####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name S0953s2TS122_3-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name S0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap S0953s2TS122_3-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 23 4 - 26 4.87 16.58 LONGEST_CONTINUOUS_SEGMENT: 23 5 - 27 4.91 16.22 LCS_AVERAGE: 45.45 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 19 - 30 2.00 17.15 LCS_AVERAGE: 20.97 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 20 - 29 0.68 17.72 LCS_AVERAGE: 15.03 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 3 21 3 3 3 3 3 3 4 6 7 8 13 18 19 22 23 24 25 26 28 29 LCS_GDT V 3 V 3 3 5 21 3 3 3 4 5 5 5 6 7 8 8 9 10 16 17 20 20 20 25 25 LCS_GDT Q 4 Q 4 3 5 23 3 3 4 4 5 5 5 6 7 8 13 18 19 22 23 24 25 27 28 29 LCS_GDT G 5 G 5 3 5 23 3 3 4 4 7 11 11 13 15 18 18 20 22 24 26 27 27 28 29 29 LCS_GDT P 6 P 6 3 5 23 3 4 5 9 10 11 11 13 15 18 18 20 22 24 26 27 27 28 29 29 LCS_GDT W 7 W 7 6 7 23 4 6 6 9 10 11 11 13 15 18 18 20 22 24 26 27 27 28 29 29 LCS_GDT V 8 V 8 6 7 23 4 6 6 6 6 7 11 13 15 18 18 20 22 24 26 27 27 28 29 29 LCS_GDT G 9 G 9 6 7 23 4 6 6 6 6 8 11 12 15 15 17 20 22 24 26 27 27 28 29 29 LCS_GDT S 10 S 10 6 7 23 4 6 6 6 6 7 11 12 15 15 17 20 22 24 26 27 27 28 29 29 LCS_GDT S 11 S 11 8 10 23 4 6 7 9 9 9 11 12 15 18 18 20 22 24 26 27 27 28 29 29 LCS_GDT Y 12 Y 12 8 10 23 4 6 7 9 10 11 11 13 15 18 18 20 22 24 26 27 27 28 29 29 LCS_GDT V 13 V 13 8 10 23 5 6 7 9 10 11 11 13 15 18 18 20 22 24 26 27 27 28 29 29 LCS_GDT A 14 A 14 8 10 23 5 6 7 9 10 11 11 13 15 18 18 20 22 24 26 27 27 28 29 29 LCS_GDT E 15 E 15 8 10 23 5 6 7 9 10 11 11 13 15 18 18 20 22 24 26 27 27 28 29 29 LCS_GDT T 16 T 16 8 10 23 5 6 7 9 10 11 11 13 15 18 18 20 22 24 26 27 27 28 29 29 LCS_GDT G 17 G 17 8 10 23 5 6 7 9 10 11 11 13 15 18 18 20 22 24 26 27 27 28 29 29 LCS_GDT Q 18 Q 18 8 10 23 3 5 6 9 9 9 11 13 15 18 18 20 22 24 26 27 27 28 29 29 LCS_GDT N 19 N 19 8 12 23 3 5 8 11 11 11 11 12 15 15 17 19 22 24 26 27 27 28 29 29 LCS_GDT W 20 W 20 10 12 23 5 10 10 11 11 11 11 13 14 18 18 20 22 24 26 27 27 28 29 29 LCS_GDT A 21 A 21 10 12 23 5 10 10 11 11 11 11 13 14 18 18 20 22 24 26 27 27 28 29 29 LCS_GDT S 22 S 22 10 12 23 5 10 10 11 11 11 11 13 14 18 18 20 22 24 26 27 27 28 29 29 LCS_GDT L 23 L 23 10 12 23 5 10 10 11 11 11 11 13 14 18 18 20 22 24 26 27 27 28 29 29 LCS_GDT A 24 A 24 10 12 23 5 10 10 11 11 11 11 11 13 18 18 20 22 24 26 27 27 28 29 29 LCS_GDT A 25 A 25 10 12 23 5 10 10 11 11 11 11 12 14 18 18 20 22 24 26 27 27 28 29 29 LCS_GDT N 26 N 26 10 12 23 5 10 10 11 11 11 11 11 12 15 17 19 22 24 26 27 27 28 29 29 LCS_GDT E 27 E 27 10 12 23 5 10 10 11 11 11 11 11 12 12 13 15 16 22 25 27 27 28 29 29 LCS_GDT L 28 L 28 10 12 15 5 10 10 11 11 11 11 11 12 12 14 16 21 23 26 27 27 28 29 29 LCS_GDT R 29 R 29 10 12 15 4 10 10 11 11 11 11 11 12 15 16 19 21 24 26 27 27 28 29 29 LCS_GDT V 30 V 30 4 12 16 3 4 5 6 6 7 7 11 12 12 14 15 20 23 26 27 27 28 29 29 LCS_GDT T 31 T 31 4 6 16 3 4 5 6 6 6 9 9 12 14 18 20 22 24 26 27 27 28 29 29 LCS_GDT E 32 E 32 4 6 16 4 4 5 6 6 7 11 11 12 13 14 16 20 21 24 25 27 28 29 29 LCS_GDT R 33 R 33 4 6 16 4 4 4 5 6 6 9 10 12 13 14 15 17 21 22 24 26 27 29 29 LCS_GDT P 34 P 34 4 6 16 4 4 4 4 6 6 9 9 12 13 14 15 15 17 20 21 23 26 28 28 LCS_GDT F 35 F 35 4 7 16 4 4 4 6 6 9 