####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name S0953s2TS196_3-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name S0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap S0953s2TS196_3-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 44 2 - 45 4.23 4.23 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 17 20 - 36 1.99 6.09 LCS_AVERAGE: 30.89 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 20 - 31 0.57 5.47 LCS_AVERAGE: 16.84 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 4 44 0 3 3 13 22 24 27 33 37 38 39 41 42 42 43 43 43 43 44 44 LCS_GDT V 3 V 3 3 8 44 3 4 5 8 12 23 27 30 37 38 39 41 42 42 43 43 43 43 44 44 LCS_GDT Q 4 Q 4 3 8 44 3 3 6 13 22 24 30 33 37 38 39 41 42 42 43 43 43 43 44 44 LCS_GDT G 5 G 5 4 8 44 3 5 14 17 22 25 31 33 37 38 39 41 42 42 43 43 43 43 44 44 LCS_GDT P 6 P 6 4 8 44 3 4 6 8 12 17 27 33 37 38 39 41 42 42 43 43 43 43 44 44 LCS_GDT W 7 W 7 4 8 44 3 4 4 7 9 11 14 25 30 34 39 40 42 42 43 43 43 43 44 44 LCS_GDT V 8 V 8 4 10 44 3 4 6 8 12 23 31 33 37 38 39 41 42 42 43 43 43 43 44 44 LCS_GDT G 9 G 9 9 15 44 8 13 14 15 19 24 29 33 37 38 39 41 42 42 43 43 43 43 44 44 LCS_GDT S 10 S 10 9 15 44 7 9 14 17 22 25 31 33 37 38 39 41 42 42 43 43 43 43 44 44 LCS_GDT S 11 S 11 9 15 44 7 9 9 10 20 25 31 33 37 38 39 41 42 42 43 43 43 43 44 44 LCS_GDT Y 12 Y 12 9 15 44 7 9 9 10 14 25 31 33 37 38 39 41 42 42 43 43 43 43 44 44 LCS_GDT V 13 V 13 9 15 44 7 9 14 17 21 25 31 33 37 38 39 41 42 42 43 43 43 43 44 44 LCS_GDT A 14 A 14 9 15 44 7 9 9 10 14 23 31 33 37 38 39 41 42 42 43 43 43 43 44 44 LCS_GDT E 15 E 15 9 15 44 7 9 9 10 14 17 25 33 34 38 39 41 42 42 43 43 43 43 44 44 LCS_GDT T 16 T 16 9 15 44 7 9 9 10 20 25 31 33 37 38 39 41 42 42 43 43 43 43 44 44 LCS_GDT G 17 G 17 9 15 44 4 9 9 11 20 25 31 33 37 38 39 41 42 42 43 43 43 43 44 44 LCS_GDT Q 18 Q 18 3 15 44 3 3 4 9 14 17 31 33 37 38 39 41 42 42 43 43 43 43 44 44 LCS_GDT N 19 N 19 3 15 44 3 4 6 7 10 23 31 33 37 38 39 41 42 42 43 43 43 43 44 44 LCS_GDT W 20 W 20 12 17 44 9 13 14 17 22 25 31 33 37 38 39 41 42 42 43 43 43 43 44 44 LCS_GDT A 21 A 21 12 17 44 8 13 14 17 22 25 31 33 37 38 39 41 42 42 43 43 43 43 44 44 LCS_GDT S 22 S 22 12 17 44 7 13 14 17 22 25 31 33 37 38 39 41 42 42 43 43 43 43 44 44 LCS_GDT L 23 L 23 12 17 44 7 13 14 17 22 25 31 33 37 38 39 41 42 42 43 43 43 43 44 44 LCS_GDT A 24 A 24 12 17 44 9 13 14 17 22 25 31 33 37 38 39 41 42 42 43 43 43 43 44 44 LCS_GDT A 25 A 25 12 17 44 9 13 14 17 22 25 31 33 37 38 39 41 42 42 43 43 43 43 44 44 LCS_GDT N 26 N 26 12 17 44 9 13 14 17 22 25 31 33 37 38 39 41 42 42 43 43 43 43 44 44 LCS_GDT E 27 E 27 12 17 44 9 13 14 17 22 25 31 33 37 38 39 41 42 42 43 43 43 43 44 44 LCS_GDT L 28 L 28 12 17 44 9 13 14 17 22 25 31 33 37 38 39 41 42 42 43 43 43 43 44 44 LCS_GDT R 29 R 29 12 17 44 9 13 14 17 22 25 31 33 37 38 39 41 42 42 43 43 43 43 44 44 LCS_GDT V 30 V 30 12 17 44 9 13 14 17 22 25 31 33 37 38 39 41 42 42 43 43 43 43 44 44 LCS_GDT T 31 T 31 12 17 44 9 13 14 17 22 25 31 33 37 38 39 41 42 42 43 43 43 43 44 44 LCS_GDT E 32 E 32 3 17 44 2 3 3 6 6 17 22 31 37 38 39 41 42 42 43 43 43 43 44 44 LCS_GDT R 33 R 33 3 17 44 3 3 12 16 22 25 31 33 37 38 39 41 42 42 43 43 43 43 44 44 LCS_GDT P 34 P 34 3 17 44 3 3 3 4 6 13 19 29 30 33 39 41 42 42 43 43 