####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name S0953s2TS196_2-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name S0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap S0953s2TS196_2-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 44 2 - 45 4.62 4.62 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 15 9 - 23 1.99 7.43 LONGEST_CONTINUOUS_SEGMENT: 15 10 - 24 1.98 6.87 LCS_AVERAGE: 27.58 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 20 - 31 0.39 6.40 LCS_AVERAGE: 16.63 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 4 44 0 3 3 8 12 19 25 29 34 37 39 39 41 42 42 42 43 43 43 43 LCS_GDT V 3 V 3 3 8 44 3 4 6 7 11 18 23 27 34 37 39 39 41 42 42 42 43 43 43 43 LCS_GDT Q 4 Q 4 3 8 44 3 3 4 7 13 21 28 32 35 37 39 39 41 42 42 42 43 43 43 43 LCS_GDT G 5 G 5 4 8 44 3 4 9 14 20 23 28 33 35 37 39 39 41 42 42 42 43 43 43 43 LCS_GDT P 6 P 6 4 8 44 3 3 4 8 13 17 26 32 35 37 39 39 41 42 42 42 43 43 43 43 LCS_GDT W 7 W 7 4 8 44 3 4 4 6 8 14 19 26 31 37 39 39 41 42 42 42 43 43 43 43 LCS_GDT V 8 V 8 4 10 44 3 4 5 8 18 22 29 33 35 37 39 39 41 42 42 42 43 43 43 43 LCS_GDT G 9 G 9 9 15 44 8 13 13 14 17 21 29 33 35 37 39 39 41 42 42 42 43 43 43 43 LCS_GDT S 10 S 10 9 15 44 8 8 13 14 20 23 29 33 35 37 39 39 41 42 42 42 43 43 43 43 LCS_GDT S 11 S 11 9 15 44 8 8 10 12 19 23 29 33 35 37 39 39 41 42 42 42 43 43 43 43 LCS_GDT Y 12 Y 12 9 15 44 8 8 10 12 17 23 29 33 35 37 39 39 41 42 42 42 43 43 43 43 LCS_GDT V 13 V 13 9 15 44 8 8 13 14 20 23 29 33 35 37 39 39 41 42 42 42 43 43 43 43 LCS_GDT A 14 A 14 9 15 44 8 8 10 10 16 22 29 33 35 37 39 39 41 42 42 42 43 43 43 43 LCS_GDT E 15 E 15 9 15 44 8 8 10 11 16 19 26 33 35 37 39 39 41 42 42 42 43 43 43 43 LCS_GDT T 16 T 16 9 15 44 8 8 10 12 20 23 29 33 35 37 39 39 41 42 42 42 43 43 43 43 LCS_GDT G 17 G 17 9 15 44 4 5 10 12 20 23 29 33 35 37 39 39 41 42 42 42 43 43 43 43 LCS_GDT Q 18 Q 18 3 15 44 3 3 3 7 14 19 29 33 35 37 39 39 41 42 42 42 43 43 43 43 LCS_GDT N 19 N 19 3 15 44 3 3 5 9 20 23 29 33 35 37 39 39 41 42 42 42 43 43 43 43 LCS_GDT W 20 W 20 12 15 44 10 13 13 14 17 22 29 33 35 37 39 39 41 42 42 42 43 43 43 43 LCS_GDT A 21 A 21 12 15 44 10 13 13 14 20 23 29 33 35 37 39 39 41 42 42 42 43 43 43 43 LCS_GDT S 22 S 22 12 15 44 10 13 13 14 20 23 29 33 35 37 39 39 41 42 42 42 43 43 43 43 LCS_GDT L 23 L 23 12 15 44 10 13 13 14 20 23 29 33 35 37 39 39 41 42 42 42 43 43 43 43 LCS_GDT A 24 A 24 12 15 44 10 13 13 14 20 23 29 33 35 37 39 39 41 42 42 42 43 43 43 43 LCS_GDT A 25 A 25 12 14 44 10 13 13 14 20 23 29 33 35 37 39 39 41 42 42 42 43 43 43 43 LCS_GDT N 26 N 26 12 14 44 10 13 13 14 20 23 29 33 35 37 39 39 41 42 42 42 43 43 43 43 LCS_GDT E 27 E 27 12 14 44 10 13 13 14 20 23 29 33 35 37 39 39 41 42 42 42 43 43 43 43 LCS_GDT L 28 L 28 12 14 44 10 13 13 14 20 23 29 33 35 37 39 39 41 42 42 42 43 43 43 43 LCS_GDT R 29 R 29 12 14 44 10 13 13 14 20 23 29 33 35 37 39 39 41 42 42 42 43 43 43 43 LCS_GDT V 30 V 30 12 14 44 7 13 13 14 20 23 29 33 35 37 39 39 41 42 42 42 43 43 43 43 LCS_GDT T 31 T 31 12 14 44 8 13 13 14 20 23 29 33 35 37 39 39 41 42 42 42 43 43 43 43 LCS_GDT E 32 E 32 3 14 44 3 3 3 5 5 12 15 23 30 34 39 39 41 42 42 42 43 43 43 43 LCS_GDT R 33 R 33 3 14 44 3 3 3 10 16 19 26 33 35 37 39 39 41 42 42 42 43 43 43 43 LCS_GDT P 34 