####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 98 ( 392), selected 98 , name R0993s2TS433_2 # Molecule2: number of CA atoms 98 ( 750), selected 98 , name R0993s2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap R0993s2TS433_2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 98 12 - 109 3.09 3.09 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 82 24 - 105 1.99 3.25 LCS_AVERAGE: 76.01 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 33 49 - 81 0.96 3.68 LCS_AVERAGE: 19.00 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 98 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT F 12 F 12 4 10 98 3 4 5 7 10 11 11 11 11 11 11 11 16 18 91 97 97 98 98 98 LCS_GDT Q 13 Q 13 4 10 98 3 4 5 7 10 11 11 30 54 76 81 90 95 96 97 97 97 98 98 98 LCS_GDT S 14 S 14 9 10 98 5 5 9 9 10 11 13 75 91 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT E 15 E 15 9 10 98 5 7 9 9 10 15 42 83 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT S 16 S 16 9 10 98 5 7 9 9 10 28 71 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT L 17 L 17 9 10 98 5 7 9 9 15 22 64 84 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT S 18 S 18 9 10 98 5 7 14 22 28 41 66 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT W 19 W 19 9 10 98 5 7 14 22 28 48 74 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT M 20 M 20 9 63 98 5 8 14 22 28 49 79 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT Q 21 Q 21 9 74 98 5 7 9 19 28 34 74 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT T 22 T 22 9 81 98 5 7 9 22 28 44 66 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT G 23 G 23 12 81 98 3 14 27 42 58 71 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT D 24 D 24 12 82 98 17 35 45 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT T 25 T 25 12 82 98 17 35 45 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT L 26 L 26 12 82 98 17 33 45 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT A 27 A 27 12 82 98 17 35 45 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT L 28 L 28 12 82 98 17 35 45 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT S 29 S 29 12 82 98 17 35 45 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT G 30 G 30 12 82 98 17 35 45 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT E 31 E 31 12 82 98 12 35 45 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT L 32 L 32 12 82 98 13 35 45 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT D 33 D 33 12 82 98 17 35 45 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT Q 34 Q 34 12 82 98 5 24 45 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT D 35 D 35 11 82 98 3 7 16 38 61 74 81 87 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT V 36 V 36 11 82 98 4 13 30 57 71 76 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT L 37 L 37 11 82 98 5 15 35 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT L 38 L 38 11 82 98 7 15 36 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT P 39 P 39 11 82 98 7 11 35 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT L 40 L 40 9 82 98 7 11 27 53 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT W 41 W 41 9 82 98 7 15 32 59 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT E 42 E 42 9 82 98 7 13 27 43 70 