43 43 44 44 LCS_GDT F 35 F 35 3 17 44 3 10 14 17 22 25 31 33 37 38 39 41 42 42 43 43 43 43 44 44 LCS_GDT W 36 W 36 6 17 44 4 5 8 10 15 25 31 33 37 38 39 41 42 42 43 43 43 43 44 44 LCS_GDT I 37 I 37 6 10 44 4 5 8 10 16 22 31 33 37 38 39 41 42 42 43 43 43 43 44 44 LCS_GDT S 38 S 38 6 10 44 4 5 8 16 22 25 31 33 37 38 39 41 42 42 43 43 43 43 44 44 LCS_GDT S 39 S 39 6 10 44 4 5 13 17 22 25 31 33 37 38 39 41 42 42 43 43 43 43 44 44 LCS_GDT F 40 F 40 6 10 44 4 5 8 11 22 24 31 33 37 38 39 41 42 42 43 43 43 43 44 44 LCS_GDT I 41 I 41 6 10 44 4 5 8 17 22 25 31 33 37 38 39 41 42 42 43 43 43 43 44 44 LCS_GDT G 42 G 42 6 10 44 3 4 8 10 11 11 24 28 33 37 39 41 42 42 43 43 43 43 44 44 LCS_GDT R 43 R 43 6 10 44 3 5 8 10 11 11 13 22 29 33 39 41 42 42 43 43 43 43 44 44 LCS_GDT S 44 S 44 6 10 44 3 5 8 10 11 11 13 15 18 25 31 36 38 40 43 43 43 43 44 44 LCS_GDT K 45 K 45 4 10 44 0 3 4 10 11 11 12 14 16 19 23 25 30 35 37 37 41 41 44 44 LCS_AVERAGE LCS_A: 49.24 ( 16.84 30.89 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 9 13 14 17 22 25 31 33 37 38 39 41 42 42 43 43 43 43 44 44 GDT PERCENT_AT 20.45 29.55 31.82 38.64 50.00 56.82 70.45 75.00 84.09 86.36 88.64 93.18 95.45 95.45 97.73 97.73 97.73 97.73 100.00 100.00 GDT RMS_LOCAL 0.35 0.56 0.68 1.32 1.73 2.18 2.53 2.62 2.91 3.01 3.13 3.43 3.52 3.52 3.79 3.79 3.79 3.79 4.23 4.23 GDT RMS_ALL_AT 5.85 5.51 5.53 4.52 4.48 4.56 4.63 4.59 4.46 4.50 4.49 4.34 4.33 4.33 4.27 4.27 4.27 4.27 4.23 4.23 # Checking swapping # possible swapping detected: E 15 E 15 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 4.838 0 0.414 0.424 6.239 1.364 1.455 - LGA V 3 V 3 4.667 0 0.252 1.072 6.485 7.273 4.156 6.485 LGA Q 4 Q 4 3.312 0 0.137 0.268 6.324 23.636 11.111 5.253 LGA G 5 G 5 1.418 0 0.183 0.183 5.415 31.818 31.818 - LGA P 6 P 6 5.007 0 0.124 0.168 6.341 0.455 0.260 6.341 LGA W 7 W 7 6.803 0 0.197 1.259 13.487 0.455 0.130 13.487 LGA V 8 V 8 3.527 0 0.403 1.025 6.569 26.364 17.403 3.643 LGA G 9 G 9 3.930 0 0.547 0.547 3.930 25.909 25.909 - LGA S 10 S 10 1.442 0 0.091 0.086 2.214 59.091 56.667 1.403 LGA S 11 S 11 2.996 0 0.086 0.765 5.428 26.818 18.182 5.428 LGA Y 12 Y 12 3.253 0 0.109 0.788 9.779 28.182 9.848 9.779 LGA V 13 V 13 1.072 0 0.081 1.096 5.664 55.000 40.779 5.664 LGA A 14 A 14 3.925 0 0.044 0.059 5.330 13.636 11.273 - LGA E 15 E 15 5.140 0 0.054 1.100 7.951 2.727 1.212 7.873 LGA T 16 T 16 3.013 0 0.138 0.269 3.391 20.455 25.455 1.715 LGA G 17 G 17 2.689 0 0.642 0.642 2.956 30.000 30.000 - LGA Q 18 Q 18 4.017 0 0.593 0.452 8.682 9.091 4.040 8.280 LGA N 19 N 19 3.183 0 0.407 1.363 9.396 28.182 14.318 7.277 LGA W 20 W 20 2.919 0 0.506 1.139 9.688 46.364 13.247 9.598 LGA A 21 A 21 1.356 0 0.043 0.050 1.728 61.818 62.545 - LGA S 22 S 22 1.235 0 0.044 0.617 1.659 65.455 63.030 1.296 LGA L 23 L 23 1.886 0 0.078 1.416 6.850 50.909 28.864 5.275 LGA A 24 A 24 2.040 0 0.010 0.032 2.198 47.727 45.818 - LGA A 25 A 25 1.040 0 0.033 0.038 1.755 61.818 69.455 - LGA N 26 N 26 1.300 0 0.027 0.490 2.302 58.182 58.409 1.226 LGA E 27 E 27 1.764 0 0.039 1.401 5.870 47.727 29.697 5.870 LGA L 28 L 28 1.994 0 0.063 1.388 5.439 44.545 30.682 5.439 LGA R 29 R 29 2.008 0 0.112 1.903 11.867 47.727 19.835 11.867 LGA V 30 V 30 1.778 0 0.274 1.104 2.526 50.909 43.896 2.258 LGA T 31 T 