33 35 38 39 LCS_GDT P 214 P 214 5 8 18 3 5 5 6 8 10 12 14 16 18 20 21 24 26 28 30 33 35 38 39 LCS_GDT G 215 G 215 5 8 18 3 5 6 7 9 10 11 14 16 18 20 21 24 26 28 30 33 35 38 39 LCS_GDT S 216 S 216 5 8 18 3 5 6 7 7 8 9 10 11 13 15 16 21 24 25 30 33 35 38 39 LCS_GDT A 217 A 217 5 8 18 3 5 6 7 7 8 9 10 11 13 14 15 16 18 19 22 25 28 35 37 LCS_GDT S 218 S 218 5 8 18 4 5 6 7 7 8 9 10 11 13 14 15 16 18 19 22 23 26 32 32 LCS_GDT S 219 S 219 5 8 18 4 5 6 7 7 8 9 10 11 13 14 15 16 18 19 22 23 28 32 32 LCS_GDT A 220 A 220 5 8 18 4 5 6 7 7 8 9 10 11 13 14 15 16 18 19 22 23 26 32 32 LCS_GDT E 221 E 221 5 8 18 4 5 6 7 7 8 9 10 11 13 14 15 16 18 19 22 23 28 32 32 LCS_GDT M 222 M 222 4 5 18 3 4 4 4 5 6 7 10 11 13 14 15 16 18 19 22 23 28 32 32 LCS_GDT G 223 G 223 4 5 18 3 4 4 4 5 5 7 10 11 13 14 15 16 18 19 23 25 30 33 35 LCS_GDT G 224 G 224 4 5 18 3 4 4 4 5 6 6 9 12 18 21 24 27 28 28 28 30 31 35 38 LCS_GDT G 225 G 225 4 4 18 3 4 5 6 6 8 11 15 16 18 21 24 27 28 28 28 31 34 37 39 LCS_GDT A 226 A 226 4 4 18 3 3 5 6 7 8 11 15 16 18 21 24 27 28 28 28 32 35 38 39 LCS_GDT A 227 A 227 4 4 18 3 4 5 6 6 6 11 11 15 17 20 24 27 28 28 30 33 35 38 39 LCS_GDT G 228 G 228 4 4 7 0 4 5 6 6 6 6 7 10 12 14 15 17 27 27 28 30 32 38 39 LCS_AVERAGE LCS_A: 11.33 ( 5.40 8.33 20.26 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 5 6 8 9 10 12 15 16 18 21 24 27 28 28 30 33 36 38 40 GDT PERCENT_AT 5.19 6.49 7.79 10.39 11.69 12.99 15.58 19.48 20.78 23.38 27.27 31.17 35.06 36.36 36.36 38.96 42.86 46.75 49.35 51.95 GDT RMS_LOCAL 0.24 0.50 0.80 1.12 1.58 1.78 2.66 2.93 3.17 3.47 3.76 4.19 4.51 4.61 4.61 5.65 6.01 6.95 6.57 7.28 GDT RMS_ALL_AT 29.00 29.57 14.90 15.03 14.43 14.19 13.64 13.85 13.84 13.95 13.99 13.84 14.07 14.03 14.03 13.03 12.92 14.63 12.87 14.69 # Checking swapping # possible swapping detected: E 165 E 165 # possible swapping detected: Y 204 Y 204 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA G 152 G 152 17.928 0 0.089 0.089 17.928 0.000 0.000 - LGA G 153 G 153 18.158 0 0.035 0.035 18.570 0.000 0.000 - LGA G 154 G 154 17.348 0 0.532 0.532 17.587 0.000 0.000 - LGA G 155 G 155 14.452 0 0.424 0.424 15.263 0.000 0.000 - LGA G 156 G 156 10.097 0 0.430 0.430 11.935 0.000 0.000 - LGA G 157 G 157 3.649 0 0.106 0.106 6.506 3.182 3.182 - LGA G 158 G 158 5.227 0 0.092 0.092 5.227 18.636 18.636 - LGA F 159 F 159 2.795 0 0.110 0.164 4.148 17.727 24.628 3.966 LGA R 160 R 160 2.655 0 0.615 1.618 8.578 25.909 9.917 8.578 LGA V 161 V 161 2.497 0 0.421 1.454 3.171 40.000 34.805 2.197 LGA G 162 G 162 6.755 0 0.355 0.355 8.586 0.000 0.000 - LGA H 163 H 163 8.387 0 0.650 1.293 15.943 0.000 0.000 15.550 LGA T 164 T 164 8.284 0 0.057 0.599 9.420 0.000 0.000 8.306 LGA E 165 E 165 8.167 0 0.054 1.103 12.637 0.000 0.000 12.637 LGA A 166 A 166 8.127 0 0.481 0.512 8.905 0.000 0.000 - LGA G 167 G 167 5.250 0 0.561 0.561 5.665 1.364 1.364 - LGA G 168 G 168 2.137 0 0.689 0.689 2.946 39.545 39.545 - LGA G 169 G 169 1.194 0 0.374 0.374 2.178 59.091 59.091 - LGA G 170 G 170 3.740 0 0.549 0.549 4.806 10.455 10.455 - LGA G 171 G 171 5.765 0 0.355 0.355 8.922 0.455 0.455 - LGA R 172 R 172 12.979 0 0.437 1.017 23.689 0.000 0.000 23.689 LGA P 173 P 173 16.109 0 0.112 0.498 17.975 0.000 0.000 16.128 LGA L 174 L 174 19.876 0 0.185 0.871 24.806 0.000 0.000 24.806 LGA G 175 G 175 16.449 0 0.563 0.563 17.117 0.000 0.000 - LGA A 176 A 176 12.442 0 0.557 0.595 14.031 0.000 0.000 - LGA G 177 G 177 11.513 0 0.182 0.182 12.203 0.000 0.000 - LGA G 178 G 178 11.888 0 0.558 0.558 13.400 0.000 0.000 - LGA V 179 V 179 13.943 0 0.219 1.103 18.805 0.000 0.000 17.407 LGA S 180 S 180 10.415 0 0.273 0.978 11.955 0.000 0.000 11.634 LGA S 181 S 181 6.506 0 0.627 0.832 8.011 0.000 0.303 4.577 LGA L 182 L 182 4.812 0 0.580 0.731 8.439 3.636 1.818 8.054 LGA N 183 N 183 2.861 0 0.353 0.541 4.579 25.909 18.182 3.068 LGA L 184 L 184 3.568 0 0.242 0.266 10.497 16.818 8.409 10.497 LGA N 185 N 185 3.792 0 0.695 0.918 5.670 13.636 8.864 5.670 LGA G 186 G 186 5.103 0 0.219 0.219 5.103 3.182 3.182 - LGA D 187 D 187 3.173 0 0.163 1.157 3.699 18.636 27.727 1.689 