11 11 12 13 14 15 15 16 17 18 20 23 26 28 LCS_GDT W 36 W 36 5 10 16 4 4 6 8 10 10 10 11 11 13 14 15 15 16 16 18 19 20 22 24 LCS_GDT I 37 I 37 5 10 16 4 4 6 8 10 10 11 11 12 13 14 15 15 15 15 16 17 19 21 22 LCS_GDT S 38 S 38 5 10 16 4 4 6 8 10 10 11 11 12 13 14 15 15 16 16 18 18 20 22 23 LCS_GDT S 39 S 39 5 10 16 4 4 6 8 10 10 11 11 12 13 14 15 15 16 16 18 18 20 22 23 LCS_GDT F 40 F 40 6 10 16 4 6 6 8 10 10 11 11 12 13 14 15 15 15 15 16 17 19 21 22 LCS_GDT I 41 I 41 6 10 16 4 6 6 8 10 10 11 11 12 13 14 15 15 15 15 18 18 19 21 22 LCS_GDT G 42 G 42 6 10 16 3 6 6 8 10 10 11 11 12 13 14 15 15 15 15 18 18 19 21 22 LCS_GDT R 43 R 43 6 10 16 3 6 6 8 10 10 11 11 12 13 14 15 15 15 15 15 15 15 18 21 LCS_GDT S 44 S 44 6 10 16 3 6 6 8 10 10 11 11 12 13 14 15 15 15 15 15 15 15 16 16 LCS_GDT K 45 K 45 6 10 16 0 6 6 8 10 10 11 11 12 13 14 15 15 15 15 15 15 15 16 16 LCS_AVERAGE LCS_A: 27.15 ( 15.03 20.97 45.45 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 5 10 10 11 11 11 11 13 15 18 18 20 22 24 26 27 27 28 29 29 GDT PERCENT_AT 11.36 22.73 22.73 25.00 25.00 25.00 25.00 29.55 34.09 40.91 40.91 45.45 50.00 54.55 59.09 61.36 61.36 63.64 65.91 65.91 GDT RMS_LOCAL 0.12 0.68 0.68 1.09 1.09 1.09 1.09 2.34 3.14 3.58 3.58 4.06 4.37 4.88 5.22 5.37 5.37 5.67 6.00 5.94 GDT RMS_ALL_AT 18.11 17.72 17.72 17.36 17.36 17.36 17.36 18.89 24.48 16.60 16.60 16.18 16.15 16.10 15.83 15.83 15.83 15.46 15.20 16.37 # Checking swapping # possible swapping detected: E 27 E 27 # possible swapping detected: E 32 E 32 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 10.399 0 0.023 0.023 11.250 0.000 0.000 - LGA V 3 V 3 12.602 0 0.646 1.354 16.953 0.000 0.000 14.210 LGA Q 4 Q 4 9.686 0 0.682 1.179 10.485 0.000 0.000 9.435 LGA G 5 G 5 3.875 0 0.295 0.295 5.657 7.273 7.273 - LGA P 6 P 6 2.047 0 0.669 0.527 6.197 49.091 28.312 6.197 LGA W 7 W 7 1.609 0 0.449 0.370 4.538 54.545 24.545 4.508 LGA V 8 V 8 3.810 0 0.034 0.327 7.679 21.364 12.208 7.679 LGA G 9 G 9 6.161 0 0.149 0.149 6.161 0.455 0.455 - LGA S 10 S 10 7.305 0 0.062 0.066 8.352 0.000 0.000 6.400 LGA S 11 S 11 5.293 0 0.056 0.663 6.785 0.909 0.909 6.701 LGA Y 12 Y 12 2.427 0 0.061 1.155 8.841 38.636 20.909 8.841 LGA V 13 V 13 2.215 0 0.081 1.021 4.826 41.364 37.143 4.826 LGA A 14 A 14 2.382 0 0.049 0.050 2.950 41.364 38.545 - LGA E 15 E 15 1.501 0 0.028 1.171 5.928 62.273 37.172 5.311 LGA T 16 T 16 0.428 0 0.175 0.277 1.899 83.182 80.260 0.740 LGA G 17 G 17 0.537 0 0.126 0.126 0.885 86.364 86.364 - LGA Q 18 Q 18 3.426 0 0.664 1.331 7.225 15.455 7.475 7.225 LGA N 19 N 19 5.500 0 0.640 0.524 11.195 5.455 2.727 9.893 LGA W 20 W 20 1.567 0 0.126 1.109 9.320 49.545 25.065 9.320 LGA A 21 A 21 1.201 0 0.073 0.068 4.682 35.909 36.364 - LGA S 22 S 22 7.370 0 0.048 0.636 9.960 0.455 0.303 9.333 LGA L 23 L 23 8.661 0 0.034 0.407 11.331 0.000 0.000 6.529 LGA A 24 A 24 8.924 0 0.029 0.030 12.030 0.000 0.000 - LGA A 25 A 25 10.192 0 0.049 0.048 14.483 0.000 0.000 - LGA N 26 N 26 15.868 0 0.018 0.914 19.544 0.000 0.000 17.434 LGA E 27 E 27 18.125 0 0.085 1.184 21.455 0.000 0.000 16.120 LGA L 28 L 28 18.458 0 0.258 0.771 20.757 0.000 0.000 15.387 LGA R 29 R 29 20.409 0 0.461 1.439 30.760 0.000 0.000 30.760 LGA V 30 V 30 18.924 0 0.167 0.373 21.733 0.000 0.000 19.519 LGA T 31 T 31 15.319 0 0.091 0.145 17.286 0.000 