31 2.029 0 0.703 0.852 6.110 36.364 23.117 3.831 LGA E 32 E 32 5.503 0 0.502 1.147 9.954 4.545 2.020 9.154 LGA R 33 R 33 3.070 0 0.170 1.008 8.207 7.273 10.248 7.011 LGA P 34 P 34 5.917 0 0.664 0.615 8.143 0.000 0.000 8.143 LGA F 35 F 35 2.364 0 0.604 1.180 9.891 39.545 16.033 9.891 LGA W 36 W 36 3.497 0 0.643 0.506 8.801 31.364 8.961 8.801 LGA I 37 I 37 3.771 0 0.060 0.780 7.369 26.364 13.182 7.369 LGA S 38 S 38 2.701 0 0.124 0.560 5.925 30.909 21.515 5.925 LGA S 39 S 39 2.050 0 0.138 0.709 4.144 38.182 33.636 3.806 LGA F 40 F 40 2.711 0 0.169 0.349 10.104 36.818 14.380 9.877 LGA I 41 I 41 1.862 0 0.081 0.545 6.656 35.909 20.227 6.656 LGA G 42 G 42 7.029 0 0.139 0.139 9.745 0.455 0.455 - LGA R 43 R 43 8.711 0 0.215 1.382 13.295 0.000 0.000 13.295 LGA S 44 S 44 11.403 0 0.477 0.846 14.024 0.000 0.000 12.577 LGA K 45 K 45 15.424 0 0.588 0.777 19.051 0.000 0.000 18.958 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 4.233 4.211 5.974 28.667 21.211 9.091 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 33 2.62 60.227 56.376 1.214 LGA_LOCAL RMSD: 2.618 Number of atoms: 33 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 4.592 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 4.233 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.381172 * X + -0.180365 * Y + -0.906739 * Z + -16.801437 Y_new = 0.921424 * X + -0.154108 * Y + -0.356691 * Z + 27.421333 Z_new = -0.075401 * X + -0.971452 * Y + 0.224935 * Z + 17.581491 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.963038 0.075472 -1.343261 [DEG: 112.4738 4.3243 -76.9632 ] ZXZ: -1.196012 1.343920 -3.064131 [DEG: -68.5264 77.0010 -175.5618 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: S0953s2TS196_3-D1 REMARK 2: S0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap S0953s2TS196_3-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 33 2.62 56.376 4.23 REMARK ---------------------------------------------------------- MOLECULE S0953s2TS196_3-D1 PFRMAT TS TARGET S0953s2 MODEL 3 PARENT N/A ATOM 17 N ALA 2 9.614 39.719 12.955 1.00 4.40 N ATOM 19 CA ALA 2 9.674 40.793 11.957 1.00 4.40 C ATOM 21 CB ALA 2 9.500 42.162 12.636 1.00 4.40 C ATOM 25 C ALA 2 10.672 40.683 10.791 1.00 4.40 C ATOM 26 O ALA 2 11.637 41.435 10.757 1.00 4.40 O ATOM 27 N VAL 3 10.506 39.692 9.899 1.00 5.43 N ATOM 29 CA VAL 3 11.485 39.320 8.835 1.00 5.43 C ATOM 31 CB VAL 3 11.868 37.838 8.908 1.00 5.43 C ATOM 33 CG1 VAL 3 12.423 37.447 10.279 1.00 5.43 C ATOM 37 CG2 VAL 3 10.740 36.891 8.497 1.00 5.43 C ATOM 41 C VAL 3 11.033 39.804 7.451 1.00 5.43 C ATOM 42 O VAL 3 10.282 40.763 7.371 1.00 5.43 O ATOM 43 N GLN 4 11.387 39.146 6.342 1.00 5.14 N ATOM 45 CA GLN 4 11.110 39.649 4.978 1.00 5.14 C ATOM 47 CB GLN 4 12.406 39.760 4.167 1.00 5.14 C ATOM 50 CG GLN 4 13.470 40.656 4.826 1.00 5.14 C ATOM 53 CD GLN 4 14.870 40.360 4.318 1.00 5.14 C ATOM 54 OE1 GLN 4 15.231 39.208 4.114 1.00 5.14 O ATOM 55 NE2 GLN 4 15.718 41.348 4.195 1.00 5.14 N ATOM 58 C GLN 4 10.111 38.749 4.233 1.00 5.14 C ATOM 59 O GLN 4 10.380 37.563 4.026 1.00 5.14 O ATOM 60 N GLY 5 8.926 39.311 3.934 1.00 4.21 N ATOM 62 CA GLY 5 7.950 38.817 2.947 1.00 4.21 C ATOM 65 C GLY 5 6.492 39.177 3.300 1.00 4.21 C ATOM 66 O GLY 5 6.068 38.845 4.401 1.00 4.21 O ATOM 67 N PRO 6 5.680 