####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name S0953s2TS135_4-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name S0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap S0953s2TS135_4-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 19 22 - 40 4.93 17.26 LCS_AVERAGE: 36.42 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 13 - 20 1.96 27.56 LCS_AVERAGE: 12.96 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 5 2 - 6 0.87 17.32 LONGEST_CONTINUOUS_SEGMENT: 5 10 - 14 0.93 29.38 LONGEST_CONTINUOUS_SEGMENT: 5 13 - 17 0.58 30.47 LONGEST_CONTINUOUS_SEGMENT: 5 14 - 18 0.96 28.45 LCS_AVERAGE: 8.88 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 5 5 8 1 4 6 6 7 8 11 13 14 15 16 18 20 22 22 24 25 27 28 29 LCS_GDT V 3 V 3 5 5 8 3 4 5 6 7 8 11 13 14 15 16 18 20 22 22 24 25 27 28 29 LCS_GDT Q 4 Q 4 5 5 8 4 4 5 6 7 8 11 13 14 15 16 17 18 20 22 24 25 27 28 29 LCS_GDT G 5 G 5 5 5 10 3 4 5 6 7 7 9 10 11 14 15 16 17 19 21 23 25 27 28 29 LCS_GDT P 6 P 6 5 5 15 0 3 5 6 7 7 7 7 9 10 12 14 17 19 21 23 25 27 28 29 LCS_GDT W 7 W 7 3 4 15 0 3 4 4 5 5 6 7 9 10 11 14 17 19 21 23 25 27 28 29 LCS_GDT V 8 V 8 3 4 15 0 3 4 4 5 5 6 8 9 10 12 14 17 19 21 23 25 27 28 29 LCS_GDT G 9 G 9 3 4 15 0 3 4 4 6 7 8 8 11 13 13 14 17 17 21 23 25 27 28 29 LCS_GDT S 10 S 10 5 5 15 0 4 5 5 5 6 9 9 11 13 13 14 14 17 17 19 21 23 27 29 LCS_GDT S 11 S 11 5 5 15 3 4 5 5 6 7 9 10 11 13 13 14 14 15 16 18 18 19 23 24 LCS_GDT Y 12 Y 12 5 6 15 3 4 5 5 5 6 9 10 11 13 13 14 14 15 15 16 16 16 20 22 LCS_GDT V 13 V 13 5 8 15 4 5 5 5 6 8 9 10 11 13 13 14 14 15 16 18 18 19 23 24 LCS_GDT A 14 A 14 5 8 15 4 5 6 6 6 8 9 10 11 13 13 14 14 15 16 18 18 18 20 22 LCS_GDT E 15 E 15 5 8 15 4 5 6 6 6 8 9 10 11 13 13 14 14 15 15 16 16 16 18 21 LCS_GDT T 16 T 16 5 8 15 4 5 6 6 6 8 9 10 11 13 13 14 14 15 16 18 18 18 20 22 LCS_GDT G 17 G 17 5 8 15 4 5 6 6 6 8 9 10 11 13 13 14 14 15 16 18 18 20 23 24 LCS_GDT Q 18 Q 18 5 8 15 3 4 6 6 6 8 8 10 11 13 13 14 14 17 17 19 21 23 26 29 LCS_GDT N 19 N 19 4 8 15 3 4 6 6 6 8 9 10 11 13 13 14 17 18 21 23 25 27 28 29 LCS_GDT W 20 W 20 4 8 16 3 4 5 5 6 8 9 11 12 14 16 17 18 19 22 24 25 27 28 29 LCS_GDT A 21 A 21 4 5 18 3 4 5 6 6 7 11 13 14 15 16 17 18 20 22 24 25 27 28 29 LCS_GDT S 22 S 22 4 5 19 1 4 4 4 7 8 11 13 14 15 16 18 20 22 22 24 25 27 28 29 LCS_GDT L 23 L 23 3 3 19 1 3 4 4 7 8 8 9 14 15 16 18 20 22 22 24 25 27 28 29 LCS_GDT A 24 A 24 3 4 19 1 3 5 5 6 8 11 13 14 15 16 18 20 22 22 24 25 27 28 29 LCS_GDT A 25 A 25 3 5 19 3 3 4 4 4 4 5 8 10 13 15 18 20 22 22 24 25 27 28 29 LCS_GDT N 26 N 26 3 5 19 3 3 4 4 4 4 5 6 9 9 12 14 19 22 22 24 25 26 27 28 LCS_GDT E 27 E 27 3 5 19 3 3 4 4 5 7 8 9 12 14 15 16 20 22 22 24 25 27 28 29 LCS_GDT L 28 L 28 3 6 19 0 3 4 6 7 8 11 13 14 15 16 18 20 22 22 24 25 27 28 29 LCS_GDT R 29 R 29 4 6 19 0 4 5 6 7 8 11 13 14 15 16 18 20 22 22 24 25 27 28 29 LCS_GDT V 30 V 30 4 6 19 4 4 5 6 7 9 10 13 14 15 16 18 20 22 22 24 25 27 28 29 LCS_GDT T 31 T 31 4 7 19 4 4 5 6 7 9 10 13 14 15 15 18 20 22 22 24 25 27 28 29 LCS_GDT E 32 E 32 4 7 19 3 4 5 6 7 9 9 9 12 15 15 16 17 20 21 23 25 27 28 28 LCS_GDT R 33 R 33 3 7 19 4 4 5 6 7 9 11 13 14 15 16 18 20 22 22 24 25 27 28 29 LCS_GDT P 34 P 34 4 7 19 3 4 6 6 7 9 11 13 14 15 16 18 20 22 22 24 25 27 28 29 LCS_GDT F 35 F 35 4 7 19 3 4 6 6 7 9 11 13 14 15 16 18 20 22 22 24 25 27 28 