0.000 17.286 LGA E 32 E 32 16.326 0 0.025 0.961 21.776 0.000 0.000 21.776 LGA R 33 R 33 15.214 0 0.067 1.257 24.329 0.000 0.000 24.329 LGA P 34 P 34 15.521 0 0.635 0.629 18.230 0.000 0.000 14.665 LGA F 35 F 35 17.146 0 0.639 1.197 19.175 0.000 0.000 15.180 LGA W 36 W 36 22.148 0 0.629 1.181 26.115 0.000 0.000 25.291 LGA I 37 I 37 27.325 0 0.104 0.941 30.812 0.000 0.000 27.637 LGA S 38 S 38 30.161 0 0.090 0.641 32.082 0.000 0.000 28.905 LGA S 39 S 39 28.200 0 0.139 0.555 30.688 0.000 0.000 24.706 LGA F 40 F 40 32.704 0 0.080 0.874 36.788 0.000 0.000 32.861 LGA I 41 I 41 38.360 0 0.616 0.507 41.739 0.000 0.000 38.365 LGA G 42 G 42 38.832 0 0.199 0.199 38.832 0.000 0.000 - LGA R 43 R 43 37.676 0 0.018 1.095 40.734 0.000 0.000 31.950 LGA S 44 S 44 41.548 0 0.650 0.930 44.942 0.000 0.000 44.942 LGA K 45 K 45 41.277 0 0.033 0.863 42.057 0.000 0.000 40.744 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 13.480 13.382 14.001 13.492 10.137 2.442 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 13 2.34 34.659 30.293 0.533 LGA_LOCAL RMSD: 2.339 Number of atoms: 13 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 18.889 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 13.480 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.930857 * X + -0.365332 * Y + -0.006170 * Z + -51.039799 Y_new = -0.193304 * X + -0.506721 * Y + 0.840159 * Z + 46.075272 Z_new = -0.310064 * X + -0.780875 * Y + -0.542305 * Z + 24.252752 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.204752 0.315260 -2.177810 [DEG: -11.7314 18.0631 -124.7793 ] ZXZ: -3.134249 2.143974 -2.763613 [DEG: -179.5793 122.8407 -158.3434 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: S0953s2TS122_3-D1 REMARK 2: S0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap S0953s2TS122_3-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 13 2.34 30.293 13.48 REMARK ---------------------------------------------------------- MOLECULE S0953s2TS122_3-D1 PFRMAT TS TARGET S0953s2 MODEL 3 PARENT N/A ATOM 12 N ALA 2 11.253 42.128 5.996 1.00 11.42 N ATOM 14 CA ALA 2 12.160 41.939 4.850 1.00 11.32 C ATOM 15 CB ALA 2 11.861 40.612 4.154 1.00 10.81 C ATOM 16 C ALA 2 12.054 43.099 3.849 1.00 11.93 C ATOM 17 O ALA 2 11.018 43.772 3.790 1.00 12.43 O ATOM 18 N VAL 3 13.129 43.315 3.075 1.00 12.03 N ATOM 20 CA VAL 3 13.224 44.379 2.055 1.00 12.76 C ATOM 21 CB VAL 3 14.619 45.156 2.171 1.00 13.58 C ATOM 22 CG1 VAL 3 15.823 44.246 1.853 1.00 13.38 C ATOM 23 CG2 VAL 3 14.626 46.441 1.325 1.00 14.34 C ATOM 24 C VAL 3 12.948 43.816 0.632 1.00 12.63 C ATOM 25 O VAL 3 12.464 44.546 -0.244 1.00 13.29 O ATOM 26 N GLN 4 13.243 42.522 0.442 1.00 11.89 N ATOM 28 CA GLN 4 13.056 41.807 -0.836 1.00 11.85 C ATOM 29 CB GLN 4 14.277 40.907 -1.150 1.00 11.91 C ATOM 30 CG GLN 4 14.803 40.008 -0.009 1.00 11.46 C ATOM 31 CD GLN 4 15.998 39.173 -0.430 1.00 11.76 C ATOM 32 OE1 GLN 4 17.145 39.597 -0.288 1.00 12.41 O ATOM 33 NE2 GLN 4 15.734 37.980 -0.950 1.00 11.43 N ATOM 36 C GLN 4 11.737 41.012 -0.927 1.00 11.60 C ATOM 37 O GLN 4 11.204 40.812 -2.025 1.00 11.95 O ATOM 38 N GLY 5 11.226 40.587 0.233 1.00 11.11 N ATOM 40 CA GLY 5 9.985 39.823 0.302 1.00 10.91 C ATOM 41 C GLY 5 8.852 40.574 1.003 1.00 10.51 C ATOM 42 O GLY 5 8.434 41.602 0.460 1.00 10.66 O ATOM 43 N PRO 6 8.314 40.112 2.174 