LGA N 188 N 188 1.727 0 0.102 1.187 5.100 67.727 40.682 5.100 LGA A 189 A 189 3.400 0 0.069 0.085 5.367 17.273 13.818 - LGA T 190 T 190 9.544 0 0.105 1.075 12.206 0.000 0.000 9.641 LGA L 191 L 191 14.915 0 0.619 1.204 21.642 0.000 0.000 19.554 LGA G 192 G 192 17.526 0 0.378 0.378 17.978 0.000 0.000 - LGA A 193 A 193 18.442 0 0.138 0.185 19.764 0.000 0.000 - LGA P 194 P 194 18.329 0 0.688 0.783 22.204 0.000 0.000 17.434 LGA G 195 G 195 20.080 0 0.268 0.268 20.080 0.000 0.000 - LGA R 196 R 196 19.304 0 0.063 1.396 31.495 0.000 0.000 29.840 LGA G 197 G 197 13.091 0 0.522 0.522 15.382 0.000 0.000 - LGA Y 198 Y 198 12.831 0 0.328 1.224 15.137 0.000 0.000 15.137 LGA Q 199 Q 199 17.385 0 0.016 0.847 23.348 0.000 0.000 23.078 LGA L 200 L 200 17.691 0 0.297 1.153 20.044 0.000 0.000 18.640 LGA G 201 G 201 22.263 0 0.163 0.163 23.644 0.000 0.000 - LGA N 202 N 202 22.945 0 0.335 0.433 27.403 0.000 0.000 27.403 LGA D 203 D 203 17.906 0 0.124 0.229 19.270 0.000 0.000 16.085 LGA Y 204 Y 204 16.168 0 0.099 1.413 19.872 0.000 0.000 19.872 LGA A 205 A 205 14.333 0 0.052 0.072 14.456 0.000 0.000 - LGA G 206 G 206 16.136 0 0.241 0.241 16.584 0.000 0.000 - LGA N 207 N 207 18.110 0 0.620 0.558 22.177 0.000 0.000 19.255 LGA G 208 G 208 16.339 0 0.040 0.040 16.347 0.000 0.000 - LGA G 209 G 209 16.891 0 0.085 0.085 16.893 0.000 0.000 - LGA D 210 D 210 16.688 0 0.254 0.408 18.870 0.000 0.000 18.870 LGA V 211 V 211 15.744 0 0.030 0.287 19.364 0.000 0.000 16.903 LGA G 212 G 212 15.406 0 0.593 0.593 15.931 0.000 0.000 - LGA N 213 N 213 15.636 0 0.398 0.448 20.382 0.000 0.000 20.147 LGA P 214 P 214 13.156 0 0.094 0.123 13.940 0.000 0.000 13.113 LGA G 215 G 215 14.962 0 0.084 0.084 15.721 0.000 0.000 - LGA S 216 S 216 18.355 0 0.025 0.062 21.077 0.000 0.000 21.077 LGA A 217 A 217 19.463 0 0.091 0.142 21.487 0.000 0.000 - LGA S 218 S 218 23.843 0 0.075 0.131 25.271 0.000 0.000 25.211 LGA S 219 S 219 26.822 0 0.040 0.636 30.362 0.000 0.000 30.362 LGA A 220 A 220 26.708 0 0.159 0.172 28.203 0.000 0.000 - LGA E 221 E 221 20.316 0 0.035 0.808 27.646 0.000 0.000 27.646 LGA M 222 M 222 15.999 0 0.693 1.512 19.752 0.000 0.000 17.865 LGA G 223 G 223 10.464 0 0.063 0.063 12.614 0.000 0.000 - LGA G 224 G 224 5.215 0 0.662 0.662 6.820 19.545 19.545 - LGA G 225 G 225 2.168 0 0.637 0.637 3.264 28.182 28.182 - LGA A 226 A 226 3.179 0 0.584 0.598 3.603 21.364 22.545 - LGA A 227 A 227 7.114 0 0.066 0.110 8.906 0.000 0.000 - LGA G 228 G 228 10.545 0 0.123 0.123 13.320 0.000 0.000 - # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 77 308 308 100.00 476 476 100.00 77 38 SUMMARY(RMSD_GDC): 12.331 12.232 13.059 5.874 5.134 3.158 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 77 77 4.0 15 2.93 18.831 16.289 0.494 LGA_LOCAL RMSD: 2.934 Number of atoms: 15 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 13.853 Number of assigned atoms: 77 Std_ASGN_ATOMS RMSD: 12.331 Standard rmsd on all 77 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.982197 * X + 0.131945 * Y + 0.133713 * Z + 27.737923 Y_new = -0.019904 * X + -0.634691 * Y + 0.772509 * Z + 45.451832 Z_new = 0.186795 * X + -0.761418 * Y + -0.620766 * Z + 46.058140 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.020262 -0.187899 -2.254782 [DEG: -1.1610 -10.7658 -129.1895 ] ZXZ: 2.970202 2.240515 2.901018 [DEG: 170.1800 128.3721 166.2161 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: S0953s2TS208_3-D3 REMARK 2: S0953s2-D3.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap S0953s2TS208_3-D3.