29 LCS_GDT W 36 W 36 4 7 19 3 4 6 6 7 9 9 9 12 13 16 18 20 22 22 24 25 27 28 29 LCS_GDT I 37 I 37 4 7 19 0 4 6 6 7 9 9 9 12 13 16 18 20 22 22 24 25 27 28 29 LCS_GDT S 38 S 38 3 7 19 0 3 6 6 7 9 9 9 12 13 15 18 20 22 22 24 25 26 28 29 LCS_GDT S 39 S 39 3 4 19 1 3 3 3 4 6 8 9 10 11 15 18 20 22 22 24 25 27 28 29 LCS_GDT F 40 F 40 3 4 19 3 3 3 3 4 6 8 9 10 11 12 17 20 22 22 24 25 26 26 28 LCS_GDT I 41 I 41 3 4 14 3 3 3 4 4 5 8 9 10 11 13 18 20 22 22 24 25 26 26 28 LCS_GDT G 42 G 42 3 4 13 3 3 3 4 4 6 8 9 10 11 12 13 19 22 22 24 25 26 26 28 LCS_GDT R 43 R 43 3 4 13 3 3 3 4 4 5 6 7 9 10 10 10 12 13 14 15 16 21 21 22 LCS_GDT S 44 S 44 3 4 13 3 3 3 4 4 6 8 9 10 11 11 11 12 13 14 16 17 21 21 22 LCS_GDT K 45 K 45 3 4 13 3 3 4 5 6 6 8 9 9 11 11 11 12 12 14 16 17 21 22 24 LCS_AVERAGE LCS_A: 19.42 ( 8.88 12.96 36.42 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 5 6 6 7 9 11 13 14 15 16 18 20 22 22 24 25 27 28 29 GDT PERCENT_AT 9.09 11.36 13.64 13.64 15.91 20.45 25.00 29.55 31.82 34.09 36.36 40.91 45.45 50.00 50.00 54.55 56.82 61.36 63.64 65.91 GDT RMS_LOCAL 0.28 0.58 1.00 1.00 1.36 2.18 2.80 3.03 3.16 3.35 4.16 4.46 4.85 5.19 5.19 5.51 5.64 6.35 6.55 7.05 GDT RMS_ALL_AT 31.06 30.47 28.71 28.71 17.48 16.22 13.80 13.84 13.95 14.00 13.46 15.33 15.64 15.81 15.81 14.44 14.53 12.59 12.58 12.01 # Checking swapping # possible swapping detected: E 15 E 15 # possible swapping detected: E 27 E 27 # possible swapping detected: E 32 E 32 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 3.309 0 0.137 0.170 3.633 29.545 27.273 - LGA V 3 V 3 1.802 0 0.065 1.030 5.713 60.455 38.701 5.713 LGA Q 4 Q 4 2.921 0 0.068 1.164 8.510 22.273 11.919 5.186 LGA G 5 G 5 7.103 0 0.058 0.058 9.416 0.000 0.000 - LGA P 6 P 6 9.275 0 0.698 0.572 10.980 0.000 0.000 10.980 LGA W 7 W 7 11.230 0 0.432 1.163 16.625 0.000 0.000 14.991 LGA V 8 V 8 11.333 0 0.617 1.399 12.678 0.000 0.000 9.271 LGA G 9 G 9 13.272 0 0.551 0.551 15.158 0.000 0.000 - LGA S 10 S 10 18.919 0 0.642 0.666 22.296 0.000 0.000 20.172 LGA S 11 S 11 22.935 0 0.063 0.643 25.624 0.000 0.000 24.286 LGA Y 12 Y 12 24.585 0 0.390 1.216 26.428 0.000 0.000 19.328 LGA V 13 V 13 24.593 0 0.353 1.229 26.901 0.000 0.000 22.827 LGA A 14 A 14 30.097 0 0.121 0.142 31.882 0.000 0.000 - LGA E 15 E 15 32.341 0 0.090 0.967 37.227 0.000 0.000 37.227 LGA T 16 T 16 26.827 0 0.239 1.162 28.481 0.000 0.000 23.428 LGA G 17 G 17 24.682 0 0.475 0.475 25.282 0.000 0.000 - LGA Q 18 Q 18 17.812 0 0.049 0.527 20.417 0.000 0.000 15.398 LGA N 19 N 19 13.556 0 0.487 1.192 16.758 0.000 0.000 14.788 LGA W 20 W 20 7.143 0 0.104 1.090 11.913 0.000 0.000 11.245 LGA A 21 A 21 3.314 0 0.663 0.623 3.773 26.818 23.636 - LGA S 22 S 22 2.490 0 0.610 0.686 4.537 27.273 25.758 2.650 LGA L 23 L 23 4.873 0 0.658 1.402 11.523 7.273 3.636 8.649 LGA A 24 A 24 3.171 0 0.621 0.602 4.795 10.000 8.364 - LGA A 25 A 25 7.656 0 0.574 0.578 8.878 0.000 0.000 - LGA N 26 N 26 10.624 0 0.535 1.534 17.455 0.000 0.000 14.963 LGA E 27 E 27 6.894 0 0.414 1.085 12.553 0.000 0.000 12.553 LGA L 28 L 28 2.291 0 0.719 0.652 4.485 41.364 33.409 2.607 LGA R 29 R 29 2.760 0 0.597 1.160 4.423 19.545 22.149 2.936 LGA V 30 V 30 3.420 0 0.214 1.169 6.375 27.727 18.182 3.557 LGA T 31 T 31 3.599 0 0.670 1.336 5.428 8.182 7.532 4.675 LGA E 32 E 32 5.697 0 0.544 1.348 12.015 1.818 0.808 11.054 