####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name S0953s2TS122_2-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name S0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap S0953s2TS122_2-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 22 2 - 23 4.93 16.29 LONGEST_CONTINUOUS_SEGMENT: 22 3 - 24 4.96 16.29 LCS_AVERAGE: 48.45 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 7 - 17 1.75 22.04 LONGEST_CONTINUOUS_SEGMENT: 11 19 - 29 1.76 17.40 LONGEST_CONTINUOUS_SEGMENT: 11 20 - 30 1.85 16.72 LCS_AVERAGE: 20.09 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 8 - 17 0.49 21.63 LONGEST_CONTINUOUS_SEGMENT: 10 20 - 29 0.72 17.48 LCS_AVERAGE: 15.60 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 4 22 3 3 4 4 4 5 8 10 15 16 19 21 24 26 29 29 30 31 33 34 LCS_GDT V 3 V 3 5 7 22 3 4 6 7 10 10 11 13 15 16 19 21 24 26 29 29 30 31 33 34 LCS_GDT Q 4 Q 4 5 7 22 3 4 6 7 10 10 11 13 15 16 19 21 24 26 29 29 30 31 33 34 LCS_GDT G 5 G 5 5 7 22 3 4 6 7 10 10 11 13 15 17 19 21 24 26 29 29 30 31 33 34 LCS_GDT P 6 P 6 5 7 22 3 4 6 7 10 10 11 13 15 17 19 21 24 26 29 29 30 31 33 34 LCS_GDT W 7 W 7 5 11 22 3 4 6 7 10 10 11 13 15 17 19 21 24 26 29 29 30 31 33 34 LCS_GDT V 8 V 8 10 11 22 5 10 10 10 10 10 11 13 15 17 19 21 24 26 29 29 30 31 33 34 LCS_GDT G 9 G 9 10 11 22 8 10 10 10 10 10 11 13 15 17 19 21 24 26 29 29 30 31 33 34 LCS_GDT S 10 S 10 10 11 22 8 10 10 10 10 10 11 12 13 17 19 21 24 26 29 29 30 31 33 34 LCS_GDT S 11 S 11 10 11 22 8 10 10 10 10 10 11 12 13 17 19 21 24 26 29 29 30 31 33 34 LCS_GDT Y 12 Y 12 10 11 22 8 10 10 10 10 10 11 13 15 17 19 21 24 26 29 29 30 31 33 34 LCS_GDT V 13 V 13 10 11 22 8 10 10 10 10 10 11 13 15 17 19 21 24 26 29 29 30 31 33 34 LCS_GDT A 14 A 14 10 11 22 8 10 10 10 10 10 11 12 13 17 19 21 24 26 29 29 30 31 33 34 LCS_GDT E 15 E 15 10 11 22 8 10 10 10 10 10 11 12 13 17 17 20 20 26 29 29 30 31 33 34 LCS_GDT T 16 T 16 10 11 22 8 10 10 10 10 10 11 12 13 17 18 21 23 26 29 29 30 31 33 34 LCS_GDT G 17 G 17 10 11 22 4 10 10 10 10 10 11 13 15 17 19 21 24 26 29 29 30 31 33 34 LCS_GDT Q 18 Q 18 3 7 22 0 3 4 5 6 8 10 12 14 17 18 21 24 25 27 29 30 31 33 34 LCS_GDT N 19 N 19 3 11 22 3 3 4 5 7 10 12 13 14 14 16 19 20 22 24 26 28 30 33 34 LCS_GDT W 20 W 20 10 11 22 6 9 10 10 10 10 12 13 14 17 17 20 20 22 24 25 27 29 32 34 LCS_GDT A 21 A 21 10 11 22 6 9 10 10 10 10 12 13 14 17 17 20 21 22 24 25 27 28 30 32 LCS_GDT S 22 S 22 10 11 22 6 9 10 10 10 10 12 13 14 17 17 20 21 22 24 25 27 30 33 34 LCS_GDT L 23 L 23 10 11 22 6 9 10 10 10 10 12 13 15 16 19 21 24 26 29 29 30 31 33 34 LCS_GDT A 24 A 24 10 11 22 6 9 10 10 10 10 12 13 14 15 19 21 24 26 29 29 30 31 33 34 LCS_GDT A 25 A 25 10 11 21 6 9 10 10 10 10 12 13 14 16 19 21 24 26 29 29 30 31 33 34 LCS_GDT N 26 N 26 10 11 21 4 9 10 10 10 10 12 14 16 17 18 21 24 26 29 29 30 31 33 34 LCS_GDT E 27 E 27 10 11 21 4 9 10 10 10 10 12 14 16 17 18 21 24 26 29 29 30 31 33 34 LCS_GDT L 28 L 28 10 11 21 3 9 10 10 10 10 12 14 16 17 18 21 24 26 29 29 30 31 33 34 LCS_GDT R 29 R 29 10 11 21 3 9 10 10 10 10 12 14 16 17 18 21 24 26 29 29 30 31 33 34 LCS_GDT V 30 V 30 4 11 21 3 3 4 7 8 9 12 14 16 17 18 21 24 25 29 29 30 31 33 34 LCS_GDT T 31 T 31 4 7 21 3 3 4 7 8 9 12 14 16 17 17 19 20 20 24 25 29 31 33 34 LCS_GDT E 32 E 32 3 7 21 3 3 4 5 8 9 12 14 16 17 17 19 20 21 29 29 30 31 33 34 LCS_GDT R 33 R 33 3 6 21 3 3 3 7 8 9 12 14 16 17 17 19 21 22 29 29 