1.00 10.17 N ATOM 44 CD PRO 6 7.389 41.022 2.885 1.00 10.56 C ATOM 45 CA PRO 6 8.599 38.926 3.016 1.00 9.64 C ATOM 46 CB PRO 6 7.823 39.223 4.307 1.00 9.76 C ATOM 47 CG PRO 6 6.690 40.111 3.857 1.00 10.18 C ATOM 48 C PRO 6 8.235 37.540 2.424 1.00 8.78 C ATOM 49 O PRO 6 7.285 37.431 1.640 1.00 8.27 O ATOM 50 N TRP 7 9.001 36.511 2.813 1.00 8.85 N ATOM 52 CA TRP 7 8.815 35.120 2.362 1.00 8.34 C ATOM 53 CB TRP 7 10.149 34.533 1.848 1.00 8.31 C ATOM 54 CG TRP 7 10.771 35.231 0.614 1.00 8.27 C ATOM 55 CD2 TRP 7 10.508 34.956 -0.781 1.00 8.13 C ATOM 56 CE2 TRP 7 11.343 35.821 -1.542 1.00 8.44 C ATOM 57 CE3 TRP 7 9.649 34.063 -1.464 1.00 8.00 C ATOM 58 CD1 TRP 7 11.727 36.222 0.627 1.00 8.64 C ATOM 59 NE1 TRP 7 12.069 36.574 -0.656 1.00 8.71 N ATOM 61 CZ2 TRP 7 11.349 35.825 -2.959 1.00 8.67 C ATOM 62 CZ3 TRP 7 9.652 34.065 -2.882 1.00 8.27 C ATOM 63 CH2 TRP 7 10.502 34.945 -3.608 1.00 8.62 C ATOM 64 C TRP 7 8.259 34.234 3.488 1.00 8.48 C ATOM 65 O TRP 7 7.498 33.295 3.221 1.00 8.91 O ATOM 66 N VAL 8 8.643 34.552 4.735 1.00 8.31 N ATOM 68 CA VAL 8 8.218 33.823 5.951 1.00 8.56 C ATOM 69 CB VAL 8 9.445 33.487 6.899 1.00 9.01 C ATOM 70 CG1 VAL 8 9.092 32.361 7.888 1.00 9.28 C ATOM 71 CG2 VAL 8 10.675 33.083 6.081 1.00 9.61 C ATOM 72 C VAL 8 7.177 34.681 6.704 1.00 8.22 C ATOM 73 O VAL 8 6.250 34.140 7.320 1.00 7.81 O ATOM 74 N GLY 9 7.335 36.009 6.620 1.00 8.61 N ATOM 76 CA GLY 9 6.440 36.965 7.271 1.00 8.63 C ATOM 77 C GLY 9 5.023 37.055 6.715 1.00 8.81 C ATOM 78 O GLY 9 4.068 37.226 7.482 1.00 8.60 O ATOM 79 N SER 10 4.905 36.936 5.386 1.00 9.39 N ATOM 81 CA SER 10 3.630 36.994 4.645 1.00 9.94 C ATOM 82 CB SER 10 3.900 37.153 3.143 1.00 10.83 C ATOM 83 OG SER 10 4.753 36.131 2.654 1.00 10.86 O ATOM 85 C SER 10 2.681 35.802 4.887 1.00 9.66 C ATOM 86 O SER 10 1.458 35.983 4.927 1.00 9.99 O ATOM 87 N SER 11 3.260 34.601 5.028 1.00 9.26 N ATOM 89 CA SER 11 2.532 33.335 5.267 1.00 9.25 C ATOM 90 OG SER 11 3.967 32.119 3.720 1.00 10.10 O ATOM 92 C SER 11 1.857 33.217 6.646 1.00 8.65 C ATOM 93 O SER 11 0.746 32.681 6.746 1.00 9.03 O ATOM 94 CB SER 11 3.464 32.139 5.044 1.00 9.28 C ATOM 95 N TYR 12 2.533 33.734 7.690 1.00 7.91 N ATOM 97 CA TYR 12 2.106 33.743 9.119 1.00 7.39 C ATOM 98 CB TYR 12 0.817 34.585 9.346 1.00 7.70 C ATOM 99 CG TYR 12 0.927 36.093 9.095 1.00 8.35 C ATOM 100 CD1 TYR 12 1.328 36.980 10.127 1.00 8.36 C ATOM 101 CE1 TYR 12 1.397 38.385 9.909 1.00 9.13 C ATOM 102 CD2 TYR 12 0.596 36.653 7.837 1.00 9.16 C ATOM 103 CE2 TYR 12 0.662 38.056 7.610 1.00 9.95 C ATOM 104 CZ TYR 12 1.062 38.909 8.651 1.00 9.91 C ATOM 105 OH TYR 12 1.126 40.268 8.433 1.00 10.78 O ATOM 107 C TYR 12 1.977 32.378 9.828 1.00 6.63 C ATOM 108 O TYR 12 2.293 32.273 11.020 1.00 6.09 O ATOM 109 N VAL 13 1.526 31.352 9.090 1.00 6.86 N ATOM 111 CA VAL 13 1.334 29.972 9.594 1.00 6.64 C ATOM 112 CB VAL 13 0.432 29.106 8.628 1.00 7.36 C ATOM 113 CG1 VAL 13 -1.024 29.525 8.766 1.00 7.65 C ATOM 114 CG2 VAL 13 0.875 29.236 7.152 1.00 7.76 C ATOM 115 C VAL 13 2.634 29.209 9.955 1.00 6.74 C ATOM 116 O VAL 13 2.666 28.467 10.947 1.00 6.44 O ATOM 117 N ALA 14 3.688 29.425 9.153 1.00 7.40 N ATOM 119 CA ALA 14 5.019 28.802 9.316 1.00 7.91 C ATOM 120 CB ALA 14 5.856 29.027 8.063 1.00 8.96 C ATOM 121 C ALA 14 5.794 29.273 10.561 1.00 7.50 C ATOM 122 O ALA 14 6.493 28.473 