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT M 43 M 43 9 82 98 7 8 16 34 54 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT R 44 R 44 9 82 98 7 8 26 42 63 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT E 45 E 45 8 82 98 6 14 45 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT E 46 E 46 8 82 98 17 35 45 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT A 47 A 47 8 82 98 6 8 31 59 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT V 48 V 48 8 82 98 6 8 31 59 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT K 49 K 49 33 82 98 3 8 32 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT G 50 G 50 33 82 98 3 22 45 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT I 51 I 51 33 82 98 3 15 44 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT T 52 T 52 33 82 98 8 33 45 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT C 53 C 53 33 82 98 16 35 45 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT I 54 I 54 33 82 98 11 35 45 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT D 55 D 55 33 82 98 17 35 45 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT L 56 L 56 33 82 98 17 35 45 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT S 57 S 57 33 82 98 16 35 45 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT R 58 R 58 33 82 98 4 14 45 54 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT V 59 V 59 33 82 98 17 35 45 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT S 60 S 60 33 82 98 16 35 45 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT R 61 R 61 33 82 98 17 35 45 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT V 62 V 62 33 82 98 17 35 45 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT D 63 D 63 33 82 98 17 35 45 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT T 64 T 64 33 82 98 9 35 45 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT G 65 G 65 33 82 98 17 35 45 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT G 66 G 66 33 82 98 13 35 45 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT L 67 L 67 33 82 98 13 33 45 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT A 68 A 68 33 82 98 13 35 45 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT L 69 L 69 33 82 98 13 35 45 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT L 70 L 70 33 82 98 13 35 45 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT L 71 L 71 33 82 98 13 35 45 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT H 72 H 72 33 82 98 13 35 45 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT L 73 L 73 33 82 98 13 35 45 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT I 74 I 74 33 82 98 13 29 45 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT D 75 D 75 33 82 98 13 30 45 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT L 76 L 76 33 82 98 13 35 45 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT A 77 A 77 33 82 98 13 35 45 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT K 78 K 78 33 82 98 13 35 45 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT K 79 K 79 33 82 98 9 35 45 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT Q 80 Q 80 33 82 98 12 35 45 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT G 81 G 81 33 82 98 4 29 44 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT