####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 98 ( 392), selected 98 , name R0993s2TS433_3 # Molecule2: number of CA atoms 98 ( 750), selected 98 , name R0993s2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap R0993s2TS433_3.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 98 12 - 109 3.06 3.06 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 83 24 - 106 1.99 3.20 LCS_AVERAGE: 77.82 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 34 48 - 81 0.98 3.50 LONGEST_CONTINUOUS_SEGMENT: 34 49 - 82 1.00 3.58 LCS_AVERAGE: 19.73 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 98 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT F 12 F 12 4 10 98 3 4 4 7 10 10 11 11 11 11 11 11 16 17 89 95 97 98 98 98 LCS_GDT Q 13 Q 13 4 10 98 3 4 4 7 10 10 11 26 42 74 77 94 95 96 97 97 97 98 98 98 LCS_GDT S 14 S 14 9 10 98 5 6 9 9 10 10 13 53 87 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT E 15 E 15 9 10 98 5 7 9 9 10 10 37 74 89 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT S 16 S 16 9 10 98 5 7 9 9 10 25 67 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT L 17 L 17 9 10 98 5 7 9 9 10 18 63 82 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT S 18 S 18 9 10 98 5 7 14 22 27 45 66 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT W 19 W 19 9 63 98 5 7 14 22 27 45 75 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT M 20 M 20 9 71 98 5 7 14 22 27 49 72 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT Q 21 Q 21 9 81 98 5 7 9 15 26 33 67 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT T 22 T 22 9 81 98 5 7 9 9 27 33 66 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT G 23 G 23 12 82 98 3 19 26 41 58 70 80 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT D 24 D 24 12 83 98 13 37 46 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT T 25 T 25 12 83 98 13 37 46 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT L 26 L 26 12 83 98 13 37 46 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT A 27 A 27 12 83 98 13 37 46 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT L 28 L 28 12 83 98 17 37 46 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT S 29 S 29 12 83 98 17 37 46 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT G 30 G 30 12 83 98 17 37 46 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT E 31 E 31 12 83 98 10 37 46 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT L 32 L 32 12 83 98 10 37 46 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT D 33 D 33 12 83 98 10 37 46 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT Q 34 Q 34 12 83 98 6 24 45 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT D 35 D 35 12 83 98 3 5 17 39 59 76 81 85 90 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT V 36 V 36 11 83 98 3 13 31 55 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT L 37 L 37 11 83 98 4 17 31 55 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT L 38 L 38 11 83 98 7 17 33 55 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT P 39 P 39 11 83 98 7 8 31 59 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT L 40 L 40 9 83 98 7 8 25 53 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT W 41 W 41 9 83 98 7 17 33 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT E 42 E 42 9 83 98 7 13 30 49 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT M 43 M 43 9 83 98 7 11 16 36 60 76 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT R 44 R 44 9 83 98 7 10 27 43 68 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT E 45 E 45 8 83 98 8 31 46 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT E 46 E 46 8 83 98 12 37 46 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT A 47 A 47 8 83 98 6 8 36 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT V 48 V 48 34 83 98 6 8 32 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT K 49 K 49 34 83 98 3 10 40 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT G 50 G 50 34 83 98 3 21 46 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT I 51 I 51 34 83 98 3 14 46 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT T 52 T 52 34 83 98 7 36 46 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT C 53 C 53 34 83 98 11 37 46 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT I 54 I 54 34 83 98 11 37 46 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT D 55 D 55 34 83 98 13 37 46 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT L 56 L 56 34 83 98 13 37 46 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT S 57 S 57 34 83 98 13 37 46 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT R 58 R 58 34 83 98 4 19 46 56 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT V 59 V 59 34 83 98 14 37 46 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT S 60 S 60 34 83 98 17 37 46 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT R 61 R 61 34 83 98 17 37 46 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT V 62 V 62 34 83 98 17 37 46 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT D 63 D 63 34 83 98 17 37 46 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT T 64 T 64 34 83 98 7 37 46 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT G 65 G 65 34 83 98 13 37 46 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT G 66 G 66 34 83 98 17 37 46 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT L 67 L 67 34 83 98 12 37 46 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT A 68 A 68 34 83 98 17 37 46 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT L 69 L 69 34 83 98 17 37 46 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT L 70 L 70 34 83 98 17 37 46 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT L 71 L 71 34 83 98 17 37 46 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT H 72 H 72 34 83 98 17 37 46 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT L 73 L 73 34 83 98 17 37 46 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT I 74 I 74 34 83 98 11 34 46 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT D 75 D 75 34 83 98 12 37 46 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT L 76 L 76 34 83 98 17 37 46 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT A 77 A 77 34 83 98 17 37 46 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT K 78 K 78 34 83 98 17 37 46 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT K 79 K 79 34 83 98 10 37 46 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT Q 80 Q 80 34 83 98 17 37 46 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT G 81 G 81 34 83 98 4 34 46 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT N 82 N 82 34 83 98 5 15 25 54 65 75 82 88 91 92 94 95 96 96 97 97 97 98 98 98 LCS_GDT N 83 N 83 33 83 98 5 15 38 60 69 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT V 84 V 84 14 83 98 5 16 38 60 69 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT T 85 T 85 14 83 98 5 16 41 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT L 86 L 86 14 83 98 7 27 46 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT Q 87 Q 87 14 83 98 16 37 46 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT G 88 G 88 15 83 98 5 33 46 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT V 89 V 89 15 83 98 5 17 46 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT N 90 N 90 15 83 98 6 16 46 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT D 91 D 91 15 83 98 6 16 46 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT K 92 K 92 15 83 98 6 18 46 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT V 93 V 93 15 83 98 6 16 46 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT Y 94 Y 94 15 83 98 6 16 44 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT T 95 T 95 15 83 98 5 19 46 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT L 96 L 96 15 83 98 4 15 41 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT A 97 A 97 15 83 98 6 16 46 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT K 98 K 98 15 83 98 6 15 44 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT L 99 L 99 15 83 98 6 15 46 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT Y 100 Y 100 15 83 98 6 14 36 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT N 101 N 101 15 83 98 6 13 20 54 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT L 102 L 102 15 83 98 6 13 20 41 67 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT P 103 P 103 5 83 98 4 5 5 7 10 18 56 74 82 92 93 95 96 96 97 97 97 98 98 98 LCS_GDT A 104 A 104 5 83 98 4 10 23 40 65 76 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT D 105 D 105 5 83 98 4 5 16 37 62 74 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT V 106 V 106 5 83 98 4 5 15 27 55 75 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT L 107 L 107 5 66 98 4 5 9 17 42 67 80 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT P 108 P 108 4 66 98 4 11 14 28 67 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT R 109 R 109 4 5 98 4 4 4 5 6 10 11 58 79 92 93 95 96 96 97 97 97 98 98 98 LCS_AVERAGE LCS_A: 65.85 ( 19.73 77.82 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 17 37 46 60 70 77 82 88 91 93 94 95 96 96 97 97 97 98 98 98 GDT PERCENT_AT 17.35 37.76 46.94 61.22 71.43 78.57 83.67 89.80 92.86 94.90 95.92 96.94 97.96 97.96 98.98 98.98 98.98 100.00 100.00 100.00 GDT RMS_LOCAL 0.33 0.67 0.83 1.29 1.51 1.70 1.87 2.27 2.38 2.51 2.53 2.60 2.67 2.67 2.80 2.80 2.80 3.06 3.06 3.06 GDT RMS_ALL_AT 3.62 3.53 3.55 3.33 3.23 3.21 3.22 3.14 3.13 3.10 3.10 3.10 3.09 3.09 3.07 3.07 3.07 3.06 3.06 3.06 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA F 12 F 12 13.481 7 0.378 0.378 16.035 0.000 0.000 - LGA Q 13 Q 13 9.341 5 0.212 0.212 10.259 0.000 0.000 - LGA S 14 S 14 6.418 2 0.697 0.697 7.818 0.000 0.000 - LGA E 15 E 15 5.918 5 0.063 0.063 6.115 0.000 0.000 - LGA S 16 S 16 4.842 2 0.092 0.092 5.032 0.455 0.303 - LGA L 17 L 17 5.289 4 0.045 0.045 5.636 0.000 0.000 - LGA S 18 S 18 5.126 2 0.194 0.194 5.246 0.000 0.000 - LGA W 19 W 19 4.639 10 0.074 0.074 5.285 1.364 0.390 - LGA M 20 M 20 4.671 4 0.068 0.068 4.671 3.636 1.818 - LGA Q 21 Q 21 4.620 5 0.216 0.216 4.620 3.636 1.616 - LGA T 22 T 22 4.781 3 0.631 0.631 4.781 4.091 2.338 - LGA G 23 G 23 3.647 0 0.588 0.588 4.815 12.273 12.273 - LGA D 24 D 24 1.622 4 0.169 0.169 1.688 54.545 27.273 - LGA T 25 T 25 1.311 3 0.081 0.081 1.969 54.545 31.169 - LGA L 26 L 26 1.227 4 0.085 0.085 1.436 65.455 32.727 - LGA A 27 A 27 1.325 1 0.092 0.092 1.698 61.818 49.455 - LGA L 28 L 28 1.426 4 0.367 0.367 3.549 45.000 22.500 - LGA S 29 S 29 1.763 2 0.133 0.133 1.770 50.909 33.939 - LGA G 30 G 30 2.192 0 0.254 0.254 2.505 35.455 35.455 - LGA E 31 E 31 1.794 5 0.055 0.055 1.820 54.545 24.242 - LGA L 32 L 32 1.717 4 0.127 0.127 2.072 47.727 23.864 - LGA D 33 D 33 1.776 4 0.321 0.321 3.730 37.727 18.864 - LGA Q 34 Q 34 1.575 5 0.204 0.204 2.955 39.091 17.374 - LGA D 35 D 35 3.940 4 0.089 0.089 4.297 11.364 5.682 - LGA V 36 V 36 2.732 3 0.241 0.241 3.084 25.000 14.286 - LGA L 37 L 37 2.631 4 0.036 0.036 2.717 27.273 13.636 - LGA L 38 L 38 2.493 4 0.133 0.133 2.704 35.455 17.727 - LGA P 39 P 39 2.102 3 0.033 0.033 2.305 38.182 21.818 - LGA L 40 L 40 2.324 4 0.050 0.050 2.324 38.182 19.091 - LGA W 41 W 41 1.995 10 0.119 0.119 3.033 39.545 11.299 - LGA E 42 E 42 2.401 5 0.118 0.118 3.376 30.455 13.535 - LGA M 43 M 43 3.046 4 0.335 0.335 3.046 30.455 15.227 - LGA R 44 R 44 2.716 7 0.115 0.115 3.017 40.455 14.711 - LGA E 45 E 45 1.441 5 0.059 0.059 1.852 61.818 27.475 - LGA E 46 E 46 1.111 5 0.055 0.055 1.330 69.545 30.909 - LGA A 47 A 47 1.700 1 0.018 0.018 2.820 49.545 39.636 - LGA V 48 V 48 1.940 3 0.057 0.057 2.854 41.818 23.896 - LGA K 49 K 49 2.083 5 0.038 0.038 2.515 38.636 17.172 - LGA G 50 G 50 1.805 0 0.243 0.243 1.943 50.909 50.909 - LGA I 51 I 51 1.782 4 0.144 0.144 2.071 47.727 23.864 - LGA T 52 T 52 2.151 3 0.222 0.222 3.236 36.364 20.779 - LGA C 53 C 53 1.575 2 0.094 0.094 1.708 54.545 36.364 - LGA I 54 I 54 1.275 4 0.150 0.150 1.466 65.455 32.727 - LGA D 55 D 55 0.861 4 0.087 0.087 0.935 81.818 40.909 - LGA L 56 L 56 1.011 4 0.078 0.078 1.050 69.545 34.773 - LGA S 57 S 57 0.805 2 0.060 0.060 1.827 65.909 43.939 - LGA R 58 R 58 2.481 7 0.100 0.100 2.619 38.636 14.050 - LGA V 59 V 59 1.397 3 0.130 0.130 2.701 48.636 27.792 - LGA S 60 S 60 2.034 2 0.085 0.085 2.449 41.364 27.576 - LGA R 61 R 61 1.547 7 0.022 0.022 1.578 58.182 21.157 - LGA V 62 V 62 1.346 3 0.134 0.134 1.472 65.455 37.403 - LGA D 63 D 63 1.412 4 0.082 0.082 1.461 65.455 32.727 - LGA T 64 T 64 1.553 3 0.093 0.093 1.553 61.818 35.325 - LGA G 65 G 65 0.971 0 0.066 0.066 1.201 69.545 69.545 - LGA G 66 G 66 1.500 0 0.029 0.029 1.587 58.182 58.182 - LGA L 67 L 67 1.874 4 0.024 0.024 1.874 50.909 25.455 - LGA A 68 A 68 1.373 1 0.033 0.033 1.504 61.818 49.455 - LGA L 69 L 69 1.182 4 0.047 0.047 1.247 65.455 32.727 - LGA L 70 L 70 1.222 4 0.061 0.061 1.369 65.455 32.727 - LGA L 71 L 71 1.403 4 0.009 0.009 1.434 65.455 32.727 - LGA H 72 H 72 1.163 6 0.027 0.027 1.285 65.455 26.182 - LGA L 73 L 73 1.114 4 0.087 0.087 1.217 65.455 32.727 - LGA I 74 I 74 1.762 4 0.021 0.021 1.856 50.909 25.455 - LGA D 75 D 75 1.807 4 0.084 0.084 2.004 47.727 23.864 - LGA L 76 L 76 1.398 4 0.064 0.064 1.509 61.818 30.909 - LGA A 77 A 77 1.464 1 0.016 0.016 1.665 58.182 46.545 - LGA K 78 K 78 1.714 5 0.062 0.062 1.761 50.909 22.626 - LGA K 79 K 79 1.896 5 0.199 0.199 1.896 54.545 24.242 - LGA Q 80 Q 80 1.605 5 0.108 0.108 1.856 54.545 24.242 - LGA G 81 G 81 1.731 0 0.484 0.484 2.217 44.545 44.545 - LGA N 82 N 82 4.060 4 0.141 0.141 4.060 20.000 