####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name S0953s2TS208_2-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name S0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap S0953s2TS208_2-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 21 22 - 42 5.00 15.21 LCS_AVERAGE: 40.08 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 13 - 20 1.85 25.55 LCS_AVERAGE: 13.27 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 5 13 - 17 0.60 27.92 LONGEST_CONTINUOUS_SEGMENT: 5 34 - 38 0.88 17.44 LCS_AVERAGE: 8.63 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 6 8 0 4 5 5 9 10 11 12 13 15 18 19 22 23 25 26 27 29 31 32 LCS_GDT V 3 V 3 4 6 8 1 4 5 6 9 10 11 12 13 15 18 19 22 23 25 26 27 29 31 32 LCS_GDT Q 4 Q 4 4 6 8 2 4 5 5 9 10 11 12 13 14 17 18 22 23 25 26 27 29 31 32 LCS_GDT G 5 G 5 4 6 10 2 3 5 5 6 6 9 9 12 13 15 17 19 21 23 26 27 29 31 32 LCS_GDT P 6 P 6 4 6 16 0 3 5 5 6 7 7 7 9 11 13 16 18 21 23 26 27 29 31 32 LCS_GDT W 7 W 7 3 6 16 0 3 4 4 5 7 7 7 9 10 11 15 18 21 23 26 27 29 31 32 LCS_GDT V 8 V 8 3 4 16 3 3 4 4 4 7 7 8 10 11 13 15 18 21 23 26 27 29 31 32 LCS_GDT G 9 G 9 3 4 16 3 3 4 4 5 7 8 10 11 13 14 14 17 21 23 26 27 29 31 32 LCS_GDT S 10 S 10 4 5 16 3 3 4 5 5 7 8 10 11 13 14 14 17 18 19 21 24 27 30 30 LCS_GDT S 11 S 11 4 5 16 3 3 4 5 6 8 8 10 11 13 14 14 14 15 17 17 20 22 24 26 LCS_GDT Y 12 Y 12 4 5 16 3 3 4 5 5 5 7 10 11 13 14 14 14 15 17 17 20 21 21 24 LCS_GDT V 13 V 13 5 8 16 4 4 5 5 7 8 9 10 11 13 14 14 15 15 17 19 20 22 24 26 LCS_GDT A 14 A 14 5 8 16 3 4 5 6 7 8 9 10 11 13 14 14 14 15 17 17 20 22 22 25 LCS_GDT E 15 E 15 5 8 16 4 4 5 6 7 8 9 10 11 13 14 14 14 15 17 17 20 21 21 24 LCS_GDT T 16 T 16 5 8 16 4 4 5 6 7 8 9 10 11 13 14 14 15 15 17 19 20 22 23 26 LCS_GDT G 17 G 17 5 8 16 4 4 5 6 7 8 9 10 11 13 14 14 15 16 18 20 21 22 24 26 LCS_GDT Q 18 Q 18 3 8 16 3 4 4 6 7 8 9 10 11 13 14 14 17 19 19 22 24 27 30 30 LCS_GDT N 19 N 19 4 8 16 4 4 4 6 7 8 8 10 11 13 14 16 18 21 23 26 27 29 31 32 LCS_GDT W 20 W 20 4 8 18 4 4 4 6 6 8 9 11 13 14 17 18 22 23 25 26 27 29 31 32 LCS_GDT A 21 A 21 4 5 20 4 4 4 5 6 10 11 12 13 14 17 18 22 23 25 26 27 29 31 32 LCS_GDT S 22 S 22 4 5 21 4 4 4 5 9 10 11 12 13 15 18 19 22 23 25 26 27 29 31 32 LCS_GDT L 23 L 23 3 3 21 3 3 3 4 5 7 8 9 12 15 18 19 22 23 25 26 27 29 31 32 LCS_GDT A 24 A 24 3 3 21 3 3 4 5 9 10 11 12 13 15 18 19 22 23 25 26 27 29 31 32 LCS_GDT A 25 A 25 3 5 21 3 3 4 4 5 5 7 8 10 14 18 19 22 23 25 26 27 29 31 32 LCS_GDT N 26 N 26 3 5 21 3 3 4 4 4 5 5 7 9 12 16 17 20 22 24 25 27 29 31 32 LCS_GDT E 27 E 27 3 5 21 3 3 4 4 5 7 9 9 11 13 15 17 20 23 25 26 27 29 31 32 LCS_GDT L 28 L 28 3 6 21 3 3 4 5 9 10 11 12 13 15 18 19 22 23 25 26 27 29 31 32 LCS_GDT R 29 R 29 4 6 21 3 4 4 5 9 10 11 12 13 15 18 19 22 23 25 26 27 29 31 32 LCS_GDT V 30 V 30 4 6 21 3 4 4 5 9 10 11 12 13 15 18 19 22 23 25 26 27 29 31 32 LCS_GDT T 31 T 31 4 6 21 3 4 4 5 9 10 11 12 13 15 18 19 22 23 25 26 27 29 31 32 LCS_GDT E 32 E 32 4 7 21 3 4 4 5 6 9 9 12 12 14 15 18 22 22 25 25 26 28 31 32 LCS_GDT R 33 R 33 3 7 21 3 4 5 6 7 10 11 12 13 15 18 19 22 23 25 26 27 29 31 32 LCS_GDT P 34 P 34 5 7 21 3 4 5 6 7 9 9 12 13 15 18 19 22 23 25 26 27 29 31 32 LCS_GDT F 35 F 35 5 7 21 3 4 5 6 7 9 10 12 