####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name S0953s2TS089_4-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name S0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap S0953s2TS089_4-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 44 2 - 45 4.51 4.51 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 22 10 - 31 1.92 5.60 LCS_AVERAGE: 35.69 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 20 - 31 0.54 5.87 LCS_AVERAGE: 16.68 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 4 44 0 3 3 5 13 18 24 27 31 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT V 3 V 3 3 8 44 3 5 7 11 12 19 24 28 31 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT Q 4 Q 4 3 8 44 3 5 6 11 17 23 28 32 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT G 5 G 5 4 8 44 3 5 11 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT P 6 P 6 4 8 44 3 3 4 7 14 20 28 32 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT W 7 W 7 4 8 44 3 4 4 7 13 15 25 31 33 36 39 40 41 42 42 43 43 43 43 43 LCS_GDT V 8 V 8 4 10 44 3 4 6 7 18 24 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT G 9 G 9 9 11 44 8 11 13 15 17 22 28 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT S 10 S 10 9 22 44 8 9 12 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT S 11 S 11 9 22 44 8 9 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT Y 12 Y 12 9 22 44 8 9 13 16 21 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT V 13 V 13 9 22 44 8 9 10 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT A 14 A 14 9 22 44 8 9 10 11 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT E 15 E 15 9 22 44 8 9 10 14 20 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT T 16 T 16 9 22 44 8 9 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT G 17 G 17 9 22 44 4 9 10 17 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT Q 18 Q 18 3 22 44 3 3 3 10 16 23 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT N 19 N 19 3 22 44 3 3 6 7 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT W 20 W 20 12 22 44 10 12 13 15 20 23 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT A 21 A 21 12 22 44 10 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT S 22 S 22 12 22 44 10 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT L 23 L 23 12 22 44 10 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT A 24 A 24 12 22 44 10 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT A 25 A 25 12 22 44 10 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT N 26 N 26 12 22 44 10 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT E 27 E 27 12 22 44 10 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT L 28 L 28 12 22 44 10 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT R 29 R 29 12 22 44 10 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT V 30 V 30 12 22 44 6 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT T 31 T 31 12 22 44 7 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT E 32 E 32 3 14 44 3 3 3 5 8 14 24 26 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT R 33 R 33 3 14 44 2 3 3 11 16 22 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT P 34 P 34 3 7 44 1 3 3 5 7 13 16 22 26 29 34 38 41 42 42 43 43 43 43 43 LCS_GDT F 35 F 35 3 7 44 3 3 13 15 20 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT W 36 W 36 6 10 44 4 5 7 14 20 24 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT I 37 I 37 6 10 44 4 5 8 14 20 24 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT S 38 S 38 6 10 44 4 5 7 15 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT S 39 S 39 6 10 44 4 5 9 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT F 40 F 40 6 10 44 4 5 7 11 11 21 28 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT I 41 I 41 6 10 44 4 5 11 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT G 42 G 42 5 10 44 4 5 6 11 11 11 14 28 31 35 39 40 41 42 42 43 43 43 43 43 LCS_GDT R 43 R 43 5 10 44 4 5 7 11 11 11 14 17 21 28 33 40 41 42 42 43 43 43 43 43 LCS_GDT S 44 S 44 5 10 44 3 4 6 11 11 11 14 15 17 21 25 29 32 36 40 43 43 43 43 43 LCS_GDT K 45 K 45 4 10 44 0 0 4 11 11 11 12 14 15 18 19 23 24 28 31 34 38 41 41 43 LCS_AVERAGE LCS_A: 50.79 ( 16.68 35.69 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 GDT PERCENT_AT 22.73 27.27 29.55 40.91 50.00 56.82 65.91 75.00 79.55 86.36 88.64 90.91 93.18 95.45 95.45 97.73 97.73 97.73 97.73 97.73 GDT RMS_LOCAL 0.40 0.54 0.62 1.51 1.72 1.91 2.26 2.53 2.73 3.05 3.15 3.30 3.53 3.67 3.67 3.99 3.99 3.99 3.99 3.99 GDT RMS_ALL_AT 5.76 5.87 5.90 4.83 4.96 5.05 5.17 5.15 4.97 4.81 4.80 4.71 4.62 4.62 4.62 4.54 4.54 4.54 4.54 4.54 # Checking swapping # possible swapping detected: E 15 E 15 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 7.387 0 0.386 0.396 8.352 0.000 0.000 - LGA V 3 V 3 5.900 0 0.235 1.057 6.153 0.000 0.000 6.059 LGA Q 4 Q 4 4.831 0 0.043 0.220 8.629 11.818 5.253 7.088 LGA G 5 G 5 2.919 0 0.261 0.261 6.196 11.818 11.818 - LGA P 6 P 6 5.874 0 0.084 0.152 7.511 0.000 0.000 7.511 LGA W 7 W 7 6.758 0 0.195 1.259 12.535 0.455 0.130 12.389 LGA V 8 V 8 3.889 0 0.417 1.042 6.578 25.455 16.883 3.980 LGA G 9 G 9 4.216 0 0.555 0.555 4.216 15.000 15.000 - LGA S 10 S 10 2.020 0 0.111 0.102 2.539 53.182 48.485 1.868 LGA S 11 S 11 1.494 0 0.127 0.839 3.072 65.909 51.515 3.072 LGA Y 12 Y 12 2.280 0 0.069 0.824 10.359 48.182 17.576 10.359 LGA V 13 V 13 2.154 0 0.079 1.100 6.385 44.545 30.909 6.385 LGA A 14 A 14 2.855 0 0.075 0.089 3.868 29.091 26.909 - LGA E 15 E 15 3.009 0 0.054 1.196 4.786 25.455 17.172 3.980 LGA T 16 T 16 1.239 0 0.084 0.208 1.931 61.818 65.974 0.824 LGA G 17 G 17 1.805 0 0.635 0.635 2.986 48.636 48.636 - LGA Q 18 Q 18 3.465 0 0.611 0.467 7.947 18.636 8.283 7.947 LGA N 19 N 19 2.834 0 0.446 1.375 9.059 38.636 19.545 6.806 LGA W 20 W 20 3.133 0 0.494 1.144 10.735 40.000 11.429 10.735 LGA A 21 A 21 1.352 0 0.032 0.052 1.840 61.818 62.545 - LGA S 22 S 22 1.236 0 0.035 0.598 1.764 65.455 60.606 1.764 LGA L 23 L 23 1.659 0 0.073 1.406 6.249 58.182 34.773 4.221 LGA A 24 A 24 1.631 0 0.038 0.057 1.829 58.182 56.727 - LGA A 25 A 25 0.669 0 0.026 0.037 1.207 77.727 82.182 - LGA N 26 N 26 0.666 0 0.018 0.488 1.225 77.727 75.682 1.214 LGA E 27 E 27 1.128 0 0.153 1.444 6.513 62.727 37.374 6.513 LGA L 28 L 28 1.507 0 0.108 1.406 5.563 51.364 32.955 