LGA R 33 R 33 2.172 0 0.647 0.839 13.363 37.273 14.050 13.363 LGA P 34 P 34 3.817 0 0.081 0.288 7.041 23.182 14.026 7.041 LGA F 35 F 35 3.526 0 0.079 1.156 7.058 4.091 11.901 5.048 LGA W 36 W 36 8.284 0 0.115 0.899 17.609 0.000 0.000 17.606 LGA I 37 I 37 9.668 0 0.642 1.479 11.029 0.000 0.000 9.943 LGA S 38 S 38 12.148 0 0.145 0.683 14.481 0.000 0.000 14.481 LGA S 39 S 39 10.661 0 0.702 0.766 12.866 0.000 0.000 12.866 LGA F 40 F 40 11.980 0 0.662 0.758 17.325 0.000 0.000 17.215 LGA I 41 I 41 11.001 0 0.049 0.540 11.760 0.000 0.000 10.780 LGA G 42 G 42 11.005 0 0.657 0.657 11.701 0.000 0.000 - LGA R 43 R 43 15.136 0 0.187 1.029 21.175 0.000 0.000 20.551 LGA S 44 S 44 15.454 0 0.077 0.103 16.744 0.000 0.000 15.639 LGA K 45 K 45 16.203 0 0.049 0.795 19.189 0.000 0.000 19.189 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 11.487 11.391 12.319 7.882 5.940 2.701 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 13 3.03 27.273 23.626 0.416 LGA_LOCAL RMSD: 3.028 Number of atoms: 13 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 13.839 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 11.487 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.685047 * X + -0.723010 * Y + -0.089265 * Z + 21.615028 Y_new = 0.042682 * X + -0.162155 * Y + 0.985842 * Z + 29.082987 Z_new = -0.727248 * X + 0.671538 * Y + 0.141943 * Z + 41.803833 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 3.079368 0.814304 1.362492 [DEG: 176.4348 46.6562 78.0650 ] ZXZ: -3.051292 1.428372 -0.825205 [DEG: -174.8262 81.8397 -47.2807 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: S0953s2TS135_4-D1 REMARK 2: S0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap S0953s2TS135_4-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 13 3.03 23.626 11.49 REMARK ---------------------------------------------------------- MOLECULE S0953s2TS135_4-D1 PFRMAT TS TARGET S0953s2 MODEL 4 PARENT N/A ATOM 9 N ALA 2 14.512 35.386 11.672 1.00 13.50 N ATOM 10 CA ALA 2 13.505 36.372 11.949 1.00 13.50 C ATOM 11 CB ALA 2 13.826 37.761 11.367 1.00 13.50 C ATOM 12 C ALA 2 12.229 35.906 11.304 1.00 13.50 C ATOM 13 O ALA 2 12.146 34.767 10.846 1.00 13.50 O ATOM 14 N VAL 3 11.208 36.778 11.215 1.00 14.40 N ATOM 15 CA VAL 3 9.881 36.257 11.052 1.00 14.40 C ATOM 16 CB VAL 3 9.018 36.264 12.272 1.00 14.40 C ATOM 17 CG1 VAL 3 9.629 35.253 13.246 1.00 14.40 C ATOM 18 CG2 VAL 3 8.879 37.704 12.805 1.00 14.40 C ATOM 19 C VAL 3 9.119 36.906 9.957 1.00 14.40 C ATOM 20 O VAL 3 9.318 38.070 9.613 1.00 14.40 O ATOM 21 N GLN 4 8.138 36.133 9.468 1.00 15.16 N ATOM 22 CA GLN 4 7.616 36.234 8.143 1.00 15.16 C ATOM 23 CB GLN 4 8.501 35.519 7.111 1.00 15.16 C ATOM 24 CG GLN 4 8.037 35.665 5.664 1.00 15.16 C ATOM 25 CD GLN 4 8.893 34.717 4.836 1.00 15.16 C ATOM 26 OE1 GLN 4 9.959 35.072 4.329 1.00 15.16 O ATOM 27 NE2 GLN 4 8.371 33.478 4.631 1.00 15.16 N ATOM 28 C GLN 4 6.325 35.469 8.207 1.00 15.16 C ATOM 29 O GLN 4 6.316 34.339 8.691 1.00 15.16 O ATOM 30 N GLY 5 5.221 36.006 7.655 1.00 17.55 N ATOM 31 CA GLY 5 4.083 35.130 7.590 1.00 17.55 C ATOM 32 C GLY 5 2.882 35.813 6.990 1.00 17.55 C ATOM 33 O GLY 5 2.745 37.035 7.010 1.00 17.55 O ATOM 34 N PRO 6 2.079 34.984 6.342 1.00 21.45 N ATOM 35 CA PRO 6 0.928 35.439 5.585 1.00 21.45 C ATOM 36 CD PRO 6 2.629 33.755 5.794 1.00 21.45 C ATOM 37 CB PRO 