13 15 18 19 22 23 25 26 27 29 31 32 LCS_GDT W 36 W 36 5 7 21 3 4 5 6 7 9 9 10 12 15 18 19 22 23 25 26 27 29 31 32 LCS_GDT I 37 I 37 5 7 21 3 4 5 6 7 9 9 10 12 15 18 19 22 23 25 26 27 29 31 32 LCS_GDT S 38 S 38 5 7 21 3 4 5 6 7 9 9 10 12 14 18 19 22 23 25 25 26 28 31 32 LCS_GDT S 39 S 39 3 6 21 3 3 4 4 5 6 8 9 12 15 18 19 22 23 25 26 27 29 31 32 LCS_GDT F 40 F 40 3 5 21 3 3 4 4 5 6 8 9 10 13 16 19 20 23 25 25 27 29 31 32 LCS_GDT I 41 I 41 3 4 21 3 3 3 4 4 6 8 9 10 13 18 19 22 23 25 25 27 29 31 32 LCS_GDT G 42 G 42 3 4 21 3 3 3 4 4 6 8 9 10 12 16 18 20 23 25 25 27 28 31 32 LCS_GDT R 43 R 43 3 4 13 3 3 3 4 4 6 6 8 9 10 10 11 14 15 15 16 19 20 22 24 LCS_GDT S 44 S 44 3 4 13 3 3 3 4 4 6 8 9 9 10 11 11 14 15 15 16 19 20 21 24 LCS_GDT K 45 K 45 3 3 13 0 3 3 3 4 6 8 9 9 10 11 11 12 15 15 16 19 20 23 24 LCS_AVERAGE LCS_A: 20.66 ( 8.63 13.27 40.08 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 4 5 6 9 10 11 12 13 15 18 19 22 23 25 26 27 29 31 32 GDT PERCENT_AT 9.09 9.09 11.36 13.64 20.45 22.73 25.00 27.27 29.55 34.09 40.91 43.18 50.00 52.27 56.82 59.09 61.36 65.91 70.45 72.73 GDT RMS_LOCAL 0.24 0.24 0.60 1.15 1.88 2.18 2.45 2.78 3.04 3.74 4.11 4.26 4.71 4.90 5.18 5.91 5.90 6.36 6.51 6.66 GDT RMS_ALL_AT 27.54 27.54 27.92 16.11 14.52 13.93 13.42 13.18 12.90 13.88 14.29 14.43 13.27 13.33 13.48 11.65 12.75 11.80 12.23 11.99 # Checking swapping # possible swapping detected: E 15 E 15 # possible swapping detected: E 27 E 27 # possible swapping detected: E 32 E 32 # possible swapping detected: F 35 F 35 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 1.686 0 0.235 0.332 2.362 51.364 54.182 - LGA V 3 V 3 1.321 0 0.069 1.102 4.677 65.455 52.208 4.677 LGA Q 4 Q 4 2.623 0 0.194 0.390 3.918 25.000 21.616 3.918 LGA G 5 G 5 6.516 0 0.126 0.126 8.289 0.455 0.455 - LGA P 6 P 6 8.601 0 0.666 0.594 10.023 0.000 0.000 9.755 LGA W 7 W 7 10.672 0 0.392 1.180 16.484 0.000 0.000 14.826 LGA V 8 V 8 10.661 0 0.637 0.706 11.446 0.000 0.000 10.600 LGA G 9 G 9 13.121 0 0.565 0.565 15.290 0.000 0.000 - LGA S 10 S 10 18.283 0 0.629 0.847 21.657 0.000 0.000 20.608 LGA S 11 S 11 22.432 0 0.588 0.570 24.385 0.000 0.000 24.385 LGA Y 12 Y 12 23.914 0 0.077 1.208 25.685 0.000 0.000 19.389 LGA V 13 V 13 23.456 0 0.441 0.957 25.239 0.000 0.000 21.307 LGA A 14 A 14 29.052 0 0.124 0.122 31.103 0.000 0.000 - LGA E 15 E 15 29.974 0 0.062 1.647 32.610 0.000 0.000 31.927 LGA T 16 T 16 23.419 0 0.320 0.265 25.581 0.000 0.000 20.883 LGA G 17 G 17 22.927 0 0.163 0.163 23.297 0.000 0.000 - LGA Q 18 Q 18 16.511 0 0.451 0.473 18.888 0.000 0.000 15.910 LGA N 19 N 19 12.955 0 0.066 1.231 14.611 0.000 0.000 14.611 LGA W 20 W 20 6.944 0 0.170 0.230 15.010 0.909 0.260 14.597 LGA A 21 A 21 2.520 0 0.494 0.452 3.402 30.909 30.182 - LGA S 22 S 22 2.396 0 0.522 0.810 4.753 35.909 27.273 4.753 LGA L 23 L 23 5.377 0 0.631 1.457 12.092 4.091 2.045 9.608 LGA A 24 A 24 2.867 0 0.605 0.582 4.682 13.182 11.636 - LGA A 25 A 25 6.855 0 0.570 0.577 7.627 0.000 0.000 - LGA N 26 N 26 9.828 0 0.620 0.775 17.043 0.000 0.000 14.426 LGA E 27 E 27 7.191 0 0.096 1.033 12.715 0.000 0.000 12.715 LGA L 28 L 28 2.866 0 0.611 0.556 5.404 33.636 25.227 3.102 LGA R 29 R 29 2.665 0 0.497 1.437 4.565 23.182 