P 34 3 7 44 2 3 4 5 7 13 15 23 26 31 34 38 41 42 42 42 43 43 43 43 LCS_GDT F 35 F 35 3 7 44 3 5 5 14 17 23 29 33 35 37 39 39 41 42 42 42 43 43 43 43 LCS_GDT W 36 W 36 6 10 44 4 5 6 12 16 22 29 33 35 37 39 39 41 42 42 42 43 43 43 43 LCS_GDT I 37 I 37 6 10 44 4 5 7 12 16 20 29 33 35 37 39 39 41 42 42 42 43 43 43 43 LCS_GDT S 38 S 38 6 10 44 4 5 6 10 20 23 29 33 35 37 39 39 41 42 42 42 43 43 43 43 LCS_GDT S 39 S 39 6 10 44 4 5 10 12 20 23 29 33 35 37 39 39 41 42 42 42 43 43 43 43 LCS_GDT F 40 F 40 6 10 44 4 5 6 8 11 21 28 33 35 37 39 39 41 42 42 42 43 43 43 43 LCS_GDT I 41 I 41 6 10 44 4 5 6 14 20 23 29 33 35 37 39 39 41 42 42 42 43 43 43 43 LCS_GDT G 42 G 42 6 10 44 3 5 6 8 11 11 12 27 31 35 38 39 41 42 42 42 43 43 43 43 LCS_GDT R 43 R 43 6 10 44 3 5 6 8 11 11 12 16 20 27 29 39 41 42 42 42 43 43 43 43 LCS_GDT S 44 S 44 6 10 44 0 3 6 8 11 11 12 15 18 19 24 25 32 36 39 42 43 43 43 43 LCS_GDT K 45 K 45 0 10 44 0 0 4 7 11 11 12 12 14 17 20 21 27 29 30 35 38 38 39 42 LCS_AVERAGE LCS_A: 48.07 ( 16.63 27.58 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 13 13 14 20 23 29 33 35 37 39 39 41 42 42 42 43 43 43 43 GDT PERCENT_AT 22.73 29.55 29.55 31.82 45.45 52.27 65.91 75.00 79.55 84.09 88.64 88.64 93.18 95.45 95.45 95.45 97.73 97.73 97.73 97.73 GDT RMS_LOCAL 0.27 0.43 0.43 1.18 1.93 2.09 2.57 2.76 2.90 3.08 3.29 3.29 3.57 3.79 3.79 3.79 4.11 4.11 4.11 4.11 GDT RMS_ALL_AT 6.43 6.35 6.35 5.47 5.00 5.06 5.36 5.23 5.07 4.91 4.91 4.91 4.81 4.73 4.73 4.73 4.65 4.65 4.65 4.65 # Checking swapping # possible swapping detected: E 15 E 15 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 6.563 0 0.427 0.437 7.304 0.000 0.000 - LGA V 3 V 3 5.743 0 0.236 1.069 6.656 0.000 0.000 6.656 LGA Q 4 Q 4 4.641 0 0.127 0.198 8.110 10.000 4.444 6.379 LGA G 5 G 5 2.938 0 0.220 0.220 5.636 12.727 12.727 - LGA P 6 P 6 5.215 0 0.062 0.142 6.968 0.000 0.000 6.968 LGA W 7 W 7 6.604 0 0.205 1.270 12.978 1.818 0.519 12.865 LGA V 8 V 8 3.390 0 0.398 1.043 6.141 31.364 20.260 3.544 LGA G 9 G 9 4.088 0 0.552 0.552 4.088 21.818 21.818 - LGA S 10 S 10 1.700 0 0.110 0.104 2.304 59.091 56.667 1.394 LGA S 11 S 11 2.445 0 0.079 0.787 4.974 42.273 29.394 4.974 LGA Y 12 Y 12 2.759 0 0.081 0.806 10.065 39.091 13.939 10.065 LGA V 13 V 13 1.746 0 0.090 1.091 6.182 51.364 35.844 6.182 LGA A 14 A 14 3.295 0 0.044 0.059 4.526 20.455 18.545 - LGA E 15 E 15 3.962 0 0.015 1.176 6.356 13.182 6.465 5.828 LGA T 16 T 16 1.682 0 0.104 0.235 2.318 51.364 53.506 1.047 LGA G 17 G 17 2.087 0 0.640 0.640 3.190 36.364 36.364 - LGA Q 18 Q 18 3.630 0 0.612 0.458 8.207 14.545 6.465 8.156 LGA N 19 N 19 2.847 0 0.448 1.361 9.203 38.636 19.545 7.157 LGA W 20 W 20 3.282 0 0.507 1.152 10.432 34.545 9.870 10.416 LGA A 21 A 21 1.696 0 0.028 0.045 2.057 51.364 54.182 - LGA S 22 S 22 1.384 0 0.024 0.594 1.936 61.818 58.182 1.936 LGA L 23 L 23 1.893 0 0.054 1.403 6.415 50.909 29.773 4.464 LGA A 24 A 24 2.133 0 0.057 0.059 2.387 47.727 45.818 - LGA A 25 A 25 1.111 0 0.054 0.052 1.759 61.818 65.818 - LGA N 26 N 26 0.870 0 0.043 0.489 1.548 70.000 74.318 0.780 LGA E 27 E 27 1.867 0 0.020 1.403 7.213 44.545 24.646 7.213 LGA L 28 L 28 2.736 0 0.058 1.403 6.257 27.727 17.273 6.257 LGA R 29 R 29 2.460 0 0.055 1.879 12.159 35.455 14.545 12.159 LGA V 30 V 30 2.316 0 0.231 