N 82 N 82 32 82 98 5 15 26 53 65 74 81 86 90 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT N 83 N 83 25 82 98 5 14 32 57 68 76 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT V 84 V 84 14 82 98 5 17 35 57 68 76 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT T 85 T 85 14 82 98 5 17 41 59 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT L 86 L 86 14 82 98 8 27 45 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT Q 87 Q 87 14 82 98 17 35 45 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT G 88 G 88 15 82 98 5 24 45 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT V 89 V 89 15 82 98 5 18 44 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT N 90 N 90 15 82 98 5 17 44 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT D 91 D 91 15 82 98 5 17 43 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT K 92 K 92 15 82 98 6 17 44 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT V 93 V 93 15 82 98 6 17 44 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT Y 94 Y 94 15 82 98 6 17 42 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT T 95 T 95 15 82 98 6 19 44 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT L 96 L 96 15 82 98 4 17 42 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT A 97 A 97 15 82 98 6 17 44 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT K 98 K 98 15 82 98 6 17 42 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT L 99 L 99 15 82 98 6 17 42 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT Y 100 Y 100 15 82 98 6 14 36 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT N 101 N 101 15 82 98 6 13 21 58 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT L 102 L 102 15 82 98 6 13 21 44 70 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT P 103 P 103 5 82 98 4 4 5 6 10 18 52 80 85 92 94 95 96 96 97 97 97 98 98 98 LCS_GDT A 104 A 104 5 82 98 3 8 24 38 69 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT D 105 D 105 5 82 98 4 4 15 36 62 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT V 106 V 106 5 64 98 4 4 17 33 60 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT L 107 L 107 5 64 98 4 5 11 14 29 63 79 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT P 108 P 108 4 64 98 4 11 17 47 68 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 LCS_GDT R 109 R 109 4 5 98 4 4 4 4 5 8 9 53 81 89 93 95 96 96 97 97 97 98 98 98 LCS_AVERAGE LCS_A: 65.00 ( 19.00 76.01 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 17 35 45 60 71 78 81 88 92 93 94 95 96 96 97 97 97 98 98 98 GDT PERCENT_AT 17.35 35.71 45.92 61.22 72.45 79.59 82.65 89.80 93.88 94.90 95.92 96.94 97.96 97.96 98.98 98.98 98.98 100.00 100.00 100.00 GDT RMS_LOCAL 0.34 0.73 0.90 1.35 1.57 1.82 1.86 2.31 2.48 2.50 2.56 2.62 2.70 2.70 2.84 2.84 2.84 3.09 3.09 3.09 GDT RMS_ALL_AT 3.61 3.61 3.64 3.36 3.29 3.25 3.26 3.17 3.14 3.14 3.13 3.13 3.12 3.12 3.10 3.10 3.10 3.09 3.09 3.09 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA F 12 F 12 13.466 7 0.377 0.377 16.064 0.000 0.000 - LGA Q 13 Q 13 9.750 5 0.220 0.220 10.425 0.000 0.000 - LGA S 14 S 14 5.890 2 0.698 0.698 7.633 0.000 0.000 - LGA E 15 E 15 5.672 5 0.066 0.066 5.834 0.000 0.000 - LGA S 16 S 16 4.887 2 0.092 0.092 5.044 1.364 0.909 - LGA L 17 L 