18.017 4.565 LGA V 30 V 30 3.371 0 0.093 0.137 5.509 27.727 16.623 5.509 LGA T 31 T 31 2.392 0 0.666 0.596 2.900 32.727 38.701 2.395 LGA E 32 E 32 5.223 0 0.674 1.376 12.602 1.818 0.808 11.362 LGA R 33 R 33 2.643 0 0.624 1.103 12.113 30.000 11.074 12.113 LGA P 34 P 34 5.934 0 0.025 0.065 9.149 3.636 2.078 9.149 LGA F 35 F 35 4.664 0 0.101 1.116 8.096 0.455 4.298 5.841 LGA W 36 W 36 9.543 0 0.030 0.915 20.166 0.000 0.000 20.166 LGA I 37 I 37 10.013 0 0.345 1.407 13.245 0.000 0.000 13.245 LGA S 38 S 38 12.294 0 0.055 0.104 14.064 0.000 0.000 13.619 LGA S 39 S 39 8.893 0 0.648 0.788 10.125 0.000 0.000 10.125 LGA F 40 F 40 10.374 0 0.645 1.191 16.466 0.000 0.000 16.466 LGA I 41 I 41 9.382 0 0.036 0.195 10.106 0.000 0.000 8.730 LGA G 42 G 42 9.618 0 0.657 0.657 10.630 0.000 0.000 - LGA R 43 R 43 14.758 0 0.143 1.021 23.699 0.000 0.000 23.247 LGA S 44 S 44 16.582 0 0.597 0.823 18.498 0.000 0.000 15.612 LGA K 45 K 45 16.791 0 0.124 0.964 20.041 0.000 0.000 20.041 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 10.701 10.581 11.605 8.647 7.197 2.078 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 12 2.78 27.273 24.381 0.416 LGA_LOCAL RMSD: 2.783 Number of atoms: 12 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 13.181 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 10.701 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.539720 * X + 0.640433 * Y + -0.546395 * Z + 1.650424 Y_new = 0.650636 * X + 0.729196 * Y + 0.212007 * Z + 68.676537 Z_new = 0.534205 * X + -0.241080 * Y + -0.810250 * Z + -31.219210 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.263285 -0.563567 -2.852397 [DEG: 129.6767 -32.2900 -163.4303 ] ZXZ: -1.940924 2.515375 1.994720 [DEG: -111.2068 144.1204 114.2890 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: S0953s2TS208_2-D1 REMARK 2: S0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap S0953s2TS208_2-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 12 2.78 24.381 10.70 REMARK ---------------------------------------------------------- MOLECULE S0953s2TS208_2-D1 PFRMAT TS TARGET S0953s2 MODEL 2 REFINED PARENT N/A ATOM 525 N ALA 2 13.356 36.709 13.484 1.00 5.32 ATOM 526 CA ALA 2 11.960 37.157 13.528 1.00 5.32 ATOM 527 C ALA 2 11.122 36.219 12.618 1.00 5.32 ATOM 528 O ALA 2 11.367 35.009 12.627 1.00 5.32 ATOM 529 CB ALA 2 11.939 38.644 13.146 1.00 5.44 ATOM 530 N VAL 3 10.154 36.724 11.834 1.00 4.54 ATOM 531 CA VAL 3 9.266 35.884 10.994 1.00 4.54 ATOM 532 C VAL 3 9.171 36.304 9.523 1.00 4.54 ATOM 533 O VAL 3 9.328 37.469 9.161 1.00 4.54 ATOM 534 CB VAL 3 7.855 35.745 11.604 1.00 4.46 ATOM 535 CG1 VAL 3 7.902 35.230 13.048 1.00 4.46 ATOM 536 CG2 VAL 3 7.043 37.042 11.567 1.00 4.46 ATOM 537 N GLN 4 8.859 35.329 8.669 1.00 4.22 ATOM 538 CA GLN 4 8.493 35.508 7.260 1.00 4.22 ATOM 539 C GLN 4 7.145 34.801 7.047 1.00 4.22 ATOM 540 O GLN 4 7.100 33.572 6.956 1.00 4.22 ATOM 541 CB GLN 4 9.621 34.974 6.356 1.00 4.71 ATOM 542 CG GLN 4 10.935 35.756 6.565 1.00 4.71 ATOM 543 CD GLN 4 11.952 35.623 5.428 1.00 4.71 ATOM 544 OE1 GLN 4 11.739 34.985 4.404 1.00 4.71 ATOM 545 NE2 GLN 4 13.107 36.239 5.567 1.00 4.71 ATOM 546 N GLY 5 6.041 35.563 7.041 1.00 4.08 ATOM 547 CA GLY 5 4.681 