1.113 2.949 41.364 36.883 2.407 LGA T 31 T 31 2.238 0 0.704 0.780 6.001 30.455 18.961 4.076 LGA E 32 E 32 6.491 0 0.444 1.110 10.939 0.455 0.202 10.479 LGA R 33 R 33 4.206 0 0.098 0.986 7.530 1.364 11.240 5.223 LGA P 34 P 34 6.709 0 0.625 0.600 8.151 0.000 0.000 8.151 LGA F 35 F 35 3.086 0 0.648 1.164 9.915 24.545 9.421 9.915 LGA W 36 W 36 3.656 0 0.623 0.611 8.904 26.818 7.662 8.601 LGA I 37 I 37 3.740 0 0.050 0.839 7.453 26.364 13.182 7.453 LGA S 38 S 38 2.563 0 0.103 0.571 6.084 28.636 20.000 6.084 LGA S 39 S 39 2.680 0 0.200 0.733 5.196 27.727 24.848 3.945 LGA F 40 F 40 3.682 0 0.113 0.344 11.161 17.727 6.612 10.807 LGA I 41 I 41 2.128 0 0.130 0.547 5.766 26.364 17.045 5.766 LGA G 42 G 42 8.554 0 0.129 0.129 11.824 0.000 0.000 - LGA R 43 R 43 10.753 0 0.269 1.404 14.265 0.000 0.000 14.265 LGA S 44 S 44 13.650 0 0.520 0.873 16.670 0.000 0.000 15.125 LGA K 45 K 45 17.889 0 0.693 0.685 21.083 0.000 0.000 21.083 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 4.620 4.618 6.263 26.860 20.386 9.610 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 33 2.76 57.955 53.417 1.155 LGA_LOCAL RMSD: 2.757 Number of atoms: 33 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 5.226 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 4.620 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.081984 * X + 0.994824 * Y + -0.060026 * Z + -10.658520 Y_new = 0.094131 * X + -0.067688 * Y + -0.993256 * Z + 50.536797 Z_new = -0.992178 * X + 0.075781 * Y + -0.099193 * Z + 26.562292 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.854263 1.445642 2.489211 [DEG: 48.9456 82.8292 142.6213 ] ZXZ: -0.060360 1.670153 -1.494566 [DEG: -3.4584 95.6927 -85.6323 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: S0953s2TS196_2-D1 REMARK 2: S0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap S0953s2TS196_2-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 33 2.76 53.417 4.62 REMARK ---------------------------------------------------------- MOLECULE S0953s2TS196_2-D1 PFRMAT TS TARGET S0953s2 MODEL 2 PARENT N/A ATOM 17 N ALA 2 10.122 40.791 10.770 1.00 4.40 N ATOM 19 CA ALA 2 10.104 41.504 9.488 1.00 4.40 C ATOM 21 CB ALA 2 9.989 43.020 9.722 1.00 4.40 C ATOM 25 C ALA 2 11.003 41.015 8.338 1.00 4.40 C ATOM 26 O ALA 2 11.932 41.717 7.966 1.00 4.40 O ATOM 27 N VAL 3 10.698 39.874 7.721 1.00 5.43 N ATOM 29 CA VAL 3 11.522 39.207 6.670 1.00 5.43 C ATOM 31 CB VAL 3 11.902 37.777 7.065 1.00 5.43 C ATOM 33 CG1 VAL 3 12.661 37.724 8.395 1.00 5.43 C ATOM 37 CG2 VAL 3 10.719 36.810 7.084 1.00 5.43 C ATOM 41 C VAL 3 10.889 39.347 5.278 1.00 5.43 C ATOM 42 O VAL 3 10.062 40.225 5.083 1.00 5.43 O ATOM 43 N GLN 4 11.227 38.448 4.320 1.00 5.14 N ATOM 45 CA GLN 4 10.835 38.659 2.908 1.00 5.14 C ATOM 47 CB GLN 4 11.909 38.118 1.958 1.00 5.14 C ATOM 50 CG GLN 4 13.283 38.792 2.133 1.00 5.14 C ATOM 53 CD GLN 4 14.389 38.043 1.410 1.00 5.14 C ATOM 54 OE1 GLN 4 14.391 36.819 1.362 1.00 5.14 O ATOM 55 NE2 GLN 4 15.381 38.725 0.900 1.00 5.14 N ATOM 58 C GLN 4 9.485 37.998 2.589 1.00 5.14 C ATOM 59 O GLN 4 9.329 36.785 2.762 1.00 5.14 O ATOM 60 N GLY 5 8.514 38.851 2.136 1.00 4.21 N ATOM 62 CA GLY 5 7.240 38.435 1.525 1.00 4.21 C ATOM 65 C GLY 5 6.013 39.148 2.130 1.00 4.21 C ATOM 66 O GLY 5 5.759 38.953 3.314 