6 0.852 34.533 4.356 1.00 21.45 C ATOM 38 CG PRO 6 1.581 33.252 4.789 1.00 21.45 C ATOM 39 C PRO 6 -0.338 35.411 6.399 1.00 21.45 C ATOM 40 O PRO 6 -0.306 34.915 7.525 1.00 21.45 O ATOM 41 N TRP 7 -1.488 35.797 5.806 1.00 24.16 N ATOM 42 CA TRP 7 -2.726 35.842 6.541 1.00 24.16 C ATOM 43 CB TRP 7 -2.803 36.998 7.552 1.00 24.16 C ATOM 44 CG TRP 7 -1.810 36.849 8.673 1.00 24.16 C ATOM 45 CD2 TRP 7 -0.558 37.546 8.745 1.00 24.16 C ATOM 46 CD1 TRP 7 -1.921 36.131 9.828 1.00 24.16 C ATOM 47 NE1 TRP 7 -0.809 36.330 10.610 1.00 24.16 N ATOM 48 CE2 TRP 7 0.049 37.176 9.943 1.00 24.16 C ATOM 49 CE3 TRP 7 0.033 38.429 7.886 1.00 24.16 C ATOM 50 CZ2 TRP 7 1.296 37.624 10.269 1.00 24.16 C ATOM 51 CZ3 TRP 7 1.283 38.896 8.230 1.00 24.16 C ATOM 52 CH2 TRP 7 1.913 38.484 9.386 1.00 24.16 C ATOM 53 C TRP 7 -3.843 36.047 5.554 1.00 24.16 C ATOM 54 O TRP 7 -3.629 36.628 4.490 1.00 24.16 O ATOM 55 N VAL 8 -5.091 35.678 5.926 1.00 28.05 N ATOM 56 CA VAL 8 -6.132 35.731 4.930 1.00 28.05 C ATOM 57 CB VAL 8 -6.210 34.541 4.028 1.00 28.05 C ATOM 58 CG1 VAL 8 -4.947 34.529 3.162 1.00 28.05 C ATOM 59 CG2 VAL 8 -6.331 33.286 4.897 1.00 28.05 C ATOM 60 C VAL 8 -7.487 36.027 5.498 1.00 28.05 C ATOM 61 O VAL 8 -7.705 36.018 6.709 1.00 28.05 O ATOM 62 N GLY 9 -8.466 36.192 4.585 1.00 31.77 N ATOM 63 CA GLY 9 -9.797 36.591 4.936 1.00 31.77 C ATOM 64 C GLY 9 -10.702 36.270 3.780 1.00 31.77 C ATOM 65 O GLY 9 -10.329 36.448 2.621 1.00 31.77 O ATOM 66 N SER 10 -11.968 35.906 4.066 1.00 35.55 N ATOM 67 CA SER 10 -12.762 35.194 3.097 1.00 35.55 C ATOM 68 CB SER 10 -13.697 34.149 3.721 1.00 35.55 C ATOM 69 OG SER 10 -12.935 33.257 4.523 1.00 35.55 O ATOM 70 C SER 10 -13.576 36.184 2.306 1.00 35.55 C ATOM 71 O SER 10 -14.262 37.046 2.856 1.00 35.55 O ATOM 72 N SER 11 -13.602 35.973 0.975 1.00 39.51 N ATOM 73 CA SER 11 -13.933 36.958 -0.022 1.00 39.51 C ATOM 74 CB SER 11 -13.110 36.765 -1.311 1.00 39.51 C ATOM 75 OG SER 11 -13.443 35.534 -1.937 1.00 39.51 O ATOM 76 C SER 11 -15.381 37.105 -0.423 1.00 39.51 C ATOM 77 O SER 11 -15.924 38.203 -0.341 1.00 39.51 O ATOM 78 N TYR 12 -16.062 36.060 -0.931 1.00 43.80 N ATOM 79 CA TYR 12 -17.365 36.371 -1.475 1.00 43.80 C ATOM 80 CB TYR 12 -17.683 35.584 -2.756 1.00 43.80 C ATOM 81 CG TYR 12 -16.730 36.078 -3.783 1.00 43.80 C ATOM 82 CD1 TYR 12 -15.502 35.469 -3.922 1.00 43.80 C ATOM 83 CD2 TYR 12 -17.101 37.049 -4.684 1.00 43.80 C ATOM 84 CE1 TYR 12 -14.700 35.745 -5.004 1.00 43.80 C ATOM 85 CE2 TYR 12 -16.300 37.333 -5.765 1.00 43.80 C ATOM 86 CZ TYR 12 -15.082 36.710 -5.904 1.00 43.80 C ATOM 87 OH TYR 12 -14.191 37.122 -6.917 1.00 43.80 O ATOM 88 C TYR 12 -18.419 35.996 -0.473 1.00 43.80 C ATOM 89 O TYR 12 -19.414 35.356 -0.812 1.00 43.80 O ATOM 90 N VAL 13 -18.225 36.442 0.776 1.00 42.58 N ATOM 91 CA VAL 13 -18.943 36.125 1.986 1.00 42.58 C ATOM 92 CB VAL 13 -18.159 35.411 3.038 1.00 42.58 C ATOM 93 CG1 VAL 13 -17.832 33.994 2.552 1.00 42.58 C ATOM 94 CG2 VAL 13 -16.963 36.291 3.415 1.00 42.58 C ATOM 95 C VAL 13 -19.528 37.310 2.693 1.00 42.58 C ATOM 96 O VAL 13 -19.769 37.195 3.893 1.00 42.58 O ATOM 97 N ALA 14 -19.874 38.413 2.004 1.00 44.23 N ATOM 98 CA ALA 14 -19.696 39.750 2.513 1.00 44.23 C ATOM 99 CB ALA 14 -19.819 40.818 1.412 1.00 44.23 C ATOM 100 C ALA 14 -20.722 40.073 3.558 1.00 44.23 C ATOM 101 O ALA 14 -20.534 41.017 4.324 