5.563 LGA R 29 R 29 1.401 0 0.030 1.914 11.473 65.455 27.769 11.473 LGA V 30 V 30 1.074 0 0.237 1.098 2.584 73.636 62.597 2.584 LGA T 31 T 31 1.458 0 0.704 0.778 5.436 45.000 29.870 3.299 LGA E 32 E 32 5.578 0 0.455 1.126 9.925 5.455 2.424 8.977 LGA R 33 R 33 3.949 0 0.159 0.989 8.007 4.091 6.281 5.703 LGA P 34 P 34 6.912 0 0.657 0.613 8.336 0.000 0.000 8.336 LGA F 35 F 35 3.040 0 0.619 1.163 9.961 19.545 8.099 9.961 LGA W 36 W 36 3.669 0 0.599 0.612 8.770 26.364 7.532 8.702 LGA I 37 I 37 3.643 0 0.089 0.881 7.012 30.000 15.227 7.012 LGA S 38 S 38 2.756 0 0.103 0.569 6.264 25.909 17.576 6.264 LGA S 39 S 39 2.648 0 0.211 0.738 4.946 28.182 25.152 3.989 LGA F 40 F 40 3.481 0 0.201 0.337 10.570 19.545 7.603 10.346 LGA I 41 I 41 2.245 0 0.070 0.588 5.856 26.364 17.955 5.476 LGA G 42 G 42 8.528 0 0.144 0.144 11.586 0.000 0.000 - LGA R 43 R 43 10.481 0 0.263 1.387 14.106 0.000 0.000 14.106 LGA S 44 S 44 13.605 0 0.486 0.841 16.357 0.000 0.000 15.116 LGA K 45 K 45 17.835 0 0.583 0.812 19.917 0.000 0.000 19.593 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 4.508 4.554 6.082 32.304 24.237 10.026 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 33 2.53 60.227 56.700 1.255 LGA_LOCAL RMSD: 2.530 Number of atoms: 33 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 5.154 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 4.508 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.328147 * X + 0.239173 * Y + -0.913847 * Z + 48.239895 Y_new = -0.003871 * X + 0.967748 * Y + 0.251890 * Z + 30.976238 Z_new = 0.944619 * X + -0.079119 * Y + 0.318489 * Z + -56.700672 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.011798 -1.236431 -0.243490 [DEG: -0.6759 -70.8423 -13.9510 ] ZXZ: -1.839754 1.246661 1.654359 [DEG: -105.4102 71.4284 94.7878 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: S0953s2TS089_4-D1 REMARK 2: S0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap S0953s2TS089_4-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 33 2.53 56.700 4.51 REMARK ---------------------------------------------------------- MOLECULE S0953s2TS089_4-D1 PFRMAT TS TARGET S0953s2 MODEL 4 PARENT N/A ATOM 9 N ALA 2 9.181 42.026 11.761 1.00 5.77 ATOM 10 CA ALA 2 9.047 42.933 10.615 1.00 5.77 ATOM 11 CB ALA 2 8.877 44.382 11.098 1.00 5.77 ATOM 12 C ALA 2 9.893 42.685 9.354 1.00 5.77 ATOM 13 O ALA 2 10.864 43.395 9.135 1.00 5.77 ATOM 14 N VAL 3 9.601 41.620 8.590 1.00 5.99 ATOM 15 CA VAL 3 10.503 41.027 7.558 1.00 5.99 ATOM 16 CB VAL 3 10.848 39.569 7.873 1.00 5.99 ATOM 17 CG1 VAL 3 11.535 39.413 9.232 1.00 5.99 ATOM 18 CG2 VAL 3 9.657 38.618 7.762 1.00 5.99 ATOM 19 C VAL 3 9.983 41.278 6.137 1.00 5.99 ATOM 20 O VAL 3 9.174 42.172 5.947 1.00 5.99 ATOM 21 N GLN 4 10.439 40.567 5.101 1.00 5.85 ATOM 22 CA GLN 4 9.964 40.758 3.714 1.00 5.85 ATOM 23 CB GLN 4 11.141 40.778 2.733 1.00 5.85 ATOM 24 CG GLN 4 12.205 41.838 3.067 1.00 5.85 ATOM 25 CD GLN 4 13.563 41.500 2.473 1.00 5.85 ATOM 26 OE1 GLN 4 13.961 40.344 2.438 1.00 5.85 ATOM 27 NE2 GLN 4 14.329 42.476 2.062 1.00 5.85 ATOM 28 C GLN 4 8.966 39.666 3.300 1.00 5.85 ATOM 29 O GLN 4 9.063 38.527 3.765 1.00 5.85 ATOM 30 N GLY 5 8.034 