1.00 4.21 O ATOM 67 N PRO 6 5.198 39.913 1.364 1.00 3.29 N ATOM 68 CD PRO 6 5.347 40.185 -0.058 1.00 3.29 C ATOM 71 CG PRO 6 4.092 40.953 -0.466 1.00 3.29 C ATOM 74 CB PRO 6 3.717 41.707 0.811 1.00 3.29 C ATOM 77 CA PRO 6 4.127 40.745 1.933 1.00 3.29 C ATOM 79 C PRO 6 2.913 39.995 2.501 1.00 3.29 C ATOM 80 O PRO 6 2.233 40.531 3.367 1.00 3.29 O ATOM 81 N TRP 7 2.649 38.764 2.069 1.00 4.43 N ATOM 83 CA TRP 7 1.736 37.862 2.778 1.00 4.43 C ATOM 85 CB TRP 7 1.103 36.865 1.787 1.00 4.43 C ATOM 88 CG TRP 7 0.299 35.752 2.400 1.00 4.43 C ATOM 89 CD1 TRP 7 0.789 34.541 2.753 1.00 4.43 C ATOM 91 NE1 TRP 7 -0.221 33.754 3.271 1.00 4.43 N ATOM 93 CE2 TRP 7 -1.428 34.420 3.266 1.00 4.43 C ATOM 94 CZ2 TRP 7 -2.711 34.075 3.718 1.00 4.43 C ATOM 96 CH2 TRP 7 -3.755 35.004 3.575 1.00 4.43 C ATOM 98 CZ3 TRP 7 -3.506 36.258 2.989 1.00 4.43 C ATOM 100 CE3 TRP 7 -2.211 36.598 2.550 1.00 4.43 C ATOM 102 CD2 TRP 7 -1.134 35.694 2.689 1.00 4.43 C ATOM 103 C TRP 7 2.530 37.151 3.876 1.00 4.43 C ATOM 104 O TRP 7 3.229 36.180 3.594 1.00 4.43 O ATOM 105 N VAL 8 2.455 37.692 5.099 1.00 2.62 N ATOM 107 CA VAL 8 2.514 36.965 6.387 1.00 2.62 C ATOM 109 CB VAL 8 1.081 36.888 6.980 1.00 2.62 C ATOM 111 CG1 VAL 8 0.021 36.375 5.995 1.00 2.62 C ATOM 115 CG2 VAL 8 0.907 36.122 8.293 1.00 2.62 C ATOM 119 C VAL 8 3.281 35.637 6.376 1.00 2.62 C ATOM 120 O VAL 8 2.805 34.598 6.815 1.00 2.62 O ATOM 121 N GLY 9 4.525 35.704 5.908 1.00 2.85 N ATOM 123 CA GLY 9 5.720 35.018 6.401 1.00 2.85 C ATOM 126 C GLY 9 5.634 33.525 6.312 1.00 2.85 C ATOM 127 O GLY 9 5.585 32.913 7.360 1.00 2.85 O ATOM 128 N SER 10 5.649 32.960 5.118 1.00 2.54 N ATOM 130 CA SER 10 5.222 31.577 4.868 1.00 2.54 C ATOM 132 CB SER 10 5.551 31.199 3.417 1.00 2.54 C ATOM 135 OG SER 10 6.897 31.534 3.108 1.00 2.54 O ATOM 137 C SER 10 5.840 30.545 5.820 1.00 2.54 C ATOM 138 O SER 10 5.131 29.702 6.365 1.00 2.54 O ATOM 139 N SER 11 7.141 30.652 6.108 1.00 2.29 N ATOM 141 CA SER 11 7.775 29.845 7.149 1.00 2.29 C ATOM 143 CB SER 11 9.281 29.767 7.021 1.00 2.29 C ATOM 146 OG SER 11 9.786 29.913 5.696 1.00 2.29 O ATOM 148 C SER 11 7.304 30.177 8.578 1.00 2.29 C ATOM 149 O SER 11 6.793 29.281 9.224 1.00 2.29 O ATOM 150 N TYR 12 7.342 31.426 9.054 1.00 1.71 N ATOM 152 CA TYR 12 6.774 31.863 10.343 1.00 1.71 C ATOM 154 CB TYR 12 6.763 33.392 10.366 1.00 1.71 C ATOM 157 CG TYR 12 5.986 34.009 11.496 1.00 1.71 C ATOM 158 CD1 TYR 12 6.194 33.570 12.815 1.00 1.71 C ATOM 160 CE1 TYR 12 5.485 34.157 13.870 1.00 1.71 C ATOM 162 CZ TYR 12 4.579 35.191 13.599 1.00 1.71 C ATOM 163 OH TYR 12 3.811 35.705 14.571 1.00 1.71 O ATOM 165 CE2 TYR 12 4.413 35.672 12.290 1.00 1.71 C ATOM 167 CD2 TYR 12 5.098 35.067 11.229 1.00 1.71 C ATOM 169 C TYR 12 5.380 31.264 10.657 1.00 1.71 C ATOM 170 O TYR 12 5.128 30.763 11.758 1.00 1.71 O ATOM 171 N VAL 13 4.439 31.342 9.712 1.00 1.51 N ATOM 173 CA VAL 13 3.113 30.751 9.891 1.00 1.51 C ATOM 175 CB VAL 13 2.087 31.272 8.885 1.00 1.51 C ATOM 177 CG1 VAL 13 1.770 32.738 9.155 1.00 1.51 C ATOM 181 CG2 VAL 13 2.461 31.117 7.412 1.00 1.51 C ATOM 185 C VAL 13 3.106 29.226 9.859 1.00 1.51 C ATOM 186 O VAL 13 2.290 28.635 10.557 1.00 1.51 O ATOM 187 N ALA 14 3.990 28.552 9.119 1.00 1.93 N ATOM 189 CA ALA 14 4.142 27.105 9.262 1.00 1.93 C ATOM 191 CB ALA 