1.00 44.23 O ATOM 102 N GLU 15 -21.840 39.329 3.616 1.00 45.77 N ATOM 103 CA GLU 15 -22.866 39.656 4.561 1.00 45.77 C ATOM 104 CB GLU 15 -24.219 39.047 4.140 1.00 45.77 C ATOM 105 CG GLU 15 -24.222 37.516 4.201 1.00 45.77 C ATOM 106 CD GLU 15 -25.521 37.006 3.593 1.00 45.77 C ATOM 107 OE1 GLU 15 -26.592 37.190 4.238 1.00 45.77 O ATOM 108 OE2 GLU 15 -25.460 36.397 2.494 1.00 45.77 O ATOM 109 C GLU 15 -22.486 39.103 5.912 1.00 45.77 C ATOM 110 O GLU 15 -22.994 39.574 6.930 1.00 45.77 O ATOM 111 N THR 16 -21.521 38.161 5.975 1.00 42.25 N ATOM 112 CA THR 16 -21.101 37.593 7.234 1.00 42.25 C ATOM 113 CB THR 16 -20.679 36.157 7.127 1.00 42.25 C ATOM 114 OG1 THR 16 -20.628 35.577 8.422 1.00 42.25 O ATOM 115 CG2 THR 16 -19.300 36.071 6.457 1.00 42.25 C ATOM 116 C THR 16 -19.986 38.378 7.871 1.00 42.25 C ATOM 117 O THR 16 -20.150 38.911 8.967 1.00 42.25 O ATOM 118 N GLY 17 -18.790 38.405 7.241 1.00 41.00 N ATOM 119 CA GLY 17 -17.728 39.249 7.719 1.00 41.00 C ATOM 120 C GLY 17 -16.641 38.395 8.303 1.00 41.00 C ATOM 121 O GLY 17 -15.723 37.982 7.594 1.00 41.00 O ATOM 122 N GLN 18 -16.675 38.166 9.634 1.00 37.12 N ATOM 123 CA GLN 18 -15.518 37.682 10.332 1.00 37.12 C ATOM 124 CB GLN 18 -15.649 37.773 11.864 1.00 37.12 C ATOM 125 CG GLN 18 -15.579 39.202 12.407 1.00 37.12 C ATOM 126 CD GLN 18 -14.180 39.417 12.964 1.00 37.12 C ATOM 127 OE1 GLN 18 -13.706 38.634 13.787 1.00 37.12 O ATOM 128 NE2 GLN 18 -13.505 40.513 12.523 1.00 37.12 N ATOM 129 C GLN 18 -15.292 36.238 10.011 1.00 37.12 C ATOM 130 O GLN 18 -16.192 35.412 10.157 1.00 37.12 O ATOM 131 N ASN 19 -14.046 35.897 9.624 1.00 34.63 N ATOM 132 CA ASN 19 -13.752 34.571 9.161 1.00 34.63 C ATOM 133 CB ASN 19 -14.598 34.177 7.938 1.00 34.63 C ATOM 134 CG ASN 19 -14.979 32.705 8.029 1.00 34.63 C ATOM 135 OD1 ASN 19 -14.586 31.986 8.949 1.00 34.63 O ATOM 136 ND2 ASN 19 -15.745 32.229 7.013 1.00 34.63 N ATOM 137 C ASN 19 -12.327 34.622 8.709 1.00 34.63 C ATOM 138 O ASN 19 -12.038 34.465 7.526 1.00 34.63 O ATOM 139 N TRP 20 -11.381 34.748 9.664 1.00 30.69 N ATOM 140 CA TRP 20 -10.045 35.153 9.327 1.00 30.69 C ATOM 141 CB TRP 20 -9.654 36.461 10.045 1.00 30.69 C ATOM 142 CG TRP 20 -8.232 36.949 9.869 1.00 30.69 C ATOM 143 CD2 TRP 20 -7.778 37.767 8.778 1.00 30.69 C ATOM 144 CD1 TRP 20 -7.159 36.776 10.696 1.00 30.69 C ATOM 145 NE1 TRP 20 -6.057 37.408 10.173 1.00 30.69 N ATOM 146 CE2 TRP 20 -6.421 38.019 8.993 1.00 30.69 C ATOM 147 CE3 TRP 20 -8.431 38.264 7.690 1.00 30.69 C ATOM 148 CZ2 TRP 20 -5.690 38.749 8.098 1.00 30.69 C ATOM 149 CZ3 TRP 20 -7.690 38.998 6.788 1.00 30.69 C ATOM 150 CH2 TRP 20 -6.346 39.233 6.988 1.00 30.69 C ATOM 151 C TRP 20 -9.098 34.083 9.760 1.00 30.69 C ATOM 152 O TRP 20 -9.364 33.361 10.721 1.00 30.69 O ATOM 153 N ALA 21 -7.919 34.009 9.110 1.00 27.68 N ATOM 154 CA ALA 21 -7.019 32.949 9.457 1.00 27.68 C ATOM 155 CB ALA 21 -6.616 32.058 8.268 1.00 27.68 C ATOM 156 C ALA 21 -5.787 33.608 9.984 1.00 27.68 C ATOM 157 O ALA 21 -5.463 34.722 9.577 1.00 27.68 O ATOM 158 N SER 22 -5.016 32.905 10.837 1.00 23.84 N ATOM 159 CA SER 22 -4.180 33.633 11.751 1.00 23.84 C ATOM 160 CB SER 22 -4.845 33.939 13.103 1.00 23.84 C ATOM 161 OG SER 22 -5.962 34.792 12.933 1.00 23.84 O ATOM 162 C SER 22 -2.974 32.834 12.115 1.00 23.84 C ATOM 163 O SER 22 -3.071 31.655 12.453 1.00 23.84 O ATOM 164 N LEU 