11.194 1.00 7.72 O ATOM 123 N GLU 15 5.657 30.566 10.892 1.00 7.16 N ATOM 125 CA GLU 15 6.318 31.219 12.045 1.00 7.03 C ATOM 126 CB GLU 15 6.195 32.746 11.943 1.00 7.33 C ATOM 127 CG GLU 15 6.999 33.380 10.810 1.00 8.23 C ATOM 128 CD GLU 15 6.846 34.888 10.755 1.00 8.82 C ATOM 129 OE1 GLU 15 5.924 35.370 10.064 1.00 9.06 O ATOM 130 OE2 GLU 15 7.650 35.594 11.402 1.00 9.26 O ATOM 131 C GLU 15 5.827 30.755 13.429 1.00 6.20 C ATOM 132 O GLU 15 6.634 30.621 14.357 1.00 6.42 O ATOM 133 N THR 16 4.511 30.513 13.549 1.00 5.48 N ATOM 135 CA THR 16 3.866 30.063 14.801 1.00 4.95 C ATOM 136 CB THR 16 2.549 30.851 15.093 1.00 4.56 C ATOM 137 OG1 THR 16 1.709 30.840 13.931 1.00 4.77 O ATOM 139 CG2 THR 16 2.855 32.291 15.489 1.00 4.36 C ATOM 140 C THR 16 3.584 28.550 14.818 1.00 5.12 C ATOM 141 O THR 16 3.936 27.869 15.789 1.00 5.36 O ATOM 142 N GLY 17 2.958 28.040 13.748 1.00 5.29 N ATOM 144 CA GLY 17 2.633 26.620 13.627 1.00 5.88 C ATOM 145 C GLY 17 1.321 26.187 14.266 1.00 5.96 C ATOM 146 O GLY 17 0.779 25.132 13.911 1.00 6.33 O ATOM 147 N GLN 18 0.824 27.003 15.204 1.00 5.90 N ATOM 149 CA GLN 18 -0.427 26.752 15.942 1.00 6.15 C ATOM 150 CB GLN 18 -0.224 26.992 17.446 1.00 6.33 C ATOM 151 CG GLN 18 0.674 25.974 18.141 1.00 6.94 C ATOM 152 CD GLN 18 0.841 26.257 19.622 1.00 7.46 C ATOM 153 OE1 GLN 18 1.763 26.964 20.030 1.00 7.95 O ATOM 154 NE2 GLN 18 -0.053 25.706 20.436 1.00 7.62 N ATOM 157 C GLN 18 -1.602 27.606 15.435 1.00 5.98 C ATOM 158 O GLN 18 -2.762 27.187 15.538 1.00 6.13 O ATOM 159 N ASN 19 -1.285 28.783 14.875 1.00 5.97 N ATOM 161 CA ASN 19 -2.276 29.737 14.340 1.00 6.01 C ATOM 162 CB ASN 19 -1.872 31.182 14.677 1.00 5.98 C ATOM 163 CG ASN 19 -1.903 31.473 16.175 1.00 6.73 C ATOM 164 OD1 ASN 19 -0.902 31.303 16.873 1.00 7.52 O ATOM 165 ND2 ASN 19 -3.051 31.929 16.668 1.00 6.73 N ATOM 168 C ASN 19 -2.490 29.595 12.822 1.00 6.03 C ATOM 169 O ASN 19 -1.528 29.369 12.076 1.00 6.47 O ATOM 170 N TRP 20 -3.754 29.710 12.392 1.00 5.95 N ATOM 172 CA TRP 20 -4.166 29.606 10.980 1.00 6.39 C ATOM 173 CB TRP 20 -5.261 28.514 10.802 1.00 7.36 C ATOM 174 CG TRP 20 -6.428 28.506 11.835 1.00 8.25 C ATOM 175 CD2 TRP 20 -6.485 27.793 13.092 1.00 9.12 C ATOM 176 CE2 TRP 20 -7.757 28.068 13.670 1.00 9.92 C ATOM 177 CE3 TRP 20 -5.587 26.950 13.786 1.00 9.49 C ATOM 178 CD1 TRP 20 -7.634 29.158 11.719 1.00 8.63 C ATOM 179 NE1 TRP 20 -8.427 28.898 12.811 1.00 9.62 N ATOM 181 CZ2 TRP 20 -8.161 27.529 14.916 1.00 10.98 C ATOM 182 CZ3 TRP 20 -5.990 26.408 15.034 1.00 10.58 C ATOM 183 CH2 TRP 20 -7.270 26.706 15.580 1.00 11.27 C ATOM 184 C TRP 20 -4.609 30.960 10.381 1.00 5.72 C ATOM 185 O TRP 20 -5.701 31.459 10.687 1.00 5.35 O ATOM 186 N ALA 21 -3.718 31.561 9.576 1.00 5.86 N ATOM 188 CA ALA 21 -3.929 32.857 8.898 1.00 5.80 C ATOM 189 CB ALA 21 -2.595 33.401 8.391 1.00 6.37 C ATOM 190 C ALA 21 -4.968 32.864 7.760 1.00 6.09 C ATOM 191 O ALA 21 -5.815 33.765 7.703 1.00 5.94 O ATOM 192 N SER 22 -4.902 31.850 6.882 1.00 6.73 N ATOM 194 CA SER 22 -5.796 31.689 5.715 1.00 7.24 C ATOM 195 CB SER 22 -5.243 30.618 4.767 1.00 8.31 C ATOM 196 OG SER 22 -3.956 30.971 4.290 1.00 9.08 O ATOM 198 C SER 22 -7.268 31.380 6.054 1.00 6.69 C ATOM 199 O SER 22 -8.172 31.998 5.478 1.00 6.67 O ATOM 200 N LEU 23 -7.489 30.440 6.985 1.00 6.45 N ATOM 202 CA LEU 23 -8.832 