14 5.102 26.580 8.187 1.00 1.93 C ATOM 195 C ALA 14 4.566 26.716 10.693 1.00 1.93 C ATOM 196 O ALA 14 3.948 25.841 11.308 1.00 1.93 O ATOM 197 N GLU 15 5.575 27.388 11.203 1.00 2.13 N ATOM 199 CA GLU 15 6.313 27.167 12.456 1.00 2.13 C ATOM 201 CB GLU 15 7.472 28.164 12.520 1.00 2.13 C ATOM 204 CG GLU 15 8.538 27.860 11.491 1.00 2.13 C ATOM 207 CD GLU 15 9.540 28.999 11.399 1.00 2.13 C ATOM 208 OE1 GLU 15 10.154 29.290 12.449 1.00 2.13 O ATOM 209 OE2 GLU 15 9.753 29.567 10.302 1.00 2.13 O ATOM 210 C GLU 15 5.457 27.419 13.697 1.00 2.13 C ATOM 211 O GLU 15 5.558 26.679 14.674 1.00 2.13 O ATOM 212 N THR 16 4.607 28.453 13.617 1.00 2.03 N ATOM 214 CA THR 16 3.560 28.704 14.614 1.00 2.03 C ATOM 216 CB THR 16 3.113 30.177 14.647 1.00 2.03 C ATOM 218 CG2 THR 16 4.189 31.082 15.235 1.00 2.03 C ATOM 222 OG1 THR 16 2.826 30.676 13.363 1.00 2.03 O ATOM 224 C THR 16 2.338 27.792 14.448 1.00 2.03 C ATOM 225 O THR 16 1.744 27.391 15.451 1.00 2.03 O ATOM 226 N GLY 17 1.960 27.402 13.219 1.00 2.28 N ATOM 228 CA GLY 17 0.928 26.398 12.948 1.00 2.28 C ATOM 231 C GLY 17 -0.093 26.767 11.862 1.00 2.28 C ATOM 232 O GLY 17 -0.319 27.922 11.520 1.00 2.28 O ATOM 233 N GLN 18 -0.789 25.748 11.342 1.00 2.62 N ATOM 235 CA GLN 18 -1.447 25.778 10.022 1.00 2.62 C ATOM 237 CB GLN 18 -1.535 24.354 9.431 1.00 2.62 C ATOM 240 CG GLN 18 -0.264 23.483 9.586 1.00 2.62 C ATOM 243 CD GLN 18 1.055 24.238 9.402 1.00 2.62 C ATOM 244 OE1 GLN 18 1.272 24.944 8.430 1.00 2.62 O ATOM 245 NE2 GLN 18 1.997 24.046 10.301 1.00 2.62 N ATOM 248 C GLN 18 -2.785 26.558 9.937 1.00 2.62 C ATOM 249 O GLN 18 -3.497 26.449 8.943 1.00 2.62 O ATOM 250 N ASN 19 -3.125 27.370 10.936 1.00 2.70 N ATOM 252 CA ASN 19 -4.246 28.332 10.894 1.00 2.70 C ATOM 254 CB ASN 19 -5.078 28.195 12.186 1.00 2.70 C ATOM 257 CG ASN 19 -6.380 28.986 12.153 1.00 2.70 C ATOM 258 OD1 ASN 19 -6.844 29.447 11.125 1.00 2.70 O ATOM 259 ND2 ASN 19 -7.042 29.142 13.278 1.00 2.70 N ATOM 262 C ASN 19 -3.683 29.753 10.644 1.00 2.70 C ATOM 263 O ASN 19 -3.862 30.692 11.430 1.00 2.70 O ATOM 264 N TRP 20 -2.882 29.825 9.571 1.00 1.98 N ATOM 266 CA TRP 20 -1.695 30.664 9.399 1.00 1.98 C ATOM 268 CB TRP 20 -1.360 30.696 7.891 1.00 1.98 C ATOM 271 CG TRP 20 -0.679 29.487 7.304 1.00 1.98 C ATOM 272 CD1 TRP 20 -0.029 28.515 7.991 1.00 1.98 C ATOM 274 NE1 TRP 20 0.482 27.579 7.115 1.00 1.98 N ATOM 276 CE2 TRP 20 0.236 27.922 5.805 1.00 1.98 C ATOM 277 CZ2 TRP 20 0.562 27.319 4.580 1.00 1.98 C ATOM 279 CH2 TRP 20 0.184 27.957 3.385 1.00 1.98 C ATOM 281 CZ3 TRP 20 -0.511 29.178 3.433 1.00 1.98 C ATOM 283 CE3 TRP 20 -0.844 29.766 4.671 1.00 1.98 C ATOM 285 CD2 TRP 20 -0.490 29.148 5.892 1.00 1.98 C ATOM 286 C TRP 20 -1.719 32.051 10.050 1.00 1.98 C ATOM 287 O TRP 20 -1.132 32.260 11.110 1.00 1.98 O ATOM 288 N ALA 21 -2.453 32.980 9.450 1.00 1.37 N ATOM 290 CA ALA 21 -2.236 34.402 9.678 1.00 1.37 C ATOM 292 CB ALA 21 -2.617 35.112 8.376 1.00 1.37 C ATOM 296 C ALA 21 -2.970 34.947 10.920 1.00 1.37 C ATOM 297 O ALA 21 -2.469 35.845 11.602 1.00 1.37 O ATOM 298 N SER 22 -4.130 34.361 11.234 1.00 1.67 N ATOM 300 CA SER 22 -4.898 34.624 12.456 1.00 1.67 C ATOM 302 CB SER 22 -6.275 33.953 12.359 1.00 1.67 C ATOM 305 OG SER 22 -6.913 34.298 11.143 1.00 1.67 O ATOM 307 C SER 22 -4.194 34.086 13.706 