35.003 7.111 1.00 4.08 ATOM 548 C GLY 5 3.607 35.728 6.281 1.00 4.08 ATOM 549 O GLY 5 3.648 36.955 6.167 1.00 4.08 ATOM 550 N PRO 6 2.639 34.991 5.694 1.00 3.80 ATOM 551 CA PRO 6 1.425 35.561 5.108 1.00 3.80 ATOM 552 C PRO 6 0.258 35.632 6.108 1.00 3.80 ATOM 553 O PRO 6 0.041 34.705 6.894 1.00 3.80 ATOM 554 CB PRO 6 1.058 34.670 3.910 1.00 4.07 ATOM 555 CG PRO 6 2.262 33.745 3.733 1.00 4.07 ATOM 556 CD PRO 6 2.828 33.656 5.145 1.00 4.07 ATOM 557 N TRP 7 -0.554 36.687 5.998 1.00 3.69 ATOM 558 CA TRP 7 -1.836 36.853 6.693 1.00 3.69 ATOM 559 C TRP 7 -2.942 37.323 5.741 1.00 3.69 ATOM 560 O TRP 7 -2.698 38.025 4.754 1.00 3.69 ATOM 561 CB TRP 7 -1.697 37.797 7.894 1.00 4.04 ATOM 562 CG TRP 7 -0.897 37.247 9.032 1.00 4.04 ATOM 563 CD1 TRP 7 -1.393 36.486 10.035 1.00 4.04 ATOM 564 CD2 TRP 7 0.544 37.318 9.257 1.00 4.04 ATOM 565 NE1 TRP 7 -0.365 36.071 10.857 1.00 4.04 ATOM 566 CE2 TRP 7 0.851 36.535 10.411 1.00 4.04 ATOM 567 CE3 TRP 7 1.627 37.947 8.603 1.00 4.04 ATOM 568 CZ2 TRP 7 2.162 36.352 10.869 1.00 4.04 ATOM 569 CZ3 TRP 7 2.946 37.790 9.072 1.00 4.04 ATOM 570 CH2 TRP 7 3.217 36.982 10.191 1.00 4.04 ATOM 571 N VAL 8 -4.178 36.910 6.038 1.00 3.75 ATOM 572 CA VAL 8 -5.360 37.158 5.200 1.00 3.75 ATOM 573 C VAL 8 -6.577 37.438 6.079 1.00 3.75 ATOM 574 O VAL 8 -6.947 36.610 6.911 1.00 3.75 ATOM 575 CB VAL 8 -5.659 35.973 4.245 1.00 4.00 ATOM 576 CG1 VAL 8 -6.732 36.346 3.214 1.00 4.00 ATOM 577 CG2 VAL 8 -4.418 35.451 3.504 1.00 4.00 ATOM 578 N GLY 9 -7.220 38.589 5.893 1.00 3.71 ATOM 579 CA GLY 9 -8.533 38.877 6.480 1.00 3.71 ATOM 580 C GLY 9 -9.596 38.634 5.411 1.00 3.71 ATOM 581 O GLY 9 -9.532 39.246 4.349 1.00 3.71 ATOM 582 N SER 10 -10.529 37.700 5.615 1.00 4.30 ATOM 583 CA SER 10 -11.430 37.274 4.529 1.00 4.30 ATOM 584 C SER 10 -12.384 38.399 4.087 1.00 4.30 ATOM 585 O SER 10 -13.084 39.001 4.908 1.00 4.30 ATOM 586 CB SER 10 -12.191 36.005 4.918 1.00 4.54 ATOM 587 OG SER 10 -12.932 35.510 3.814 1.00 4.54 ATOM 588 N SER 11 -12.395 38.696 2.784 1.00 4.15 ATOM 589 CA SER 11 -13.235 39.738 2.171 1.00 4.15 ATOM 590 C SER 11 -14.711 39.311 2.063 1.00 4.15 ATOM 591 O SER 11 -15.022 38.118 2.031 1.00 4.15 ATOM 592 CB SER 11 -12.647 40.117 0.803 1.00 4.16 ATOM 593 OG SER 11 -13.324 41.214 0.211 1.00 4.16 ATOM 594 N TYR 12 -15.622 40.290 1.997 1.00 4.78 ATOM 595 CA TYR 12 -17.087 40.172 1.825 1.00 4.78 ATOM 596 C TYR 12 -17.887 39.449 2.932 1.00 4.78 ATOM 597 O TYR 12 -19.080 39.721 3.082 1.00 4.78 ATOM 598 CB TYR 12 -17.430 39.542 0.461 1.00 5.21 ATOM 599 CG TYR 12 -16.645 40.031 -0.745 1.00 5.21 ATOM 600 CD1 TYR 12 -15.822 39.132 -1.455 1.00 5.21 ATOM 601 CD2 TYR 12 -16.775 41.362 -1.188 1.00 5.21 ATOM 602 CE1 TYR 12 -15.144 39.556 -2.616 1.00 5.21 ATOM 603 CE2 TYR 12 -16.094 41.791 -2.344 1.00 5.21 ATOM 604 CZ TYR 12 -15.284 40.887 -3.068 1.00 5.21 ATOM 605 OH TYR 12 -14.654 41.303 -4.202 1.00 5.21 ATOM 606 N VAL 13 -17.274 38.541 3.700 1.00 5.09 ATOM 607 CA VAL 13 -17.923 37.610 4.651 1.00 5.09 ATOM 608 C VAL 13 -18.344 38.266 5.987 1.00 5.09 ATOM 609 O VAL 13 -18.112 37.749 7.079 1.00 5.09 ATOM 610 CB VAL 13 -17.068 36.325 4.767 1.00 5.14 ATOM 611 CG1 VAL 13 -15.756 36.497 5.541 1.00 5.14 ATOM 612 CG2 VAL 13 -17.845 35.134 5.334 