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 77 77 4.0 15 2.93 16.289 12.33 REMARK ---------------------------------------------------------- MOLECULE S0953s2TS208_3-D3 PFRMAT TS TARGET S0953s2 MODEL 3 REFINED PARENT N/A ATOM 1699 N GLY 152 25.292 41.596 65.573 1.00 4.96 ATOM 1700 CA GLY 152 26.616 41.739 66.197 1.00 4.96 ATOM 1701 C GLY 152 26.882 43.164 66.708 1.00 4.96 ATOM 1702 O GLY 152 26.048 44.055 66.534 1.00 4.96 ATOM 1703 N GLY 153 28.040 43.396 67.337 1.00 5.50 ATOM 1704 CA GLY 153 28.435 44.720 67.844 1.00 5.50 ATOM 1705 C GLY 153 29.871 44.778 68.383 1.00 5.50 ATOM 1706 O GLY 153 30.329 43.838 69.033 1.00 5.50 ATOM 1707 N GLY 154 30.564 45.897 68.129 1.00 6.86 ATOM 1708 CA GLY 154 31.994 46.094 68.444 1.00 6.86 ATOM 1709 C GLY 154 32.912 46.194 67.210 1.00 6.86 ATOM 1710 O GLY 154 34.023 45.662 67.220 1.00 6.86 ATOM 1711 N GLY 155 32.452 46.868 66.143 1.00 7.53 ATOM 1712 CA GLY 155 33.133 46.946 64.839 1.00 7.53 ATOM 1713 C GLY 155 32.459 46.065 63.780 1.00 7.53 ATOM 1714 O GLY 155 33.077 45.152 63.230 1.00 7.53 ATOM 1715 N GLY 156 31.165 46.308 63.529 1.00 6.92 ATOM 1716 CA GLY 156 30.308 45.464 62.687 1.00 6.92 ATOM 1717 C GLY 156 29.857 44.203 63.430 1.00 6.92 ATOM 1718 O GLY 156 28.793 44.203 64.052 1.00 6.92 ATOM 1719 N GLY 157 30.654 43.136 63.359 1.00 4.72 ATOM 1720 CA GLY 157 30.483 41.916 64.161 1.00 4.72 ATOM 1721 C GLY 157 31.057 42.031 65.585 1.00 4.72 ATOM 1722 O GLY 157 31.623 43.063 65.955 1.00 4.72 ATOM 1723 N GLY 158 30.904 40.965 66.384 1.00 2.78 ATOM 1724 CA GLY 158 31.541 40.841 67.711 1.00 2.78 ATOM 1725 C GLY 158 32.971 40.271 67.673 1.00 2.78 ATOM 1726 O GLY 158 33.580 40.231 66.607 1.00 2.78 ATOM 1727 N PHE 159 33.447 39.749 68.811 1.00 2.33 ATOM 1728 CA PHE 159 34.775 39.185 69.128 1.00 2.33 ATOM 1729 C PHE 159 35.961 40.169 69.312 1.00 2.33 ATOM 1730 O PHE 159 36.250 40.996 68.444 1.00 2.33 ATOM 1731 CB PHE 159 35.110 37.999 68.207 1.00 3.23 ATOM 1732 CG PHE 159 36.532 37.533 68.380 1.00 3.23 ATOM 1733 CD1 PHE 159 36.842 36.564 69.346 1.00 3.23 ATOM 1734 CD2 PHE 159 37.561 38.166 67.655 1.00 3.23 ATOM 1735 CE1 PHE 159 38.177 36.193 69.556 1.00 3.23 ATOM 1736 CE2 PHE 159 38.894 37.819 67.882 1.00 3.23 ATOM 1737 CZ PHE 159 39.192 36.826 68.820 1.00 3.23 ATOM 1738 N ARG 160 36.743 39.988 70.406 1.00 2.17 ATOM 1739 CA ARG 160 37.917 40.838 70.740 1.00 2.17 ATOM 1740 C ARG 160 39.181 40.197 71.374 1.00 2.17 ATOM 1741 O ARG 160 39.982 40.936 71.943 1.00 2.17 ATOM 1742 CB ARG 160 37.431 42.077 71.529 1.00 2.99 ATOM 1743 CG ARG 160 36.987 41.817 72.977 1.00 2.99 ATOM 1744 CD ARG 160 36.882 43.121 73.794 1.00 2.99 ATOM 1745 NE ARG 160 38.180 43.832 73.897 1.00 2.99 ATOM 1746 CZ ARG 160 39.238 43.520 74.630 1.00 2.99 ATOM 1747 NH1 ARG 160 40.345 44.191 74.497 1.00 2.99 ATOM 1748 NH2 ARG 160 39.225 42.553 75.504 1.00 2.99 ATOM 1749 N VAL 161 39.394 38.872 71.327 1.00 1.93 ATOM 1750 CA VAL 161 40.553 38.190 71.993 1.00 1.93 ATOM 1751 C VAL 161 41.378 37.272 71.059 1.00 1.93 ATOM 1752 O VAL 161 42.022 37.800 70.151 1.00 1.93 ATOM 1753 CB VAL 161 40.179 37.571 73.361 1.00 2.12 ATOM 1754 CG1 VAL 161 40.003 38.670 74.418 1.00 2.12 ATOM 1755 CG2 VAL 161 38.903 36.723 73.327 1.00 2.12 ATOM 1756 N GLY 162 41.388 35.939 71.237 1.00 2.07 ATOM 1757 CA GLY 162 42.004 34.960 70.311 1.00 2.07 ATOM 1758 C GLY 162 40.963 33.993 69.722 1.00 2.07 ATOM 1759 O GLY 162 40.169 33.432 70.477 1.00 2.07 ATOM 1760 N HIS 163 40.948 33.793 68.394 1.00 1.85 ATOM 1761 CA HIS 163 39.839 33.107 67.695 1.00 1.85 ATOM 1762 C HIS 163 40.178 31.861 66.864 1.00 1.85 ATOM 1763 O HIS 163 41.319 31.638 66.456 1.00 1.85 ATOM 1764 CB HIS 163 39.138 34.107 66.757 1.00 2.29 ATOM 1765 CG HIS 163 37.651 33.913 66.637 1.00 2.29 ATOM 1766 ND1 HIS 163 36.846 33.223 67.546 1.00 2.29 ATOM 1767 CD2 HIS 163 36.859 34.482 65.684 1.00 2.29 ATOM 1768 CE1 HIS 163 35.589 33.399 67.121 1.00 2.29 ATOM 1769 NE2 HIS 163 35.571 34.131 66.000 1.00 2.29 ATOM 1770 N THR 164 39.111 31.139 66.512 1.00 1.90 ATOM 1771 CA THR 164 39.053 30.043 65.531 1.00 1.90 ATOM 1772 C THR 164 37.647 30.047 64.915 1.00 1.90 ATOM 1773 O THR 164 36.663 29.740 65.581 1.00 1.90 ATOM 1774 CB THR 164 39.400 28.661 66.139 1.00 2.09 ATOM 1775 OG1 THR 164 39.590 28.675 67.540 1.00 2.09 ATOM 1776 CG2 THR 164 40.705 28.131 65.542 1.00 2.09 ATOM 1777 N GLU 165 37.521 30.427 63.644 1.00 1.87 ATOM 1778 CA GLU 165 36.222 30.749 63.028 1.00 1.87 ATOM 1779 C GLU 165 35.789 29.785 61.910 1.00 1.87 ATOM 1780 O GLU 165 36.544 29.516 60.974 1.00 1.87 ATOM 1781 CB GLU 165 36.317 32.212 62.557 1.00 2.22 ATOM 1782 CG GLU 165 35.136 32.745 61.739 1.00 2.22 ATOM 1783 CD GLU 165 33.778 