10.000 - LGA N 83 N 83 3.266 4 0.205 0.205 3.721 18.636 9.318 - LGA V 84 V 84 3.084 3 0.141 0.141 3.390 18.182 10.390 - LGA T 85 T 85 2.560 3 0.065 0.065 2.721 32.727 18.701 - LGA L 86 L 86 1.866 4 0.090 0.090 2.141 47.727 23.864 - LGA Q 87 Q 87 1.126 5 0.089 0.089 1.224 73.636 32.727 - LGA G 88 G 88 0.919 0 0.077 0.077 1.040 77.727 77.727 - LGA V 89 V 89 1.147 3 0.075 0.075 1.359 69.545 39.740 - LGA N 90 N 90 1.498 4 0.070 0.070 1.635 58.182 29.091 - LGA D 91 D 91 1.499 4 0.064 0.064 1.555 61.818 30.909 - LGA K 92 K 92 1.196 5 0.214 0.214 1.353 69.545 30.909 - LGA V 93 V 93 1.453 3 0.046 0.046 1.575 58.182 33.247 - LGA Y 94 Y 94 1.891 8 0.079 0.079 1.891 50.909 16.970 - LGA T 95 T 95 1.113 3 0.060 0.060 1.318 65.455 37.403 - LGA L 96 L 96 1.843 4 0.184 0.184 1.843 54.545 27.273 - LGA A 97 A 97 1.531 1 0.040 0.040 1.554 58.182 46.545 - LGA K 98 K 98 2.066 5 0.063 0.063 2.246 41.364 18.384 - LGA L 99 L 99 1.980 4 0.074 0.074 2.070 47.727 23.864 - LGA Y 100 Y 100 2.051 8 0.262 0.262 2.051 51.364 17.121 - LGA N 101 N 101 2.478 4 0.151 0.151 2.996 32.727 16.364 - LGA L 102 L 102 2.965 4 0.638 0.638 4.175 20.455 10.227 - LGA P 103 P 103 6.130 3 0.625 0.625 6.130 9.545 5.455 - LGA A 104 A 104 2.956 1 0.047 0.047 3.802 25.909 20.727 - LGA D 105 D 105 3.500 4 0.104 0.104 3.739 33.182 16.591 - LGA V 106 V 106 3.596 3 0.614 0.614 3.749 14.545 8.312 - LGA L 107 L 107 4.362 4 0.051 0.051 6.156 4.091 2.045 - LGA P 108 P 108 3.415 3 0.068 0.068 5.125 10.455 5.974 - LGA R 109 R 109 6.964 8 0.506 0.506 6.964 0.000 0.000 - # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 98 392 392 100.00 750 392 52.27 98 0 SUMMARY(RMSD_GDC): 3.060 3.049 3.049 42.032 23.715 0.000 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 98 98 4.0 88 2.27 71.939 77.194 3.714 LGA_LOCAL RMSD: 2.269 Number of atoms: 88 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 3.136 Number of assigned atoms: 98 Std_ASGN_ATOMS RMSD: 3.060 Standard rmsd on all 98 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.895048 * X + -0.268632 * Y + -0.355986 * Z + -41.911049 Y_new = -0.396369 * X + -0.113315 * Y + -0.911072 * Z + 36.494522 Z_new = 0.204404 * X + 0.956554 * Y + -0.207900 * Z + -12.899183 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.416889 -0.205855 1.784811 [DEG: -23.8860 -11.7946 102.2621 ] ZXZ: -0.372492 1.780224 0.210522 [DEG: -21.3422 101.9993 12.0620 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: R0993s2TS433_3 REMARK 2: R0993s2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap R0993s2TS433_3.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 98 98 4.0 88 2.27 77.194 3.06 REMARK ---------------------------------------------------------- MOLECULE R0993s2TS433_3 PFRMAT TS TARGET R0993s2 MODEL 3 PARENT N/A ATOM 11 N PHE 12 -41.911 36.495 -12.899 1.00 0.00 ATOM 11 CA PHE 12 -40.976 37.110 -11.989 1.00 0.00 ATOM 12 C PHE 12 -39.467 37.032 -12.265 1.00 0.00 ATOM 12 O PHE 12 -39.041 36.298 -13.156 1.00 0.00 ATOM 13 N GLN 13 -38.632 37.715 -11.577 1.00 0.00 ATOM 13 CA GLN 13 -37.484 38.513 -12.009 1.00 0.00 ATOM 13 C GLN 13 -36.485 37.623 -12.729 1.00 0.00 ATOM 13 O GLN 13 -35.893 38.039 -13.723 1.00 0.00 ATOM 14 N SER 14 -36.310 36.470 -12.266 1.00 0.00 ATOM 14 CA SER 14 -35.081 35.862 -11.734 1.00 0.00 ATOM 14 C SER 14 -33.918 35.473 -12.675 1.00 0.00 ATOM 14 O SER 14 -32.811 35.204 -12.210 1.00 0.00 ATOM 14 N GLU 15 -34.184 35.452 -13.981 1.00 0.00 ATOM 14 CA GLU 15 -33.277 35.103 -14.972 1.00 0.00 ATOM 14 C GLU 15 -33.181 36.038 -16.044 1.00 0.00 ATOM 15 O GLU 15 -34.200 36.494 -16.558 1.00 0.00 ATOM 15 N SER 16 -31.981 36.357 -16.432 1.00 0.00 ATOM 15 CA SER 16 -31.590 37.203 -17.478 1.00 0.00 ATOM 15 C SER 16 -30.647 36.595 -18.608 1.00 0.00 ATOM 16 O SER 16 -29.639 35.965 -18.297 1.00 0.00 ATOM 16 N LEU 17 -31.094 36.869 -19.802 1.00 0.00 ATOM 16 CA LEU 17 -30.423 36.120 -20.942 1.00 0.00 ATOM 16 C LEU 17 -29.537 37.195 -21.735 1.00 0.00 ATOM 16 O LEU 17 -30.058 38.213 -22.184 1.00 0.00 ATOM 17 N SER 18 -28.288 36.987 -21.902 1.00 0.00 ATOM 17 CA SER 18 -27.347 37.853 -22.481 1.00 0.00 ATOM 17 C SER 18 -26.987 37.093 -23.705 1.00 0.00 ATOM 17 O SER 18 -26.322 36.063 -23.618 1.00 0.00 ATOM 18 N TRP 19 -27.376 37.539 -24.816 1.00 0.00 ATOM 18 CA TRP 19 -27.273 36.743 -26.062 1.00 0.00 ATOM 18 C TRP 19 -26.335 37.340 -27.099 1.00 0.00 ATOM 18 O TRP 19 -26.559 38.455 -27.563 1.00 0.00 ATOM 19 N MET 20 -25.276 36.471 -27.407 1.00 0.00 ATOM 19 CA MET 20 -24.432 36.947 -28.451 1.00 0.00 ATOM 19 C MET 20 -24.532 36.019 -29.781 1.00 0.00 ATOM 19 O MET 20 -24.704 34.808 -29.676 1.00 0.00 ATOM 20 N GLN 21 -24.414 36.620 -30.924 1.00 0.00 ATOM 20 CA GLN 21 -24.172 35.967 -32.121 1.00 0.00 ATOM 20 C GLN 21 -22.649 36.184 -32.318 1.00 0.00 ATOM 20 O GLN 21 -22.038 36.963 -31.590 1.00 0.00 ATOM 21 N THR 22 -22.154 35.401 -33.390 1.00 0.00 ATOM 21 CA THR 22 -20.729 35.329 -33.912 1.00 0.00 ATOM 21 C THR 22 -19.737 34.486 -33.176 1.00 0.00 ATOM 21 O THR 22 -18.995 33.728 -33.794 1.00 0.00 ATOM 22 N GLY 23 -19.741 34.625 -31.836 1.00 0.00 ATOM 22 CA GLY 23 -19.471 33.375 -31.030 1.00 0.00 ATOM 22 C GLY 23 -20.711 32.422 -30.857 1.00 0.00 ATOM 22 O GLY 23 -20.606 31.389 -30.199 1.00 0.00 ATOM 22 N ASP 24 -21.810 32.761 -31.428 1.00 0.00 ATOM 22 CA ASP 24 -23.036 31.876 -31.353 1.00 0.00 ATOM 22 C ASP 24 -23.518 31.460 -29.914 1.00 0.00 ATOM 23 O ASP 24 -23.770 30.283 -29.664 1.00 0.00 ATOM 23 N THR 25 -23.659 32.361 -28.983 1.00 0.00 ATOM 23 CA THR 25 -23.275 31.903 -27.663 1.00 0.00 ATOM 23 C THR 25 -24.113 32.663 -26.496 1.00 0.00 ATOM 23 O THR 25 -24.128 33.891 -26.447 1.00 0.00 ATOM 24 N LEU 26 -24.705 31.857 -25.688 1.00 0.00 ATOM 24 CA LEU 26 -25.880 32.306 -25.116 1.00 0.00 ATOM 24 C LEU 26 -25.629 32.299 -23.713 1.00 0.00 ATOM 24 O LEU 26 -25.243 31.271 -23.161 1.00 0.00 ATOM 25 N ALA 27 -25.802 33.346 -23.011 1.00 0.00 ATOM 25 CA ALA 27 -25.533 33.282 -21.525 1.00 0.00 ATOM 25 C ALA 27 -26.635 33.721 -20.561 1.00 0.00 ATOM 25 O ALA 27 -27.140 34.835 -20.669 1.00 0.00 ATOM 25 N LEU 28 -26.926 32.718 -19.617 1.00 0.00 ATOM 26 CA LEU 28 -28.173 32.373 -19.012 1.00 0.00 ATOM 26 C LEU 28 -28.269 32.597 -17.428 1.00 0.00 ATOM 26 O LEU 28 -28.323 31.630 -16.671 1.00 0.00 ATOM 26 N SER 29 -28.297 33.935 -16.964 1.00 0.00 ATOM 26 CA SER 29 -27.645 34.492 -15.827 1.00 0.00 ATOM 27 C SER 29 -28.894 34.728 -14.849 1.00 0.00 ATOM 27 O SER 29 -29.739 35.575 -15.123 1.00 0.00 ATOM 27 N GLY 30 -28.843 33.963 -13.850 1.00 0.00 ATOM 27 CA GLY 30 -29.251 34.228 -12.453 1.00 0.00 ATOM 27 C GLY 30 -29.802 32.971 -11.731 1.00 0.00 ATOM 27 O GLY 30 -29.032 32.086 -11.362 1.00 0.00 ATOM 28 N GLU 31 -31.096 33.025 -11.612 1.00 0.00 ATOM 28 CA GLU 31 -31.839 31.791 -11.442 1.00 0.00 ATOM 28 C GLU 31 -32.310 31.050 -12.698 1.00 0.00 ATOM 28 O GLU 31 -32.806 31.674 -13.632 1.00 0.00 ATOM 29 N LEU 32 -32.218 29.778 -12.839 1.00 0.00 ATOM 29 CA LEU 32 -33.213 28.924 -13.624 1.00 0.00 ATOM 29 C LEU 32 -34.033 27.893 -12.716 1.00 0.00 ATOM 29 O LEU 32 -33.487 26.876 -12.289 1.00 0.00 ATOM 29 N ASP 33 -35.361 28.296 -12.510 1.00 0.00 ATOM 30 CA ASP 33 -36.305 27.802 -11.569 1.00 0.00 ATOM 30 C ASP 33 -37.454 27.255 -12.522 1.00 0.00 ATOM 30 O ASP 33 -37.296 26.201 -13.134 1.00 0.00 ATOM 30 N GLN 34 -38.552 28.052 -12.576 1.00 0.00 ATOM 30 CA GLN 34 -39.930 27.736 -12.950 1.00 0.00 ATOM 31 C GLN 34 -40.631 28.583 -14.113 1.00 0.00 ATOM 31 O GLN 34 -40.692 28.128 -15.253 1.00 0.00 ATOM 31 N ASP 35 -41.109 29.804 -13.689 1.00 0.00 ATOM 31 CA ASP 35 -41.689 30.780 -14.509 1.00 0.00 ATOM 32 C ASP 35 -40.555 31.167 -15.502 1.00 0.00 ATOM 32 O ASP 35 -40.812 31.348 -16.690 1.00 0.00 ATOM 32 N VAL 36 -39.309 31.259 -14.878 1.00 0.00 ATOM 32 CA VAL 36 -38.083 31.357 -15.574 1.00 0.00 ATOM 32 C VAL 36 -37.861 30.273 -16.539 1.00 0.00 ATOM 33 O VAL 36 -37.396 30.521 -17.649 1.00 0.00 ATOM 33 N LEU 37 -38.193 29.009 -16.165 1.00 0.00 ATOM 33 CA LEU 37 -37.976 28.064 -17.179 1.00 0.00 ATOM 33 C LEU 37 -38.907 28.136 -18.398 1.00 0.00 ATOM 33 O LEU 37 -38.495 27.808 -19.509 1.00 0.00 ATOM 34 N LEU 38 -40.144 28.541 -18.325 1.00 0.00 ATOM 34 CA LEU 38 -41.125 28.800 -19.392 1.00 0.00 ATOM 34 C LEU 38 -40.447 29.893 -20.338 1.00 0.00 ATOM 34 O LEU 38 -40.383 29.703 -21.551 1.00 0.00 ATOM 35 N PRO 39 -39.970 30.989 -19.700 1.00 0.00 ATOM 35 CA PRO 39 -39.314 32.054 -20.584 1.00 0.00 ATOM 35 C PRO 39 -38.042 31.599 -21.219 1.00 0.00 ATOM 35 O PRO 39 -37.756 31.966 -22.357 1.00 0.00 ATOM 36 N LEU 40 -37.222 30.760 -20.487 1.00 0.00 ATOM 36 CA LEU 40 -35.968 30.299 -21.101 1.00 0.00 ATOM 36 C LEU 40 -36.222 29.523 -22.270 1.00 0.00 ATOM 36 O LEU 40 -35.535 29.681 -23.276 1.00 0.00 ATOM 36 N TRP 41 -37.228 28.640 -22.204 1.00 0.00 ATOM 37 CA TRP 41 -37.636 27.816 -23.238 1.00 0.00 ATOM 37 C TRP 41 -38.095 28.503 -24.445 1.00 0.00 ATOM 37 O TRP 41 -37.692 28.144 -25.550 1.00 0.00 ATOM 38 N GLU 42 -38.959 29.530 -24.251 1.00 0.00 ATOM 38 CA GLU 42 -39.468 30.293 -25.365 1.00 0.00 ATOM 38 C GLU 42 -38.291 30.994 -26.109 1.00 0.00 ATOM 38 O GLU 42 -38.243 30.981 -27.337 1.00 0.00 ATOM 