1.00 5.14 ATOM 613 N ALA 14 -18.953 39.452 5.916 1.00 5.11 ATOM 614 CA ALA 14 -19.293 40.304 7.058 1.00 5.11 ATOM 615 C ALA 14 -20.263 39.664 8.081 1.00 5.11 ATOM 616 O ALA 14 -20.321 40.114 9.228 1.00 5.11 ATOM 617 CB ALA 14 -19.853 41.619 6.505 1.00 5.11 ATOM 618 N GLU 15 -20.982 38.595 7.718 1.00 5.80 ATOM 619 CA GLU 15 -21.787 37.782 8.643 1.00 5.80 ATOM 620 C GLU 15 -20.941 37.088 9.738 1.00 5.80 ATOM 621 O GLU 15 -21.452 36.801 10.825 1.00 5.80 ATOM 622 CB GLU 15 -22.628 36.758 7.851 1.00 6.16 ATOM 623 CG GLU 15 -21.859 35.676 7.064 1.00 6.16 ATOM 624 CD GLU 15 -21.585 36.042 5.588 1.00 6.16 ATOM 625 OE1 GLU 15 -21.300 37.223 5.275 1.00 6.16 ATOM 626 OE2 GLU 15 -21.644 35.132 4.724 1.00 6.16 ATOM 627 N THR 16 -19.647 36.868 9.477 1.00 5.64 ATOM 628 CA THR 16 -18.632 36.284 10.379 1.00 5.64 ATOM 629 C THR 16 -17.272 36.978 10.155 1.00 5.64 ATOM 630 O THR 16 -16.222 36.341 10.047 1.00 5.64 ATOM 631 CB THR 16 -18.540 34.746 10.230 1.00 5.73 ATOM 632 OG1 THR 16 -18.319 34.354 8.886 1.00 5.73 ATOM 633 CG2 THR 16 -19.798 34.018 10.713 1.00 5.73 ATOM 634 N GLY 17 -17.293 38.319 10.088 1.00 5.01 ATOM 635 CA GLY 17 -16.176 39.173 9.643 1.00 5.01 ATOM 636 C GLY 17 -14.850 39.048 10.409 1.00 5.01 ATOM 637 O GLY 17 -13.790 39.302 9.830 1.00 5.01 ATOM 638 N GLN 18 -14.866 38.601 11.667 1.00 4.84 ATOM 639 CA GLN 18 -13.674 38.302 12.485 1.00 4.84 ATOM 640 C GLN 18 -13.013 36.953 12.099 1.00 4.84 ATOM 641 O GLN 18 -12.666 36.141 12.962 1.00 4.84 ATOM 642 CB GLN 18 -14.044 38.379 13.983 1.00 5.07 ATOM 643 CG GLN 18 -14.499 39.774 14.456 1.00 5.07 ATOM 644 CD GLN 18 -13.382 40.823 14.517 1.00 5.07 ATOM 645 OE1 GLN 18 -12.195 40.543 14.414 1.00 5.07 ATOM 646 NE2 GLN 18 -13.715 42.082 14.703 1.00 5.07 ATOM 647 N ASN 19 -12.874 36.674 10.796 1.00 4.91 ATOM 648 CA ASN 19 -12.468 35.363 10.276 1.00 4.91 ATOM 649 C ASN 19 -10.967 35.055 10.475 1.00 4.91 ATOM 650 O ASN 19 -10.641 33.950 10.906 1.00 4.91 ATOM 651 CB ASN 19 -12.876 35.275 8.794 1.00 5.19 ATOM 652 CG ASN 19 -12.768 33.850 8.268 1.00 5.19 ATOM 653 OD1 ASN 19 -13.652 33.026 8.458 1.00 5.19 ATOM 654 ND2 ASN 19 -11.688 33.502 7.603 1.00 5.19 ATOM 655 N TRP 20 -10.092 36.023 10.149 1.00 4.37 ATOM 656 CA TRP 20 -8.619 36.043 10.301 1.00 4.37 ATOM 657 C TRP 20 -7.863 34.713 10.061 1.00 4.37 ATOM 658 O TRP 20 -7.844 33.823 10.917 1.00 4.37 ATOM 659 CB TRP 20 -8.250 36.592 11.690 1.00 3.85 ATOM 660 CG TRP 20 -8.715 37.974 12.037 1.00 3.85 ATOM 661 CD1 TRP 20 -9.789 38.255 12.809 1.00 3.85 ATOM 662 CD2 TRP 20 -8.089 39.266 11.743 1.00 3.85 ATOM 663 NE1 TRP 20 -9.882 39.616 13.006 1.00 3.85 ATOM 664 CE2 TRP 20 -8.832 40.286 12.416 1.00 3.85 ATOM 665 CE3 TRP 20 -6.933 39.677 11.038 1.00 3.85 ATOM 666 CZ2 TRP 20 -8.436 41.630 12.420 1.00 3.85 ATOM 667 CZ3 TRP 20 -6.528 41.028 11.037 1.00 3.85 ATOM 668 CH2 TRP 20 -7.265 41.998 11.739 1.00 3.85 ATOM 669 N ALA 21 -7.121 34.610 8.950 1.00 4.57 ATOM 670 CA ALA 21 -6.152 33.532 8.701 1.00 4.57 ATOM 671 C ALA 21 -4.882 33.755 9.562 1.00 4.57 ATOM 672 O ALA 21 -3.814 34.125 9.068 1.00 4.57 ATOM 673 CB ALA 21 -5.864 33.451 7.196 1.00 4.57 ATOM 674 N SER 22 -5.040 33.614 10.880 1.00 4.59 ATOM 675 CA SER 22 -4.072 33.984 11.918 1.00 4.59 ATOM 676 C SER 