32.491 62.412 1.00 2.22 ATOM 1784 OE1 GLU 165 32.898 31.905 61.742 1.00 2.22 ATOM 1785 OE2 GLU 165 33.608 32.855 63.594 1.00 2.22 ATOM 1786 N ALA 166 34.536 29.323 61.940 1.00 2.02 ATOM 1787 CA ALA 166 33.893 28.583 60.849 1.00 2.02 ATOM 1788 C ALA 166 33.445 29.494 59.679 1.00 2.02 ATOM 1789 O ALA 166 32.272 29.556 59.306 1.00 2.02 ATOM 1790 CB ALA 166 32.776 27.699 61.422 1.00 2.12 ATOM 1791 N GLY 167 34.409 30.215 59.093 1.00 2.16 ATOM 1792 CA GLY 167 34.244 30.956 57.836 1.00 2.16 ATOM 1793 C GLY 167 33.273 32.147 57.849 1.00 2.16 ATOM 1794 O GLY 167 32.804 32.556 56.789 1.00 2.16 ATOM 1795 N GLY 168 32.951 32.699 59.020 1.00 2.31 ATOM 1796 CA GLY 168 32.071 33.863 59.172 1.00 2.31 ATOM 1797 C GLY 168 30.586 33.526 59.353 1.00 2.31 ATOM 1798 O GLY 168 29.777 34.445 59.464 1.00 2.31 ATOM 1799 N GLY 169 30.213 32.241 59.422 1.00 2.62 ATOM 1800 CA GLY 169 28.840 31.792 59.678 1.00 2.62 ATOM 1801 C GLY 169 27.855 32.135 58.549 1.00 2.62 ATOM 1802 O GLY 169 27.835 31.451 57.522 1.00 2.62 ATOM 1803 N GLY 170 27.020 33.165 58.758 1.00 3.87 ATOM 1804 CA GLY 170 26.002 33.611 57.790 1.00 3.87 ATOM 1805 C GLY 170 25.891 35.135 57.631 1.00 3.87 ATOM 1806 O GLY 170 26.105 35.661 56.539 1.00 3.87 ATOM 1807 N GLY 171 25.522 35.849 58.703 1.00 4.96 ATOM 1808 CA GLY 171 25.179 37.279 58.663 1.00 4.96 ATOM 1809 C GLY 171 26.319 38.225 59.060 1.00 4.96 ATOM 1810 O GLY 171 27.257 38.441 58.297 1.00 4.96 ATOM 1811 N ARG 172 26.213 38.793 60.268 1.00 4.91 ATOM 1812 CA ARG 172 27.167 39.718 60.933 1.00 4.91 ATOM 1813 C ARG 172 27.557 39.170 62.332 1.00 4.91 ATOM 1814 O ARG 172 27.574 39.937 63.283 1.00 4.91 ATOM 1815 CB ARG 172 26.460 41.102 60.922 1.00 5.89 ATOM 1816 CG ARG 172 27.066 42.317 61.658 1.00 5.89 ATOM 1817 CD ARG 172 26.185 43.562 61.469 1.00 5.89 ATOM 1818 NE ARG 172 26.318 44.476 62.626 1.00 5.89 ATOM 1819 CZ ARG 172 25.427 45.339 63.084 1.00 5.89 ATOM 1820 NH1 ARG 172 25.656 45.983 64.189 1.00 5.89 ATOM 1821 NH2 ARG 172 24.300 45.571 62.475 1.00 5.89 ATOM 1822 N PRO 173 27.849 37.857 62.484 1.00 5.19 ATOM 1823 CA PRO 173 27.911 37.148 63.765 1.00 5.19 ATOM 1824 C PRO 173 28.362 37.898 65.024 1.00 5.19 ATOM 1825 O PRO 173 29.418 38.534 65.079 1.00 5.19 ATOM 1826 CB PRO 173 28.772 35.898 63.544 1.00 5.34 ATOM 1827 CG PRO 173 28.940 35.762 62.037 1.00 5.34 ATOM 1828 CD PRO 173 28.130 36.897 61.422 1.00 5.34 ATOM 1829 N LEU 174 27.625 37.639 66.106 1.00 4.99 ATOM 1830 CA LEU 174 27.973 38.036 67.472 1.00 4.99 ATOM 1831 C LEU 174 29.345 37.495 67.911 1.00 4.99 ATOM 1832 O LEU 174 29.937 38.068 68.812 1.00 4.99 ATOM 1833 CB LEU 174 26.809 37.650 68.416 1.00 5.86 ATOM 1834 CG LEU 174 26.486 36.141 68.541 1.00 5.86 ATOM 1835 CD1 LEU 174 27.237 35.471 69.693 1.00 5.86 ATOM 1836 CD2 LEU 174 24.994 35.930 68.798 1.00 5.86 ATOM 1837 N GLY 175 29.880 36.460 67.246 1.00 4.65 ATOM 1838 CA GLY 175 31.254 35.952 67.399 1.00 4.65 ATOM 1839 C GLY 175 32.168 36.110 66.169 1.00 4.65 ATOM 1840 O GLY 175 33.079 35.307 66.022 1.00 4.65 ATOM 1841 N ALA 176 31.933 37.062 65.255 1.00 4.12 ATOM 1842 CA ALA 176 32.622 37.121 63.950 1.00 4.12 ATOM 1843 C ALA 176 34.118 37.522 63.988 1.00 4.12 ATOM 1844 O ALA 176 34.986 36.748 63.582 1.00 4.12 ATOM 1845 CB ALA 176 31.854 38.073 63.020 1.00 4.20 ATOM 1846 N GLY 177 34.411 38.758 64.407 1.00 3.68 ATOM 1847 CA GLY 177 35.727 39.402 64.341 1.00 3.68 ATOM 1848 C GLY 177 35.643 40.936 64.468 1.00 3.68 ATOM 1849 O GLY 177 35.148 41.594 63.548 1.00 3.68 ATOM 1850 N GLY 178 36.130 41.493 65.587 1.00 3.00 ATOM 1851 CA GLY 178 36.127 42.931 65.895 1.00 3.00 ATOM 1852 C GLY 178 37.527 43.527 66.104 1.00 3.00 ATOM 1853 O GLY 178 37.918 44.435 65.371 1.00 3.00 ATOM 1854 N VAL 179 38.299 43.021 67.080 1.00 2.54 ATOM 1855 CA VAL 179 39.704 43.424 67.367 1.00 2.54 ATOM 1856 C VAL 179 40.579 42.223 67.796 1.00 2.54 ATOM 1857 O VAL 179 40.096 41.096 67.886 1.00 2.54 ATOM 1858 CB VAL 179 39.811 44.624 68.342 1.00 2.86 ATOM 1859 CG1 VAL 179 39.167 45.904 67.799 1.00 2.86 ATOM 1860 CG2 VAL 179 39.239 44.336 69.722 1.00 2.86 ATOM 1861 N SER 180 41.878 42.457 68.031 1.00 2.31 