1.00 1.67 C ATOM 308 O SER 22 -4.130 34.779 14.723 1.00 1.67 O ATOM 309 N LEU 23 -3.672 32.872 13.657 1.00 1.90 N ATOM 311 CA LEU 23 -2.877 32.300 14.746 1.00 1.90 C ATOM 313 CB LEU 23 -2.468 30.865 14.374 1.00 1.90 C ATOM 316 CG LEU 23 -1.850 30.053 15.530 1.00 1.90 C ATOM 318 CD1 LEU 23 -2.868 29.760 16.637 1.00 1.90 C ATOM 322 CD2 LEU 23 -1.358 28.715 14.986 1.00 1.90 C ATOM 326 C LEU 23 -1.653 33.154 15.094 1.00 1.90 C ATOM 327 O LEU 23 -1.399 33.376 16.275 1.00 1.90 O ATOM 328 N ALA 24 -0.929 33.667 14.101 1.00 1.25 N ATOM 330 CA ALA 24 0.192 34.576 14.310 1.00 1.25 C ATOM 332 CB ALA 24 0.933 34.730 12.983 1.00 1.25 C ATOM 336 C ALA 24 -0.277 35.928 14.888 1.00 1.25 C ATOM 337 O ALA 24 0.470 36.585 15.605 1.00 1.25 O ATOM 338 N ALA 25 -1.547 36.334 14.666 1.00 1.07 N ATOM 340 CA ALA 25 -2.044 37.647 15.098 1.00 1.07 C ATOM 342 CB ALA 25 -3.225 38.040 14.196 1.00 1.07 C ATOM 346 C ALA 25 -2.419 37.699 16.587 1.00 1.07 C ATOM 347 O ALA 25 -2.172 38.703 17.277 1.00 1.07 O ATOM 348 N ASN 26 -3.053 36.630 17.056 1.00 1.72 N ATOM 350 CA ASN 26 -3.197 36.381 18.480 1.00 1.72 C ATOM 352 CB ASN 26 -4.040 35.105 18.687 1.00 1.72 C ATOM 355 CG ASN 26 -5.534 35.403 18.589 1.00 1.72 C ATOM 356 OD1 ASN 26 -6.019 36.044 17.674 1.00 1.72 O ATOM 357 ND2 ASN 26 -6.302 35.024 19.590 1.00 1.72 N ATOM 360 C ASN 26 -1.844 36.369 19.216 1.00 1.72 C ATOM 361 O ASN 26 -1.748 37.014 20.263 1.00 1.72 O ATOM 362 N GLU 27 -0.835 35.613 18.721 1.00 2.09 N ATOM 364 CA GLU 27 0.525 35.497 19.287 1.00 2.09 C ATOM 366 CB GLU 27 1.353 34.495 18.453 1.00 2.09 C ATOM 369 CG GLU 27 2.757 34.166 19.011 1.00 2.09 C ATOM 372 CD GLU 27 3.941 34.809 18.254 1.00 2.09 C ATOM 373 OE1 GLU 27 5.002 35.044 18.877 1.00 2.09 O ATOM 374 OE2 GLU 27 3.782 35.159 17.065 1.00 2.09 O ATOM 375 C GLU 27 1.247 36.844 19.383 1.00 2.09 C ATOM 376 O GLU 27 2.107 36.995 20.251 1.00 2.09 O ATOM 377 N LEU 28 0.803 37.863 18.623 1.00 2.04 N ATOM 379 CA LEU 28 1.358 39.219 18.716 1.00 2.04 C ATOM 381 CB LEU 28 1.616 39.820 17.321 1.00 2.04 C ATOM 384 CG LEU 28 2.514 41.079 17.262 1.00 2.04 C ATOM 386 CD1 LEU 28 3.845 40.940 18.008 1.00 2.04 C ATOM 390 CD2 LEU 28 2.840 41.415 15.804 1.00 2.04 C ATOM 394 C LEU 28 0.481 40.162 19.571 1.00 2.04 C ATOM 395 O LEU 28 0.839 41.319 19.805 1.00 2.04 O ATOM 396 N ARG 29 -0.660 39.658 20.099 1.00 2.44 N ATOM 398 CA ARG 29 -1.772 40.459 20.612 1.00 2.44 C ATOM 400 CB ARG 29 -1.655 40.578 22.146 1.00 2.44 C ATOM 403 CG ARG 29 -2.834 41.233 22.897 1.00 2.44 C ATOM 406 CD ARG 29 -4.235 41.003 22.303 1.00 2.44 C ATOM 409 NE ARG 29 -4.605 39.579 22.255 1.00 2.44 N ATOM 411 CZ ARG 29 -5.605 39.068 21.562 1.00 2.44 C ATOM 412 NH1 ARG 29 -5.592 37.811 21.255 1.00 2.44 N ATOM 415 NH2 ARG 29 -6.639 39.760 21.190 1.00 2.44 N ATOM 418 C ARG 29 -1.959 41.762 19.828 1.00 2.44 C ATOM 419 O ARG 29 -2.199 42.829 20.403 1.00 2.44 O ATOM 420 N VAL 30 -2.019 41.653 18.506 1.00 1.83 N ATOM 422 CA VAL 30 -3.029 42.452 17.798 1.00 1.83 C ATOM 424 CB VAL 30 -2.735 42.657 16.301 1.00 1.83 C ATOM 426 CG1 VAL 30 -1.494 43.531 16.090 1.00 1.83 C ATOM 430 CG2 VAL 30 -2.573 41.354 15.525 1.00 1.83 C ATOM 434 C VAL 30 -4.411 41.831 18.096 1.00 1.83 C ATOM 435 O VAL 30 -4.517 40.754 18.690 1.00 1.83 O ATOM 436 N THR 31 -5.531 42.493 17.671 1.00 