17 5.464 4 0.044 0.044 5.959 0.000 0.000 - LGA S 18 S 18 5.314 2 0.197 0.197 5.383 0.000 0.000 - LGA W 19 W 19 4.810 10 0.076 0.076 5.462 1.364 0.390 - LGA M 20 M 20 4.790 4 0.067 0.067 4.790 2.727 1.364 - LGA Q 21 Q 21 4.671 5 0.213 0.213 4.705 2.727 1.212 - LGA T 22 T 22 4.878 3 0.632 0.632 4.878 4.091 2.338 - LGA G 23 G 23 3.746 0 0.589 0.589 4.960 12.273 12.273 - LGA D 24 D 24 1.605 4 0.165 0.165 1.816 54.545 27.273 - LGA T 25 T 25 1.460 3 0.083 0.083 2.078 51.364 29.351 - LGA L 26 L 26 1.444 4 0.086 0.086 1.654 61.818 30.909 - LGA A 27 A 27 1.472 1 0.092 0.092 1.800 58.182 46.545 - LGA L 28 L 28 1.323 4 0.365 0.365 3.422 46.818 23.409 - LGA S 29 S 29 1.427 2 0.136 0.136 1.531 61.818 41.212 - LGA G 30 G 30 1.615 0 0.258 0.258 2.191 47.727 47.727 - LGA E 31 E 31 1.341 5 0.055 0.055 1.341 73.636 32.727 - LGA L 32 L 32 1.350 4 0.128 0.128 1.511 61.818 30.909 - LGA D 33 D 33 1.421 4 0.322 0.322 3.139 50.000 25.000 - LGA Q 34 Q 34 1.478 5 0.208 0.208 2.691 49.091 21.818 - LGA D 35 D 35 3.988 4 0.088 0.088 4.196 13.182 6.591 - LGA V 36 V 36 2.292 3 0.246 0.246 2.592 35.455 20.260 - LGA L 37 L 37 2.124 4 0.038 0.038 2.262 38.182 19.091 - LGA L 38 L 38 2.122 4 0.135 0.135 2.279 44.545 22.273 - LGA P 39 P 39 1.769 3 0.034 0.034 2.184 47.727 27.273 - LGA L 40 L 40 2.134 4 0.049 0.049 2.368 44.545 22.273 - LGA W 41 W 41 1.984 10 0.124 0.124 3.228 39.545 11.299 - LGA E 42 E 42 2.560 5 0.114 0.114 3.592 25.909 11.515 - LGA M 43 M 43 3.253 4 0.334 0.334 3.253 27.727 13.864 - LGA R 44 R 44 2.978 7 0.117 0.117 3.254 33.636 12.231 - LGA E 45 E 45 1.649 5 0.056 0.056 2.127 55.000 24.444 - LGA E 46 E 46 1.195 5 0.054 0.054 1.492 69.545 30.909 - LGA A 47 A 47 1.883 1 0.017 0.017 2.825 45.455 36.364 - LGA V 48 V 48 1.878 3 0.059 0.059 2.684 41.818 23.896 - LGA K 49 K 49 1.985 5 0.039 0.039 2.415 47.727 21.212 - LGA G 50 G 50 1.567 0 0.239 0.239 1.733 58.182 58.182 - LGA I 51 I 51 1.612 4 0.146 0.146 1.939 54.545 27.273 - LGA T 52 T 52 2.043 3 0.224 0.224 3.266 36.364 20.779 - LGA C 53 C 53 1.550 2 0.095 0.095 1.713 50.909 33.939 - LGA I 54 I 54 1.370 4 0.152 0.152 1.704 61.818 30.909 - LGA D 55 D 55 1.031 4 0.087 0.087 1.111 69.545 34.773 - LGA L 56 L 56 1.273 4 0.078 0.078 1.341 65.455 32.727 - LGA S 57 S 57 1.130 2 0.062 0.062 1.972 58.182 38.788 - LGA R 58 R 58 2.685 7 0.104 0.104 2.790 35.909 13.058 - LGA V 59 V 59 1.603 3 0.132 0.132 2.982 41.818 23.896 - LGA S 60 S 60 2.182 2 0.087 0.087 2.541 38.636 25.758 - LGA R 61 R 61 1.712 7 0.024 0.024 1.726 50.909 18.512 - LGA V 62 V 62 1.585 3 0.135 0.135 1.688 54.545 31.169 - LGA D 63 D 63 1.670 4 0.081 0.081 1.679 50.909 25.455 - LGA T 64 T 64 1.859 3 0.088 0.088 1.859 54.545 31.169 - LGA G 65 G 65 1.328 0 0.065 0.065 1.540 61.818 61.818 - LGA G 66 G 66 1.768 0 0.029 0.029 1.883 50.909 50.909 - LGA L 67 L 67 2.181 4 0.023 0.023 2.181 44.545 22.273 - LGA A 68 A 68 1.727 1 0.034 0.034 1.848 50.909 40.727 - LGA L 69 L 69 1.520 4 0.049 0.049 1.589 58.182 29.091 - LGA L 70 L 70 1.564 4 0.062 0.062 1.703 50.909 25.455 - LGA L 71 L 71 1.725 4 0.008 0.008 1.775 50.909 25.455 - LGA H 72 H 72 1.577 6 0.025 0.025 1.719 50.909 20.364 - LGA L 73 L 73 1.559 4 0.088 0.088 1.617 54.545 27.273 - LGA I 74 I 74 2.066 4 0.023 0.023 2.117 41.364 20.682 - LGA D 75 D 75 2.058 4 0.087 0.087 