39.763 2.398 1.00 3.29 N ATOM 68 CD PRO 6 5.888 39.824 0.959 1.00 3.29 C ATOM 71 CG PRO 6 4.668 40.547 0.392 1.00 3.29 C ATOM 74 CB PRO 6 4.247 41.470 1.534 1.00 3.29 C ATOM 77 CA PRO 6 4.576 40.657 2.791 1.00 3.29 C ATOM 79 C PRO 6 3.324 39.977 3.365 1.00 3.29 C ATOM 80 O PRO 6 2.731 40.514 4.293 1.00 3.29 O ATOM 81 N TRP 7 2.806 38.905 2.758 1.00 4.43 N ATOM 83 CA TRP 7 1.761 38.079 3.374 1.00 4.43 C ATOM 85 CB TRP 7 0.931 37.377 2.282 1.00 4.43 C ATOM 88 CG TRP 7 0.065 36.240 2.746 1.00 4.43 C ATOM 89 CD1 TRP 7 0.429 34.936 2.751 1.00 4.43 C ATOM 91 NE1 TRP 7 -0.626 34.150 3.171 1.00 4.43 N ATOM 93 CE2 TRP 7 -1.727 34.917 3.484 1.00 4.43 C ATOM 94 CZ2 TRP 7 -2.995 34.604 4.000 1.00 4.43 C ATOM 96 CH2 TRP 7 -3.920 35.639 4.209 1.00 4.43 C ATOM 98 CZ3 TRP 7 -3.575 36.965 3.890 1.00 4.43 C ATOM 100 CE3 TRP 7 -2.292 37.271 3.392 1.00 4.43 C ATOM 102 CD2 TRP 7 -1.327 36.257 3.196 1.00 4.43 C ATOM 103 C TRP 7 2.438 37.080 4.313 1.00 4.43 C ATOM 104 O TRP 7 2.915 36.041 3.857 1.00 4.43 O ATOM 105 N VAL 8 2.549 37.460 5.593 1.00 2.62 N ATOM 107 CA VAL 8 2.477 36.585 6.785 1.00 2.62 C ATOM 109 CB VAL 8 1.016 36.588 7.316 1.00 2.62 C ATOM 111 CG1 VAL 8 -0.039 36.255 6.252 1.00 2.62 C ATOM 115 CG2 VAL 8 0.721 35.737 8.553 1.00 2.62 C ATOM 119 C VAL 8 3.107 35.196 6.639 1.00 2.62 C ATOM 120 O VAL 8 2.504 34.165 6.914 1.00 2.62 O ATOM 121 N GLY 9 4.340 35.202 6.135 1.00 2.85 N ATOM 123 CA GLY 9 5.549 34.618 6.715 1.00 2.85 C ATOM 126 C GLY 9 5.649 33.136 6.527 1.00 2.85 C ATOM 127 O GLY 9 5.636 32.452 7.529 1.00 2.85 O ATOM 128 N SER 10 5.818 32.668 5.295 1.00 2.54 N ATOM 130 CA SER 10 5.433 31.312 4.886 1.00 2.54 C ATOM 132 CB SER 10 5.767 31.116 3.402 1.00 2.54 C ATOM 135 OG SER 10 7.096 31.544 3.131 1.00 2.54 O ATOM 137 C SER 10 6.084 30.196 5.711 1.00 2.54 C ATOM 138 O SER 10 5.415 29.237 6.092 1.00 2.54 O ATOM 139 N SER 11 7.417 30.257 5.887 1.00 2.29 N ATOM 141 CA SER 11 8.103 29.403 6.856 1.00 2.29 C ATOM 143 CB SER 11 9.610 29.477 6.768 1.00 2.29 C ATOM 146 OG SER 11 10.135 29.620 5.452 1.00 2.29 O ATOM 148 C SER 11 7.570 29.531 8.295 1.00 2.29 C ATOM 149 O SER 11 7.106 28.532 8.815 1.00 2.29 O ATOM 150 N TYR 12 7.524 30.723 8.901 1.00 1.71 N ATOM 152 CA TYR 12 6.926 30.978 10.225 1.00 1.71 C ATOM 154 CB TYR 12 6.878 32.491 10.444 1.00 1.71 C ATOM 157 CG TYR 12 6.079 32.939 11.637 1.00 1.71 C ATOM 158 CD1 TYR 12 6.239 32.295 12.874 1.00 1.71 C ATOM 160 CE1 TYR 12 5.484 32.701 13.981 1.00 1.71 C ATOM 162 CZ TYR 12 4.571 33.754 13.840 1.00 1.71 C ATOM 163 OH TYR 12 3.749 34.090 14.845 1.00 1.71 O ATOM 165 CE2 TYR 12 4.455 34.442 12.622 1.00 1.71 C ATOM 167 CD2 TYR 12 5.192 34.022 11.508 1.00 1.71 C ATOM 169 C TYR 12 5.541 30.315 10.432 1.00 1.71 C ATOM 170 O TYR 12 5.320 29.578 11.401 1.00 1.71 O ATOM 171 N VAL 13 4.564 30.625 9.574 1.00 1.51 N ATOM 173 CA VAL 13 3.207 30.101 9.733 1.00 1.51 C ATOM 175 CB VAL 13 2.190 30.793 8.825 1.00 1.51 C ATOM 177 CG1 VAL 13 1.994 32.242 9.254 1.00 1.51 C ATOM 181 CG2 VAL 13 2.502 30.762 7.331 1.00 1.51 C ATOM 185 C VAL 13 3.100 28.591 9.536 1.00 1.51 C ATOM 186 O VAL 13 2.296 27.973 10.223 1.00 1.51 O ATOM 187 N ALA 14 3.907 27.960 8.676 1.00 1.93 N ATOM 189 CA ALA 14 3.998 26.500 8.679 1.00 1.93 C ATOM 191 CB ALA 14 4.871 26.037 7.505 1.00 1.93 