2.21 N ATOM 438 CA THR 31 -6.800 41.747 17.553 1.00 2.21 C ATOM 440 CB THR 31 -7.980 42.690 17.240 1.00 2.21 C ATOM 442 CG2 THR 31 -9.299 42.251 17.884 1.00 2.21 C ATOM 446 OG1 THR 31 -7.757 44.019 17.667 1.00 2.21 O ATOM 448 C THR 31 -6.714 40.682 16.445 1.00 2.21 C ATOM 449 O THR 31 -5.779 40.718 15.647 1.00 2.21 O ATOM 450 N GLU 32 -7.735 39.831 16.351 1.00 3.69 N ATOM 452 CA GLU 32 -7.843 38.474 15.761 1.00 3.69 C ATOM 454 CB GLU 32 -9.065 37.770 16.419 1.00 3.69 C ATOM 457 CG GLU 32 -8.829 37.043 17.752 1.00 3.69 C ATOM 460 CD GLU 32 -8.841 37.928 19.004 1.00 3.69 C ATOM 461 OE1 GLU 32 -8.381 37.446 20.063 1.00 3.69 O ATOM 462 OE2 GLU 32 -9.330 39.084 18.965 1.00 3.69 O ATOM 463 C GLU 32 -7.950 38.413 14.207 1.00 3.69 C ATOM 464 O GLU 32 -8.847 37.790 13.633 1.00 3.69 O ATOM 465 N ARG 33 -7.084 39.102 13.460 1.00 2.58 N ATOM 467 CA ARG 33 -7.328 39.805 12.203 1.00 2.58 C ATOM 469 CB ARG 33 -7.833 41.240 12.477 1.00 2.58 C ATOM 472 CG ARG 33 -9.067 41.353 13.402 1.00 2.58 C ATOM 475 CD ARG 33 -10.349 40.692 12.874 1.00 2.58 C ATOM 478 NE ARG 33 -11.407 40.668 13.913 1.00 2.58 N ATOM 480 CZ ARG 33 -11.949 39.609 14.504 1.00 2.58 C ATOM 481 NH1 ARG 33 -12.910 39.775 15.371 1.00 2.58 N ATOM 484 NH2 ARG 33 -11.576 38.379 14.288 1.00 2.58 N ATOM 487 C ARG 33 -6.012 39.778 11.389 1.00 2.58 C ATOM 488 O ARG 33 -5.021 40.455 11.718 1.00 2.58 O ATOM 489 N PRO 34 -5.922 39.055 10.267 1.00 2.25 N ATOM 490 CD PRO 34 -7.040 38.406 9.586 1.00 2.25 C ATOM 493 CG PRO 34 -6.480 37.885 8.267 1.00 2.25 C ATOM 496 CB PRO 34 -5.023 37.603 8.612 1.00 2.25 C ATOM 499 CA PRO 34 -4.655 38.659 9.657 1.00 2.25 C ATOM 501 C PRO 34 -3.887 39.852 9.060 1.00 2.25 C ATOM 502 O PRO 34 -2.662 39.823 9.022 1.00 2.25 O ATOM 503 N PHE 35 -4.575 40.823 8.454 1.00 1.90 N ATOM 505 CA PHE 35 -3.966 41.981 7.788 1.00 1.90 C ATOM 507 CB PHE 35 -5.087 42.891 7.260 1.00 1.90 C ATOM 510 CG PHE 35 -4.634 43.896 6.217 1.00 1.90 C ATOM 511 CD1 PHE 35 -4.858 43.637 4.850 1.00 1.90 C ATOM 513 CE1 PHE 35 -4.542 44.610 3.884 1.00 1.90 C ATOM 515 CZ PHE 35 -3.963 45.831 4.278 1.00 1.90 C ATOM 517 CE2 PHE 35 -3.721 46.085 5.639 1.00 1.90 C ATOM 519 CD2 PHE 35 -4.042 45.114 6.605 1.00 1.90 C ATOM 521 C PHE 35 -2.975 42.771 8.680 1.00 1.90 C ATOM 522 O PHE 35 -1.990 43.326 8.190 1.00 1.90 O ATOM 523 N TRP 36 -3.179 42.713 10.015 1.00 1.89 N ATOM 525 CA TRP 36 -2.247 43.339 10.959 1.00 1.89 C ATOM 527 CB TRP 36 -2.811 43.289 12.385 1.00 1.89 C ATOM 530 CG TRP 36 -4.247 43.676 12.615 1.00 1.89 C ATOM 531 CD1 TRP 36 -4.968 43.250 13.677 1.00 1.89 C ATOM 533 NE1 TRP 36 -6.187 43.895 13.719 1.00 1.89 N ATOM 535 CE2 TRP 36 -6.349 44.732 12.636 1.00 1.89 C ATOM 536 CZ2 TRP 36 -7.405 45.562 12.232 1.00 1.89 C ATOM 538 CH2 TRP 36 -7.289 46.272 11.026 1.00 1.89 C ATOM 540 CZ3 TRP 36 -6.116 46.160 10.257 1.00 1.89 C ATOM 542 CE3 TRP 36 -5.055 45.333 10.680 1.00 1.89 C ATOM 544 CD2 TRP 36 -5.136 44.592 11.885 1.00 1.89 C ATOM 545 C TRP 36 -0.874 42.668 10.913 1.00 1.89 C ATOM 546 O TRP 36 0.148 43.371 10.937 1.00 1.89 O ATOM 547 N ILE 37 -0.810 41.326 10.717 1.00 1.61 N ATOM 549 CA ILE 37 0.515 40.654 10.645 1.00 1.61 C ATOM 551 CB ILE 37 0.498 39.185 11.081 1.00 1.61 C ATOM 553 CG2 ILE 37 1.889 38.558 10.872 1.00 1.61 C ATOM 557 CG1 ILE 37 0.115 