30 31 33 34 LCS_GDT P 34 P 34 3 6 21 2 3 4 7 8 9 12 14 16 17 19 21 23 26 29 29 30 31 33 34 LCS_GDT F 35 F 35 3 7 21 3 3 4 7 8 9 12 14 16 17 17 21 23 26 29 29 30 31 33 34 LCS_GDT W 36 W 36 6 7 21 3 4 6 6 7 9 12 14 16 17 19 21 24 26 29 29 30 31 33 34 LCS_GDT I 37 I 37 6 7 21 3 5 6 6 7 7 8 14 16 17 17 19 20 25 25 29 29 31 33 34 LCS_GDT S 38 S 38 6 7 21 4 5 6 6 8 9 12 14 16 17 17 19 20 20 24 25 27 28 30 30 LCS_GDT S 39 S 39 6 7 21 4 5 6 6 8 9 12 14 16 17 17 19 20 20 24 26 27 29 32 32 LCS_GDT F 40 F 40 6 7 21 4 5 6 7 8 9 12 14 16 17 17 19 20 20 24 25 27 28 30 30 LCS_GDT I 41 I 41 6 7 21 4 5 6 6 8 9 12 14 16 17 17 19 20 20 24 25 27 28 30 30 LCS_GDT G 42 G 42 3 7 21 3 3 4 4 7 7 8 12 15 17 17 19 20 20 24 25 26 27 30 30 LCS_GDT R 43 R 43 3 5 21 3 3 4 4 5 6 8 9 9 11 14 17 18 20 22 24 25 26 27 27 LCS_GDT S 44 S 44 3 5 18 3 3 4 4 5 6 8 9 9 11 12 13 13 15 16 17 18 18 20 21 LCS_GDT K 45 K 45 3 5 15 0 3 4 4 5 6 8 9 9 11 12 13 13 14 14 17 18 18 18 18 LCS_AVERAGE LCS_A: 28.05 ( 15.60 20.09 48.45 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 8 10 10 10 10 10 12 14 16 17 19 21 24 26 29 29 30 31 33 34 GDT PERCENT_AT 18.18 22.73 22.73 22.73 22.73 22.73 27.27 31.82 36.36 38.64 43.18 47.73 54.55 59.09 65.91 65.91 68.18 70.45 75.00 77.27 GDT RMS_LOCAL 0.36 0.49 0.49 0.49 0.49 0.49 2.28 2.78 3.11 3.38 4.05 4.31 4.72 5.04 5.40 5.40 5.53 5.68 6.24 6.36 GDT RMS_ALL_AT 21.65 21.63 21.63 21.63 21.63 21.63 16.77 17.03 17.50 17.63 12.02 12.03 10.86 11.53 11.71 11.71 11.64 11.55 11.61 11.52 # Checking swapping # possible swapping detected: E 15 E 15 # possible swapping detected: E 27 E 27 # possible swapping detected: E 32 E 32 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 24.640 0 0.617 0.598 26.826 0.000 0.000 - LGA V 3 V 3 27.610 0 0.511 0.836 29.009 0.000 0.000 27.952 LGA Q 4 Q 4 32.253 0 0.092 0.505 39.550 0.000 0.000 39.550 LGA G 5 G 5 33.121 0 0.302 0.302 35.221 0.000 0.000 - LGA P 6 P 6 32.743 0 0.627 0.496 34.902 0.000 0.000 34.822 LGA W 7 W 7 34.011 0 0.146 1.215 39.443 0.000 0.000 39.436 LGA V 8 V 8 27.334 0 0.430 0.510 29.707 0.000 0.000 25.096 LGA G 9 G 9 25.705 0 0.152 0.152 26.620 0.000 0.000 - LGA S 10 S 10 23.469 0 0.076 0.185 25.242 0.000 0.000 25.242 LGA S 11 S 11 22.494 0 0.053 0.061 23.397 0.000 0.000 22.997 LGA Y 12 Y 12 21.891 0 0.053 0.905 28.549 0.000 0.000 28.549 LGA V 13 V 13 19.946 0 0.056 0.871 20.874 0.000 0.000 19.149 LGA A 14 A 14 18.540 0 0.031 0.029 19.324 0.000 0.000 - LGA E 15 E 15 18.680 0 0.052 1.182 20.107 0.000 0.000 18.314 LGA T 16 T 16 18.182 0 0.116 0.978 20.528 0.000 0.000 20.060 LGA G 17 G 17 15.967 0 0.560 0.560 16.960 0.000 0.000 - LGA Q 18 Q 18 15.574 0 0.626 0.994 17.723 0.000 0.000 17.723 LGA N 19 N 19 16.790 0 0.626 0.870 17.415 0.000 0.000 16.874 LGA W 20 W 20 13.641 0 0.638 1.215 18.739 0.000 0.000 17.834 LGA A 21 A 21 13.734 0 0.040 0.038 16.007 0.000 0.000 - LGA S 22 S 22 12.419 0 0.044 0.079 14.573 0.000 0.000 14.573 LGA L 23 L 23 8.660 0 0.032 0.327 12.401 0.000 0.000 12.038 LGA A 24 A 24 6.179 0 0.017 0.021 7.936 0.455 0.364 - LGA A 25 A 25 6.956 0 0.026 0.026 8.520 0.909 0.727 - LGA N 26 N 26 2.698 0 0.034 0.932 7.922 45.000 23.182 7.922 LGA E 27 E 27 0.891 0 0.062 0.917 3.966 46.364 37.172 3.966 LGA L 28 L 28 5.636 0 0.262 0.794 8.727 2.727 1.364 7.658 LGA R 29 R 29 5.710 0 0.510 1.694 15.267 3.182 1.157 15.267 LGA V 30 V 30 0.815 0 0.616 1.294 2.584 57.273 