40.033 2.405 1.00 5.60 ATOM 31 CA GLY 5 6.954 39.185 1.875 1.00 5.60 ATOM 32 C GLY 5 5.554 39.602 2.368 1.00 5.60 ATOM 33 O GLY 5 5.259 39.365 3.535 1.00 5.60 ATOM 34 N PRO 6 4.686 40.235 1.550 1.00 5.33 ATOM 35 CD PRO 6 4.874 40.512 0.134 1.00 5.33 ATOM 36 CG PRO 6 3.542 41.074 -0.357 1.00 5.33 ATOM 37 CB PRO 6 2.982 41.772 0.883 1.00 5.33 ATOM 38 CA PRO 6 3.466 40.895 2.042 1.00 5.33 ATOM 39 C PRO 6 2.352 39.967 2.550 1.00 5.33 ATOM 40 O PRO 6 1.601 40.368 3.431 1.00 5.33 ATOM 41 N TRP 7 2.250 38.728 2.064 1.00 5.30 ATOM 42 CA TRP 7 1.458 37.692 2.735 1.00 5.30 ATOM 43 CB TRP 7 1.121 36.563 1.744 1.00 5.30 ATOM 44 CG TRP 7 0.464 35.347 2.334 1.00 5.30 ATOM 45 CD1 TRP 7 1.114 34.244 2.772 1.00 5.30 ATOM 46 NE1 TRP 7 0.212 33.335 3.289 1.00 5.30 ATOM 47 CE2 TRP 7 -1.079 33.809 3.210 1.00 5.30 ATOM 48 CZ2 TRP 7 -2.316 33.282 3.611 1.00 5.30 ATOM 49 CH2 TRP 7 -3.481 34.037 3.394 1.00 5.30 ATOM 50 CZ3 TRP 7 -3.393 35.305 2.790 1.00 5.30 ATOM 51 CE3 TRP 7 -2.144 35.827 2.400 1.00 5.30 ATOM 52 CD2 TRP 7 -0.954 35.092 2.595 1.00 5.30 ATOM 53 C TRP 7 2.260 37.184 3.934 1.00 5.30 ATOM 54 O TRP 7 3.128 36.328 3.769 1.00 5.30 ATOM 55 N VAL 8 1.960 37.731 5.119 1.00 5.28 ATOM 56 CA VAL 8 1.964 37.053 6.433 1.00 5.28 ATOM 57 CB VAL 8 0.496 36.770 6.851 1.00 5.28 ATOM 58 CG1 VAL 8 -0.346 36.088 5.765 1.00 5.28 ATOM 59 CG2 VAL 8 0.274 36.009 8.161 1.00 5.28 ATOM 60 C VAL 8 2.915 35.859 6.571 1.00 5.28 ATOM 61 O VAL 8 2.534 34.748 6.917 1.00 5.28 ATOM 62 N GLY 9 4.196 36.145 6.333 1.00 5.39 ATOM 63 CA GLY 9 5.372 35.359 6.702 1.00 5.39 ATOM 64 C GLY 9 5.144 33.879 6.652 1.00 5.39 ATOM 65 O GLY 9 5.108 33.291 7.713 1.00 5.39 ATOM 66 N SER 10 5.029 33.300 5.461 1.00 5.40 ATOM 67 CA SER 10 4.833 31.855 5.282 1.00 5.40 ATOM 68 CB SER 10 5.184 31.472 3.840 1.00 5.40 ATOM 69 OG SER 10 6.469 31.971 3.490 1.00 5.40 ATOM 70 C SER 10 5.637 30.984 6.256 1.00 5.40 ATOM 71 O SER 10 5.088 30.065 6.860 1.00 5.40 ATOM 72 N SER 11 6.909 31.337 6.493 1.00 5.80 ATOM 73 CA SER 11 7.660 30.796 7.624 1.00 5.80 ATOM 74 CB SER 11 9.132 31.143 7.594 1.00 5.80 ATOM 75 OG SER 11 9.586 31.754 6.389 1.00 5.80 ATOM 76 C SER 11 7.005 31.049 8.995 1.00 5.80 ATOM 77 O SER 11 6.551 30.087 9.588 1.00 5.80 ATOM 78 N TYR 12 6.864 32.294 9.465 1.00 5.65 ATOM 79 CA TYR 12 6.247 32.647 10.758 1.00 5.65 ATOM 80 CB TYR 12 6.108 34.168 10.822 1.00 5.65 ATOM 81 CG TYR 12 5.360 34.693 12.014 1.00 5.65 ATOM 82 CD1 TYR 12 5.604 34.156 13.291 1.00 5.65 ATOM 83 CE1 TYR 12 4.889 34.624 14.397 1.00 5.65 ATOM 84 CZ TYR 12 3.932 35.634 14.223 1.00 5.65 ATOM 85 OH TYR 12 3.164 36.039 15.244 1.00 5.65 ATOM 86 CE2 TYR 12 3.720 36.205 12.957 1.00 5.65 ATOM 87 CD2 TYR 12 4.411 35.717 11.843 1.00 5.65 ATOM 88 C TYR 12 4.905 31.925 11.036 1.00 5.65 ATOM 89 O TYR 12 4.662 31.422 12.138 1.00 5.65 ATOM 90 N VAL 13 4.039 31.807 10.026 1.00 5.41 ATOM 91 CA VAL 13 2.795 31.049 10.164 1.00 5.41 ATOM 92 CB VAL 13 1.761 31.399 9.095 1.00 5.41 ATOM 93 CG1 VAL 13 1.267 32.829 9.277 1.00 5.41 ATOM 94 CG2 VAL 13 2.214 31.220 7.647 1.00 5.41 ATOM 95 C VAL 13 2.991 29.536 10.186 1.00 5.41 ATOM 96 O VAL 13 2.257 28.867 10.903 1.00 5.41 ATOM 97 N ALA 14 3.962 28.965 9.467 