23 -1.784 33.450 12.043 1.00 18.44 N ATOM 165 CA LEU 23 -0.608 32.658 12.232 1.00 18.44 C ATOM 166 CB LEU 23 0.290 32.578 10.987 1.00 18.44 C ATOM 167 CG LEU 23 1.572 31.767 11.234 1.00 18.44 C ATOM 168 CD1 LEU 23 1.249 30.275 11.409 1.00 18.44 C ATOM 169 CD2 LEU 23 2.608 32.021 10.128 1.00 18.44 C ATOM 170 C LEU 23 0.170 33.310 13.334 1.00 18.44 C ATOM 171 O LEU 23 0.099 34.526 13.507 1.00 18.44 O ATOM 172 N ALA 24 0.968 32.519 14.078 1.00 15.79 N ATOM 173 CA ALA 24 1.524 33.029 15.302 1.00 15.79 C ATOM 174 CB ALA 24 1.221 32.163 16.540 1.00 15.79 C ATOM 175 C ALA 24 3.009 33.093 15.117 1.00 15.79 C ATOM 176 O ALA 24 3.542 32.533 14.161 1.00 15.79 O ATOM 177 N ALA 25 3.711 33.855 15.981 1.00 15.63 N ATOM 178 CA ALA 25 5.098 34.100 15.707 1.00 15.63 C ATOM 179 CB ALA 25 5.322 35.138 14.594 1.00 15.63 C ATOM 180 C ALA 25 5.739 34.650 16.942 1.00 15.63 C ATOM 181 O ALA 25 5.070 34.910 17.941 1.00 15.63 O ATOM 182 N ASN 26 7.075 34.854 16.884 1.00 16.21 N ATOM 183 CA ASN 26 7.769 35.458 17.984 1.00 16.21 C ATOM 184 CB ASN 26 9.309 35.383 17.889 1.00 16.21 C ATOM 185 CG ASN 26 9.832 36.563 17.082 1.00 16.21 C ATOM 186 OD1 ASN 26 9.397 36.840 15.965 1.00 16.21 O ATOM 187 ND2 ASN 26 10.873 37.240 17.637 1.00 16.21 N ATOM 188 C ASN 26 7.364 36.898 18.138 1.00 16.21 C ATOM 189 O ASN 26 8.043 37.828 17.702 1.00 16.21 O ATOM 190 N GLU 27 6.129 37.092 18.674 1.00 17.02 N ATOM 191 CA GLU 27 5.660 38.315 19.258 1.00 17.02 C ATOM 192 CB GLU 27 6.793 39.254 19.699 1.00 17.02 C ATOM 193 CG GLU 27 7.820 38.554 20.589 1.00 17.02 C ATOM 194 CD GLU 27 7.372 38.729 22.035 1.00 17.02 C ATOM 195 OE1 GLU 27 6.812 39.812 22.357 1.00 17.02 O ATOM 196 OE2 GLU 27 7.639 37.807 22.851 1.00 17.02 O ATOM 197 C GLU 27 4.734 39.085 18.357 1.00 17.02 C ATOM 198 O GLU 27 5.012 40.241 18.036 1.00 17.02 O ATOM 199 N LEU 28 3.587 38.522 17.892 1.00 16.75 N ATOM 200 CA LEU 28 2.757 39.242 16.962 1.00 16.75 C ATOM 201 CB LEU 28 3.014 38.856 15.496 1.00 16.75 C ATOM 202 CG LEU 28 4.496 39.016 15.097 1.00 16.75 C ATOM 203 CD1 LEU 28 4.766 38.458 13.693 1.00 16.75 C ATOM 204 CD2 LEU 28 4.962 40.473 15.249 1.00 16.75 C ATOM 205 C LEU 28 1.347 38.882 17.327 1.00 16.75 C ATOM 206 O LEU 28 1.141 38.058 18.216 1.00 16.75 O ATOM 207 N ARG 29 0.311 39.484 16.664 1.00 18.18 N ATOM 208 CA ARG 29 -1.008 39.299 17.210 1.00 18.18 C ATOM 209 CB ARG 29 -1.176 40.026 18.556 1.00 18.18 C ATOM 210 CG ARG 29 0.121 40.052 19.367 1.00 18.18 C ATOM 211 CD ARG 29 0.049 39.388 20.742 1.00 18.18 C ATOM 212 NE ARG 29 1.456 39.234 21.202 1.00 18.18 N ATOM 213 CZ ARG 29 2.026 37.994 21.159 1.00 18.18 C ATOM 214 NH1 ARG 29 1.276 36.921 20.771 1.00 18.18 N ATOM 215 NH2 ARG 29 3.346 37.827 21.459 1.00 18.18 N ATOM 216 C ARG 29 -2.066 39.851 16.302 1.00 18.18 C ATOM 217 O ARG 29 -1.780 40.536 15.321 1.00 18.18 O ATOM 218 N VAL 30 -3.353 39.614 16.662 1.00 20.41 N ATOM 219 CA VAL 30 -4.460 39.935 15.803 1.00 20.41 C ATOM 220 CB VAL 30 -4.768 38.882 14.777 1.00 20.41 C ATOM 221 CG1 VAL 30 -3.539 38.709 13.875 1.00 20.41 C ATOM 222 CG2 VAL 30 -5.138 37.587 15.506 1.00 20.41 C ATOM 223 C VAL 30 -5.677 40.179 16.645 1.00 20.41 C ATOM 224 O VAL 30 -5.702 39.879 17.838 1.00 20.41 O ATOM 225 N THR 31 -6.729 40.768 16.013 1.00 22.45 N ATOM 226 CA THR 31 -7.851 41.301 16.731 1.00 22.45 C ATOM 227 CB THR 31 -7.466 42.552 