C ATOM 195 C ALA 14 4.482 25.962 10.041 1.00 1.93 C ATOM 196 O ALA 14 3.859 25.059 10.609 1.00 1.93 O ATOM 197 N GLU 15 5.575 26.555 10.537 1.00 2.13 N ATOM 199 CA GLU 15 6.414 26.141 11.671 1.00 2.13 C ATOM 201 CB GLU 15 7.684 26.991 11.673 1.00 2.13 C ATOM 204 CG GLU 15 8.711 26.481 10.685 1.00 2.13 C ATOM 207 CD GLU 15 9.910 27.413 10.621 1.00 2.13 C ATOM 208 OE1 GLU 15 10.670 27.413 11.613 1.00 2.13 O ATOM 209 OE2 GLU 15 10.137 28.081 9.585 1.00 2.13 O ATOM 210 C GLU 15 5.736 26.373 13.021 1.00 2.13 C ATOM 211 O GLU 15 6.022 25.663 13.983 1.00 2.13 O ATOM 212 N THR 16 4.787 27.322 13.052 1.00 2.03 N ATOM 214 CA THR 16 3.803 27.456 14.133 1.00 2.03 C ATOM 216 CB THR 16 3.332 28.907 14.328 1.00 2.03 C ATOM 218 CG2 THR 16 4.414 29.774 14.962 1.00 2.03 C ATOM 222 OG1 THR 16 2.984 29.524 13.113 1.00 2.03 O ATOM 224 C THR 16 2.591 26.533 13.963 1.00 2.03 C ATOM 225 O THR 16 2.152 25.931 14.945 1.00 2.03 O ATOM 226 N GLY 17 1.979 26.472 12.776 1.00 2.28 N ATOM 228 CA GLY 17 0.842 25.593 12.495 1.00 2.28 C ATOM 231 C GLY 17 -0.253 26.185 11.595 1.00 2.28 C ATOM 232 O GLY 17 -0.403 27.391 11.427 1.00 2.28 O ATOM 233 N GLN 18 -1.093 25.297 11.052 1.00 2.62 N ATOM 235 CA GLN 18 -1.885 25.548 9.835 1.00 2.62 C ATOM 237 CB GLN 18 -2.184 24.222 9.102 1.00 2.62 C ATOM 240 CG GLN 18 -1.029 23.193 9.082 1.00 2.62 C ATOM 243 CD GLN 18 0.361 23.794 8.850 1.00 2.62 C ATOM 244 OE1 GLN 18 0.577 24.615 7.974 1.00 2.62 O ATOM 245 NE2 GLN 18 1.322 23.440 9.678 1.00 2.62 N ATOM 248 C GLN 18 -3.137 26.450 10.000 1.00 2.62 C ATOM 249 O GLN 18 -4.003 26.464 9.132 1.00 2.62 O ATOM 250 N ASN 19 -3.244 27.232 11.085 1.00 2.70 N ATOM 252 CA ASN 19 -4.354 28.172 11.337 1.00 2.70 C ATOM 254 CB ASN 19 -4.852 27.989 12.787 1.00 2.70 C ATOM 257 CG ASN 19 -6.137 28.752 13.084 1.00 2.70 C ATOM 258 OD1 ASN 19 -6.878 29.162 12.207 1.00 2.70 O ATOM 259 ND2 ASN 19 -6.484 28.919 14.339 1.00 2.70 N ATOM 262 C ASN 19 -3.885 29.610 11.001 1.00 2.70 C ATOM 263 O ASN 19 -4.037 30.563 11.774 1.00 2.70 O ATOM 264 N TRP 20 -3.179 29.679 9.863 1.00 1.98 N ATOM 266 CA TRP 20 -2.031 30.542 9.580 1.00 1.98 C ATOM 268 CB TRP 20 -1.844 30.580 8.048 1.00 1.98 C ATOM 271 CG TRP 20 -1.227 29.373 7.392 1.00 1.98 C ATOM 272 CD1 TRP 20 -0.542 28.380 8.011 1.00 1.98 C ATOM 274 NE1 TRP 20 -0.105 27.458 7.085 1.00 1.98 N ATOM 276 CE2 TRP 20 -0.454 27.820 5.804 1.00 1.98 C ATOM 277 CZ2 TRP 20 -0.232 27.233 4.548 1.00 1.98 C ATOM 279 CH2 TRP 20 -0.687 27.896 3.396 1.00 1.98 C ATOM 281 CZ3 TRP 20 -1.337 29.138 3.513 1.00 1.98 C ATOM 283 CE3 TRP 20 -1.559 29.712 4.781 1.00 1.98 C ATOM 285 CD2 TRP 20 -1.146 29.057 5.963 1.00 1.98 C ATOM 286 C TRP 20 -2.020 31.929 10.231 1.00 1.98 C ATOM 287 O TRP 20 -1.343 32.149 11.234 1.00 1.98 O ATOM 288 N ALA 21 -2.797 32.857 9.678 1.00 1.37 N ATOM 290 CA ALA 21 -2.587 34.278 9.923 1.00 1.37 C ATOM 292 CB ALA 21 -2.979 35.001 8.632 1.00 1.37 C ATOM 296 C ALA 21 -3.317 34.803 11.174 1.00 1.37 C ATOM 297 O ALA 21 -2.874 35.766 11.804 1.00 1.37 O ATOM 298 N SER 22 -4.453 34.184 11.515 1.00 1.67 N ATOM 300 CA SER 22 -5.192 34.406 12.762 1.00 1.67 C ATOM 302 CB SER 22 -6.519 33.640 12.719 1.00 1.67 C ATOM 305 OG SER 22 -7.292 34.036 11.601 1.00 1.67 O ATOM 307 C SER 22 -4.407 33.934 13.989 1.00 1.67 C ATOM 308 O SER 