ATOM 1862 CA SER 180 42.895 41.448 68.401 1.00 2.31 ATOM 1863 C SER 180 43.222 40.426 67.290 1.00 2.31 ATOM 1864 O SER 180 43.707 40.864 66.245 1.00 2.31 ATOM 1865 CB SER 180 42.635 40.868 69.800 1.00 2.48 ATOM 1866 OG SER 180 42.593 41.923 70.754 1.00 2.48 ATOM 1867 N SER 181 43.027 39.108 67.477 1.00 2.14 ATOM 1868 CA SER 181 43.534 38.053 66.565 1.00 2.14 ATOM 1869 C SER 181 42.454 37.082 66.062 1.00 2.14 ATOM 1870 O SER 181 41.703 36.520 66.860 1.00 2.14 ATOM 1871 CB SER 181 44.652 37.284 67.282 1.00 2.23 ATOM 1872 OG SER 181 45.154 36.230 66.476 1.00 2.23 ATOM 1873 N LEU 182 42.383 36.853 64.741 1.00 1.88 ATOM 1874 CA LEU 182 41.304 36.109 64.060 1.00 1.88 ATOM 1875 C LEU 182 41.880 35.063 63.076 1.00 1.88 ATOM 1876 O LEU 182 42.709 35.419 62.239 1.00 1.88 ATOM 1877 CB LEU 182 40.421 37.148 63.329 1.00 2.06 ATOM 1878 CG LEU 182 38.956 36.799 63.007 1.00 2.06 ATOM 1879 CD1 LEU 182 38.368 37.919 62.145 1.00 2.06 ATOM 1880 CD2 LEU 182 38.761 35.494 62.237 1.00 2.06 ATOM 1881 N ASN 183 41.414 33.803 63.121 1.00 1.98 ATOM 1882 CA ASN 183 41.827 32.741 62.188 1.00 1.98 ATOM 1883 C ASN 183 40.650 31.882 61.662 1.00 1.98 ATOM 1884 O ASN 183 40.083 31.084 62.413 1.00 1.98 ATOM 1885 CB ASN 183 42.919 31.892 62.871 1.00 2.29 ATOM 1886 CG ASN 183 43.593 30.908 61.924 1.00 2.29 ATOM 1887 OD1 ASN 183 43.405 30.917 60.719 1.00 2.29 ATOM 1888 ND2 ASN 183 44.386 30.000 62.445 1.00 2.29 ATOM 1889 N LEU 184 40.290 32.002 60.376 1.00 1.94 ATOM 1890 CA LEU 184 39.260 31.157 59.730 1.00 1.94 ATOM 1891 C LEU 184 39.770 29.717 59.501 1.00 1.94 ATOM 1892 O LEU 184 40.885 29.544 59.021 1.00 1.94 ATOM 1893 CB LEU 184 38.790 31.748 58.376 1.00 2.13 ATOM 1894 CG LEU 184 38.544 33.266 58.280 1.00 2.13 ATOM 1895 CD1 LEU 184 38.046 33.611 56.878 1.00 2.13 ATOM 1896 CD2 LEU 184 37.496 33.753 59.274 1.00 2.13 ATOM 1897 N ASN 185 38.975 28.680 59.790 1.00 2.19 ATOM 1898 CA ASN 185 39.388 27.268 59.621 1.00 2.19 ATOM 1899 C ASN 185 38.275 26.268 59.229 1.00 2.19 ATOM 1900 O ASN 185 38.601 25.174 58.764 1.00 2.19 ATOM 1901 CB ASN 185 40.048 26.794 60.935 1.00 2.46 ATOM 1902 CG ASN 185 41.473 27.288 61.111 1.00 2.46 ATOM 1903 OD1 ASN 185 42.424 26.690 60.629 1.00 2.46 ATOM 1904 ND2 ASN 185 41.680 28.370 61.825 1.00 2.46 ATOM 1905 N GLY 186 36.992 26.591 59.445 1.00 2.20 ATOM 1906 CA GLY 186 35.881 25.624 59.333 1.00 2.20 ATOM 1907 C GLY 186 35.333 25.345 57.921 1.00 2.20 ATOM 1908 O GLY 186 36.074 25.239 56.947 1.00 2.20 ATOM 1909 N ASP 187 34.015 25.157 57.842 1.00 2.28 ATOM 1910 CA ASP 187 33.262 24.674 56.667 1.00 2.28 ATOM 1911 C ASP 187 32.724 25.802 55.748 1.00 2.28 ATOM 1912 O ASP 187 33.085 26.976 55.886 1.00 2.28 ATOM 1913 CB ASP 187 32.159 23.715 57.170 1.00 2.59 ATOM 1914 CG ASP 187 31.234 24.266 58.273 1.00 2.59 ATOM 1915 OD1 ASP 187 31.048 25.499 58.387 1.00 2.59 ATOM 1916 OD2 ASP 187 30.688 23.436 59.040 1.00 2.59 ATOM 1917 N ASN 188 31.900 25.438 54.752 1.00 2.34 ATOM 1918 CA ASN 188 31.274 26.368 53.803 1.00 2.34 ATOM 1919 C ASN 188 30.345 27.370 54.529 1.00 2.34 ATOM 1920 O ASN 188 29.457 26.960 55.285 1.00 2.34 ATOM 1921 CB ASN 188 30.541 25.547 52.725 1.00 2.75 ATOM 1922 CG ASN 188 30.053 26.396 51.559 1.00 2.75 ATOM 1923 OD1 ASN 188 29.214 27.274 51.701 1.00 2.75 ATOM 1924 ND2 ASN 188 30.543 26.154 50.364 1.00 2.75 ATOM 1925 N ALA 189 30.548 28.675 54.305 1.00 2.10 ATOM 1926 CA ALA 189 29.925 29.755 55.082 1.00 2.10 ATOM 1927 C ALA 189 29.801 31.086 54.302 1.00 2.10 ATOM 1928 O ALA 189 30.239 31.193 53.156 1.00 2.10 ATOM 1929 CB ALA 189 30.770 29.928 56.351 1.00 2.06 ATOM 1930 N THR 190 29.223 32.114 54.930 1.00 2.22 ATOM 1931 CA THR 190 28.959 33.447 54.344 1.00 2.22 ATOM 1932 C THR 190 29.102 34.551 55.402 1.00 2.22 ATOM 1933 O THR 190 28.901 34.289 56.585 1.00 2.22 ATOM 1934 CB THR 190 27.541 33.470 53.728 1.00 2.48 ATOM 1935 OG1 THR 190 27.488 32.583 52.627 1.00 2.48 ATOM 1936 CG2 THR 190 27.072 34.826 53.194 1.00 2.48 ATOM 1937 N LEU 191 29.434 35.784 55.001 1.00 2.13 ATOM 1938 CA LEU 191 29.359 36.976 55.863 1.00 2.13 ATOM 1939 C LEU 191 28.854 38.175 55.035 1.00 2.13 ATOM 1940 