30.022 7.443 1.00 6.19 C ATOM 203 CB LEU 23 -8.753 28.716 8.261 1.00 6.72 C ATOM 204 CG LEU 23 -8.415 27.370 7.592 1.00 7.79 C ATOM 205 CD1 LEU 23 -7.452 26.596 8.477 1.00 8.36 C ATOM 206 CD2 LEU 23 -9.674 26.532 7.309 1.00 8.60 C ATOM 207 C LEU 23 -9.559 31.112 8.250 1.00 5.35 C ATOM 208 O LEU 23 -10.765 31.318 8.068 1.00 5.19 O ATOM 209 N ALA 24 -8.805 31.816 9.109 1.00 5.03 N ATOM 211 CA ALA 24 -9.311 32.910 9.965 1.00 4.76 C ATOM 212 CB ALA 24 -8.267 33.288 11.010 1.00 4.85 C ATOM 213 C ALA 24 -9.719 34.147 9.146 1.00 4.87 C ATOM 214 O ALA 24 -10.783 34.726 9.389 1.00 5.00 O ATOM 215 N ALA 25 -8.880 34.504 8.160 1.00 5.24 N ATOM 217 CA ALA 25 -9.085 35.651 7.251 1.00 5.92 C ATOM 218 CB ALA 25 -7.813 35.922 6.456 1.00 6.66 C ATOM 219 C ALA 25 -10.273 35.442 6.297 1.00 6.05 C ATOM 220 O ALA 25 -11.020 36.389 6.021 1.00 6.45 O ATOM 221 N ASN 26 -10.425 34.203 5.806 1.00 5.94 N ATOM 223 CA ASN 26 -11.506 33.785 4.887 1.00 6.18 C ATOM 224 CB ASN 26 -11.186 32.397 4.296 1.00 6.67 C ATOM 225 CG ASN 26 -11.775 32.190 2.898 1.00 7.48 C ATOM 226 OD1 ASN 26 -11.129 32.481 1.889 1.00 8.20 O ATOM 227 ND2 ASN 26 -12.999 31.671 2.839 1.00 7.58 N ATOM 230 C ASN 26 -12.884 33.772 5.589 1.00 5.54 C ATOM 231 O ASN 26 -13.888 34.173 4.988 1.00 5.75 O ATOM 232 N GLU 27 -12.905 33.310 6.850 1.00 4.98 N ATOM 234 CA GLU 27 -14.116 33.220 7.693 1.00 4.76 C ATOM 235 CG GLU 27 -13.870 30.833 8.618 1.00 5.26 C ATOM 236 CD GLU 27 -13.618 29.988 9.853 1.00 5.82 C ATOM 237 OE1 GLU 27 -14.598 29.618 10.533 1.00 6.15 O ATOM 238 OE2 GLU 27 -12.440 29.689 10.142 1.00 6.19 O ATOM 239 C GLU 27 -14.718 34.564 8.142 1.00 4.97 C ATOM 240 O GLU 27 -15.944 34.724 8.112 1.00 5.15 O ATOM 241 CB GLU 27 -13.865 32.328 8.916 1.00 4.81 C ATOM 242 N LEU 28 -13.859 35.512 8.550 1.00 5.26 N ATOM 244 CA LEU 28 -14.274 36.856 9.010 1.00 6.04 C ATOM 245 CB LEU 28 -13.129 37.568 9.780 1.00 6.48 C ATOM 246 CG LEU 28 -11.693 37.875 9.292 1.00 6.86 C ATOM 247 CD1 LEU 28 -11.605 39.211 8.536 1.00 8.02 C ATOM 248 CD2 LEU 28 -10.773 37.918 10.501 1.00 6.64 C ATOM 249 C LEU 28 -14.858 37.769 7.910 1.00 6.64 C ATOM 250 O LEU 28 -15.885 38.417 8.132 1.00 7.25 O ATOM 251 N ARG 29 -14.204 37.771 6.734 1.00 6.71 N ATOM 253 CA ARG 29 -14.541 38.554 5.510 1.00 7.53 C ATOM 254 CB ARG 29 -15.264 37.680 4.444 1.00 8.19 C ATOM 255 CG ARG 29 -16.536 36.926 4.886 1.00 8.17 C ATOM 256 CD ARG 29 -17.126 36.120 3.740 1.00 9.10 C ATOM 257 NE ARG 29 -18.335 35.396 4.140 1.00 9.15 N ATOM 259 CZ ARG 29 -19.060 34.611 3.343 1.00 10.07 C ATOM 260 NH1 ARG 29 -20.138 34.008 3.823 1.00 10.29 N ATOM 263 NH2 ARG 29 -18.722 34.422 2.070 1.00 10.90 N ATOM 266 C ARG 29 -15.189 39.960 5.619 1.00 7.13 C ATOM 267 O ARG 29 -14.578 40.950 5.199 1.00 6.92 O ATOM 268 N VAL 30 -16.407 40.022 6.179 1.00 7.24 N ATOM 270 CA VAL 30 -17.177 41.272 6.363 1.00 7.03 C ATOM 271 CB VAL 30 -18.688 41.117 5.901 1.00 7.47 C ATOM 272 CG1 VAL 30 -19.311 42.488 5.584 1.00 7.48 C ATOM 273 CG2 VAL 30 -18.797 40.209 4.674 1.00 8.41 C ATOM 274 C VAL 30 -17.127 41.680 7.855 1.00 6.91 C ATOM 275 O VAL 30 -16.953 40.820 8.727 1.00 6.76 O ATOM 276 N THR 31 -17.272 42.988 8.120 1.00 7.34 N ATOM 278 CA THR 31 -17.268 43.572 9.478 1.00 7.69 C ATOM 279 CB THR 31 -16.676 45.016 9.480 1.00 8.47 C ATOM 280 OG1 THR 31 -17.296 45.798 8.452 1.00 