1.00 5.14 ATOM 98 CA ALA 14 4.310 27.560 9.666 1.00 5.14 ATOM 99 CB ALA 14 5.347 27.131 8.620 1.00 5.14 ATOM 100 C ALA 14 4.764 27.284 11.115 1.00 5.14 ATOM 101 O ALA 14 4.184 26.433 11.796 1.00 5.14 ATOM 102 N GLU 15 5.762 28.052 11.560 1.00 5.91 ATOM 103 CA GLU 15 6.410 28.053 12.880 1.00 5.91 ATOM 104 CB GLU 15 7.245 29.327 13.011 1.00 5.91 ATOM 105 CG GLU 15 8.376 29.371 12.008 1.00 5.91 ATOM 106 CD GLU 15 9.074 30.721 12.038 1.00 5.91 ATOM 107 OE1 GLU 15 9.523 31.094 13.143 1.00 5.91 ATOM 108 OE2 GLU 15 9.205 31.388 10.983 1.00 5.91 ATOM 109 C GLU 15 5.404 28.074 14.030 1.00 5.91 ATOM 110 O GLU 15 5.524 27.286 14.967 1.00 5.91 ATOM 111 N THR 16 4.426 28.987 13.942 1.00 5.67 ATOM 112 CA THR 16 3.369 29.144 14.948 1.00 5.67 ATOM 113 CB THR 16 2.783 30.566 14.976 1.00 5.67 ATOM 114 CG2 THR 16 3.786 31.582 15.508 1.00 5.67 ATOM 115 OG1 THR 16 2.402 31.011 13.697 1.00 5.67 ATOM 116 C THR 16 2.240 28.118 14.799 1.00 5.67 ATOM 117 O THR 16 1.649 27.721 15.806 1.00 5.67 ATOM 118 N GLY 17 1.956 27.627 13.584 1.00 5.73 ATOM 119 CA GLY 17 0.994 26.550 13.346 1.00 5.73 ATOM 120 C GLY 17 0.001 26.783 12.198 1.00 5.73 ATOM 121 O GLY 17 -0.308 27.899 11.796 1.00 5.73 ATOM 122 N GLN 18 -0.568 25.682 11.694 1.00 5.44 ATOM 123 CA GLN 18 -1.160 25.602 10.345 1.00 5.44 ATOM 124 CB GLN 18 -1.058 24.162 9.796 1.00 5.44 ATOM 125 CG GLN 18 0.294 23.449 10.034 1.00 5.44 ATOM 126 CD GLN 18 1.526 24.352 9.914 1.00 5.44 ATOM 127 OE1 GLN 18 1.693 25.101 8.967 1.00 5.44 ATOM 128 NE2 GLN 18 2.381 24.350 10.916 1.00 5.44 ATOM 129 C GLN 18 -2.573 26.221 10.175 1.00 5.44 ATOM 130 O GLN 18 -3.222 26.001 9.157 1.00 5.44 ATOM 131 N ASN 19 -3.054 27.036 11.122 1.00 5.34 ATOM 132 CA ASN 19 -4.239 27.902 10.967 1.00 5.34 ATOM 133 CB ASN 19 -5.134 27.765 12.216 1.00 5.34 ATOM 134 CG ASN 19 -6.462 28.499 12.091 1.00 5.34 ATOM 135 OD1 ASN 19 -6.904 28.887 11.023 1.00 5.34 ATOM 136 ND2 ASN 19 -7.170 28.695 13.181 1.00 5.34 ATOM 137 C ASN 19 -3.772 29.350 10.674 1.00 5.34 ATOM 138 O ASN 19 -4.072 30.310 11.393 1.00 5.34 ATOM 139 N TRP 20 -2.913 29.427 9.652 1.00 5.44 ATOM 140 CA TRP 20 -1.807 30.373 9.487 1.00 5.44 ATOM 141 CB TRP 20 -1.389 30.347 8.000 1.00 5.44 ATOM 142 CG TRP 20 -0.589 29.163 7.523 1.00 5.44 ATOM 143 CD1 TRP 20 0.105 28.294 8.298 1.00 5.44 ATOM 144 NE1 TRP 20 0.737 27.356 7.508 1.00 5.44 ATOM 145 CE2 TRP 20 0.530 27.598 6.170 1.00 5.44 ATOM 146 CZ2 TRP 20 0.973 26.959 5.001 1.00 5.44 ATOM 147 CH2 TRP 20 0.599 27.486 3.753 1.00 5.44 ATOM 148 CZ3 TRP 20 -0.211 28.633 3.692 1.00 5.44 ATOM 149 CE3 TRP 20 -0.662 29.255 4.873 1.00 5.44 ATOM 150 CD2 TRP 20 -0.310 28.751 6.145 1.00 5.44 ATOM 151 C TRP 20 -2.007 31.788 10.040 1.00 5.44 ATOM 152 O TRP 20 -1.567 32.100 11.145 1.00 5.44 ATOM 153 N ALA 21 -2.621 32.663 9.248 1.00 4.94 ATOM 154 CA ALA 21 -2.513 34.099 9.460 1.00 4.94 ATOM 155 CB ALA 21 -2.992 34.765 8.167 1.00 4.94 ATOM 156 C ALA 21 -3.247 34.594 10.722 1.00 4.94 ATOM 157 O ALA 21 -2.762 35.485 11.424 1.00 4.94 ATOM 158 N SER 22 -4.407 33.998 11.017 1.00 4.90 ATOM 159 CA SER 22 -5.197 34.247 12.228 1.00 4.90 ATOM 160 CB SER 22 -6.542 33.516 12.127 1.00 4.90 ATOM 161 OG SER 22 -7.181 33.811 