22 -4.277 34.679 14.961 1.00 1.67 O ATOM 309 N LEU 23 -3.823 32.726 13.932 1.00 1.90 N ATOM 311 CA LEU 23 -2.898 32.249 14.962 1.00 1.90 C ATOM 313 CB LEU 23 -2.374 30.858 14.567 1.00 1.90 C ATOM 316 CG LEU 23 -1.395 30.231 15.580 1.00 1.90 C ATOM 318 CD1 LEU 23 -2.090 29.849 16.891 1.00 1.90 C ATOM 322 CD2 LEU 23 -0.812 28.954 14.977 1.00 1.90 C ATOM 326 C LEU 23 -1.743 33.226 15.213 1.00 1.90 C ATOM 327 O LEU 23 -1.485 33.555 16.369 1.00 1.90 O ATOM 328 N ALA 24 -1.014 33.604 14.165 1.00 1.25 N ATOM 330 CA ALA 24 0.062 34.582 14.257 1.00 1.25 C ATOM 332 CB ALA 24 0.703 34.715 12.878 1.00 1.25 C ATOM 336 C ALA 24 -0.445 35.931 14.808 1.00 1.25 C ATOM 337 O ALA 24 0.233 36.565 15.606 1.00 1.25 O ATOM 338 N ALA 25 -1.672 36.351 14.465 1.00 1.07 N ATOM 340 CA ALA 25 -2.166 37.684 14.834 1.00 1.07 C ATOM 342 CB ALA 25 -3.397 38.000 13.969 1.00 1.07 C ATOM 346 C ALA 25 -2.464 37.833 16.333 1.00 1.07 C ATOM 347 O ALA 25 -2.110 38.844 16.962 1.00 1.07 O ATOM 348 N ASN 26 -3.174 36.842 16.870 1.00 1.72 N ATOM 350 CA ASN 26 -3.493 36.815 18.287 1.00 1.72 C ATOM 352 CB ASN 26 -4.695 35.878 18.514 1.00 1.72 C ATOM 355 CG ASN 26 -6.017 36.590 18.240 1.00 1.72 C ATOM 356 OD1 ASN 26 -6.250 37.163 17.191 1.00 1.72 O ATOM 357 ND2 ASN 26 -6.967 36.487 19.144 1.00 1.72 N ATOM 360 C ASN 26 -2.269 36.494 19.162 1.00 1.72 C ATOM 361 O ASN 26 -2.098 37.156 20.187 1.00 1.72 O ATOM 362 N GLU 27 -1.415 35.548 18.746 1.00 2.09 N ATOM 364 CA GLU 27 -0.137 35.184 19.388 1.00 2.09 C ATOM 366 CB GLU 27 0.468 33.952 18.681 1.00 2.09 C ATOM 369 CG GLU 27 1.764 33.393 19.312 1.00 2.09 C ATOM 372 CD GLU 27 3.071 33.760 18.576 1.00 2.09 C ATOM 373 OE1 GLU 27 4.149 33.740 19.212 1.00 2.09 O ATOM 374 OE2 GLU 27 3.034 33.984 17.348 1.00 2.09 O ATOM 375 C GLU 27 0.869 36.336 19.408 1.00 2.09 C ATOM 376 O GLU 27 1.642 36.433 20.360 1.00 2.09 O ATOM 377 N LEU 28 0.780 37.271 18.453 1.00 2.04 N ATOM 379 CA LEU 28 1.564 38.510 18.481 1.00 2.04 C ATOM 381 CB LEU 28 2.017 38.921 17.068 1.00 2.04 C ATOM 384 CG LEU 28 3.218 39.888 16.983 1.00 2.04 C ATOM 386 CD1 LEU 28 4.404 39.503 17.872 1.00 2.04 C ATOM 390 CD2 LEU 28 3.728 39.950 15.540 1.00 2.04 C ATOM 394 C LEU 28 0.816 39.664 19.180 1.00 2.04 C ATOM 395 O LEU 28 1.369 40.748 19.369 1.00 2.04 O ATOM 396 N ARG 29 -0.425 39.417 19.632 1.00 2.44 N ATOM 398 CA ARG 29 -1.383 40.433 20.059 1.00 2.44 C ATOM 400 CB ARG 29 -1.230 40.678 21.576 1.00 2.44 C ATOM 403 CG ARG 29 -2.317 41.523 22.270 1.00 2.44 C ATOM 406 CD ARG 29 -3.681 41.594 21.560 1.00 2.44 C ATOM 409 NE ARG 29 -4.364 40.291 21.513 1.00 2.44 N ATOM 411 CZ ARG 29 -5.461 40.026 20.830 1.00 2.44 C ATOM 412 NH1 ARG 29 -5.760 38.798 20.558 1.00 2.44 N ATOM 415 NH2 ARG 29 -6.291 40.940 20.433 1.00 2.44 N ATOM 418 C ARG 29 -1.368 41.666 19.152 1.00 2.44 C ATOM 419 O ARG 29 -1.220 42.800 19.614 1.00 2.44 O ATOM 420 N VAL 30 -1.679 41.454 17.867 1.00 1.83 N ATOM 422 CA VAL 30 -2.436 42.513 17.183 1.00 1.83 C ATOM 424 CB VAL 30 -2.046 42.715 15.709 1.00 1.83 C ATOM 426 CG1 VAL 30 -0.631 43.287 15.580 1.00 1.83 C ATOM 430 CG2 VAL 30 -2.158 41.451 14.865 1.00 1.83 C ATOM 434 C VAL 30 -3.936 42.235 17.409 1.00 1.83 C ATOM 435 O VAL 30 -4.317 41.318 18.140 1.00 1.83 O ATOM 436 N THR 31 -4.834 43.033 16.831 1.00 2.21 N ATOM 438 CA