39.035 12.558 1.00 1.61 C ATOM 560 CD1 ILE 37 1.099 39.662 13.556 1.00 1.61 C ATOM 564 C ILE 37 1.165 40.810 9.254 1.00 1.61 C ATOM 565 O ILE 37 2.384 40.906 9.154 1.00 1.61 O ATOM 566 N SER 38 0.357 40.738 8.189 1.00 1.92 N ATOM 568 CA SER 38 0.785 40.983 6.800 1.00 1.92 C ATOM 570 CB SER 38 -0.421 40.856 5.854 1.00 1.92 C ATOM 573 OG SER 38 -1.081 39.618 6.008 1.00 1.92 O ATOM 575 C SER 38 1.402 42.378 6.558 1.00 1.92 C ATOM 576 O SER 38 1.843 42.708 5.450 1.00 1.92 O ATOM 577 N SER 39 1.411 43.227 7.578 1.00 2.24 N ATOM 579 CA SER 39 2.226 44.440 7.616 1.00 2.24 C ATOM 581 CB SER 39 1.607 45.473 8.564 1.00 2.24 C ATOM 584 OG SER 39 0.276 45.777 8.188 1.00 2.24 O ATOM 586 C SER 39 3.669 44.115 8.040 1.00 2.24 C ATOM 587 O SER 39 4.637 44.536 7.393 1.00 2.24 O ATOM 588 N PHE 40 3.825 43.256 9.104 1.00 1.69 N ATOM 590 CA PHE 40 5.119 43.198 9.797 1.00 1.69 C ATOM 592 CB PHE 40 4.911 43.017 11.313 1.00 1.69 C ATOM 595 CG PHE 40 4.515 44.299 12.053 1.00 1.69 C ATOM 596 CD1 PHE 40 3.350 45.018 11.710 1.00 1.69 C ATOM 598 CE1 PHE 40 2.982 46.175 12.425 1.00 1.69 C ATOM 600 CZ PHE 40 3.764 46.615 13.510 1.00 1.69 C ATOM 602 CE2 PHE 40 4.913 45.893 13.877 1.00 1.69 C ATOM 604 CD2 PHE 40 5.295 44.758 13.136 1.00 1.69 C ATOM 606 C PHE 40 6.067 42.164 9.145 1.00 1.69 C ATOM 607 O PHE 40 7.222 42.468 8.807 1.00 1.69 O ATOM 608 N ILE 41 5.532 41.000 8.719 1.00 1.79 N ATOM 610 CA ILE 41 6.194 40.219 7.680 1.00 1.79 C ATOM 612 CB ILE 41 5.698 38.768 7.575 1.00 1.79 C ATOM 614 CG2 ILE 41 6.569 38.095 6.477 1.00 1.79 C ATOM 618 CG1 ILE 41 5.635 38.002 8.925 1.00 1.79 C ATOM 621 CD1 ILE 41 6.927 37.315 9.365 1.00 1.79 C ATOM 625 C ILE 41 5.968 40.931 6.342 1.00 1.79 C ATOM 626 O ILE 41 5.017 41.687 6.157 1.00 1.79 O ATOM 627 N GLY 42 6.854 40.571 5.381 1.00 4.27 N ATOM 629 CA GLY 42 6.897 41.176 4.070 1.00 4.27 C ATOM 632 C GLY 42 7.605 42.523 4.043 1.00 4.27 C ATOM 633 O GLY 42 8.150 42.823 2.983 1.00 4.27 O ATOM 634 N ARG 43 7.663 43.299 5.127 1.00 5.40 N ATOM 636 CA ARG 43 8.754 44.290 5.276 1.00 5.40 C ATOM 638 CB ARG 43 8.269 45.618 5.916 1.00 5.40 C ATOM 641 CG ARG 43 6.931 46.282 5.487 1.00 5.40 C ATOM 644 CD ARG 43 6.353 46.024 4.079 1.00 5.40 C ATOM 647 NE ARG 43 4.871 46.142 4.034 1.00 5.40 N ATOM 649 CZ ARG 43 3.996 45.158 4.195 1.00 5.40 C ATOM 650 NH1 ARG 43 2.731 45.294 3.924 1.00 5.40 N ATOM 653 NH2 ARG 43 4.323 44.006 4.686 1.00 5.40 N ATOM 656 C ARG 43 9.972 43.704 6.002 1.00 5.40 C ATOM 657 O ARG 43 10.021 43.763 7.220 1.00 5.40 O ATOM 658 N SER 44 10.899 43.065 5.236 1.00 6.87 N ATOM 660 CA SER 44 12.328 42.733 5.485 1.00 6.87 C ATOM 662 CB SER 44 12.948 42.423 4.117 1.00 6.87 C ATOM 665 OG SER 44 12.999 43.573 3.298 1.00 6.87 O ATOM 667 C SER 44 13.153 43.845 6.214 1.00 6.87 C ATOM 668 O SER 44 14.299 44.087 5.843 1.00 6.87 O ATOM 669 N LYS 45 12.543 44.587 7.130 1.00 5.09 N ATOM 671 CA LYS 45 12.806 46.018 7.456 1.00 5.09 C ATOM 673 CB LYS 45 12.103 46.426 8.764 1.00 5.09 C ATOM 676 CG LYS 45 10.627 46.834 8.702 1.00 5.09 C ATOM 679 CD LYS 45 10.189 47.271 10.109 1.00 5.09 C ATOM 682 CE LYS 45 8.671 47.462 10.180 1.00 5.09 C ATOM 685 NZ LYS 45 8.252 47.748 11.574 1.00 5.09 N ATOM 689 C LYS 45 14.266 46.476 7.587 1.00 5.09 C ATOM 690 O LYS 45 14.573 47.649 7.401 1.00 5.09 O TER END