2.248 38.182 19.091 - LGA L 76 L 76 1.666 4 0.063 0.063 1.790 50.909 25.455 - LGA A 77 A 77 1.754 1 0.015 0.015 1.937 50.909 40.727 - LGA K 78 K 78 1.915 5 0.063 0.063 1.967 50.909 22.626 - LGA K 79 K 79 2.061 5 0.204 0.204 2.061 51.364 22.828 - LGA Q 80 Q 80 1.771 5 0.112 0.112 2.038 47.727 21.212 - LGA G 81 G 81 1.949 0 0.483 0.483 2.310 44.545 44.545 - LGA N 82 N 82 4.260 4 0.142 0.142 4.260 20.000 10.000 - LGA N 83 N 83 3.410 4 0.209 0.209 3.891 16.364 8.182 - LGA V 84 V 84 3.219 3 0.142 0.142 3.489 18.182 10.390 - LGA T 85 T 85 2.664 3 0.062 0.062 2.838 32.727 18.701 - LGA L 86 L 86 1.913 4 0.089 0.089 2.201 47.727 23.864 - LGA Q 87 Q 87 1.198 5 0.090 0.090 1.298 78.182 34.747 - LGA G 88 G 88 0.892 0 0.082 0.082 0.922 81.818 81.818 - LGA V 89 V 89 1.062 3 0.074 0.074 1.271 69.545 39.740 - LGA N 90 N 90 1.398 4 0.071 0.071 1.499 65.455 32.727 - LGA D 91 D 91 1.412 4 0.067 0.067 1.468 65.455 32.727 - LGA K 92 K 92 1.103 5 0.217 0.217 1.271 65.455 29.091 - LGA V 93 V 93 1.332 3 0.043 0.043 1.554 58.182 33.247 - LGA Y 94 Y 94 1.901 8 0.075 0.075 1.901 50.909 16.970 - LGA T 95 T 95 1.281 3 0.060 0.060 1.391 65.455 37.403 - LGA L 96 L 96 1.729 4 0.181 0.181 1.729 50.909 25.455 - LGA A 97 A 97 1.470 1 0.039 0.039 1.631 58.182 46.545 - LGA K 98 K 98 2.301 5 0.067 0.067 2.636 38.636 17.172 - LGA L 99 L 99 2.404 4 0.071 0.071 2.582 35.455 17.727 - LGA Y 100 Y 100 2.096 8 0.258 0.258 2.096 48.182 16.061 - LGA N 101 N 101 2.416 4 0.154 0.154 2.969 32.727 16.364 - LGA L 102 L 102 2.724 4 0.637 0.637 3.879 21.818 10.909 - LGA P 103 P 103 6.151 3 0.623 0.623 6.151 7.273 4.156 - LGA A 104 A 104 2.603 1 0.048 0.048 3.570 25.909 20.727 - LGA D 105 D 105 3.166 4 0.102 0.102 3.380 31.364 15.682 - LGA V 106 V 106 3.522 3 0.614 0.614 4.049 13.182 7.532 - LGA L 107 L 107 4.491 4 0.050 0.050 6.100 4.091 2.045 - LGA P 108 P 108 3.573 3 0.065 0.065 5.224 7.727 4.416 - LGA R 109 R 109 7.087 8 0.506 0.506 7.087 0.000 0.000 - # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 98 392 392 100.00 750 392 52.27 98 0 SUMMARY(RMSD_GDC): 3.089 3.081 3.081 40.756 23.063 0.000 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 98 98 4.0 88 2.31 71.429 76.624 3.648 LGA_LOCAL RMSD: 2.312 Number of atoms: 88 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 3.172 Number of assigned atoms: 98 Std_ASGN_ATOMS RMSD: 3.089 Standard rmsd on all 98 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.875112 * X + -0.330452 * Y + -0.353526 * Z + -42.071854 Y_new = -0.398682 * X + -0.078252 * Y + -0.913745 * Z + 37.737583 Z_new = 0.274284 * X + 0.940573 * Y + -0.200224 * Z + -13.599338 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.427483 -0.277845 1.780540 [DEG: -24.4930 -15.9194 102.0174 ] ZXZ: -0.369161 1.772383 0.283746 [DEG: -21.1514 101.5501 16.2574 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: R0993s2TS433_2 REMARK 2: R0993s2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap R0993s2TS433_2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 98 98 4.0 88 2.31 76.624 3.09 REMARK ---------------------------------------------------------- MOLECULE R0993s2TS433_2 PFRMAT TS TARGET R0993s2 MODEL 2 PARENT N/A ATOM 11 N PHE 12 -42.072 37.738 -13.599 1.00 0.00 ATOM 11 CA PHE 12 -41.189 38.374 -12.652 1.00 0.00 ATOM 