THR 31 -6.277 42.750 16.950 1.00 2.21 C ATOM 440 CB THR 31 -7.125 43.934 16.449 1.00 2.21 C ATOM 442 CG2 THR 31 -8.537 43.963 17.035 1.00 2.21 C ATOM 446 OG1 THR 31 -6.552 45.190 16.744 1.00 2.21 O ATOM 448 C THR 31 -6.664 41.496 16.148 1.00 2.21 C ATOM 449 O THR 31 -5.856 41.017 15.357 1.00 2.21 O ATOM 450 N GLU 32 -7.920 41.052 16.290 1.00 3.69 N ATOM 452 CA GLU 32 -8.636 39.881 15.731 1.00 3.69 C ATOM 454 CB GLU 32 -9.965 39.722 16.516 1.00 3.69 C ATOM 457 CG GLU 32 -9.921 38.920 17.825 1.00 3.69 C ATOM 460 CD GLU 32 -9.238 39.613 19.009 1.00 3.69 C ATOM 461 OE1 GLU 32 -8.720 38.889 19.889 1.00 3.69 O ATOM 462 OE2 GLU 32 -9.173 40.863 19.064 1.00 3.69 O ATOM 463 C GLU 32 -8.910 39.921 14.197 1.00 3.69 C ATOM 464 O GLU 32 -9.969 39.519 13.707 1.00 3.69 O ATOM 465 N ARG 33 -7.929 40.321 13.391 1.00 2.58 N ATOM 467 CA ARG 33 -8.044 40.904 12.058 1.00 2.58 C ATOM 469 CB ARG 33 -8.549 42.360 12.147 1.00 2.58 C ATOM 472 CG ARG 33 -9.840 42.575 12.969 1.00 2.58 C ATOM 475 CD ARG 33 -11.130 42.062 12.313 1.00 2.58 C ATOM 478 NE ARG 33 -12.269 42.117 13.259 1.00 2.58 N ATOM 480 CZ ARG 33 -13.082 41.131 13.615 1.00 2.58 C ATOM 481 NH1 ARG 33 -14.161 41.400 14.293 1.00 2.58 N ATOM 484 NH2 ARG 33 -12.865 39.874 13.355 1.00 2.58 N ATOM 487 C ARG 33 -6.660 40.790 11.377 1.00 2.58 C ATOM 488 O ARG 33 -5.778 41.653 11.532 1.00 2.58 O ATOM 489 N PRO 34 -6.405 39.675 10.669 1.00 2.25 N ATOM 490 CD PRO 34 -7.340 38.627 10.270 1.00 2.25 C ATOM 493 CG PRO 34 -6.582 37.747 9.283 1.00 2.25 C ATOM 496 CB PRO 34 -5.141 37.878 9.760 1.00 2.25 C ATOM 499 CA PRO 34 -5.037 39.299 10.316 1.00 2.25 C ATOM 501 C PRO 34 -4.390 40.286 9.330 1.00 2.25 C ATOM 502 O PRO 34 -3.172 40.280 9.182 1.00 2.25 O ATOM 503 N PHE 35 -5.183 41.087 8.596 1.00 1.90 N ATOM 505 CA PHE 35 -4.792 42.414 8.104 1.00 1.90 C ATOM 507 CB PHE 35 -5.968 43.382 8.314 1.00 1.90 C ATOM 510 CG PHE 35 -6.165 44.376 7.185 1.00 1.90 C ATOM 511 CD1 PHE 35 -7.049 44.074 6.129 1.00 1.90 C ATOM 513 CE1 PHE 35 -7.356 45.046 5.163 1.00 1.90 C ATOM 515 CZ PHE 35 -6.741 46.310 5.216 1.00 1.90 C ATOM 517 CE2 PHE 35 -5.840 46.608 6.254 1.00 1.90 C ATOM 519 CD2 PHE 35 -5.535 45.635 7.222 1.00 1.90 C ATOM 521 C PHE 35 -3.493 42.963 8.746 1.00 1.90 C ATOM 522 O PHE 35 -2.622 43.489 8.054 1.00 1.90 O ATOM 523 N TRP 36 -3.347 42.866 10.071 1.00 1.89 N ATOM 525 CA TRP 36 -2.274 43.530 10.821 1.00 1.89 C ATOM 527 CB TRP 36 -2.718 43.810 12.261 1.00 1.89 C ATOM 530 CG TRP 36 -4.014 44.535 12.497 1.00 1.89 C ATOM 531 CD1 TRP 36 -4.886 44.190 13.469 1.00 1.89 C ATOM 533 NE1 TRP 36 -5.853 45.160 13.609 1.00 1.89 N ATOM 535 CE2 TRP 36 -5.702 46.157 12.671 1.00 1.89 C ATOM 536 CZ2 TRP 36 -6.434 47.322 12.402 1.00 1.89 C ATOM 538 CH2 TRP 36 -6.056 48.129 11.316 1.00 1.89 C ATOM 540 CZ3 TRP 36 -4.945 47.772 10.534 1.00 1.89 C ATOM 542 CE3 TRP 36 -4.208 46.607 10.820 1.00 1.89 C ATOM 544 CD2 TRP 36 -4.560 45.762 11.902 1.00 1.89 C ATOM 545 C TRP 36 -0.995 42.693 10.818 1.00 1.89 C ATOM 546 O TRP 36 0.104 43.264 10.800 1.00 1.89 O ATOM 547 N ILE 37 -1.107 41.355 10.765 1.00 1.61 N ATOM 549 CA ILE 37 0.146 40.558 10.769 1.00 1.61 C ATOM 551 CB ILE 37 -0.036 39.103 11.216 1.00 1.61 C ATOM 553 CG2 ILE 37 1.237 38.294 10.908 1.00 1.61 C ATOM 557 CG1 ILE 37 -0.325 39.001 12.716 