10.898 1.00 4.90 ATOM 162 C SER 22 -4.483 33.759 13.491 1.00 4.90 ATOM 163 O SER 22 -4.411 34.492 14.479 1.00 4.90 ATOM 164 N LEU 23 -3.908 32.547 13.456 1.00 5.38 ATOM 165 CA LEU 23 -3.148 32.005 14.585 1.00 5.38 ATOM 166 CB LEU 23 -2.776 30.543 14.289 1.00 5.38 ATOM 167 CG LEU 23 -2.126 29.794 15.470 1.00 5.38 ATOM 168 CD1 LEU 23 -3.110 29.575 16.624 1.00 5.38 ATOM 169 CD2 LEU 23 -1.662 28.421 14.990 1.00 5.38 ATOM 170 C LEU 23 -1.904 32.839 14.910 1.00 5.38 ATOM 171 O LEU 23 -1.697 33.168 16.075 1.00 5.38 ATOM 172 N ALA 24 -1.133 33.229 13.889 1.00 5.18 ATOM 173 CA ALA 24 -0.013 34.149 14.043 1.00 5.18 ATOM 174 CB ALA 24 0.671 34.293 12.685 1.00 5.18 ATOM 175 C ALA 24 -0.469 35.502 14.625 1.00 5.18 ATOM 176 O ALA 24 0.141 36.008 15.558 1.00 5.18 ATOM 177 N ALA 25 -1.574 36.082 14.137 1.00 5.14 ATOM 178 CA ALA 25 -2.070 37.362 14.654 1.00 5.14 ATOM 179 CB ALA 25 -3.290 37.781 13.818 1.00 5.14 ATOM 180 C ALA 25 -2.390 37.332 16.157 1.00 5.14 ATOM 181 O ALA 25 -2.010 38.239 16.913 1.00 5.14 ATOM 182 N ASN 26 -3.057 36.254 16.574 1.00 5.14 ATOM 183 CA ASN 26 -3.408 36.069 17.971 1.00 5.14 ATOM 184 CB ASN 26 -4.516 35.003 18.076 1.00 5.14 ATOM 185 CG ASN 26 -5.894 35.606 17.817 1.00 5.14 ATOM 186 OD1 ASN 26 -6.123 36.345 16.877 1.00 5.14 ATOM 187 ND2 ASN 26 -6.836 35.384 18.709 1.00 5.14 ATOM 188 C ASN 26 -2.179 35.791 18.856 1.00 5.14 ATOM 189 O ASN 26 -2.132 36.323 19.966 1.00 5.14 ATOM 190 N GLU 27 -1.201 35.015 18.370 1.00 5.40 ATOM 191 CA GLU 27 0.064 34.681 19.053 1.00 5.40 ATOM 192 CB GLU 27 0.819 33.602 18.248 1.00 5.40 ATOM 193 CG GLU 27 2.189 33.177 18.827 1.00 5.40 ATOM 194 CD GLU 27 3.381 34.073 18.433 1.00 5.40 ATOM 195 OE1 GLU 27 4.328 34.211 19.241 1.00 5.40 ATOM 196 OE2 GLU 27 3.416 34.568 17.286 1.00 5.40 ATOM 197 C GLU 27 0.957 35.901 19.283 1.00 5.40 ATOM 198 O GLU 27 1.322 36.161 20.429 1.00 5.40 ATOM 199 N LEU 28 1.204 36.714 18.245 1.00 4.93 ATOM 200 CA LEU 28 1.862 38.015 18.395 1.00 4.93 ATOM 201 CB LEU 28 2.087 38.693 17.031 1.00 4.93 ATOM 202 CG LEU 28 2.880 40.019 17.042 1.00 4.93 ATOM 203 CD1 LEU 28 4.212 39.953 17.794 1.00 4.93 ATOM 204 CD2 LEU 28 3.184 40.448 15.604 1.00 4.93 ATOM 205 C LEU 28 1.103 38.952 19.359 1.00 4.93 ATOM 206 O LEU 28 1.641 39.966 19.804 1.00 4.93 ATOM 207 N ARG 29 -0.168 38.638 19.656 1.00 5.26 ATOM 208 CA ARG 29 -1.158 39.567 20.193 1.00 5.26 ATOM 209 CB ARG 29 -1.071 39.576 21.734 1.00 5.26 ATOM 210 CG ARG 29 -2.146 40.376 22.499 1.00 5.26 ATOM 211 CD ARG 29 -3.546 40.417 21.863 1.00 5.26 ATOM 212 NE ARG 29 -4.016 39.088 21.440 1.00 5.26 ATOM 213 CZ ARG 29 -5.099 38.850 20.726 1.00 5.26 ATOM 214 NH1 ARG 29 -5.321 37.656 20.284 1.00 5.26 ATOM 215 NH2 ARG 29 -5.982 39.761 20.447 1.00 5.26 ATOM 216 C ARG 29 -1.123 40.926 19.488 1.00 5.26 ATOM 217 O ARG 29 -1.304 41.976 20.111 1.00 5.26 ATOM 218 N VAL 30 -1.039 40.895 18.150 1.00 5.92 ATOM 219 CA VAL 30 -1.772 41.932 17.411 1.00 5.92 ATOM 220 CB VAL 30 -1.339 42.089 15.944 1.00 5.92 ATOM 221 CG1 VAL 30 0.070 42.682 15.840 1.00 5.92 ATOM 222 CG2 VAL 30 -1.401 40.795 15.144 1.00 5.92 ATOM 223 C VAL 30 -3.279 41.663 17.602 1.00 5.92 ATOM 224 O VAL 30 -3.685 40.652 18.180 1.00 5.92 ATOM 