22 -2.936 32.959 12.067 1.00 4.59 ATOM 677 O SER 22 -2.902 32.165 13.012 1.00 4.59 ATOM 678 CB SER 22 -4.827 34.248 13.230 1.00 4.77 ATOM 679 OG SER 22 -3.981 34.832 14.211 1.00 4.77 ATOM 680 N LEU 23 -1.994 32.972 11.118 1.00 4.81 ATOM 681 CA LEU 23 -0.728 32.234 11.197 1.00 4.81 ATOM 682 C LEU 23 0.054 32.651 12.462 1.00 4.81 ATOM 683 O LEU 23 0.225 33.845 12.725 1.00 4.81 ATOM 684 CB LEU 23 0.062 32.489 9.896 1.00 4.82 ATOM 685 CG LEU 23 1.524 31.999 9.889 1.00 4.82 ATOM 686 CD1 LEU 23 1.635 30.477 10.009 1.00 4.82 ATOM 687 CD2 LEU 23 2.202 32.417 8.585 1.00 4.82 ATOM 688 N ALA 24 0.523 31.672 13.242 1.00 5.17 ATOM 689 CA ALA 24 1.294 31.904 14.466 1.00 5.17 ATOM 690 C ALA 24 2.670 32.545 14.183 1.00 5.17 ATOM 691 O ALA 24 3.328 32.218 13.189 1.00 5.17 ATOM 692 CB ALA 24 1.438 30.576 15.222 1.00 5.30 ATOM 693 N ALA 25 3.115 33.438 15.074 1.00 4.84 ATOM 694 CA ALA 25 4.364 34.192 14.935 1.00 4.84 ATOM 695 C ALA 25 4.935 34.684 16.278 1.00 4.84 ATOM 696 O ALA 25 4.209 34.894 17.255 1.00 4.84 ATOM 697 CB ALA 25 4.110 35.377 13.991 1.00 4.73 ATOM 698 N ASN 26 6.250 34.921 16.297 1.00 4.92 ATOM 699 CA ASN 26 6.954 35.582 17.395 1.00 4.92 ATOM 700 C ASN 26 6.509 37.058 17.506 1.00 4.92 ATOM 701 O ASN 26 6.514 37.780 16.510 1.00 4.92 ATOM 702 CB ASN 26 8.469 35.436 17.142 1.00 5.10 ATOM 703 CG ASN 26 9.334 35.835 18.329 1.00 5.10 ATOM 704 OD1 ASN 26 8.883 35.951 19.460 1.00 5.10 ATOM 705 ND2 ASN 26 10.614 36.044 18.112 1.00 5.10 ATOM 706 N GLU 27 6.125 37.495 18.711 1.00 4.52 ATOM 707 CA GLU 27 5.615 38.835 19.081 1.00 4.52 ATOM 708 C GLU 27 4.318 39.330 18.391 1.00 4.52 ATOM 709 O GLU 27 3.457 39.882 19.079 1.00 4.52 ATOM 710 CB GLU 27 6.738 39.888 18.986 1.00 4.93 ATOM 711 CG GLU 27 7.942 39.639 19.911 1.00 4.93 ATOM 712 CD GLU 27 7.568 39.518 21.405 1.00 4.93 ATOM 713 OE1 GLU 27 6.686 40.265 21.893 1.00 4.93 ATOM 714 OE2 GLU 27 8.176 38.682 22.118 1.00 4.93 ATOM 715 N LEU 28 4.130 39.130 17.079 1.00 4.01 ATOM 716 CA LEU 28 2.970 39.620 16.306 1.00 4.01 ATOM 717 C LEU 28 1.622 39.061 16.812 1.00 4.01 ATOM 718 O LEU 28 1.550 37.894 17.215 1.00 4.01 ATOM 719 CB LEU 28 3.134 39.270 14.812 1.00 3.88 ATOM 720 CG LEU 28 4.414 39.772 14.117 1.00 3.88 ATOM 721 CD1 LEU 28 4.422 39.302 12.664 1.00 3.88 ATOM 722 CD2 LEU 28 4.521 41.294 14.114 1.00 3.88 ATOM 723 N ARG 29 0.543 39.863 16.761 1.00 4.07 ATOM 724 CA ARG 29 -0.807 39.493 17.256 1.00 4.07 ATOM 725 C ARG 29 -1.962 40.132 16.470 1.00 4.07 ATOM 726 O ARG 29 -1.898 41.300 16.094 1.00 4.07 ATOM 727 CB ARG 29 -0.972 39.892 18.742 1.00 4.81 ATOM 728 CG ARG 29 -0.080 39.165 19.761 1.00 4.81 ATOM 729 CD ARG 29 -0.379 37.664 19.860 1.00 4.81 ATOM 730 NE ARG 29 0.480 37.011 20.869 1.00 4.81 ATOM 731 CZ ARG 29 1.648 36.424 20.674 1.00 4.81 ATOM 732 NH1 ARG 29 2.250 35.832 21.667 1.00 4.81 ATOM 733 NH2 ARG 29 2.241 36.406 19.513 1.00 4.81 ATOM 734 N VAL 30 -3.048 39.374 16.301 1.00 4.00 ATOM 735 CA VAL 30 -4.366 39.834 15.810 1.00 4.00 ATOM 736 C VAL 30 -5.241 40.265 16.997 1.00 4.00 ATOM 737 O VAL 30 -5.288 39.555 18.006 1.00 4.00 ATOM 738 CB VAL 30 -5.063 38.690 15.034 1.00 4.11 ATOM 739 CG1 VAL 30 -6.571 38.888 14.842 1.00 4.11 ATOM 740 CG2 VAL 30 -4.446 38.510 13.643 1.00 4.11 ATOM 