O LEU 191 29.396 38.471 53.969 1.00 2.13 ATOM 1941 CB LEU 191 30.715 37.208 56.567 1.00 2.12 ATOM 1942 CG LEU 191 30.647 38.071 57.846 1.00 2.12 ATOM 1943 CD1 LEU 191 31.900 37.883 58.699 1.00 2.12 ATOM 1944 CD2 LEU 191 30.541 39.571 57.563 1.00 2.12 ATOM 1945 N GLY 192 27.799 38.837 55.516 1.00 2.52 ATOM 1946 CA GLY 192 27.086 39.931 54.844 1.00 2.52 ATOM 1947 C GLY 192 26.706 41.056 55.813 1.00 2.52 ATOM 1948 O GLY 192 25.524 41.295 56.048 1.00 2.52 ATOM 1949 N ALA 193 27.705 41.713 56.406 1.00 2.64 ATOM 1950 CA ALA 193 27.546 42.807 57.364 1.00 2.64 ATOM 1951 C ALA 193 27.540 44.189 56.665 1.00 2.64 ATOM 1952 O ALA 193 28.527 44.515 56.001 1.00 2.64 ATOM 1953 CB ALA 193 28.700 42.713 58.372 1.00 2.64 ATOM 1954 N PRO 194 26.519 45.055 56.863 1.00 3.14 ATOM 1955 CA PRO 194 26.448 46.376 56.214 1.00 3.14 ATOM 1956 C PRO 194 27.596 47.361 56.532 1.00 3.14 ATOM 1957 O PRO 194 27.787 48.330 55.792 1.00 3.14 ATOM 1958 CB PRO 194 25.085 46.950 56.620 1.00 3.23 ATOM 1959 CG PRO 194 24.229 45.699 56.806 1.00 3.23 ATOM 1960 CD PRO 194 25.218 44.721 57.432 1.00 3.23 ATOM 1961 N GLY 195 28.359 47.132 57.611 1.00 3.02 ATOM 1962 CA GLY 195 29.611 47.838 57.935 1.00 3.02 ATOM 1963 C GLY 195 30.860 47.114 57.401 1.00 3.02 ATOM 1964 O GLY 195 30.896 46.667 56.253 1.00 3.02 ATOM 1965 N ARG 196 31.906 47.007 58.236 1.00 2.66 ATOM 1966 CA ARG 196 33.091 46.148 57.992 1.00 2.66 ATOM 1967 C ARG 196 32.810 44.704 58.453 1.00 2.66 ATOM 1968 O ARG 196 31.961 44.477 59.315 1.00 2.66 ATOM 1969 CB ARG 196 34.341 46.767 58.662 1.00 3.37 ATOM 1970 CG ARG 196 35.126 47.741 57.759 1.00 3.37 ATOM 1971 CD ARG 196 34.285 48.852 57.111 1.00 3.37 ATOM 1972 NE ARG 196 35.091 49.664 56.172 1.00 3.37 ATOM 1973 CZ ARG 196 34.677 50.245 55.055 1.00 3.37 ATOM 1974 NH1 ARG 196 35.505 50.922 54.313 1.00 3.37 ATOM 1975 NH2 ARG 196 33.441 50.170 54.646 1.00 3.37 ATOM 1976 N GLY 197 33.501 43.730 57.849 1.00 2.25 ATOM 1977 CA GLY 197 33.209 42.290 58.008 1.00 2.25 ATOM 1978 C GLY 197 34.229 41.538 58.865 1.00 2.25 ATOM 1979 O GLY 197 33.870 40.936 59.876 1.00 2.25 ATOM 1980 N TYR 198 35.508 41.602 58.473 1.00 2.10 ATOM 1981 CA TYR 198 36.631 40.930 59.146 1.00 2.10 ATOM 1982 C TYR 198 37.620 41.981 59.668 1.00 2.10 ATOM 1983 O TYR 198 38.760 42.085 59.209 1.00 2.10 ATOM 1984 CB TYR 198 37.271 39.892 58.212 1.00 2.28 ATOM 1985 CG TYR 198 36.330 38.813 57.701 1.00 2.28 ATOM 1986 CD1 TYR 198 35.589 39.026 56.521 1.00 2.28 ATOM 1987 CD2 TYR 198 36.206 37.594 58.396 1.00 2.28 ATOM 1988 CE1 TYR 198 34.749 38.011 56.018 1.00 2.28 ATOM 1989 CE2 TYR 198 35.364 36.579 57.897 1.00 2.28 ATOM 1990 CZ TYR 198 34.649 36.778 56.699 1.00 2.28 ATOM 1991 OH TYR 198 33.852 35.786 56.213 1.00 2.28 ATOM 1992 N GLN 199 37.143 42.831 60.579 1.00 2.35 ATOM 1993 CA GLN 199 37.968 43.818 61.274 1.00 2.35 ATOM 1994 C GLN 199 38.737 43.169 62.435 1.00 2.35 ATOM 1995 O GLN 199 38.202 42.318 63.150 1.00 2.35 ATOM 1996 CB GLN 199 37.084 44.996 61.723 1.00 2.82 ATOM 1997 CG GLN 199 37.874 46.148 62.373 1.00 2.82 ATOM 1998 CD GLN 199 37.044 47.414 62.607 1.00 2.82 ATOM 1999 OE1 GLN 199 35.842 47.482 62.384 1.00 2.82 ATOM 2000 NE2 GLN 199 37.664 48.485 63.060 1.00 2.82 ATOM 2001 N LEU 200 39.999 43.565 62.610 1.00 2.40 ATOM 2002 CA LEU 200 40.850 43.175 63.734 1.00 2.40 ATOM 2003 C LEU 200 42.002 44.172 63.970 1.00 2.40 ATOM 2004 O LEU 200 42.150 45.151 63.237 1.00 2.40 ATOM 2005 CB LEU 200 41.325 41.722 63.558 1.00 2.46 ATOM 2006 CG LEU 200 42.057 41.408 62.244 1.00 2.46 ATOM 2007 CD1 LEU 200 43.550 41.733 62.296 1.00 2.46 ATOM 2008 CD2 LEU 200 41.876 39.925 61.991 1.00 2.46 ATOM 2009 N GLY 201 42.808 43.917 65.008 1.00 2.76 ATOM 2010 CA GLY 201 44.011 44.693 65.324 1.00 2.76 ATOM 2011 C GLY 201 45.190 44.285 64.443 1.00 2.76 ATOM 2012 O GLY 201 45.388 44.845 63.365 1.00 2.76 ATOM 2013 N ASN 202 45.978 43.306 64.895 1.00 2.90 ATOM 2014 CA ASN 202 47.212 42.884 64.222 1.00 2.90 ATOM 2015 C ASN 202 47.034 41.689 63.267 1.00 2.90 ATOM 2016 O ASN 202 47.145 41.853 62.052 1.00 2.90 ATOM 2017 CB ASN 202 48.302 42.611 65.278 1.00 3.25 ATOM 2018 CG ASN 202 