225 N THR 31 -4.156 42.562 17.154 1.00 5.77 ATOM 226 CA THR 31 -5.588 42.225 17.047 1.00 5.77 ATOM 227 CB THR 31 -6.406 43.412 16.500 1.00 5.77 ATOM 228 CG2 THR 31 -7.823 43.487 17.066 1.00 5.77 ATOM 229 OG1 THR 31 -5.809 44.663 16.767 1.00 5.77 ATOM 230 C THR 31 -5.806 41.015 16.124 1.00 5.77 ATOM 231 O THR 31 -4.926 40.703 15.325 1.00 5.77 ATOM 232 N GLU 32 -7.005 40.424 16.176 1.00 6.08 ATOM 233 CA GLU 32 -7.631 39.354 15.363 1.00 6.08 ATOM 234 CB GLU 32 -9.035 39.068 15.963 1.00 6.08 ATOM 235 CG GLU 32 -9.096 38.229 17.248 1.00 6.08 ATOM 236 CD GLU 32 -8.356 38.809 18.458 1.00 6.08 ATOM 237 OE1 GLU 32 -7.869 38.006 19.285 1.00 6.08 ATOM 238 OE2 GLU 32 -8.218 40.049 18.586 1.00 6.08 ATOM 239 C GLU 32 -7.737 39.637 13.835 1.00 6.08 ATOM 240 O GLU 32 -8.790 39.487 13.209 1.00 6.08 ATOM 241 N ARG 33 -6.677 40.143 13.210 1.00 5.79 ATOM 242 CA ARG 33 -6.621 40.751 11.885 1.00 5.79 ATOM 243 CB ARG 33 -6.678 42.290 11.996 1.00 5.79 ATOM 244 CG ARG 33 -7.821 42.859 12.865 1.00 5.79 ATOM 245 CD ARG 33 -9.241 42.577 12.352 1.00 5.79 ATOM 246 NE ARG 33 -10.259 42.948 13.364 1.00 5.79 ATOM 247 CZ ARG 33 -11.098 42.147 14.008 1.00 5.79 ATOM 248 NH1 ARG 33 -11.978 42.659 14.823 1.00 5.79 ATOM 249 NH2 ARG 33 -11.112 40.851 13.887 1.00 5.79 ATOM 250 C ARG 33 -5.331 40.248 11.194 1.00 5.79 ATOM 251 O ARG 33 -4.229 40.791 11.385 1.00 5.79 ATOM 252 N PRO 34 -5.443 39.210 10.345 1.00 5.54 ATOM 253 CD PRO 34 -6.637 38.435 10.020 1.00 5.54 ATOM 254 CG PRO 34 -6.317 37.713 8.716 1.00 5.54 ATOM 255 CB PRO 34 -4.810 37.513 8.806 1.00 5.54 ATOM 256 CA PRO 34 -4.295 38.726 9.581 1.00 5.54 ATOM 257 C PRO 34 -3.693 39.810 8.671 1.00 5.54 ATOM 258 O PRO 34 -2.544 39.683 8.261 1.00 5.54 ATOM 259 N PHE 35 -4.413 40.913 8.412 1.00 5.79 ATOM 260 CA PHE 35 -3.867 42.137 7.814 1.00 5.79 ATOM 261 CB PHE 35 -5.012 43.145 7.624 1.00 5.79 ATOM 262 CG PHE 35 -4.725 44.227 6.599 1.00 5.79 ATOM 263 CD1 PHE 35 -5.162 44.068 5.269 1.00 5.79 ATOM 264 CE1 PHE 35 -4.912 45.071 4.317 1.00 5.79 ATOM 265 CZ PHE 35 -4.218 46.237 4.687 1.00 5.79 ATOM 266 CE2 PHE 35 -3.775 46.396 6.012 1.00 5.79 ATOM 267 CD2 PHE 35 -4.031 45.396 6.966 1.00 5.79 ATOM 268 C PHE 35 -2.699 42.761 8.617 1.00 5.79 ATOM 269 O PHE 35 -1.712 43.223 8.041 1.00 5.79 ATOM 270 N TRP 36 -2.755 42.728 9.955 1.00 5.34 ATOM 271 CA TRP 36 -1.672 43.203 10.823 1.00 5.34 ATOM 272 CB TRP 36 -2.132 43.246 12.285 1.00 5.34 ATOM 273 CG TRP 36 -3.260 44.161 12.667 1.00 5.34 ATOM 274 CD1 TRP 36 -3.993 44.003 13.791 1.00 5.34 ATOM 275 NE1 TRP 36 -4.889 45.041 13.927 1.00 5.34 ATOM 276 CE2 TRP 36 -4.831 45.899 12.852 1.00 5.34 ATOM 277 CZ2 TRP 36 -5.550 47.058 12.525 1.00 5.34 ATOM 278 CH2 TRP 36 -5.244 47.737 11.336 1.00 5.34 ATOM 279 CZ3 TRP 36 -4.221 47.257 10.500 1.00 5.34 ATOM 280 CE3 TRP 36 -3.500 46.097 10.841 1.00 5.34 ATOM 281 CD2 TRP 36 -3.786 45.374 12.024 1.00 5.34 ATOM 282 C TRP 36 -0.428 42.326 10.689 1.00 5.34 ATOM 283 O TRP 36 0.672 42.858 10.488 1.00 5.34 ATOM 284 N ILE 37 -0.585 40.992 10.708 1.00 5.33 ATOM 285 CA ILE 37 0.620 40.155 10.467 1.00 5.33 ATOM 286 CB ILE 37 0.433 38.671 10.803 1.00 5.33 ATOM 287 CG2 ILE 37 1.739 37.902 10.538 1.00 5.33 ATOM 