17.486 1.00 22.45 C ATOM 228 OG1 THR 31 -8.497 42.976 18.360 1.00 22.45 O ATOM 229 CG2 THR 31 -7.104 43.662 16.493 1.00 22.45 C ATOM 230 C THR 31 -8.937 41.575 15.735 1.00 22.45 C ATOM 231 O THR 31 -8.942 40.980 14.659 1.00 22.45 O ATOM 232 N GLU 32 -9.893 42.468 16.087 1.00 25.26 N ATOM 233 CA GLU 32 -11.201 42.475 15.495 1.00 25.26 C ATOM 234 CB GLU 32 -12.166 43.365 16.291 1.00 25.26 C ATOM 235 CG GLU 32 -12.570 42.769 17.637 1.00 25.26 C ATOM 236 CD GLU 32 -13.327 43.839 18.410 1.00 25.26 C ATOM 237 OE1 GLU 32 -13.460 44.972 17.873 1.00 25.26 O ATOM 238 OE2 GLU 32 -13.757 43.552 19.559 1.00 25.26 O ATOM 239 C GLU 32 -11.109 43.092 14.129 1.00 25.26 C ATOM 240 O GLU 32 -11.400 42.419 13.140 1.00 25.26 O ATOM 241 N ARG 33 -10.760 44.395 14.033 1.00 26.35 N ATOM 242 CA ARG 33 -10.380 44.946 12.756 1.00 26.35 C ATOM 243 CB ARG 33 -10.891 46.383 12.570 1.00 26.35 C ATOM 244 CG ARG 33 -12.312 46.506 13.106 1.00 26.35 C ATOM 245 CD ARG 33 -13.235 45.486 12.437 1.00 26.35 C ATOM 246 NE ARG 33 -14.637 45.959 12.564 1.00 26.35 N ATOM 247 CZ ARG 33 -15.653 45.115 12.226 1.00 26.35 C ATOM 248 NH1 ARG 33 -15.423 43.772 12.120 1.00 26.35 N ATOM 249 NH2 ARG 33 -16.906 45.611 12.015 1.00 26.35 N ATOM 250 C ARG 33 -8.911 44.908 12.371 1.00 26.35 C ATOM 251 O ARG 33 -8.580 44.613 11.222 1.00 26.35 O ATOM 252 N PRO 34 -8.018 45.263 13.289 1.00 23.30 N ATOM 253 CA PRO 34 -6.617 45.483 12.948 1.00 23.30 C ATOM 254 CD PRO 34 -8.426 46.078 14.421 1.00 23.30 C ATOM 255 CB PRO 34 -6.160 46.650 13.823 1.00 23.30 C ATOM 256 CG PRO 34 -7.122 46.627 15.020 1.00 23.30 C ATOM 257 C PRO 34 -5.716 44.292 13.120 1.00 23.30 C ATOM 258 O PRO 34 -6.204 43.186 13.339 1.00 23.30 O ATOM 259 N PHE 35 -4.380 44.517 13.131 1.00 19.81 N ATOM 260 CA PHE 35 -3.419 43.449 13.201 1.00 19.81 C ATOM 261 CB PHE 35 -3.016 42.878 11.830 1.00 19.81 C ATOM 262 CG PHE 35 -2.073 41.744 12.065 1.00 19.81 C ATOM 263 CD1 PHE 35 -2.549 40.464 12.224 1.00 19.81 C ATOM 264 CD2 PHE 35 -0.713 41.959 12.099 1.00 19.81 C ATOM 265 CE1 PHE 35 -1.691 39.420 12.486 1.00 19.81 C ATOM 266 CE2 PHE 35 0.151 40.920 12.361 1.00 19.81 C ATOM 267 CZ PHE 35 -0.340 39.655 12.581 1.00 19.81 C ATOM 268 C PHE 35 -2.207 44.114 13.789 1.00 19.81 C ATOM 269 O PHE 35 -2.009 45.311 13.591 1.00 19.81 O ATOM 270 N TRP 36 -1.299 43.343 14.454 1.00 17.18 N ATOM 271 CA TRP 36 -0.331 44.008 15.285 1.00 17.18 C ATOM 272 CB TRP 36 -0.757 44.039 16.769 1.00 17.18 C ATOM 273 CG TRP 36 -2.161 44.571 16.983 1.00 17.18 C ATOM 274 CD2 TRP 36 -2.929 44.405 18.189 1.00 17.18 C ATOM 275 CD1 TRP 36 -2.915 45.360 16.161 1.00 17.18 C ATOM 276 NE1 TRP 36 -4.053 45.770 16.813 1.00 17.18 N ATOM 277 CE2 TRP 36 -4.078 45.189 18.062 1.00 17.18 C ATOM 278 CE3 TRP 36 -2.682 43.691 19.324 1.00 17.18 C ATOM 279 CZ2 TRP 36 -5.000 45.267 19.067 1.00 17.18 C ATOM 280 CZ3 TRP 36 -3.606 43.784 20.342 1.00 17.18 C ATOM 281 CH2 TRP 36 -4.746 44.551 20.216 1.00 17.18 C ATOM 282 C TRP 36 1.022 43.363 15.197 1.00 17.18 C ATOM 283 O TRP 36 1.147 42.216 14.768 1.00 17.18 O ATOM 284 N ILE 37 2.085 44.042 15.706 1.00 14.78 N ATOM 285 CA ILE 37 3.420 43.644 15.354 1.00 14.78 C ATOM 286 CB ILE 37 3.844 44.229 14.038 1.00 14.78 C ATOM 287 CG2 ILE 37 5.231 43.669 13.686 1.00 14.78 C ATOM 288 CG1 ILE 37 2.772 43.940 12.971 1.00 14.78 C ATOM 289 CD1 ILE 37 2.900 44.805 11.719 