54.805 1.696 LGA T 31 T 31 2.129 0 0.715 0.825 5.427 39.545 24.156 4.471 LGA E 32 E 32 2.609 0 0.688 0.848 6.816 46.364 20.808 6.816 LGA R 33 R 33 2.383 0 0.061 1.492 14.070 28.636 10.413 14.070 LGA P 34 P 34 3.207 0 0.633 0.602 5.218 11.818 15.844 3.030 LGA F 35 F 35 3.332 0 0.613 1.225 12.611 19.545 7.107 12.611 LGA W 36 W 36 3.803 0 0.651 0.596 12.637 25.000 7.143 12.637 LGA I 37 I 37 4.079 0 0.097 0.776 6.393 14.091 8.409 3.774 LGA S 38 S 38 3.260 0 0.081 0.633 5.685 25.455 17.879 5.685 LGA S 39 S 39 2.109 0 0.158 0.554 4.701 38.182 32.121 4.701 LGA F 40 F 40 2.512 0 0.088 0.870 9.316 48.636 18.678 9.316 LGA I 41 I 41 2.884 0 0.603 0.971 7.435 22.727 11.591 6.404 LGA G 42 G 42 7.381 0 0.356 0.356 11.075 0.000 0.000 - LGA R 43 R 43 12.481 0 0.167 0.881 18.675 0.000 0.000 18.675 LGA S 44 S 44 18.242 0 0.615 0.916 21.728 0.000 0.000 19.785 LGA K 45 K 45 21.736 0 0.393 0.936 25.824 0.000 0.000 25.824 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 10.391 10.285 11.173 10.816 6.657 2.805 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 14 2.78 35.795 30.731 0.487 LGA_LOCAL RMSD: 2.777 Number of atoms: 14 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 17.028 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 10.391 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.203199 * X + 0.793216 * Y + -0.574037 * Z + 6.568291 Y_new = 0.377675 * X + -0.604396 * Y + -0.701475 * Z + 24.218981 Z_new = -0.903367 * X + -0.074261 * Y + -0.422390 * Z + 1.878931 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.077193 1.127556 -2.967560 [DEG: 61.7186 64.6042 -170.0287 ] ZXZ: -0.685818 2.006877 -1.652816 [DEG: -39.2945 114.9856 -94.6994 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: S0953s2TS122_2-D1 REMARK 2: S0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap S0953s2TS122_2-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 14 2.78 30.731 10.39 REMARK ---------------------------------------------------------- MOLECULE S0953s2TS122_2-D1 PFRMAT TS TARGET S0953s2 MODEL 2 PARENT N/A ATOM 1098 N ALA 2 -10.214 40.507 25.996 1.00 16.88 N ATOM 1100 CA ALA 2 -10.577 39.096 25.787 1.00 17.05 C ATOM 1101 CB ALA 2 -10.243 38.279 27.028 1.00 16.78 C ATOM 1102 C ALA 2 -12.077 38.999 25.462 1.00 17.44 C ATOM 1103 O ALA 2 -12.478 38.204 24.602 1.00 17.08 O ATOM 1104 N VAL 3 -12.880 39.815 26.162 1.00 18.29 N ATOM 1106 CA VAL 3 -14.345 39.904 25.989 1.00 18.90 C ATOM 1107 CB VAL 3 -15.154 39.286 27.211 1.00 19.12 C ATOM 1108 CG1 VAL 3 -15.157 37.769 27.111 1.00 19.12 C ATOM 1109 CG2 VAL 3 -14.562 39.712 28.573 1.00 19.65 C ATOM 1110 C VAL 3 -14.778 41.356 25.668 1.00 19.66 C ATOM 1111 O VAL 3 -15.134 41.648 24.520 1.00 20.11 O ATOM 1112 N GLN 4 -14.743 42.243 26.679 1.00 19.81 N ATOM 1114 CA GLN 4 -15.099 43.676 26.576 1.00 20.51 C ATOM 1115 CB GLN 4 -16.573 43.936 26.960 1.00 20.38 C ATOM 1116 CG GLN 4 -17.600 43.519 25.913 1.00 19.42 C ATOM 1117 CD GLN 4 -19.025 43.799 26.350 1.00 19.46 C ATOM 1118 OE1 GLN 4 -19.679 42.950 26.956 1.00 19.44 O ATOM 1119 NE2 GLN 4 -19.515 44.995 26.043 1.00 19.62 N ATOM 1122 C GLN 4 -14.177 44.470 27.515 1.00 20.77 C ATOM 1123 O GLN 4 -14.092 44.158 28.711 1.00 21.26 O ATOM 1124 N GLY 5 -13.486 45.475 26.970 1.00 20.53 N ATOM 1126 CA GLY 5 -12.576 46.295 27.762 1.00 20.81 C ATOM 1127 C GLY 5 -12.067 47.553 27.062 1.00 20.35 C ATOM 1128 O GLY 5 -12.901 48.426 26.793 