39 N MET 43 -37.356 31.591 -25.272 1.00 0.00 ATOM 39 CA MET 43 -36.175 32.283 -25.825 1.00 0.00 ATOM 39 C MET 43 -35.303 31.239 -26.483 1.00 0.00 ATOM 39 O MET 43 -34.759 31.478 -27.558 1.00 0.00 ATOM 40 N ARG 44 -35.118 30.066 -25.928 1.00 0.00 ATOM 40 CA ARG 44 -34.286 29.065 -26.664 1.00 0.00 ATOM 40 C ARG 44 -34.842 28.599 -27.897 1.00 0.00 ATOM 40 O ARG 44 -34.120 28.437 -28.878 1.00 0.00 ATOM 41 N GLU 45 -36.204 28.391 -27.792 1.00 0.00 ATOM 41 CA GLU 45 -36.884 27.922 -29.082 1.00 0.00 ATOM 41 C GLU 45 -36.691 29.001 -30.115 1.00 0.00 ATOM 41 O GLU 45 -36.329 28.709 -31.252 1.00 0.00 ATOM 42 N GLU 46 -36.896 30.245 -29.818 1.00 0.00 ATOM 42 CA GLU 46 -36.643 31.209 -30.835 1.00 0.00 ATOM 42 C GLU 46 -35.262 31.298 -31.263 1.00 0.00 ATOM 42 O GLU 46 -34.990 31.365 -32.459 1.00 0.00 ATOM 43 N ALA 47 -34.349 31.291 -30.187 1.00 0.00 ATOM 43 CA ALA 47 -32.912 31.505 -30.487 1.00 0.00 ATOM 43 C ALA 47 -32.225 30.368 -31.261 1.00 0.00 ATOM 43 O ALA 47 -31.413 30.629 -32.147 1.00 0.00 ATOM 44 N VAL 48 -32.573 29.131 -30.912 1.00 0.00 ATOM 44 CA VAL 48 -31.951 27.896 -31.497 1.00 0.00 ATOM 44 C VAL 48 -32.580 27.552 -32.948 1.00 0.00 ATOM 44 O VAL 48 -32.331 26.477 -33.489 1.00 0.00 ATOM 44 N LYS 49 -33.290 28.492 -33.374 1.00 0.00 ATOM 45 CA LYS 49 -33.012 28.941 -34.743 1.00 0.00 ATOM 45 C LYS 49 -31.478 29.332 -35.042 1.00 0.00 ATOM 45 O LYS 49 -30.949 28.985 -36.095 1.00 0.00 ATOM 45 N GLY 50 -30.853 30.020 -34.106 1.00 0.00 ATOM 46 CA GLY 50 -29.553 30.460 -34.408 1.00 0.00 ATOM 46 C GLY 50 -28.352 29.762 -33.806 1.00 0.00 ATOM 46 O GLY 50 -27.350 29.560 -34.488 1.00 0.00 ATOM 46 N ILE 51 -28.359 29.366 -32.588 1.00 0.00 ATOM 46 CA ILE 51 -27.225 29.511 -31.667 1.00 0.00 ATOM 46 C ILE 51 -27.008 28.188 -30.835 1.00 0.00 ATOM 46 O ILE 51 -27.928 27.381 -30.711 1.00 0.00 ATOM 47 N THR 52 -25.754 28.095 -30.319 1.00 0.00 ATOM 47 CA THR 52 -25.309 26.746 -29.772 1.00 0.00 ATOM 47 C THR 52 -24.766 26.645 -28.272 1.00 0.00 ATOM 47 O THR 52 -24.920 25.609 -27.628 1.00 0.00 ATOM 48 N CYS 53 -24.190 27.641 -27.759 1.00 0.00 ATOM 48 CA CYS 53 -23.661 27.414 -26.442 1.00 0.00 ATOM 48 C CYS 53 -24.296 28.093 -25.230 1.00 0.00 ATOM 48 O CYS 53 -24.590 29.285 -25.275 1.00 0.00 ATOM 48 N ILE 54 -24.549 27.464 -24.108 1.00 0.00 ATOM 48 CA ILE 54 -24.994 28.080 -22.913 1.00 0.00 ATOM 49 C ILE 54 -23.936 28.299 -21.819 1.00 0.00 ATOM 49 O ILE 54 -23.436 27.335 -21.243 1.00 0.00 ATOM 49 N ASP 55 -23.659 29.508 -21.584 1.00 0.00 ATOM 49 CA ASP 55 -22.772 29.811 -20.517 1.00 0.00 ATOM 49 C ASP 55 -23.801 29.989 -19.315 1.00 0.00 ATOM 50 O ASP 55 -24.784 30.716 -19.449 1.00 0.00 ATOM 50 N LEU 56 -23.494 29.306 -18.205 1.00 0.00 ATOM 50 CA LEU 56 -24.245 29.393 -17.039 1.00 0.00 ATOM 50 C LEU 56 -23.515 30.270 -16.117 1.00 0.00 ATOM 50 O LEU 56 -23.791 30.274 -14.920 1.00 0.00 ATOM 51 N SER 57 -22.513 31.093 -16.661 1.00 0.00 ATOM 51 CA SER 57 -21.237 31.290 -15.992 1.00 0.00 ATOM 51 C SER 57 -21.228 32.031 -14.662 1.00 0.00 ATOM 51 O SER 57 -20.448 31.694 -13.775 1.00 0.00 ATOM 52 N ARG 58 -22.099 32.967 -14.649 1.00 0.00 ATOM 52 CA ARG 58 -22.682 33.580 -13.531 1.00 0.00 ATOM 52 C ARG 58 -23.920 32.972 -12.870 1.00 0.00 ATOM 52 O ARG 58 -24.336 33.426 -11.807 1.00 0.00 ATOM 53 N VAL 59 -24.522 31.926 -13.495 1.00 0.00 ATOM 53 CA VAL 59 -25.914 31.618 -12.960 1.00 0.00 ATOM 53 C VAL 59 -25.684 30.799 -11.765 1.00 0.00 ATOM 53 O VAL 59 -25.250 29.654 -11.877 1.00 0.00 ATOM 54 N SER 60 -26.015 31.467 -10.611 1.00 0.00 ATOM 54 CA SER 60 -25.896 30.778 -9.332 1.00 0.00 ATOM 54 C SER 60 -26.714 29.564 -9.090 1.00 0.00 ATOM 54 O SER 60 -26.213 28.584 -8.543 1.00 0.00 ATOM 54 N ARG 61 -27.956 29.683 -9.521 1.00 0.00 ATOM 55 CA ARG 61 -28.951 28.777 -8.885 1.00 0.00 ATOM 55 C ARG 61 -29.741 28.067 -9.972 1.00 0.00 ATOM 55 O ARG 61 -30.058 28.669 -10.995 1.00 0.00 ATOM 56 N VAL 62 -30.080 26.732 -9.736 1.00 0.00 ATOM 56 CA VAL 62 -30.810 25.929 -10.591 1.00 0.00 ATOM 56 C VAL 62 -31.703 25.076 -9.557 1.00 0.00 ATOM 56 O VAL 62 -31.206 24.657 -8.513 1.00 0.00 ATOM 56 N ASP 63 -32.901 24.920 -9.973 1.00 0.00 ATOM 57 CA ASP 63 -33.943 24.052 -9.303 1.00 0.00 ATOM 57 C ASP 63 -34.182 22.940 -10.206 1.00 0.00 ATOM 57 O ASP 63 -33.569 22.866 -11.269 1.00 0.00 ATOM 57 N THR 64 -35.118 21.968 -9.852 1.00 0.00 ATOM 57 CA THR 64 -35.530 20.873 -10.597 1.00 0.00 ATOM 58 C THR 64 -36.212 21.265 -11.885 1.00 0.00 ATOM 58 O THR 64 -35.973 20.648 -12.921 1.00 0.00 ATOM 58 N GLY 65 -37.067 22.293 -11.873 1.00 0.00 ATOM 58 CA GLY 65 -37.734 22.767 -13.108 1.00 0.00 ATOM 58 C GLY 65 -36.608 23.181 -13.996 1.00 0.00 ATOM 58 O GLY 65 -36.652 22.943 -15.200 1.00 0.00 ATOM 59 N GLY 66 -35.561 23.821 -13.345 1.00 0.00 ATOM 59 CA GLY 66 -34.495 24.340 -14.174 1.00 0.00 ATOM 59 C GLY 66 -33.728 23.338 -14.950 1.00 0.00 ATOM 59 O GLY 66 -33.461 23.545 -16.132 1.00 0.00 ATOM 59 N LEU 67 -33.410 22.281 -14.238 1.00 0.00 ATOM 59 CA LEU 67 -32.607 21.185 -14.868 1.00 0.00 ATOM 59 C LEU 67 -33.401 20.557 -16.056 1.00 0.00 ATOM 59 O LEU 67 -32.816 20.244 -17.091 1.00 0.00 ATOM 60 N ALA 68 -34.742 20.439 -15.759 1.00 0.00 ATOM 60 CA ALA 68 -35.586 19.880 -16.742 1.00 0.00 ATOM 60 C ALA 68 -35.606 20.767 -17.999 1.00 0.00 ATOM 60 O ALA 68 -35.599 20.252 -19.115 1.00 0.00 ATOM 61 N LEU 69 -35.621 22.051 -17.734 1.00 0.00 ATOM 61 CA LEU 69 -35.611 23.022 -18.829 1.00 0.00 ATOM 61 C LEU 69 -34.356 22.846 -19.806 1.00 0.00 ATOM 61 O LEU 69 -34.525 22.795 -21.022 1.00 0.00 ATOM 62 N LEU 70 -33.201 22.766 -19.105 1.00 0.00 ATOM 62 CA LEU 70 -31.833 22.726 -19.772 1.00 0.00 ATOM 62 C LEU 70 -31.885 21.456 -20.596 1.00 0.00 ATOM 62 O LEU 70 -31.427 21.442 -21.736 1.00 0.00 ATOM 62 N LEU 71 -32.474 20.343 -20.005 1.00 0.00 ATOM 63 CA LEU 71 -32.575 19.094 -20.765 1.00 0.00 ATOM 63 C LEU 71 -33.440 19.272 -22.017 1.00 0.00 ATOM 63 O LEU 71 -33.063 18.818 -23.095 1.00 0.00 ATOM 63 N HIS 72 -34.552 19.921 -21.848 1.00 0.00 ATOM 63 CA HIS 72 -35.432 20.199 -22.971 1.00 0.00 ATOM 64 C HIS 72 -34.807 21.076 -24.028 1.00 0.00 ATOM 64 O HIS 72 -34.994 20.834 -25.219 1.00 0.00 ATOM 64 N LEU 73 -34.021 22.146 -23.562 1.00 0.00 ATOM 65 CA LEU 73 -33.258 22.964 -24.548 1.00 0.00 ATOM 65 C LEU 73 -32.277 22.175 -25.325 1.00 0.00 ATOM 65 O LEU 73 -32.099 22.414 -26.516 1.00 0.00 ATOM 65 N ILE 74 -31.600 21.197 -24.695 1.00 0.00 ATOM 65 CA ILE 74 -30.666 20.266 -25.392 1.00 0.00 ATOM 66 C ILE 74 -31.437 19.498 -26.445 1.00 0.00 ATOM 66 O ILE 74 -30.966 19.355 -27.571 1.00 0.00 ATOM 66 N ASP 75 -32.615 19.005 -26.114 1.00 0.00 ATOM 66 CA ASP 75 -33.396 18.341 -27.114 1.00 0.00 ATOM 66 C ASP 75 -33.888 19.204 -28.386 1.00 0.00 ATOM 67 O ASP 75 -33.818 18.730 -29.517 1.00 0.00 ATOM 67 N LEU 76 -34.330 20.384 -28.078 1.00 0.00 ATOM 67 CA LEU 76 -34.813 21.332 -29.159 1.00 0.00 ATOM 67 C LEU 76 -33.691 21.644 -30.070 1.00 0.00 ATOM 67 O LEU 76 -33.868 21.641 -31.287 1.00 0.00 ATOM 68 N ALA 77 -32.499 21.914 -29.413 1.00 0.00 ATOM 68 CA ALA 77 -31.374 22.256 -30.206 1.00 0.00 ATOM 68 C ALA 77 -30.958 21.091 -31.118 1.00 0.00 ATOM 68 O ALA 77 -30.666 21.301 -32.293 1.00 0.00 ATOM 69 N LYS 78 -30.942 19.878 -30.574 1.00 0.00 ATOM 69 CA LYS 78 -30.553 18.737 -31.329 1.00 0.00 ATOM 69 C LYS 78 -31.546 18.469 -32.469 1.00 0.00 ATOM 69 O LYS 78 -31.136 18.122 -33.574 1.00 0.00 ATOM 70 N LYS 79 -32.871 18.640 -32.193 1.00 0.00 ATOM 70 CA LYS 79 -33.915 18.395 -33.212 1.00 0.00 ATOM 70 C LYS 79 -33.681 19.361 -34.385 1.00 0.00 ATOM 70 O LYS 79 -33.846 18.978 -35.540 1.00 0.00 ATOM 71 N GLN 80 -33.296 20.583 -34.059 1.00 0.00 ATOM 71 CA GLN 80 -32.984 21.572 -35.091 1.00 0.00 ATOM 71 C GLN 80 -31.838 21.137 -35.962 1.00 0.00 ATOM 71 O GLN 80 -31.872 21.343 -37.174 1.00 0.00 ATOM 72 N GLY 81 -30.851 20.534 -35.308 1.00 0.00 ATOM 72 CA GLY 81 -29.706 19.944 -35.953 1.00 0.00 ATOM 72 C GLY 81 -28.519 20.748 -35.441 1.00 0.00 ATOM 72 O GLY 81 -27.384 20.492 -35.837 1.00 0.00 ATOM 72 N ASN 82 -28.644 21.785 -34.519 1.00 0.00 ATOM 72 CA ASN 82 -27.631 22.437 -33.618 1.00 0.00 ATOM 72 C ASN 82 -27.070 21.581 -32.366 1.00 0.00 ATOM 72 O ASN 82 -27.714 20.627 -31.936 1.00 0.00 ATOM 73 N ASN 83 -25.934 21.953 -31.848 1.00 0.00 ATOM 73 CA ASN 83 -25.360 21.450 -30.551 1.00 0.00 ATOM 73 C ASN 83 -25.528 22.200 -29.344 1.00 0.00 ATOM 73 O ASN 83 -25.210 23.387 -29.307 1.00 0.00 ATOM 74 N VAL 84 -26.045 21.638 -28.155 1.00 0.00 ATOM 74 CA VAL 84 -25.970 22.598 -26.976 1.00 0.00 ATOM 74 C VAL 84 -25.066 22.250 -25.805 1.00 0.00 ATOM 74 O VAL 84 -25.189 21.170 -25.232 1.00 0.00 ATOM 75 N THR 85 -24.223 23.228 -25.546 1.00 0.00 ATOM 75 CA THR 85 -23.236 23.108 -24.584 1.00 0.00 ATOM 75 C THR 85 -23.413 23.899 -23.405 1.00 0.00 ATOM 75 O THR 85 -24.029 24.962 -23.462 1.00 0.00 ATOM 76 N LEU 86 -22.909 23.481 -22.287 1.00 0.00 ATOM 76 CA LEU 86 -22.949 24.179 -21.050 1.00 0.00 ATOM 76 C LEU 86 -21.576 24.460 -20.789 1.00 0.00 ATOM 76 O LEU 86 -20.738 23.563 -20.862 1.00 0.00 ATOM 76 N GLN 87 -21.283 25.676 -20.475 1.00 0.00 ATOM 77 CA GLN 87 -19.957 26.128 -20.122 1.00 0.00 ATOM 77 C GLN 87 -19.839 27.129 -18.891 1.00 0.00 ATOM 77 