8.31 O ATOM 282 CG2 THR 31 -15.168 44.982 9.256 1.00 9.27 C ATOM 283 C THR 31 -18.699 43.590 10.056 1.00 7.44 C ATOM 284 O THR 31 -18.884 43.498 11.279 1.00 7.89 O ATOM 285 N GLU 32 -19.688 43.667 9.154 1.00 6.99 N ATOM 287 CA GLU 32 -21.125 43.685 9.488 1.00 7.05 C ATOM 288 CB GLU 32 -21.806 44.947 8.926 1.00 7.21 C ATOM 289 CG GLU 32 -21.351 46.259 9.562 1.00 7.94 C ATOM 290 CD GLU 32 -22.037 47.470 8.961 1.00 8.42 C ATOM 291 OE1 GLU 32 -23.108 47.865 9.469 1.00 9.05 O ATOM 292 OE2 GLU 32 -21.505 48.032 7.979 1.00 8.39 O ATOM 293 C GLU 32 -21.809 42.426 8.930 1.00 7.01 C ATOM 294 O GLU 32 -21.565 42.042 7.778 1.00 7.21 O ATOM 295 N ARG 33 -22.638 41.779 9.771 1.00 7.03 N ATOM 297 CA ARG 33 -23.420 40.543 9.481 1.00 7.38 C ATOM 298 CB ARG 33 -24.473 40.758 8.366 1.00 7.43 C ATOM 299 CG ARG 33 -25.515 41.839 8.658 1.00 7.41 C ATOM 300 CD ARG 33 -26.521 41.997 7.519 1.00 7.79 C ATOM 301 NE ARG 33 -25.927 42.583 6.312 1.00 7.62 N ATOM 303 CZ ARG 33 -26.582 42.828 5.176 1.00 8.14 C ATOM 304 NH1 ARG 33 -25.932 43.362 4.150 1.00 8.21 N ATOM 307 NH2 ARG 33 -27.876 42.547 5.051 1.00 8.85 N ATOM 310 C ARG 33 -22.528 39.311 9.155 1.00 8.26 C ATOM 311 O ARG 33 -21.730 39.385 8.209 1.00 8.68 O ATOM 312 N PRO 34 -22.607 38.187 9.942 1.00 8.77 N ATOM 313 CD PRO 34 -21.788 37.079 9.398 1.00 9.76 C ATOM 314 CA PRO 34 -23.334 37.684 11.133 1.00 8.79 C ATOM 315 CB PRO 34 -22.776 36.270 11.306 1.00 9.86 C ATOM 316 CG PRO 34 -22.497 35.853 9.924 1.00 10.49 C ATOM 317 C PRO 34 -23.186 38.493 12.437 1.00 8.43 C ATOM 318 O PRO 34 -24.123 38.533 13.244 1.00 8.05 O ATOM 319 N PHE 35 -22.012 39.114 12.628 1.00 8.70 N ATOM 321 CA PHE 35 -21.659 39.915 13.823 1.00 8.57 C ATOM 322 CB PHE 35 -20.207 40.452 13.687 1.00 9.27 C ATOM 323 CG PHE 35 -19.475 40.688 15.015 1.00 9.98 C ATOM 324 CD1 PHE 35 -18.695 39.664 15.604 1.00 10.63 C ATOM 325 CD2 PHE 35 -19.534 41.947 15.660 1.00 10.20 C ATOM 326 CE1 PHE 35 -17.983 39.887 16.815 1.00 11.36 C ATOM 327 CE2 PHE 35 -18.827 42.184 16.872 1.00 10.99 C ATOM 328 CZ PHE 35 -18.050 41.151 17.450 1.00 11.51 C ATOM 329 C PHE 35 -22.635 41.080 14.113 1.00 7.58 C ATOM 330 O PHE 35 -22.909 41.367 15.284 1.00 7.38 O ATOM 331 N TRP 36 -23.144 41.731 13.055 1.00 7.08 N ATOM 333 CA TRP 36 -24.111 42.846 13.162 1.00 6.32 C ATOM 334 CB TRP 36 -24.264 43.569 11.799 1.00 6.24 C ATOM 335 CG TRP 36 -24.877 45.000 11.826 1.00 6.77 C ATOM 336 CD2 TRP 36 -26.275 45.361 11.747 1.00 7.32 C ATOM 337 CE2 TRP 36 -26.341 46.784 11.776 1.00 7.76 C ATOM 338 CE3 TRP 36 -27.478 44.625 11.654 1.00 7.69 C ATOM 339 CD1 TRP 36 -24.186 46.188 11.898 1.00 7.02 C ATOM 340 NE1 TRP 36 -25.057 47.252 11.869 1.00 7.60 N ATOM 342 CZ2 TRP 36 -27.566 47.492 11.716 1.00 8.41 C ATOM 343 CZ3 TRP 36 -28.707 45.331 11.594 1.00 8.40 C ATOM 344 CH2 TRP 36 -28.732 46.753 11.625 1.00 8.69 C ATOM 345 C TRP 36 -25.477 42.327 13.665 1.00 5.73 C ATOM 346 O TRP 36 -26.134 42.995 14.474 1.00 5.39 O ATOM 347 N ILE 37 -25.872 41.136 13.186 1.00 5.85 N ATOM 349 CA ILE 37 -27.137 40.459 13.560 1.00 5.71 C ATOM 350 CB ILE 37 -27.474 39.232 12.583 1.00 6.04 C ATOM 351 CG2 ILE 37 -28.830 38.555 12.956 1.00 6.88 C ATOM 352 CG1 ILE 37 -27.391 39.636 11.082 1.00 5.90 C ATOM 353 CD1 ILE 37 -28.504 40.581 10.467 1.00 5.67 C ATOM 354 C ILE 37 -27.065 39.995 15.036 1.00 6.08 C