741 N THR 31 -5.981 41.372 16.866 1.00 4.12 ATOM 742 CA THR 31 -7.044 41.796 17.809 1.00 4.12 ATOM 743 C THR 31 -8.294 42.302 17.055 1.00 4.12 ATOM 744 O THR 31 -8.412 42.107 15.844 1.00 4.12 ATOM 745 CB THR 31 -6.532 42.799 18.864 1.00 4.15 ATOM 746 OG1 THR 31 -6.154 44.021 18.274 1.00 4.15 ATOM 747 CG2 THR 31 -5.352 42.281 19.686 1.00 4.15 ATOM 748 N GLU 32 -9.278 42.892 17.752 1.00 4.21 ATOM 749 CA GLU 32 -10.623 43.194 17.208 1.00 4.21 ATOM 750 C GLU 32 -10.660 44.093 15.955 1.00 4.21 ATOM 751 O GLU 32 -11.568 43.939 15.132 1.00 4.21 ATOM 752 CB GLU 32 -11.500 43.826 18.303 1.00 4.79 ATOM 753 CG GLU 32 -11.742 42.887 19.496 1.00 4.79 ATOM 754 CD GLU 32 -12.897 43.363 20.404 1.00 4.79 ATOM 755 OE1 GLU 32 -13.080 44.591 20.599 1.00 4.79 ATOM 756 OE2 GLU 32 -13.627 42.503 20.954 1.00 4.79 ATOM 757 N ARG 33 -9.687 45.002 15.788 1.00 3.57 ATOM 758 CA ARG 33 -9.480 45.804 14.561 1.00 3.57 ATOM 759 C ARG 33 -7.997 45.898 14.154 1.00 3.57 ATOM 760 O ARG 33 -7.718 45.644 12.980 1.00 3.57 ATOM 761 CB ARG 33 -10.144 47.197 14.660 1.00 4.46 ATOM 762 CG ARG 33 -11.676 47.172 14.536 1.00 4.46 ATOM 763 CD ARG 33 -12.285 48.573 14.712 1.00 4.46 ATOM 764 NE ARG 33 -12.046 49.118 16.069 1.00 4.46 ATOM 765 CZ ARG 33 -12.646 48.769 17.195 1.00 4.46 ATOM 766 NH1 ARG 33 -12.247 49.264 18.332 1.00 4.46 ATOM 767 NH2 ARG 33 -13.638 47.924 17.226 1.00 4.46 ATOM 768 N PRO 34 -7.041 46.235 15.050 1.00 3.12 ATOM 769 CA PRO 34 -5.624 46.314 14.687 1.00 3.12 ATOM 770 C PRO 34 -4.926 44.951 14.529 1.00 3.12 ATOM 771 O PRO 34 -5.449 43.887 14.873 1.00 3.12 ATOM 772 CB PRO 34 -4.941 47.125 15.802 1.00 3.30 ATOM 773 CG PRO 34 -6.089 47.818 16.528 1.00 3.30 ATOM 774 CD PRO 34 -7.205 46.791 16.387 1.00 3.30 ATOM 775 N PHE 35 -3.678 45.029 14.068 1.00 3.07 ATOM 776 CA PHE 35 -2.693 43.949 14.049 1.00 3.07 ATOM 777 C PHE 35 -1.365 44.514 14.573 1.00 3.07 ATOM 778 O PHE 35 -0.896 45.554 14.095 1.00 3.07 ATOM 779 CB PHE 35 -2.590 43.362 12.637 1.00 3.25 ATOM 780 CG PHE 35 -1.494 42.329 12.439 1.00 3.25 ATOM 781 CD1 PHE 35 -1.777 40.962 12.615 1.00 3.25 ATOM 782 CD2 PHE 35 -0.202 42.724 12.035 1.00 3.25 ATOM 783 CE1 PHE 35 -0.789 39.992 12.369 1.00 3.25 ATOM 784 CE2 PHE 35 0.791 41.754 11.795 1.00 3.25 ATOM 785 CZ PHE 35 0.494 40.388 11.951 1.00 3.25 ATOM 786 N TRP 36 -0.812 43.882 15.610 1.00 3.22 ATOM 787 CA TRP 36 0.327 44.383 16.379 1.00 3.22 ATOM 788 C TRP 36 1.668 43.979 15.756 1.00 3.22 ATOM 789 O TRP 36 1.871 42.825 15.381 1.00 3.22 ATOM 790 CB TRP 36 0.234 43.916 17.840 1.00 3.99 ATOM 791 CG TRP 36 -0.962 44.360 18.638 1.00 3.99 ATOM 792 CD1 TRP 36 -1.893 45.271 18.263 1.00 3.99 ATOM 793 CD2 TRP 36 -1.350 43.941 19.986 1.00 3.99 ATOM 794 NE1 TRP 36 -2.827 45.433 19.266 1.00 3.99 ATOM 795 CE2 TRP 36 -2.539 44.640 20.356 1.00 3.99 ATOM 796 CE3 TRP 36 -0.814 43.045 20.937 1.00 3.99 ATOM 797 CZ2 TRP 36 -3.162 44.463 21.600 1.00 3.99 ATOM 798 CZ3 TRP 36 -1.438 42.849 22.186 1.00 3.99 ATOM 799 CH2 TRP 36 -2.609 43.555 22.519 1.00 3.99 ATOM 800 N ILE 37 2.593 44.944 15.703 1.00 3.15 ATOM 801 CA ILE 37 3.881 44.879 14.986 1.00 3.15 ATOM 802 C ILE 37 5.071 45.121 15.933 1.00 3.15 ATOM 803 O ILE 37 5.999 45.878 15.653 1.00 3.15 ATOM 804 CB ILE 37 3.843 45.755 13.709 