288 CG1 ILE 37 0.037 38.466 12.270 1.00 5.33 ATOM 289 CD1 ILE 37 0.970 39.121 13.297 1.00 5.33 ATOM 290 C ILE 37 1.168 40.332 9.037 1.00 5.33 ATOM 291 O ILE 37 2.377 40.422 8.850 1.00 5.33 ATOM 292 N SER 38 0.293 40.482 8.041 1.00 4.91 ATOM 293 CA SER 38 0.631 40.844 6.653 1.00 4.91 ATOM 294 CB SER 38 -0.625 40.765 5.772 1.00 4.91 ATOM 295 OG SER 38 -1.263 39.509 5.875 1.00 4.91 ATOM 296 C SER 38 1.208 42.266 6.487 1.00 4.91 ATOM 297 O SER 38 1.576 42.691 5.386 1.00 4.91 ATOM 298 N SER 39 1.251 43.055 7.561 1.00 5.34 ATOM 299 CA SER 39 1.976 44.323 7.621 1.00 5.34 ATOM 300 CB SER 39 1.196 45.344 8.458 1.00 5.34 ATOM 301 OG SER 39 -0.108 45.537 7.943 1.00 5.34 ATOM 302 C SER 39 3.386 44.118 8.197 1.00 5.34 ATOM 303 O SER 39 4.387 44.546 7.607 1.00 5.34 ATOM 304 N PHE 40 3.480 43.440 9.347 1.00 5.61 ATOM 305 CA PHE 40 4.780 43.200 9.984 1.00 5.61 ATOM 306 CB PHE 40 4.587 42.681 11.421 1.00 5.61 ATOM 307 CG PHE 40 4.306 43.773 12.455 1.00 5.61 ATOM 308 CD1 PHE 40 3.200 44.639 12.326 1.00 5.61 ATOM 309 CE1 PHE 40 2.958 45.642 13.286 1.00 5.61 ATOM 310 CZ PHE 40 3.798 45.766 14.408 1.00 5.61 ATOM 311 CE2 PHE 40 4.891 44.897 14.555 1.00 5.61 ATOM 312 CD2 PHE 40 5.147 43.919 13.578 1.00 5.61 ATOM 313 C PHE 40 5.694 42.323 9.093 1.00 5.61 ATOM 314 O PHE 40 6.706 42.792 8.548 1.00 5.61 ATOM 315 N ILE 41 5.268 41.102 8.784 1.00 5.60 ATOM 316 CA ILE 41 5.828 40.436 7.615 1.00 5.60 ATOM 317 CB ILE 41 5.356 38.984 7.435 1.00 5.60 ATOM 318 CG2 ILE 41 6.366 38.323 6.456 1.00 5.60 ATOM 319 CG1 ILE 41 5.119 38.207 8.761 1.00 5.60 ATOM 320 CD1 ILE 41 6.373 37.829 9.546 1.00 5.60 ATOM 321 C ILE 41 5.438 41.253 6.378 1.00 5.60 ATOM 322 O ILE 41 4.321 41.746 6.247 1.00 5.60 ATOM 323 N GLY 42 6.398 41.448 5.496 1.00 5.97 ATOM 324 CA GLY 42 6.318 42.346 4.367 1.00 5.97 ATOM 325 C GLY 42 6.937 43.712 4.629 1.00 5.97 ATOM 326 O GLY 42 7.441 44.269 3.654 1.00 5.97 ATOM 327 N ARG 43 6.962 44.253 5.869 1.00 5.95 ATOM 328 CA ARG 43 7.732 45.490 6.133 1.00 5.95 ATOM 329 CB ARG 43 6.864 46.607 6.769 1.00 5.95 ATOM 330 CG ARG 43 5.550 47.093 6.096 1.00 5.95 ATOM 331 CD ARG 43 5.317 46.858 4.590 1.00 5.95 ATOM 332 NE ARG 43 3.890 46.596 4.261 1.00 5.95 ATOM 333 CZ ARG 43 3.261 45.432 4.350 1.00 5.95 ATOM 334 NH1 ARG 43 2.033 45.270 3.958 1.00 5.95 ATOM 335 NH2 ARG 43 3.801 44.385 4.881 1.00 5.95 ATOM 336 C ARG 43 9.008 45.215 6.936 1.00 5.95 ATOM 337 O ARG 43 8.950 45.201 8.154 1.00 5.95 ATOM 338 N SER 44 10.142 45.071 6.240 1.00 5.91 ATOM 339 CA SER 44 11.546 44.917 6.705 1.00 5.91 ATOM 340 CB SER 44 12.405 44.759 5.444 1.00 5.91 ATOM 341 OG SER 44 12.290 45.882 4.595 1.00 5.91 ATOM 342 C SER 44 12.088 46.086 7.586 1.00 5.91 ATOM 343 O SER 44 13.180 46.585 7.324 1.00 5.91 ATOM 344 N LYS 45 11.304 46.607 8.546 1.00 5.46 ATOM 345 CA LYS 45 11.381 47.987 9.101 1.00 5.46 ATOM 346 CB LYS 45 10.502 48.128 10.356 1.00 5.46 ATOM 347 CG LYS 45 8.990 47.939 10.209 1.00 5.46 ATOM 348 CD LYS 45 8.370 47.910 11.614 1.00 5.46 ATOM 349 CE LYS 45 6.937 47.375 11.577 1.00 5.46 ATOM 350 NZ LYS 45 6.476 47.038 12.943 1.00 5.46 ATOM 351 C LYS 45 12.763 48.542 9.474 1.00 5.46 ATOM 352 O LYS 45 13.169 49.593 8.985 1.00 5.46 TER END