48.789 43.865 65.989 1.00 3.25 ATOM 2019 OD1 ASN 202 48.995 44.914 65.393 1.00 3.25 ATOM 2020 ND2 ASN 202 48.999 43.800 67.287 1.00 3.25 ATOM 2021 N ASP 203 46.775 40.498 63.817 1.00 2.68 ATOM 2022 CA ASP 203 46.873 39.218 63.101 1.00 2.68 ATOM 2023 C ASP 203 45.580 38.743 62.408 1.00 2.68 ATOM 2024 O ASP 203 44.619 38.357 63.083 1.00 2.68 ATOM 2025 CB ASP 203 47.351 38.124 64.081 1.00 2.73 ATOM 2026 CG ASP 203 48.592 38.472 64.925 1.00 2.73 ATOM 2027 OD1 ASP 203 49.491 39.207 64.455 1.00 2.73 ATOM 2028 OD2 ASP 203 48.686 37.976 66.076 1.00 2.73 ATOM 2029 N TYR 204 45.578 38.693 61.069 1.00 2.47 ATOM 2030 CA TYR 204 44.540 38.013 60.281 1.00 2.47 ATOM 2031 C TYR 204 45.075 36.700 59.706 1.00 2.47 ATOM 2032 O TYR 204 46.123 36.681 59.052 1.00 2.47 ATOM 2033 CB TYR 204 44.019 38.884 59.126 1.00 3.09 ATOM 2034 CG TYR 204 42.789 38.343 58.394 1.00 3.09 ATOM 2035 CD1 TYR 204 41.693 37.790 59.097 1.00 3.09 ATOM 2036 CD2 TYR 204 42.722 38.432 56.988 1.00 3.09 ATOM 2037 CE1 TYR 204 40.538 37.366 58.410 1.00 3.09 ATOM 2038 CE2 TYR 204 41.571 38.003 56.297 1.00 3.09 ATOM 2039 CZ TYR 204 40.468 37.485 57.006 1.00 3.09 ATOM 2040 OH TYR 204 39.340 37.127 56.331 1.00 3.09 ATOM 2041 N ALA 205 44.325 35.616 59.890 1.00 2.47 ATOM 2042 CA ALA 205 44.598 34.324 59.284 1.00 2.47 ATOM 2043 C ALA 205 43.322 33.648 58.736 1.00 2.47 ATOM 2044 O ALA 205 42.196 33.957 59.139 1.00 2.47 ATOM 2045 CB ALA 205 45.393 33.463 60.270 1.00 2.51 ATOM 2046 N GLY 206 43.495 32.714 57.804 1.00 2.39 ATOM 2047 CA GLY 206 42.420 31.934 57.197 1.00 2.39 ATOM 2048 C GLY 206 42.977 30.693 56.507 1.00 2.39 ATOM 2049 O GLY 206 43.379 30.740 55.345 1.00 2.39 ATOM 2050 N ASN 207 42.998 29.581 57.238 1.00 2.67 ATOM 2051 CA ASN 207 43.690 28.348 56.870 1.00 2.67 ATOM 2052 C ASN 207 42.734 27.199 56.463 1.00 2.67 ATOM 2053 O ASN 207 43.144 26.035 56.404 1.00 2.67 ATOM 2054 CB ASN 207 44.681 27.982 57.995 1.00 3.02 ATOM 2055 CG ASN 207 45.800 28.999 58.248 1.00 3.02 ATOM 2056 OD1 ASN 207 45.769 30.166 57.880 1.00 3.02 ATOM 2057 ND2 ASN 207 46.848 28.578 58.924 1.00 3.02 ATOM 2058 N GLY 208 41.455 27.504 56.195 1.00 2.54 ATOM 2059 CA GLY 208 40.452 26.535 55.737 1.00 2.54 ATOM 2060 C GLY 208 39.086 27.146 55.393 1.00 2.54 ATOM 2061 O GLY 208 38.785 28.280 55.775 1.00 2.54 ATOM 2062 N GLY 209 38.256 26.369 54.690 1.00 2.38 ATOM 2063 CA GLY 209 36.864 26.701 54.352 1.00 2.38 ATOM 2064 C GLY 209 36.647 27.356 52.984 1.00 2.38 ATOM 2065 O GLY 209 37.584 27.643 52.239 1.00 2.38 ATOM 2066 N ASP 210 35.372 27.583 52.661 1.00 2.45 ATOM 2067 CA ASP 210 34.886 28.199 51.419 1.00 2.45 ATOM 2068 C ASP 210 33.836 29.262 51.786 1.00 2.45 ATOM 2069 O ASP 210 32.717 28.916 52.176 1.00 2.45 ATOM 2070 CB ASP 210 34.335 27.100 50.498 1.00 2.81 ATOM 2071 CG ASP 210 33.793 27.609 49.148 1.00 2.81 ATOM 2072 OD1 ASP 210 33.960 28.804 48.807 1.00 2.81 ATOM 2073 OD2 ASP 210 33.217 26.784 48.398 1.00 2.81 ATOM 2074 N VAL 211 34.214 30.547 51.741 1.00 2.25 ATOM 2075 CA VAL 211 33.404 31.642 52.313 1.00 2.25 ATOM 2076 C VAL 211 32.886 32.642 51.272 1.00 2.25 ATOM 2077 O VAL 211 33.637 33.088 50.401 1.00 2.25 ATOM 2078 CB VAL 211 34.098 32.313 53.521 1.00 2.19 ATOM 2079 CG1 VAL 211 34.760 31.286 54.451 1.00 2.19 ATOM 2080 CG2 VAL 211 35.159 33.347 53.143 1.00 2.19 ATOM 2081 N GLY 212 31.602 33.005 51.383 1.00 2.43 ATOM 2082 CA GLY 212 30.900 33.996 50.551 1.00 2.43 ATOM 2083 C GLY 212 30.936 35.419 51.130 1.00 2.43 ATOM 2084 O GLY 212 30.785 35.603 52.338 1.00 2.43 ATOM 2085 N ASN 213 31.124 36.426 50.265 1.00 2.52 ATOM 2086 CA ASN 213 31.433 37.818 50.640 1.00 2.52 ATOM 2087 C ASN 213 30.750 38.879 49.730 1.00 2.52 ATOM 2088 O ASN 213 31.439 39.580 48.980 1.00 2.52 ATOM 2089 CB ASN 213 32.972 37.980 50.630 1.00 2.65 ATOM 2090 CG ASN 213 33.749 36.954 51.436 1.00 2.65 ATOM 2091 OD1 ASN 213 33.982 37.079 52.626 1.00 2.65 ATOM 2092 ND2 ASN 213 34.203 35.914 50.784 1.00 2.65 ATOM 2093 N PRO 214 29.410 39.019 49.739 1.00 2.88 ATOM 2094 CA PRO 214 28.708 40.071 48.987 1.00 2.88 ATOM 2095 C PRO 214 29.128 41.491 49.419 1.00 2.88 ATOM 2096 O PRO 214 29.361 