1.00 20.42 O ATOM 1129 N PRO 6 -10.740 47.710 26.757 1.00 19.98 N ATOM 1130 CD PRO 6 -10.384 48.898 25.948 1.00 20.32 C ATOM 1131 CA PRO 6 -9.538 46.865 26.962 1.00 19.33 C ATOM 1132 CB PRO 6 -8.451 47.609 26.168 1.00 19.36 C ATOM 1133 CG PRO 6 -8.905 49.044 26.188 1.00 19.99 C ATOM 1134 C PRO 6 -9.111 46.563 28.424 1.00 18.77 C ATOM 1135 O PRO 6 -8.953 47.490 29.233 1.00 18.80 O ATOM 1136 N TRP 7 -8.966 45.267 28.742 1.00 18.36 N ATOM 1138 CA TRP 7 -8.573 44.786 30.080 1.00 17.88 C ATOM 1139 CB TRP 7 -9.815 44.233 30.843 1.00 17.54 C ATOM 1140 CG TRP 7 -10.499 42.952 30.288 1.00 17.13 C ATOM 1141 CD2 TRP 7 -10.404 41.613 30.821 1.00 16.86 C ATOM 1142 CE2 TRP 7 -11.231 40.781 30.014 1.00 16.68 C ATOM 1143 CE3 TRP 7 -9.702 41.033 31.903 1.00 16.89 C ATOM 1144 CD1 TRP 7 -11.354 42.867 29.212 1.00 17.09 C ATOM 1145 NE1 TRP 7 -11.792 41.575 29.049 1.00 16.80 N ATOM 1147 CZ2 TRP 7 -11.379 39.393 30.252 1.00 16.55 C ATOM 1148 CZ3 TRP 7 -9.849 39.643 32.144 1.00 16.77 C ATOM 1149 CH2 TRP 7 -10.686 38.845 31.314 1.00 16.61 C ATOM 1150 C TRP 7 -7.416 43.757 30.035 1.00 17.77 C ATOM 1151 O TRP 7 -7.371 42.819 30.848 1.00 17.90 O ATOM 1152 N VAL 8 -6.471 43.962 29.098 1.00 17.65 N ATOM 1154 CA VAL 8 -5.264 43.114 28.856 1.00 17.61 C ATOM 1155 CB VAL 8 -4.184 43.235 30.045 1.00 18.45 C ATOM 1156 CG1 VAL 8 -2.842 42.587 29.677 1.00 18.24 C ATOM 1157 CG2 VAL 8 -3.956 44.700 30.418 1.00 19.54 C ATOM 1158 C VAL 8 -5.644 41.641 28.518 1.00 16.49 C ATOM 1159 O VAL 8 -5.210 40.705 29.190 1.00 15.99 O ATOM 1160 N GLY 9 -6.477 41.474 27.483 1.00 16.17 N ATOM 1162 CA GLY 9 -6.955 40.166 27.029 1.00 15.19 C ATOM 1163 C GLY 9 -6.036 39.158 26.345 1.00 14.26 C ATOM 1164 O GLY 9 -6.102 37.967 26.667 1.00 13.50 O ATOM 1165 N SER 10 -5.242 39.614 25.369 1.00 14.34 N ATOM 1167 CA SER 10 -4.296 38.769 24.609 1.00 13.57 C ATOM 1168 CB SER 10 -3.865 39.481 23.330 1.00 13.83 C ATOM 1169 OG SER 10 -3.914 40.881 23.504 1.00 14.19 O ATOM 1171 C SER 10 -3.074 38.252 25.398 1.00 13.40 C ATOM 1172 O SER 10 -2.656 37.102 25.217 1.00 12.60 O ATOM 1173 N SER 11 -2.509 39.114 26.257 1.00 14.21 N ATOM 1175 CA SER 11 -1.363 38.793 27.139 1.00 14.34 C ATOM 1176 CB SER 11 -0.864 40.062 27.844 1.00 15.45 C ATOM 1177 OG SER 11 0.185 39.791 28.757 1.00 15.57 O ATOM 1179 C SER 11 -1.906 37.785 28.165 1.00 13.77 C ATOM 1180 O SER 11 -1.208 36.856 28.592 1.00 13.39 O ATOM 1181 N TYR 12 -3.180 38.009 28.511 1.00 13.76 N ATOM 1183 CA TYR 12 -3.991 37.226 29.451 1.00 13.26 C ATOM 1184 CB TYR 12 -5.298 38.011 29.716 1.00 13.66 C ATOM 1185 CG TYR 12 -6.061 37.698 31.015 1.00 13.62 C ATOM 1186 CD1 TYR 12 -7.069 36.701 31.050 1.00 13.59 C ATOM 1187 CE1 TYR 12 -7.800 36.431 32.240 1.00 13.56 C ATOM 1188 CD2 TYR 12 -5.804 38.420 32.207 1.00 13.73 C ATOM 1189 CE2 TYR 12 -6.531 38.156 33.401 1.00 13.73 C ATOM 1190 CZ TYR 12 -7.521 37.163 33.406 1.00 13.60 C ATOM 1191 OH TYR 12 -8.226 36.908 34.561 1.00 13.60 O ATOM 1193 C TYR 12 -4.310 35.812 28.910 1.00 12.18 C ATOM 1194 O TYR 12 -4.254 34.835 29.665 1.00 11.67 O ATOM 1195 N VAL 13 -4.608 35.725 27.602 1.00 11.89 N ATOM 1197 CA VAL 13 -4.948 34.467 26.904 1.00 10.92 C ATOM 1198 CB VAL 13 -5.621 34.754 25.482 1.00 10.89 C ATOM 1199 CG1 VAL 13 -4.596 34.977 24.360 1.00 11.03 C ATOM 1200 CG2 VAL 13 -6.619 33.650 25.118 1.00 10.75 C ATOM 1201 C VAL 13 -3.721 33.520 26.827 1.00 10.46 C ATOM 1202 O VAL 13 -3.866 32.299 