1.00 14.78 C ATOM 290 C ILE 37 4.387 44.141 16.396 1.00 14.78 C ATOM 291 O ILE 37 4.369 45.314 16.760 1.00 14.78 O ATOM 292 N SER 38 5.369 43.305 16.831 1.00 12.38 N ATOM 293 CA SER 38 6.076 43.422 18.079 1.00 12.38 C ATOM 294 CB SER 38 5.595 42.402 19.122 1.00 12.38 C ATOM 295 OG SER 38 4.685 43.017 20.021 1.00 12.38 O ATOM 296 C SER 38 7.563 43.236 17.939 1.00 12.38 C ATOM 297 O SER 38 8.337 44.045 18.441 1.00 12.38 O ATOM 298 N SER 39 8.044 42.098 17.366 1.00 10.64 N ATOM 299 CA SER 39 9.319 41.536 17.749 1.00 10.64 C ATOM 300 CB SER 39 9.563 40.140 17.156 1.00 10.64 C ATOM 301 OG SER 39 10.957 39.882 17.082 1.00 10.64 O ATOM 302 C SER 39 10.435 42.426 17.291 1.00 10.64 C ATOM 303 O SER 39 10.257 43.265 16.407 1.00 10.64 O ATOM 304 N PHE 40 11.678 42.100 17.835 1.00 10.91 N ATOM 305 CA PHE 40 12.694 43.120 17.893 1.00 10.91 C ATOM 306 CB PHE 40 13.188 43.442 19.316 1.00 10.91 C ATOM 307 CG PHE 40 12.137 44.190 20.055 1.00 10.91 C ATOM 308 CD1 PHE 40 11.740 45.443 19.643 1.00 10.91 C ATOM 309 CD2 PHE 40 11.544 43.624 21.162 1.00 10.91 C ATOM 310 CE1 PHE 40 10.720 46.097 20.293 1.00 10.91 C ATOM 311 CE2 PHE 40 10.519 44.270 21.811 1.00 10.91 C ATOM 312 CZ PHE 40 10.094 45.499 21.363 1.00 10.91 C ATOM 313 C PHE 40 13.903 42.604 17.182 1.00 10.91 C ATOM 314 O PHE 40 14.228 41.420 17.265 1.00 10.91 O ATOM 315 N ILE 41 14.666 43.532 16.546 1.00 10.04 N ATOM 316 CA ILE 41 15.714 43.081 15.667 1.00 10.04 C ATOM 317 CB ILE 41 15.590 43.601 14.259 1.00 10.04 C ATOM 318 CG2 ILE 41 16.888 43.246 13.516 1.00 10.04 C ATOM 319 CG1 ILE 41 14.319 43.066 13.572 1.00 10.04 C ATOM 320 CD1 ILE 41 13.037 43.784 13.993 1.00 10.04 C ATOM 321 C ILE 41 17.031 43.563 16.194 1.00 10.04 C ATOM 322 O ILE 41 17.279 44.766 16.274 1.00 10.04 O ATOM 323 N GLY 42 17.892 42.573 16.585 1.00 7.13 N ATOM 324 CA GLY 42 19.134 42.892 17.233 1.00 7.13 C ATOM 325 C GLY 42 20.225 42.370 16.359 1.00 7.13 C ATOM 326 O GLY 42 20.167 41.222 15.923 1.00 7.13 O ATOM 327 N ARG 43 21.230 43.232 16.081 1.00 5.29 N ATOM 328 CA ARG 43 21.956 43.312 14.837 1.00 5.29 C ATOM 329 CB ARG 43 23.002 42.201 14.564 1.00 5.29 C ATOM 330 CG ARG 43 22.538 40.769 14.840 1.00 5.29 C ATOM 331 CD ARG 43 23.540 39.677 14.459 1.00 5.29 C ATOM 332 NE ARG 43 22.763 38.413 14.320 1.00 5.29 N ATOM 333 CZ ARG 43 23.045 37.525 13.320 1.00 5.29 C ATOM 334 NH1 ARG 43 24.025 37.808 12.413 1.00 5.29 N ATOM 335 NH2 ARG 43 22.323 36.370 13.209 1.00 5.29 N ATOM 336 C ARG 43 21.002 43.360 13.690 1.00 5.29 C ATOM 337 O ARG 43 19.863 43.809 13.823 1.00 5.29 O ATOM 338 N SER 44 21.451 42.898 12.505 1.00 3.53 N ATOM 339 CA SER 44 20.748 43.170 11.284 1.00 3.53 C ATOM 340 CB SER 44 21.664 43.561 10.112 1.00 3.53 C ATOM 341 OG SER 44 22.369 44.757 10.412 1.00 3.53 O ATOM 342 C SER 44 20.037 41.921 10.868 1.00 3.53 C ATOM 343 O SER 44 20.639 40.850 10.769 1.00 3.53 O ATOM 344 N LYS 45 18.730 42.060 10.511 1.00 2.31 N ATOM 345 CA LYS 45 17.887 40.911 10.332 1.00 2.31 C ATOM 346 CB LYS 45 17.653 40.086 11.613 1.00 2.31 C ATOM 347 CG LYS 45 18.920 39.751 12.400 1.00 2.31 C ATOM 348 CD LYS 45 18.619 39.156 13.779 1.00 2.31 C ATOM 349 CE LYS 45 19.847 38.573 14.479 1.00 2.31 C ATOM 350 NZ LYS 45 19.462 38.044 15.809 1.00 2.31 N ATOM 351 C LYS 45 16.542 41.453 9.956 1.00 2.31 C ATOM 352 O LYS 45 16.187 42.559 10.363 1.00 2.31 O TER END