12 C PHE 12 -39.667 38.270 -12.828 1.00 0.00 ATOM 12 O PHE 12 -39.194 37.496 -13.659 1.00 0.00 ATOM 13 N GLN 13 -38.868 38.973 -12.116 1.00 0.00 ATOM 13 CA GLN 13 -37.687 39.742 -12.505 1.00 0.00 ATOM 13 C GLN 13 -36.665 38.819 -13.149 1.00 0.00 ATOM 13 O GLN 13 -36.035 39.191 -14.138 1.00 0.00 ATOM 14 N SER 14 -36.513 37.686 -12.630 1.00 0.00 ATOM 14 CA SER 14 -35.308 37.097 -12.027 1.00 0.00 ATOM 14 C SER 14 -34.126 36.632 -12.910 1.00 0.00 ATOM 14 O SER 14 -33.031 36.399 -12.402 1.00 0.00 ATOM 14 N GLU 15 -34.365 36.509 -14.215 1.00 0.00 ATOM 14 CA GLU 15 -33.438 36.081 -15.156 1.00 0.00 ATOM 14 C GLU 15 -33.333 36.914 -16.308 1.00 0.00 ATOM 15 O GLU 15 -34.347 37.291 -16.891 1.00 0.00 ATOM 15 N SER 16 -32.131 37.233 -16.688 1.00 0.00 ATOM 15 CA SER 16 -31.728 37.990 -17.796 1.00 0.00 ATOM 15 C SER 16 -30.747 37.303 -18.845 1.00 0.00 ATOM 16 O SER 16 -29.743 36.712 -18.455 1.00 0.00 ATOM 16 N LEU 17 -31.162 37.472 -20.070 1.00 0.00 ATOM 16 CA LEU 17 -30.451 36.640 -21.124 1.00 0.00 ATOM 16 C LEU 17 -29.564 37.660 -21.987 1.00 0.00 ATOM 16 O LEU 17 -30.089 38.632 -22.523 1.00 0.00 ATOM 17 N SER 18 -28.311 37.452 -22.120 1.00 0.00 ATOM 17 CA SER 18 -27.370 38.281 -22.752 1.00 0.00 ATOM 17 C SER 18 -26.999 37.439 -23.917 1.00 0.00 ATOM 17 O SER 18 -26.316 36.431 -23.757 1.00 0.00 ATOM 18 N TRP 19 -27.398 37.794 -25.058 1.00 0.00 ATOM 18 CA TRP 19 -27.282 36.911 -26.241 1.00 0.00 ATOM 18 C TRP 19 -26.352 37.442 -27.319 1.00 0.00 ATOM 18 O TRP 19 -26.598 38.513 -27.871 1.00 0.00 ATOM 19 N MET 20 -25.275 36.573 -27.556 1.00 0.00 ATOM 19 CA MET 20 -24.436 36.982 -28.632 1.00 0.00 ATOM 19 C MET 20 -24.530 35.964 -29.893 1.00 0.00 ATOM 19 O MET 20 -24.697 34.762 -29.704 1.00 0.00 ATOM 20 N GLN 21 -24.413 36.484 -31.076 1.00 0.00 ATOM 20 CA GLN 21 -24.167 35.750 -32.223 1.00 0.00 ATOM 20 C GLN 21 -22.640 35.940 -32.419 1.00 0.00 ATOM 20 O GLN 21 -22.031 36.770 -31.748 1.00 0.00 ATOM 21 N THR 22 -22.141 35.071 -33.422 1.00 0.00 ATOM 21 CA THR 22 -20.710 34.947 -33.920 1.00 0.00 ATOM 21 C THR 22 -19.736 34.150 -33.114 1.00 0.00 ATOM 21 O THR 22 -18.987 33.349 -33.668 1.00 0.00 ATOM 22 N GLY 23 -19.762 34.376 -31.786 1.00 0.00 ATOM 22 CA GLY 23 -19.513 33.181 -30.896 1.00 0.00 ATOM 22 C GLY 23 -20.762 32.249 -30.674 1.00 0.00 ATOM 22 O GLY 23 -20.676 31.267 -29.942 1.00 0.00 ATOM 22 N ASP 24 -21.850 32.556 -31.286 1.00 0.00 ATOM 22 CA ASP 24 -23.084 31.688 -31.167 1.00 0.00 ATOM 22 C ASP 24 -23.580 31.362 -29.709 1.00 0.00 ATOM 23 O ASP 24 -23.860 30.206 -29.397 1.00 0.00 ATOM 23 N THR 25 -23.700 32.315 -28.829 1.00 0.00 ATOM 23 CA THR 25 -23.330 31.920 -27.484 1.00 0.00 ATOM 23 C THR 25 -24.165 32.747 -26.363 1.00 0.00 ATOM 23 O THR 25 -24.158 33.976 -26.370 1.00 0.00 ATOM 24 N LEU 26 -24.782 31.990 -25.525 1.00 0.00 ATOM 24 CA LEU 26 -25.954 32.487 -24.988 1.00 0.00 ATOM 24 C LEU 26 -25.714 32.546 -23.584 1.00 0.00 ATOM 24 O LEU 26 -25.333 31.545 -22.980 1.00 0.00 ATOM 25 N ALA 27 -25.894 33.625 -22.934 1.00 0.00 ATOM 25 CA ALA 27 -25.638 33.631 -21.444 1.00 0.00 ATOM 25 C ALA 27 -26.749 34.109 -20.511 1.00 0.00 ATOM 25 O ALA 27 -27.256 35.216 -20.672 1.00 0.00 ATOM 25 N LEU 28 -27.049 33.147 -19.527 1.00 0.00 ATOM 26 CA LEU 28 -28.301 32.826 -18.921 1.00 0.00 ATOM 26 C LEU 28 -28.422 33.139 -17.354 1.00 0.00 