26.963 1.00 9.69 O ATOM 1203 N ALA 14 -2.538 34.115 26.610 1.00 11.02 N ATOM 1205 CA ALA 14 -1.247 33.407 26.522 1.00 10.87 C ATOM 1206 CB ALA 14 -0.183 34.324 25.942 1.00 11.62 C ATOM 1207 C ALA 14 -0.774 32.831 27.868 1.00 10.94 C ATOM 1208 O ALA 14 -0.340 31.676 27.924 1.00 10.47 O ATOM 1209 N GLU 15 -0.865 33.645 28.933 1.00 11.61 N ATOM 1211 CA GLU 15 -0.459 33.274 30.307 1.00 11.84 C ATOM 1212 CB GLU 15 -0.359 34.520 31.200 1.00 12.80 C ATOM 1213 CG GLU 15 0.798 35.457 30.868 1.00 13.68 C ATOM 1214 CD GLU 15 0.855 36.665 31.785 1.00 14.62 C ATOM 1215 OE1 GLU 15 1.526 36.585 32.836 1.00 14.93 O ATOM 1216 OE2 GLU 15 0.231 37.696 31.453 1.00 15.13 O ATOM 1217 C GLU 15 -1.355 32.219 30.990 1.00 11.08 C ATOM 1218 O GLU 15 -0.838 31.253 31.557 1.00 10.97 O ATOM 1219 N THR 16 -2.682 32.416 30.920 1.00 10.65 N ATOM 1221 CA THR 16 -3.698 31.514 31.510 1.00 9.94 C ATOM 1222 CB THR 16 -5.095 32.220 31.606 1.00 9.91 C ATOM 1223 OG1 THR 16 -4.902 33.610 31.894 1.00 9.95 O ATOM 1225 CG2 THR 16 -5.953 31.620 32.734 1.00 10.18 C ATOM 1226 C THR 16 -3.816 30.162 30.766 1.00 9.06 C ATOM 1227 O THR 16 -3.998 29.116 31.400 1.00 8.71 O ATOM 1228 N GLY 17 -3.683 30.206 29.434 1.00 8.79 N ATOM 1230 CA GLY 17 -3.785 29.013 28.599 1.00 8.03 C ATOM 1231 C GLY 17 -2.468 28.353 28.217 1.00 7.60 C ATOM 1232 O GLY 17 -1.580 29.009 27.657 1.00 7.92 O ATOM 1233 N GLN 18 -2.360 27.055 28.528 1.00 7.17 N ATOM 1235 CA GLN 18 -1.179 26.222 28.243 1.00 7.01 C ATOM 1236 CB GLN 18 -0.600 25.613 29.548 1.00 7.75 C ATOM 1237 CG GLN 18 -1.601 24.958 30.528 1.00 7.99 C ATOM 1238 CD GLN 18 -0.925 24.399 31.764 1.00 8.84 C ATOM 1239 OE1 GLN 18 -0.547 23.229 31.803 1.00 9.13 O ATOM 1240 NE2 GLN 18 -0.770 25.236 32.786 1.00 9.40 N ATOM 1243 C GLN 18 -1.492 25.135 27.183 1.00 6.00 C ATOM 1244 O GLN 18 -0.637 24.291 26.872 1.00 5.83 O ATOM 1245 N ASN 19 -2.701 25.215 26.607 1.00 5.61 N ATOM 1247 CA ASN 19 -3.209 24.278 25.585 1.00 4.79 C ATOM 1248 CB ASN 19 -4.744 24.165 25.713 1.00 4.74 C ATOM 1249 CG ASN 19 -5.286 22.812 25.248 1.00 4.98 C ATOM 1250 OD1 ASN 19 -5.411 21.875 26.039 1.00 5.37 O ATOM 1251 ND2 ASN 19 -5.623 22.716 23.965 1.00 5.15 N ATOM 1254 C ASN 19 -2.802 24.711 24.154 1.00 4.90 C ATOM 1255 O ASN 19 -2.249 25.801 23.973 1.00 4.81 O ATOM 1256 N TRP 20 -3.090 23.849 23.164 1.00 5.29 N ATOM 1258 CA TRP 20 -2.782 24.057 21.733 1.00 5.70 C ATOM 1259 CB TRP 20 -3.011 22.738 20.956 1.00 6.49 C ATOM 1260 CG TRP 20 -2.217 22.553 19.629 1.00 7.09 C ATOM 1261 CD2 TRP 20 -0.925 21.929 19.458 1.00 7.93 C ATOM 1262 CE2 TRP 20 -0.630 21.957 18.065 1.00 8.55 C ATOM 1263 CE3 TRP 20 0.014 21.349 20.342 1.00 8.46 C ATOM 1264 CD1 TRP 20 -2.628 22.916 18.366 1.00 7.29 C ATOM 1265 NE1 TRP 20 -1.684 22.563 17.435 1.00 8.17 N ATOM 1267 CZ2 TRP 20 0.569 21.425 17.528 1.00 9.60 C ATOM 1268 CZ3 TRP 20 1.214 20.816 19.807 1.00 9.50 C ATOM 1269 CH2 TRP 20 1.473 20.862 18.409 1.00 10.02 C ATOM 1270 C TRP 20 -3.595 25.200 21.087 1.00 5.46 C ATOM 1271 O TRP 20 -3.064 25.934 20.245 1.00 5.60 O ATOM 1272 N ALA 21 -4.866 25.335 21.495 1.00 5.30 N ATOM 1274 CA ALA 21 -5.801 26.365 20.995 1.00 5.40 C ATOM 1275 CB ALA 21 -7.216 26.061 21.467 1.00 5.75 C ATOM 1276 C ALA 21 -5.398 27.791 21.410 1.00 4.93 C ATOM 1277 O ALA 21 -5.513 28.726 20.611 1.00 5.10 O ATOM 1278 N SER 22 -4.915 27.927 22.655 1.00 4.52 N ATOM 1280 CA SER 22 -4.460 29.204 23.241 1.00 4.38 C ATOM 