O GLN 87 -20.733 27.943 -18.670 1.00 0.00 ATOM 77 N GLY 88 -18.674 26.934 -18.216 1.00 0.00 ATOM 78 CA GLY 88 -18.283 27.791 -17.082 1.00 0.00 ATOM 78 C GLY 88 -19.235 27.764 -15.921 1.00 0.00 ATOM 78 O GLY 88 -19.541 28.809 -15.350 1.00 0.00 ATOM 78 N VAL 89 -19.694 26.485 -15.588 1.00 0.00 ATOM 78 CA VAL 89 -20.658 26.235 -14.552 1.00 0.00 ATOM 78 C VAL 89 -19.944 26.588 -13.158 1.00 0.00 ATOM 78 O VAL 89 -18.744 26.366 -13.006 1.00 0.00 ATOM 79 N ASN 90 -20.739 27.093 -12.270 1.00 0.00 ATOM 79 CA ASN 90 -20.511 27.381 -10.891 1.00 0.00 ATOM 79 C ASN 90 -20.591 26.052 -10.164 1.00 0.00 ATOM 79 O ASN 90 -21.235 25.123 -10.648 1.00 0.00 ATOM 80 N ASP 91 -19.900 26.076 -9.006 1.00 0.00 ATOM 80 CA ASP 91 -19.839 24.798 -8.297 1.00 0.00 ATOM 80 C ASP 91 -21.171 24.208 -7.852 1.00 0.00 ATOM 80 O ASP 91 -21.390 23.008 -7.994 1.00 0.00 ATOM 81 N LYS 92 -22.016 25.120 -7.328 1.00 0.00 ATOM 81 CA LYS 92 -23.291 24.674 -6.981 1.00 0.00 ATOM 81 C LYS 92 -24.125 24.149 -8.127 1.00 0.00 ATOM 81 O LYS 92 -24.784 23.120 -7.990 1.00 0.00 ATOM 82 N VAL 93 -24.124 24.836 -9.310 1.00 0.00 ATOM 82 CA VAL 93 -24.860 24.369 -10.483 1.00 0.00 ATOM 82 C VAL 93 -24.240 22.943 -10.903 1.00 0.00 ATOM 82 O VAL 93 -24.982 22.026 -11.248 1.00 0.00 ATOM 82 N TYR 94 -22.941 22.851 -10.839 1.00 0.00 ATOM 82 CA TYR 94 -22.329 21.526 -11.237 1.00 0.00 ATOM 83 C TYR 94 -22.716 20.415 -10.303 1.00 0.00 ATOM 83 O TYR 94 -22.990 19.303 -10.748 1.00 0.00 ATOM 84 N THR 95 -22.768 20.642 -8.957 1.00 0.00 ATOM 84 CA THR 95 -23.159 19.662 -7.998 1.00 0.00 ATOM 84 C THR 95 -24.552 19.264 -8.275 1.00 0.00 ATOM 84 O THR 95 -24.880 18.080 -8.210 1.00 0.00 ATOM 84 N LEU 96 -25.404 20.241 -8.601 1.00 0.00 ATOM 85 CA LEU 96 -26.817 19.937 -8.892 1.00 0.00 ATOM 85 C LEU 96 -26.992 19.003 -10.131 1.00 0.00 ATOM 85 O LEU 96 -27.768 18.050 -10.079 1.00 0.00 ATOM 85 N ALA 97 -26.253 19.327 -11.185 1.00 0.00 ATOM 85 CA ALA 97 -26.329 18.589 -12.431 1.00 0.00 ATOM 86 C ALA 97 -25.855 17.070 -12.137 1.00 0.00 ATOM 86 O ALA 97 -26.483 16.125 -12.608 1.00 0.00 ATOM 86 N LYS 98 -24.733 17.032 -11.333 1.00 0.00 ATOM 86 CA LYS 98 -24.230 15.744 -10.998 1.00 0.00 ATOM 86 C LYS 98 -25.126 14.888 -10.207 1.00 0.00 ATOM 86 O LYS 98 -25.240 13.696 -10.482 1.00 0.00 ATOM 87 N LEU 99 -25.778 15.574 -9.192 1.00 0.00 ATOM 87 CA LEU 99 -26.737 14.850 -8.309 1.00 0.00 ATOM 87 C LEU 99 -27.923 14.263 -9.178 1.00 0.00 ATOM 87 O LEU 99 -28.320 13.117 -8.986 1.00 0.00 ATOM 88 N TYR 100 -28.400 15.131 -10.100 1.00 0.00 ATOM 88 CA TYR 100 -29.462 14.882 -11.022 1.00 0.00 ATOM 88 C TYR 100 -29.301 13.808 -12.147 1.00 0.00 ATOM 88 O TYR 100 -30.225 13.038 -12.402 1.00 0.00 ATOM 89 N ASN 101 -28.034 13.834 -12.780 1.00 0.00 ATOM 89 CA ASN 101 -27.615 13.088 -14.042 1.00 0.00 ATOM 89 C ASN 101 -27.709 13.840 -15.329 1.00 0.00 ATOM 89 O ASN 101 -27.585 13.250 -16.399 1.00 0.00 ATOM 90 N LEU 102 -27.920 15.104 -15.156 1.00 0.00 ATOM 90 CA LEU 102 -27.875 16.171 -16.209 1.00 0.00 ATOM 90 C LEU 102 -26.476 16.464 -16.972 1.00 0.00 ATOM 90 O LEU 102 -26.452 16.574 -18.196 1.00 0.00 ATOM 91 N PRO 103 -25.285 16.591 -16.249 1.00 0.00 ATOM 91 CA PRO 103 -24.025 16.610 -17.117 1.00 0.00 ATOM 91 C PRO 103 -24.070 15.234 -17.816 1.00 0.00 ATOM 91 O PRO 103 -23.388 15.028 -18.817 1.00 0.00 ATOM 92 N ALA 104 -24.886 14.163 -17.359 1.00 0.00 ATOM 92 CA ALA 104 -24.919 12.974 -18.303 1.00 0.00 ATOM 92 C ALA 104 -25.554 13.282 -19.589 1.00 0.00 ATOM 92 O ALA 104 -25.051 12.880 -20.637 1.00 0.00 ATOM 92 N ASP 105 -26.604 13.965 -19.581 1.00 0.00 ATOM 92 CA ASP 105 -27.163 14.403 -20.913 1.00 0.00 ATOM 92 C ASP 105 -26.638 15.728 -21.628 1.00 0.00 ATOM 93 O ASP 105 -26.135 15.667 -22.748 1.00 0.00 ATOM 93 N VAL 106 -26.721 16.971 -21.028 1.00 0.00 ATOM 93 CA VAL 106 -26.415 18.205 -21.749 1.00 0.00 ATOM 93 C VAL 106 -25.011 18.463 -21.869 1.00 0.00 ATOM 93 O VAL 106 -24.233 18.049 -21.012 1.00 0.00 ATOM 94 N LEU 107 -24.462 19.191 -22.943 1.00 0.00 ATOM 94 CA LEU 107 -23.052 18.844 -23.186 1.00 0.00 ATOM 94 C LEU 107 -22.070 19.836 -22.766 1.00 0.00 ATOM 94 O LEU 107 -22.289 21.033 -22.945 1.00 0.00 ATOM 95 N PRO 108 -20.921 19.333 -22.185 1.00 0.00 ATOM 95 CA PRO 108 -19.889 20.231 -21.727 1.00 0.00 ATOM 95 C PRO 108 -19.148 20.914 -22.765 1.00 0.00 ATOM 95 O PRO 108 -18.919 20.348 -23.832 1.00 0.00 ATOM 96 N ARG 109 -18.780 22.199 -22.355 1.00 0.00 ATOM 96 CA ARG 109 -17.452 22.713 -22.891 1.00 0.00 ATOM 96 C ARG 109 -17.131 23.895 -22.009 1.00 0.00 ATOM 96 O ARG 109 -17.917 24.212 -21.099 1.00 0.00 TER END