1.00 2.96 ATOM 805 CG1 ILE 37 3.445 47.222 14.002 1.00 2.96 ATOM 806 CG2 ILE 37 2.902 45.091 12.686 1.00 2.96 ATOM 807 CD1 ILE 37 3.354 48.113 12.759 1.00 2.96 ATOM 808 N SER 38 5.011 44.462 17.093 1.00 3.71 ATOM 809 CA SER 38 6.024 44.428 18.162 1.00 3.71 ATOM 810 C SER 38 7.274 43.585 17.838 1.00 3.71 ATOM 811 O SER 38 8.270 43.673 18.559 1.00 3.71 ATOM 812 CB SER 38 5.347 43.888 19.431 1.00 3.89 ATOM 813 OG SER 38 4.579 42.742 19.104 1.00 3.89 ATOM 814 N SER 39 7.259 42.794 16.758 1.00 4.03 ATOM 815 CA SER 39 8.449 42.107 16.230 1.00 4.03 ATOM 816 C SER 39 9.492 43.113 15.713 1.00 4.03 ATOM 817 O SER 39 9.150 44.022 14.950 1.00 4.03 ATOM 818 CB SER 39 8.039 41.145 15.108 1.00 3.99 ATOM 819 OG SER 39 9.155 40.475 14.565 1.00 3.99 ATOM 820 N PHE 40 10.761 42.937 16.112 1.00 4.06 ATOM 821 CA PHE 40 11.917 43.728 15.660 1.00 4.06 ATOM 822 C PHE 40 13.118 42.825 15.325 1.00 4.06 ATOM 823 O PHE 40 13.335 41.794 15.969 1.00 4.06 ATOM 824 CB PHE 40 12.322 44.772 16.721 1.00 4.54 ATOM 825 CG PHE 40 11.315 45.863 17.055 1.00 4.54 ATOM 826 CD1 PHE 40 10.612 46.541 16.038 1.00 4.54 ATOM 827 CD2 PHE 40 11.157 46.277 18.392 1.00 4.54 ATOM 828 CE1 PHE 40 9.735 47.591 16.358 1.00 4.54 ATOM 829 CE2 PHE 40 10.313 47.356 18.710 1.00 4.54 ATOM 830 CZ PHE 40 9.588 48.003 17.693 1.00 4.54 ATOM 831 N ILE 41 13.913 43.222 14.324 1.00 4.29 ATOM 832 CA ILE 41 15.047 42.436 13.801 1.00 4.29 ATOM 833 C ILE 41 16.355 42.784 14.537 1.00 4.29 ATOM 834 O ILE 41 16.662 43.960 14.747 1.00 4.29 ATOM 835 CB ILE 41 15.210 42.614 12.267 1.00 4.07 ATOM 836 CG1 ILE 41 13.861 42.510 11.513 1.00 4.07 ATOM 837 CG2 ILE 41 16.205 41.561 11.737 1.00 4.07 ATOM 838 CD1 ILE 41 13.940 42.799 10.006 1.00 4.07 ATOM 839 N GLY 42 17.147 41.763 14.888 1.00 5.02 ATOM 840 CA GLY 42 18.525 41.892 15.384 1.00 5.02 ATOM 841 C GLY 42 19.544 41.348 14.371 1.00 5.02 ATOM 842 O GLY 42 19.301 40.307 13.754 1.00 5.02 ATOM 843 N ARG 43 20.684 42.039 14.211 1.00 5.33 ATOM 844 CA ARG 43 21.757 41.748 13.224 1.00 5.33 ATOM 845 C ARG 43 21.253 41.731 11.761 1.00 5.33 ATOM 846 O ARG 43 20.153 42.188 11.460 1.00 5.33 ATOM 847 CB ARG 43 22.541 40.483 13.661 1.00 6.46 ATOM 848 CG ARG 43 23.258 40.687 15.011 1.00 6.46 ATOM 849 CD ARG 43 24.060 39.455 15.457 1.00 6.46 ATOM 850 NE ARG 43 25.222 39.186 14.581 1.00 6.46 ATOM 851 CZ ARG 43 26.020 38.132 14.629 1.00 6.46 ATOM 852 NH1 ARG 43 27.017 38.020 13.797 1.00 6.46 ATOM 853 NH2 ARG 43 25.853 37.171 15.495 1.00 6.46 ATOM 854 N SER 44 22.085 41.251 10.832 1.00 5.15 ATOM 855 CA SER 44 21.935 41.294 9.358 1.00 5.15 ATOM 856 C SER 44 20.832 40.384 8.758 1.00 5.15 ATOM 857 O SER 44 20.892 40.001 7.585 1.00 5.15 ATOM 858 CB SER 44 23.307 40.975 8.740 1.00 5.30 ATOM 859 OG SER 44 23.760 39.691 9.159 1.00 5.30 ATOM 860 N LYS 45 19.831 40.011 9.563 1.00 4.88 ATOM 861 CA LYS 45 18.765 39.033 9.262 1.00 4.88 ATOM 862 C LYS 45 17.546 39.722 8.612 1.00 4.88 ATOM 863 O LYS 45 17.583 40.927 8.361 1.00 4.88 ATOM 864 CB LYS 45 18.474 38.255 10.565 1.00 5.34 ATOM 865 CG LYS 45 19.742 37.506 11.045 1.00 5.34 ATOM 866 CD LYS 45 19.632 36.919 12.458 1.00 5.34 ATOM 867 CE LYS 45 21.023 36.431 12.899 1.00 5.34 ATOM 868 NZ LYS 45 21.058 36.025 14.333 1.00 5.34 TER END