1281 CB SER 22 -4.283 29.060 24.758 1.00 4.41 C ATOM 1282 OG SER 22 -3.435 27.970 25.078 1.00 4.83 O ATOM 1284 C SER 22 -3.167 29.738 22.594 1.00 4.38 C ATOM 1285 O SER 22 -3.104 30.918 22.228 1.00 4.44 O ATOM 1286 N LEU 23 -2.180 28.845 22.408 1.00 4.56 N ATOM 1288 CA LEU 23 -0.866 29.157 21.799 1.00 5.00 C ATOM 1289 CB LEU 23 0.123 27.986 21.991 1.00 5.54 C ATOM 1290 CG LEU 23 0.676 27.585 23.372 1.00 5.94 C ATOM 1291 CD1 LEU 23 0.869 26.077 23.404 1.00 6.36 C ATOM 1292 CD2 LEU 23 1.996 28.300 23.715 1.00 6.30 C ATOM 1293 C LEU 23 -0.980 29.505 20.305 1.00 5.18 C ATOM 1294 O LEU 23 -0.318 30.435 19.831 1.00 5.41 O ATOM 1295 N ALA 24 -1.844 28.763 19.593 1.00 5.27 N ATOM 1297 CA ALA 24 -2.117 28.941 18.155 1.00 5.72 C ATOM 1298 CB ALA 24 -2.928 27.763 17.625 1.00 6.17 C ATOM 1299 C ALA 24 -2.858 30.260 17.882 1.00 5.52 C ATOM 1300 O ALA 24 -2.585 30.932 16.880 1.00 5.81 O ATOM 1301 N ALA 25 -3.768 30.621 18.802 1.00 5.19 N ATOM 1303 CA ALA 25 -4.584 31.851 18.737 1.00 5.26 C ATOM 1304 CB ALA 25 -5.704 31.793 19.773 1.00 5.32 C ATOM 1305 C ALA 25 -3.764 33.141 18.910 1.00 5.10 C ATOM 1306 O ALA 25 -3.944 34.087 18.135 1.00 5.32 O ATOM 1307 N ASN 26 -2.876 33.168 19.917 1.00 4.91 N ATOM 1309 CA ASN 26 -1.999 34.324 20.200 1.00 5.09 C ATOM 1310 CB ASN 26 -1.412 34.278 21.635 1.00 5.25 C ATOM 1311 CG ASN 26 -0.701 32.958 21.978 1.00 4.98 C ATOM 1312 OD1 ASN 26 -1.084 32.272 22.924 1.00 5.22 O ATOM 1313 ND2 ASN 26 0.370 32.639 21.251 1.00 4.89 N ATOM 1316 C ASN 26 -0.891 34.558 19.152 1.00 5.40 C ATOM 1317 O ASN 26 -0.622 35.705 18.779 1.00 5.64 O ATOM 1318 N GLU 27 -0.266 33.461 18.696 1.00 5.57 N ATOM 1320 CA GLU 27 0.820 33.461 17.690 1.00 6.14 C ATOM 1321 CB GLU 27 1.532 32.102 17.663 1.00 6.54 C ATOM 1322 CG GLU 27 2.430 31.833 18.867 1.00 6.82 C ATOM 1323 CD GLU 27 3.115 30.480 18.796 1.00 7.36 C ATOM 1324 OE1 GLU 27 2.537 29.492 19.299 1.00 7.91 O ATOM 1325 OE2 GLU 27 4.231 30.404 18.240 1.00 7.42 O ATOM 1326 C GLU 27 0.403 33.858 16.261 1.00 6.27 C ATOM 1327 O GLU 27 1.166 34.537 15.566 1.00 6.66 O ATOM 1328 N LEU 28 -0.799 33.433 15.843 1.00 6.09 N ATOM 1330 CA LEU 28 -1.364 33.707 14.502 1.00 6.41 C ATOM 1331 CB LEU 28 -2.600 32.793 14.248 1.00 6.51 C ATOM 1332 CG LEU 28 -3.273 32.266 12.940 1.00 7.03 C ATOM 1333 CD1 LEU 28 -3.952 33.379 12.126 1.00 7.33 C ATOM 1334 CD2 LEU 28 -2.319 31.439 12.061 1.00 7.40 C ATOM 1335 C LEU 28 -1.721 35.194 14.261 1.00 6.38 C ATOM 1336 O LEU 28 -1.390 35.741 13.202 1.00 6.77 O ATOM 1337 N ARG 29 -2.386 35.820 15.241 1.00 6.04 N ATOM 1339 CA ARG 29 -2.805 37.236 15.176 1.00 6.19 C ATOM 1340 CB ARG 29 -4.343 37.379 15.287 1.00 6.80 C ATOM 1341 CG ARG 29 -5.050 36.591 16.417 1.00 7.25 C ATOM 1342 CD ARG 29 -6.561 36.814 16.421 1.00 8.14 C ATOM 1343 NE ARG 29 -6.935 38.174 16.824 1.00 9.01 N ATOM 1345 CZ ARG 29 -8.184 38.633 16.911 1.00 10.02 C ATOM 1346 NH1 ARG 29 -8.394 39.888 17.288 1.00 10.86 N ATOM 1349 NH2 ARG 29 -9.226 37.857 16.628 1.00 10.35 N ATOM 1352 C ARG 29 -2.089 38.147 16.192 1.00 6.18 C ATOM 1353 O ARG 29 -1.840 37.731 17.331 1.00 6.51 O ATOM 1354 N VAL 30 -1.767 39.376 15.759 1.00 6.06 N ATOM 1356 CA VAL 30 -1.088 40.398 16.580 1.00 6.18 C ATOM 1357 CB VAL 30 0.175 41.020 15.805 1.00 6.03 C ATOM 1358 CG1 VAL 30 -0.238 41.795 14.539 1.00 5.90 C ATOM 1359 CG2 VAL 30 1.055 41.867 16.739 1.00 6.60 C ATOM 1360 C VAL 30 -2.107 41.465 17.066 1.00 6.59 