ATOM 26 O LEU 28 -28.471 32.216 -16.543 1.00 0.00 ATOM 26 N SER 29 -28.476 34.501 -16.968 1.00 0.00 ATOM 26 CA SER 29 -27.848 35.132 -15.858 1.00 0.00 ATOM 27 C SER 29 -29.113 35.411 -14.914 1.00 0.00 ATOM 27 O SER 29 -29.957 36.241 -15.243 1.00 0.00 ATOM 27 N GLY 30 -29.078 34.696 -13.878 1.00 0.00 ATOM 27 CA GLY 30 -29.511 35.026 -12.503 1.00 0.00 ATOM 27 C GLY 30 -30.063 33.801 -11.728 1.00 0.00 ATOM 27 O GLY 30 -29.291 32.950 -11.289 1.00 0.00 ATOM 28 N GLU 31 -31.361 33.842 -11.648 1.00 0.00 ATOM 28 CA GLU 31 -32.091 32.606 -11.431 1.00 0.00 ATOM 28 C GLU 31 -32.499 31.781 -12.656 1.00 0.00 ATOM 28 O GLU 31 -32.972 32.338 -13.644 1.00 0.00 ATOM 29 N LEU 32 -32.377 30.505 -12.716 1.00 0.00 ATOM 29 CA LEU 32 -33.325 29.584 -13.483 1.00 0.00 ATOM 29 C LEU 32 -34.147 28.581 -12.545 1.00 0.00 ATOM 29 O LEU 32 -33.591 27.599 -12.056 1.00 0.00 ATOM 29 N ASP 33 -35.487 28.965 -12.392 1.00 0.00 ATOM 30 CA ASP 33 -36.445 28.498 -11.452 1.00 0.00 ATOM 30 C ASP 33 -37.564 27.894 -12.405 1.00 0.00 ATOM 30 O ASP 33 -37.383 26.814 -12.961 1.00 0.00 ATOM 30 N GLN 34 -38.668 28.677 -12.524 1.00 0.00 ATOM 30 CA GLN 34 -40.033 28.331 -12.916 1.00 0.00 ATOM 31 C GLN 34 -40.714 29.118 -14.133 1.00 0.00 ATOM 31 O GLN 34 -40.732 28.619 -15.255 1.00 0.00 ATOM 31 N ASP 35 -41.229 30.344 -13.771 1.00 0.00 ATOM 31 CA ASP 35 -41.801 31.276 -14.645 1.00 0.00 ATOM 32 C ASP 35 -40.639 31.666 -15.602 1.00 0.00 ATOM 32 O ASP 35 -40.854 31.817 -16.802 1.00 0.00 ATOM 32 N VAL 36 -39.420 31.798 -14.934 1.00 0.00 ATOM 32 CA VAL 36 -38.169 31.908 -15.585 1.00 0.00 ATOM 32 C VAL 36 -37.895 30.815 -16.528 1.00 0.00 ATOM 33 O VAL 36 -37.408 31.058 -17.628 1.00 0.00 ATOM 33 N LEU 37 -38.203 29.550 -16.142 1.00 0.00 ATOM 33 CA LEU 37 -37.935 28.594 -17.135 1.00 0.00 ATOM 33 C LEU 37 -38.829 28.629 -18.383 1.00 0.00 ATOM 33 O LEU 37 -38.381 28.283 -19.473 1.00 0.00 ATOM 34 N LEU 38 -40.073 29.021 -18.355 1.00 0.00 ATOM 34 CA LEU 38 -41.024 29.246 -19.456 1.00 0.00 ATOM 34 C LEU 38 -40.324 30.315 -20.414 1.00 0.00 ATOM 34 O LEU 38 -40.217 30.088 -21.616 1.00 0.00 ATOM 35 N PRO 39 -39.878 31.434 -19.795 1.00 0.00 ATOM 35 CA PRO 39 -39.200 32.477 -20.688 1.00 0.00 ATOM 35 C PRO 39 -37.914 32.007 -21.285 1.00 0.00 ATOM 35 O PRO 39 -37.600 32.352 -22.421 1.00 0.00 ATOM 36 N LEU 40 -37.116 31.178 -20.517 1.00 0.00 ATOM 36 CA LEU 40 -35.849 30.701 -21.092 1.00 0.00 ATOM 36 C LEU 40 -36.079 29.891 -22.243 1.00 0.00 ATOM 36 O LEU 40 -35.368 30.019 -23.238 1.00 0.00 ATOM 36 N TRP 41 -37.089 29.013 -22.175 1.00 0.00 ATOM 37 CA TRP 41 -37.474 28.160 -23.194 1.00 0.00 ATOM 37 C TRP 41 -37.917 28.813 -24.426 1.00 0.00 ATOM 37 O TRP 41 -37.480 28.438 -25.512 1.00 0.00 ATOM 38 N GLU 42 -38.804 29.828 -24.275 1.00 0.00 ATOM 38 CA GLU 42 -39.298 30.557 -25.417 1.00 0.00 ATOM 38 C GLU 42 -38.115 31.256 -26.153 1.00 0.00 ATOM 38 O GLU 42 -38.048 31.225 -27.380 1.00 0.00 ATOM 39 N MET 43 -37.199 31.874 -25.311 1.00 0.00 ATOM 39 CA MET 43 -36.015 32.567 -25.855 1.00 0.00 ATOM 39 C MET 43 -35.130 31.521 -26.492 1.00 0.00 ATOM 39 O MET 43 -34.571 31.755 -27.561 1.00 0.00 ATOM 40 N ARG 44 -34.948 30.353 -25.927 1.00 0.00 ATOM 40 CA ARG 44 -34.102 29.350 -26.643 1.00 0.00 ATOM 40 C ARG 44 -34.641 28.868 -27.877 1.00 0.00 ATOM 40 O ARG 44 -33.904 28.693 -28.845 