1.00 1.61 C ATOM 560 CD1 ILE 37 0.818 39.450 13.635 1.00 1.61 C ATOM 564 C ILE 37 0.880 40.632 9.415 1.00 1.61 C ATOM 565 O ILE 37 2.107 40.650 9.382 1.00 1.61 O ATOM 566 N SER 38 0.153 40.578 8.301 1.00 1.92 N ATOM 568 CA SER 38 0.616 40.977 6.958 1.00 1.92 C ATOM 570 CB SER 38 -0.587 41.115 6.012 1.00 1.92 C ATOM 573 OG SER 38 -1.411 39.969 6.038 1.00 1.92 O ATOM 575 C SER 38 1.377 42.319 6.918 1.00 1.92 C ATOM 576 O SER 38 1.788 42.799 5.855 1.00 1.92 O ATOM 577 N SER 39 1.639 42.926 8.075 1.00 2.24 N ATOM 579 CA SER 39 2.543 44.065 8.220 1.00 2.24 C ATOM 581 CB SER 39 1.871 45.182 9.027 1.00 2.24 C ATOM 584 OG SER 39 0.724 45.674 8.358 1.00 2.24 O ATOM 586 C SER 39 3.859 43.634 8.891 1.00 2.24 C ATOM 587 O SER 39 4.942 44.125 8.547 1.00 2.24 O ATOM 588 N PHE 40 3.783 42.669 9.816 1.00 1.69 N ATOM 590 CA PHE 40 4.910 42.391 10.714 1.00 1.69 C ATOM 592 CB PHE 40 4.397 41.941 12.096 1.00 1.69 C ATOM 595 CG PHE 40 4.103 43.088 13.066 1.00 1.69 C ATOM 596 CD1 PHE 40 3.123 44.060 12.780 1.00 1.69 C ATOM 598 CE1 PHE 40 2.819 45.071 13.712 1.00 1.69 C ATOM 600 CZ PHE 40 3.492 45.121 14.947 1.00 1.69 C ATOM 602 CE2 PHE 40 4.469 44.156 15.245 1.00 1.69 C ATOM 604 CD2 PHE 40 4.787 43.165 14.298 1.00 1.69 C ATOM 606 C PHE 40 5.937 41.435 10.060 1.00 1.69 C ATOM 607 O PHE 40 7.100 41.796 9.830 1.00 1.69 O ATOM 608 N ILE 41 5.485 40.277 9.577 1.00 1.79 N ATOM 610 CA ILE 41 6.205 39.642 8.480 1.00 1.79 C ATOM 612 CB ILE 41 5.684 38.242 8.117 1.00 1.79 C ATOM 614 CG2 ILE 41 6.705 37.656 7.103 1.00 1.79 C ATOM 618 CG1 ILE 41 5.368 37.330 9.336 1.00 1.79 C ATOM 621 CD1 ILE 41 6.568 36.645 9.987 1.00 1.79 C ATOM 625 C ILE 41 6.095 40.557 7.256 1.00 1.79 C ATOM 626 O ILE 41 5.068 41.181 6.996 1.00 1.79 O ATOM 627 N GLY 42 7.193 40.689 6.539 1.00 4.27 N ATOM 629 CA GLY 42 7.405 41.687 5.518 1.00 4.27 C ATOM 632 C GLY 42 8.200 42.892 5.999 1.00 4.27 C ATOM 633 O GLY 42 8.893 43.453 5.152 1.00 4.27 O ATOM 634 N ARG 43 8.101 43.346 7.272 1.00 5.40 N ATOM 636 CA ARG 43 8.988 44.430 7.755 1.00 5.40 C ATOM 638 CB ARG 43 8.199 45.647 8.302 1.00 5.40 C ATOM 641 CG ARG 43 6.943 46.195 7.565 1.00 5.40 C ATOM 644 CD ARG 43 6.895 46.213 6.025 1.00 5.40 C ATOM 647 NE ARG 43 5.509 46.295 5.491 1.00 5.40 N ATOM 649 CZ ARG 43 4.675 45.280 5.304 1.00 5.40 C ATOM 650 NH1 ARG 43 3.527 45.419 4.709 1.00 5.40 N ATOM 653 NH2 ARG 43 4.916 44.088 5.742 1.00 5.40 N ATOM 656 C ARG 43 10.033 43.918 8.753 1.00 5.40 C ATOM 657 O ARG 43 9.692 43.688 9.901 1.00 5.40 O ATOM 658 N SER 44 11.297 43.840 8.322 1.00 6.87 N ATOM 660 CA SER 44 12.550 43.522 9.055 1.00 6.87 C ATOM 662 CB SER 44 13.654 43.403 7.998 1.00 6.87 C ATOM 665 OG SER 44 13.824 44.612 7.290 1.00 6.87 O ATOM 667 C SER 44 12.962 44.553 10.152 1.00 6.87 C ATOM 668 O SER 44 14.106 45.004 10.160 1.00 6.87 O ATOM 669 N LYS 45 12.031 45.018 11.004 1.00 5.09 N ATOM 671 CA LYS 45 12.066 46.322 11.727 1.00 5.09 C ATOM 673 CB LYS 45 10.790 46.525 12.562 1.00 5.09 C ATOM 676 CG LYS 45 9.460 46.700 11.827 1.00 5.09 C ATOM 679 CD LYS 45 8.346 46.845 12.874 1.00 5.09 C ATOM 682 CE LYS 45 6.962 46.706 12.234 1.00 5.09 C ATOM 685 NZ LYS 45 5.922 46.570 13.279 1.00 5.09 N ATOM 689 C LYS 45 13.250 46.599 12.665 1.00 5.09 C ATOM 690 O LYS 45 13.938 47.606 12.523 1.00 5.09 O TER END