C ATOM 1361 O VAL 30 -2.140 41.794 18.258 1.00 6.98 O ATOM 1362 N THR 31 -2.917 41.981 16.128 1.00 6.80 N ATOM 1364 CA THR 31 -3.955 43.001 16.374 1.00 7.49 C ATOM 1365 CB THR 31 -3.587 44.364 15.678 1.00 8.37 C ATOM 1366 OG1 THR 31 -2.162 44.502 15.629 1.00 9.21 O ATOM 1368 CG2 THR 31 -4.160 45.554 16.461 1.00 8.92 C ATOM 1369 C THR 31 -5.292 42.452 15.818 1.00 7.61 C ATOM 1370 O THR 31 -5.303 41.397 15.174 1.00 7.66 O ATOM 1371 N GLU 32 -6.396 43.175 16.070 1.00 7.83 N ATOM 1373 CA GLU 32 -7.756 42.806 15.626 1.00 8.20 C ATOM 1374 CB GLU 32 -8.819 43.356 16.617 1.00 8.47 C ATOM 1375 CG GLU 32 -8.719 44.853 17.044 1.00 9.20 C ATOM 1376 CD GLU 32 -7.976 45.062 18.360 1.00 9.44 C ATOM 1377 OE1 GLU 32 -8.623 44.998 19.427 1.00 9.80 O ATOM 1378 OE2 GLU 32 -6.749 45.290 18.323 1.00 9.33 O ATOM 1379 C GLU 32 -8.098 43.184 14.161 1.00 8.48 C ATOM 1380 O GLU 32 -9.117 42.728 13.623 1.00 9.14 O ATOM 1381 N ARG 33 -7.217 43.972 13.529 1.00 8.14 N ATOM 1383 CA ARG 33 -7.379 44.435 12.135 1.00 8.41 C ATOM 1384 CB ARG 33 -6.934 45.900 11.994 1.00 8.72 C ATOM 1385 CG ARG 33 -7.887 46.908 12.644 1.00 9.07 C ATOM 1386 CD ARG 33 -7.475 48.357 12.395 1.00 9.61 C ATOM 1387 NE ARG 33 -7.640 48.763 10.997 1.00 9.35 N ATOM 1389 CZ ARG 33 -7.354 49.971 10.508 1.00 9.95 C ATOM 1390 NH1 ARG 33 -6.879 50.935 11.291 1.00 10.56 N ATOM 1393 NH2 ARG 33 -7.549 50.218 9.220 1.00 10.14 N ATOM 1396 C ARG 33 -6.636 43.560 11.095 1.00 8.70 C ATOM 1397 O ARG 33 -5.513 43.117 11.369 1.00 8.59 O ATOM 1398 N PRO 34 -7.256 43.282 9.901 1.00 9.31 N ATOM 1399 CD PRO 34 -8.664 43.558 9.528 1.00 10.37 C ATOM 1400 CA PRO 34 -6.630 42.459 8.842 1.00 9.28 C ATOM 1401 CB PRO 34 -7.745 42.330 7.802 1.00 10.37 C ATOM 1402 CG PRO 34 -8.984 42.402 8.618 1.00 10.77 C ATOM 1403 C PRO 34 -5.360 43.077 8.212 1.00 8.69 C ATOM 1404 O PRO 34 -4.468 42.345 7.773 1.00 8.60 O ATOM 1405 N PHE 35 -5.322 44.416 8.156 1.00 8.52 N ATOM 1407 CA PHE 35 -4.199 45.205 7.607 1.00 8.15 C ATOM 1408 CB PHE 35 -4.637 46.683 7.405 1.00 8.55 C ATOM 1409 CG PHE 35 -3.858 47.449 6.328 1.00 8.95 C ATOM 1410 CD1 PHE 35 -4.310 47.472 4.987 1.00 9.51 C ATOM 1411 CD2 PHE 35 -2.692 48.181 6.660 1.00 8.95 C ATOM 1412 CE1 PHE 35 -3.614 48.211 3.989 1.00 9.99 C ATOM 1413 CE2 PHE 35 -1.986 48.925 5.674 1.00 9.37 C ATOM 1414 CZ PHE 35 -2.449 48.939 4.335 1.00 9.86 C ATOM 1415 C PHE 35 -2.946 45.126 8.509 1.00 7.40 C ATOM 1416 O PHE 35 -1.825 44.994 8.001 1.00 7.21 O ATOM 1417 N TRP 36 -3.162 45.195 9.832 1.00 7.21 N ATOM 1419 CA TRP 36 -2.105 45.141 10.861 1.00 6.86 C ATOM 1420 CB TRP 36 -2.644 45.627 12.220 1.00 7.15 C ATOM 1421 CG TRP 36 -2.772 47.161 12.384 1.00 7.14 C ATOM 1422 CD2 TRP 36 -1.780 48.075 12.908 1.00 7.54 C ATOM 1423 CE2 TRP 36 -2.364 49.374 12.898 1.00 7.79 C ATOM 1424 CE3 TRP 36 -0.458 47.926 13.387 1.00 8.03 C ATOM 1425 CD1 TRP 36 -3.874 47.932 12.091 1.00 7.17 C ATOM 1426 NE1 TRP 36 -3.633 49.249 12.397 1.00 7.56 N ATOM 1428 CZ2 TRP 36 -1.672 50.524 13.349 1.00 8.48 C ATOM 1429 CZ3 TRP 36 0.237 49.075 13.838 1.00 8.70 C ATOM 1430 CH2 TRP 36 -0.379 50.358 13.812 1.00 8.91 C ATOM 1431 C TRP 36 -1.378 43.794 11.021 1.00 6.86 C ATOM 1432 O TRP 36 -0.163 43.777 11.256 1.00 6.81 O ATOM 1433 N ILE 37 -2.118 42.681 10.882 1.00 7.25 N ATOM 1435 CA ILE 37 -1.572 41.307 10.984 1.00 7.64 C ATOM 1436 CB ILE 37 -2.750 40.217 11.157 1.00 8.39 C ATOM 1437 CG2 ILE 37 -3.712 40.199 9.933 