ATOM 355 O ILE 37 -28.026 40.186 15.790 1.00 5.94 O ATOM 356 N SER 38 -25.907 39.444 15.432 1.00 6.73 N ATOM 358 CA SER 38 -25.643 38.946 16.799 1.00 7.28 C ATOM 359 CB SER 38 -24.335 38.149 16.834 1.00 8.22 C ATOM 360 OG SER 38 -24.389 37.034 15.961 1.00 8.44 O ATOM 362 C SER 38 -25.592 40.087 17.831 1.00 6.89 C ATOM 363 O SER 38 -26.066 39.922 18.963 1.00 7.01 O ATOM 364 N SER 39 -25.013 41.226 17.421 1.00 6.57 N ATOM 366 CA SER 39 -24.879 42.447 18.243 1.00 6.32 C ATOM 367 CB SER 39 -23.896 43.425 17.585 1.00 6.53 C ATOM 368 OG SER 39 -23.582 44.515 18.438 1.00 6.59 O ATOM 370 C SER 39 -26.236 43.139 18.487 1.00 5.64 C ATOM 371 O SER 39 -26.477 43.660 19.581 1.00 5.61 O ATOM 372 N PHE 40 -27.101 43.123 17.459 1.00 5.25 N ATOM 374 CA PHE 40 -28.452 43.728 17.477 1.00 4.93 C ATOM 375 CB PHE 40 -29.019 43.803 16.031 1.00 4.75 C ATOM 376 CG PHE 40 -30.039 44.922 15.792 1.00 4.82 C ATOM 377 CD1 PHE 40 -29.623 46.200 15.345 1.00 4.89 C ATOM 378 CD2 PHE 40 -31.424 44.692 15.974 1.00 5.32 C ATOM 379 CE1 PHE 40 -30.566 47.232 15.085 1.00 5.37 C ATOM 380 CE2 PHE 40 -32.380 45.714 15.718 1.00 5.78 C ATOM 381 CZ PHE 40 -31.948 46.987 15.272 1.00 5.77 C ATOM 382 C PHE 40 -29.440 42.992 18.413 1.00 5.21 C ATOM 383 O PHE 40 -30.163 43.643 19.176 1.00 5.33 O ATOM 384 N ILE 41 -29.457 41.651 18.339 1.00 5.59 N ATOM 386 CA ILE 41 -30.330 40.778 19.160 1.00 6.21 C ATOM 387 CB ILE 41 -30.387 39.291 18.602 1.00 6.77 C ATOM 388 CG2 ILE 41 -31.421 38.440 19.407 1.00 7.29 C ATOM 389 CG1 ILE 41 -30.803 39.295 17.118 1.00 7.06 C ATOM 390 CD1 ILE 41 -30.318 38.088 16.286 1.00 7.49 C ATOM 391 C ILE 41 -29.912 40.802 20.650 1.00 6.54 C ATOM 392 O ILE 41 -30.775 40.766 21.535 1.00 6.94 O ATOM 393 N GLY 42 -28.599 40.885 20.900 1.00 6.51 N ATOM 395 CA GLY 42 -28.057 40.910 22.257 1.00 6.90 C ATOM 396 C GLY 42 -28.042 42.269 22.948 1.00 6.55 C ATOM 397 O GLY 42 -27.117 42.562 23.716 1.00 6.45 O ATOM 398 N ARG 43 -29.067 43.084 22.666 1.00 6.65 N ATOM 400 CA ARG 43 -29.238 44.431 23.237 1.00 6.51 C ATOM 401 CB ARG 43 -29.340 45.490 22.128 1.00 7.45 C ATOM 402 CG ARG 43 -28.031 45.792 21.413 1.00 8.37 C ATOM 403 CD ARG 43 -28.219 46.847 20.335 1.00 9.43 C ATOM 404 NE ARG 43 -26.969 47.151 19.635 1.00 9.96 N ATOM 406 CZ ARG 43 -26.838 48.035 18.646 1.00 11.01 C ATOM 407 NH1 ARG 43 -25.648 48.223 18.091 1.00 11.75 N ATOM 410 NH2 ARG 43 -27.879 48.734 18.205 1.00 11.45 N ATOM 413 C ARG 43 -30.495 44.491 24.120 1.00 5.71 C ATOM 414 O ARG 43 -31.428 43.706 23.916 1.00 5.19 O ATOM 415 N SER 44 -30.496 45.410 25.096 1.00 5.85 N ATOM 417 CA SER 44 -31.614 45.616 26.037 1.00 5.40 C ATOM 418 CB SER 44 -31.115 45.547 27.487 1.00 5.56 C ATOM 419 OG SER 44 -32.192 45.494 28.410 1.00 6.27 O ATOM 421 C SER 44 -32.285 46.976 25.779 1.00 4.80 C ATOM 422 O SER 44 -33.506 47.104 25.939 1.00 4.67 O ATOM 423 N LYS 45 -31.477 47.969 25.379 1.00 4.79 N ATOM 425 CA LYS 45 -31.934 49.341 25.088 1.00 4.58 C ATOM 426 CG LYS 45 -31.155 50.406 27.308 1.00 5.30 C ATOM 427 CD LYS 45 -30.233 51.460 27.913 1.00 6.12 C ATOM 428 CE LYS 45 -30.332 51.509 29.436 1.00 6.38 C ATOM 429 NZ LYS 45 -29.780 50.297 30.110 1.00 5.94 N ATOM 433 C LYS 45 -31.978 49.637 23.582 1.00 4.53 C ATOM 434 O LYS 45 -31.202 49.057 22.813 1.00 4.60 O ATOM 435 CB LYS 45 -31.040 50.374 25.790 1.00 5.15 C TER END