41.739 50.602 1.00 2.88 ATOM 2097 CB PRO 214 27.216 39.816 49.236 1.00 2.79 ATOM 2098 CG PRO 214 27.196 39.080 50.577 1.00 2.79 ATOM 2099 CD PRO 214 28.460 38.230 50.510 1.00 2.79 ATOM 2100 N GLY 215 29.201 42.434 48.473 1.00 3.22 ATOM 2101 CA GLY 215 29.620 43.830 48.709 1.00 3.22 ATOM 2102 C GLY 215 28.532 44.740 49.303 1.00 3.22 ATOM 2103 O GLY 215 27.402 44.306 49.539 1.00 3.22 ATOM 2104 N SER 216 28.872 46.013 49.546 1.00 3.46 ATOM 2105 CA SER 216 27.945 47.053 50.043 1.00 3.46 ATOM 2106 C SER 216 26.712 47.196 49.134 1.00 3.46 ATOM 2107 O SER 216 26.837 47.137 47.904 1.00 3.46 ATOM 2108 CB SER 216 28.664 48.405 50.162 1.00 3.60 ATOM 2109 OG SER 216 29.822 48.285 50.978 1.00 3.60 ATOM 2110 N ALA 217 25.525 47.396 49.721 1.00 3.79 ATOM 2111 CA ALA 217 24.244 47.278 49.010 1.00 3.79 ATOM 2112 C ALA 217 23.145 48.281 49.442 1.00 3.79 ATOM 2113 O ALA 217 23.311 49.056 50.390 1.00 3.79 ATOM 2114 CB ALA 217 23.792 45.823 49.189 1.00 3.74 ATOM 2115 N SER 218 22.029 48.273 48.700 1.00 4.28 ATOM 2116 CA SER 218 20.880 49.192 48.832 1.00 4.28 ATOM 2117 C SER 218 19.872 48.796 49.933 1.00 4.28 ATOM 2118 O SER 218 20.080 47.840 50.686 1.00 4.28 ATOM 2119 CB SER 218 20.188 49.326 47.463 1.00 4.40 ATOM 2120 OG SER 218 19.336 48.223 47.173 1.00 4.40 ATOM 2121 N SER 219 18.755 49.531 50.031 1.00 4.56 ATOM 2122 CA SER 219 17.714 49.391 51.068 1.00 4.56 ATOM 2123 C SER 219 17.036 48.011 51.131 1.00 4.56 ATOM 2124 O SER 219 16.570 47.609 52.199 1.00 4.56 ATOM 2125 CB SER 219 16.623 50.448 50.846 1.00 4.82 ATOM 2126 OG SER 219 17.187 51.749 50.720 1.00 4.82 ATOM 2127 N ALA 220 16.992 47.256 50.026 1.00 4.43 ATOM 2128 CA ALA 220 16.486 45.876 50.013 1.00 4.43 ATOM 2129 C ALA 220 17.419 44.884 50.748 1.00 4.43 ATOM 2130 O ALA 220 16.979 43.823 51.197 1.00 4.43 ATOM 2131 CB ALA 220 16.260 45.459 48.556 1.00 4.45 ATOM 2132 N GLU 221 18.695 45.245 50.914 1.00 3.86 ATOM 2133 CA GLU 221 19.729 44.518 51.660 1.00 3.86 ATOM 2134 C GLU 221 20.144 45.265 52.954 1.00 3.86 ATOM 2135 O GLU 221 21.282 45.166 53.416 1.00 3.86 ATOM 2136 CB GLU 221 20.927 44.213 50.741 1.00 4.01 ATOM 2137 CG GLU 221 20.618 43.287 49.551 1.00 4.01 ATOM 2138 CD GLU 221 19.925 43.964 48.347 1.00 4.01 ATOM 2139 OE1 GLU 221 20.251 45.124 47.993 1.00 4.01 ATOM 2140 OE2 GLU 221 19.080 43.298 47.698 1.00 4.01 ATOM 2141 N MET 222 19.216 46.028 53.550 1.00 3.86 ATOM 2142 CA MET 222 19.421 46.753 54.818 1.00 3.86 ATOM 2143 C MET 222 19.506 45.817 56.045 1.00 3.86 ATOM 2144 O MET 222 20.059 46.201 57.079 1.00 3.86 ATOM 2145 CB MET 222 18.290 47.788 54.962 1.00 4.43 ATOM 2146 CG MET 222 18.337 48.728 56.179 1.00 4.43 ATOM 2147 SD MET 222 19.409 50.194 56.048 1.00 4.43 ATOM 2148 CE MET 222 21.060 49.508 56.362 1.00 4.43 ATOM 2149 N GLY 223 18.979 44.587 55.940 1.00 3.56 ATOM 2150 CA GLY 223 19.015 43.574 57.003 1.00 3.56 ATOM 2151 C GLY 223 20.438 43.262 57.484 1.00 3.56 ATOM 2152 O GLY 223 21.379 43.216 56.691 1.00 3.56 ATOM 2153 N GLY 224 20.596 43.019 58.790 1.00 3.03 ATOM 2154 CA GLY 224 21.905 42.930 59.458 1.00 3.03 ATOM 2155 C GLY 224 22.853 41.851 58.928 1.00 3.03 ATOM 2156 O GLY 224 24.062 41.997 59.079 1.00 3.03 ATOM 2157 N GLY 225 22.328 40.798 58.292 1.00 2.79 ATOM 2158 CA GLY 225 23.101 39.727 57.649 1.00 2.79 ATOM 2159 C GLY 225 22.978 39.647 56.120 1.00 2.79 ATOM 2160 O GLY 225 23.396 38.646 55.538 1.00 2.79 ATOM 2161 N ALA 226 22.364 40.641 55.466 1.00 3.15 ATOM 2162 CA ALA 226 22.005 40.567 54.048 1.00 3.15 ATOM 2163 C ALA 226 23.205 40.705 53.086 1.00 3.15 ATOM 2164 O ALA 226 23.370 39.874 52.188 1.00 3.15 ATOM 2165 CB ALA 226 20.943 41.633 53.764 1.00 3.28 ATOM 2166 N ALA 227 24.029 41.747 53.251 1.00 3.04 ATOM 2167 CA ALA 227 25.125 42.087 52.338 1.00 3.04 ATOM 2168 C ALA 227 26.185 43.005 52.984 1.00 3.04 ATOM 2169 O ALA 227 25.895 43.735 53.932 1.00 3.04 ATOM 2170 CB ALA 227 24.533 42.760 51.092 1.00 3.10 ATOM 2171 N GLY 228 27.404 42.984 52.434 1.00 2.92 ATOM 2172 CA GLY 228 28.543 43.818 52.833 1.00 2.92 ATOM 2173 C GLY 228 29.720 43.002 53.383 1.00 2.92 ATOM 2174 O GLY 228 29.552 42.137 54.247 1.00 2.92 TER END