1.00 8.78 C ATOM 1438 CG1 ILE 37 -2.232 38.843 11.682 1.00 8.79 C ATOM 1439 CD1 ILE 37 -1.605 37.806 10.668 1.00 9.49 C ATOM 1440 C ILE 37 -0.638 41.049 9.769 1.00 7.57 C ATOM 1441 O ILE 37 0.450 40.480 9.928 1.00 7.78 O ATOM 1442 N SER 38 -1.078 41.516 8.591 1.00 7.53 N ATOM 1444 CA SER 38 -0.350 41.421 7.310 1.00 7.66 C ATOM 1445 CB SER 38 -1.256 41.837 6.144 1.00 8.06 C ATOM 1446 OG SER 38 -2.401 41.006 6.062 1.00 7.88 O ATOM 1448 C SER 38 0.897 42.321 7.356 1.00 7.28 C ATOM 1449 O SER 38 1.939 41.985 6.782 1.00 7.56 O ATOM 1450 N SER 39 0.752 43.460 8.051 1.00 6.90 N ATOM 1452 CA SER 39 1.795 44.487 8.257 1.00 6.86 C ATOM 1453 CB SER 39 1.165 45.734 8.901 1.00 6.79 C ATOM 1454 OG SER 39 2.071 46.826 8.934 1.00 7.27 O ATOM 1456 C SER 39 2.948 43.974 9.142 1.00 7.04 C ATOM 1457 O SER 39 4.120 44.250 8.855 1.00 7.44 O ATOM 1458 N PHE 40 2.595 43.232 10.204 1.00 7.04 N ATOM 1460 CA PHE 40 3.545 42.652 11.174 1.00 7.60 C ATOM 1461 CB PHE 40 2.783 42.172 12.441 1.00 7.69 C ATOM 1462 CG PHE 40 3.608 42.173 13.734 1.00 8.22 C ATOM 1463 CD1 PHE 40 3.634 43.310 14.577 1.00 8.71 C ATOM 1464 CD2 PHE 40 4.330 41.023 14.131 1.00 8.49 C ATOM 1465 CE1 PHE 40 4.366 43.304 15.796 1.00 9.39 C ATOM 1466 CE2 PHE 40 5.068 41.002 15.348 1.00 9.21 C ATOM 1467 CZ PHE 40 5.086 42.147 16.183 1.00 9.62 C ATOM 1468 C PHE 40 4.406 41.507 10.593 1.00 8.22 C ATOM 1469 O PHE 40 5.626 41.502 10.792 1.00 8.87 O ATOM 1470 N ILE 41 3.768 40.561 9.883 1.00 8.25 N ATOM 1472 CA ILE 41 4.452 39.403 9.261 1.00 9.02 C ATOM 1473 CB ILE 41 3.469 38.206 8.935 1.00 9.30 C ATOM 1474 CG2 ILE 41 3.033 37.533 10.248 1.00 9.91 C ATOM 1475 CG1 ILE 41 2.262 38.657 8.080 1.00 9.18 C ATOM 1476 CD1 ILE 41 1.723 37.601 7.104 1.00 9.61 C ATOM 1477 C ILE 41 5.366 39.726 8.057 1.00 9.18 C ATOM 1478 O ILE 41 6.498 39.236 7.991 1.00 9.96 O ATOM 1479 N GLY 42 4.863 40.554 7.133 1.00 8.60 N ATOM 1481 CA GLY 42 5.609 40.951 5.943 1.00 8.85 C ATOM 1482 C GLY 42 5.307 40.122 4.702 1.00 8.68 C ATOM 1483 O GLY 42 6.184 39.393 4.221 1.00 9.28 O ATOM 1484 N ARG 43 4.075 40.240 4.195 1.00 8.00 N ATOM 1486 CA ARG 43 3.604 39.514 3.002 1.00 7.81 C ATOM 1487 CB ARG 43 2.261 38.786 3.280 1.00 7.54 C ATOM 1488 CG ARG 43 1.138 39.618 3.949 1.00 7.77 C ATOM 1489 CD ARG 43 -0.150 38.816 4.128 1.00 7.79 C ATOM 1490 NE ARG 43 -0.828 38.533 2.860 1.00 8.02 N ATOM 1492 CZ ARG 43 -2.010 37.927 2.739 1.00 8.30 C ATOM 1493 NH1 ARG 43 -2.688 37.520 3.808 1.00 8.40 N ATOM 1496 NH2 ARG 43 -2.522 37.727 1.533 1.00 8.72 N ATOM 1499 C ARG 43 3.529 40.375 1.720 1.00 7.45 C ATOM 1500 O ARG 43 2.752 41.339 1.656 1.00 7.72 O ATOM 1501 N SER 44 4.377 40.039 0.735 1.00 7.09 N ATOM 1503 CA SER 44 4.450 40.726 -0.568 1.00 6.94 C ATOM 1504 CB SER 44 5.746 41.551 -0.690 1.00 7.28 C ATOM 1505 OG SER 44 5.747 42.390 -1.831 1.00 7.11 O ATOM 1507 C SER 44 4.388 39.691 -1.698 1.00 6.50 C ATOM 1508 O SER 44 3.668 39.897 -2.679 1.00 6.40 O ATOM 1509 N LYS 45 5.098 38.566 -1.526 1.00 6.60 N ATOM 1511 CA LYS 45 5.160 37.480 -2.526 1.00 6.61 C ATOM 1512 CB LYS 45 6.403 36.602 -2.314 1.00 7.49 C ATOM 1513 CG LYS 45 7.730 37.289 -2.620 1.00 8.40 C ATOM 1514 CD LYS 45 8.908 36.350 -2.384 1.00 9.38 C ATOM 1515 CE LYS 45 10.248 37.018 -2.684 1.00 10.38 C ATOM 1516 NZ LYS 45 10.460 37.305 -4.135 1.00 10.96 N ATOM 1520 C LYS 45 3.879 36.631 -2.653 1.00 6.21 C ATOM 1521 O LYS 45 2.920 37.107 -3.271 1.00 6.12 O TER END