1.00 0.00 ATOM 41 N GLU 45 -36.004 28.666 -27.790 1.00 0.00 ATOM 41 CA GLU 45 -36.667 28.181 -29.083 1.00 0.00 ATOM 41 C GLU 45 -36.462 29.247 -30.126 1.00 0.00 ATOM 41 O GLU 45 -36.098 28.941 -31.259 1.00 0.00 ATOM 42 N GLU 46 -36.656 30.495 -29.842 1.00 0.00 ATOM 42 CA GLU 46 -36.393 31.448 -30.868 1.00 0.00 ATOM 42 C GLU 46 -35.012 31.515 -31.298 1.00 0.00 ATOM 42 O GLU 46 -34.740 31.570 -32.496 1.00 0.00 ATOM 43 N ALA 47 -34.097 31.500 -30.224 1.00 0.00 ATOM 43 CA ALA 47 -32.657 31.691 -30.529 1.00 0.00 ATOM 43 C ALA 47 -31.983 30.531 -31.279 1.00 0.00 ATOM 43 O ALA 47 -31.161 30.764 -32.163 1.00 0.00 ATOM 44 N VAL 48 -32.352 29.306 -30.910 1.00 0.00 ATOM 44 CA VAL 48 -31.745 28.050 -31.468 1.00 0.00 ATOM 44 C VAL 48 -32.376 27.687 -32.914 1.00 0.00 ATOM 44 O VAL 48 -32.154 26.592 -33.426 1.00 0.00 ATOM 44 N LYS 49 -33.059 28.634 -33.367 1.00 0.00 ATOM 45 CA LYS 49 -32.762 29.040 -34.746 1.00 0.00 ATOM 45 C LYS 49 -31.214 29.368 -35.050 1.00 0.00 ATOM 45 O LYS 49 -30.700 28.990 -36.100 1.00 0.00 ATOM 45 N GLY 50 -30.562 30.041 -34.122 1.00 0.00 ATOM 46 CA GLY 50 -29.247 30.427 -34.428 1.00 0.00 ATOM 46 C GLY 50 -28.072 29.696 -33.809 1.00 0.00 ATOM 46 O GLY 50 -27.070 29.459 -34.481 1.00 0.00 ATOM 46 N ILE 51 -28.104 29.310 -32.589 1.00 0.00 ATOM 46 CA ILE 51 -26.974 29.427 -31.658 1.00 0.00 ATOM 46 C ILE 51 -26.821 28.113 -30.799 1.00 0.00 ATOM 46 O ILE 51 -27.770 27.341 -30.679 1.00 0.00 ATOM 47 N THR 52 -25.580 27.986 -30.256 1.00 0.00 ATOM 47 CA THR 52 -25.195 26.633 -29.676 1.00 0.00 ATOM 47 C THR 52 -24.708 26.538 -28.156 1.00 0.00 ATOM 47 O THR 52 -24.923 25.521 -27.501 1.00 0.00 ATOM 48 N CYS 53 -24.109 27.519 -27.641 1.00 0.00 ATOM 48 CA CYS 53 -23.634 27.296 -26.301 1.00 0.00 ATOM 48 C CYS 53 -24.286 28.017 -25.124 1.00 0.00 ATOM 48 O CYS 53 -24.522 29.221 -25.190 1.00 0.00 ATOM 48 N ILE 54 -24.615 27.411 -24.008 1.00 0.00 ATOM 48 CA ILE 54 -25.078 28.059 -22.838 1.00 0.00 ATOM 49 C ILE 54 -24.059 28.235 -21.699 1.00 0.00 ATOM 49 O ILE 54 -23.642 27.252 -21.090 1.00 0.00 ATOM 49 N ASP 55 -23.724 29.430 -21.468 1.00 0.00 ATOM 49 CA ASP 55 -22.869 29.697 -20.366 1.00 0.00 ATOM 49 C ASP 55 -23.938 29.927 -19.209 1.00 0.00 ATOM 50 O ASP 55 -24.877 30.702 -19.383 1.00 0.00 ATOM 50 N LEU 56 -23.713 29.231 -18.087 1.00 0.00 ATOM 50 CA LEU 56 -24.507 29.356 -16.953 1.00 0.00 ATOM 50 C LEU 56 -23.778 30.205 -16.004 1.00 0.00 ATOM 50 O LEU 56 -24.099 30.220 -14.819 1.00 0.00 ATOM 51 N SER 57 -22.724 30.985 -16.509 1.00 0.00 ATOM 51 CA SER 57 -21.467 31.131 -15.792 1.00 0.00 ATOM 51 C SER 57 -21.483 31.855 -14.453 1.00 0.00 ATOM 51 O SER 57 -20.740 31.488 -13.546 1.00 0.00 ATOM 52 N ARG 58 -22.333 32.810 -14.453 1.00 0.00 ATOM 52 CA ARG 58 -22.935 33.422 -13.346 1.00 0.00 ATOM 52 C ARG 58 -24.198 32.827 -12.722 1.00 0.00 ATOM 52 O ARG 58 -24.644 33.288 -11.675 1.00 0.00 ATOM 53 N VAL 59 -24.787 31.780 -13.360 1.00 0.00 ATOM 53 CA VAL 59 -26.196 31.485 -12.869 1.00 0.00 ATOM 53 C VAL 59 -26.010 30.685 -11.653 1.00 0.00 ATOM 53 O VAL 59 -25.583 29.536 -11.731 1.00 0.00 ATOM 54 N SER 60 -26.370 31.378 -10.521 1.00 0.00 ATOM 54 CA SER 60 -26.297 30.710 -9.227 1.00 0.00 ATOM 54 C SER 60 -27.126 29.506 -8.990 1.00 0.00 ATOM 54 O SER 60 -26.646 28.529 -8.420 1.00 0.00 ATOM 54 N ARG 61 -28.359 29.627 -9.452 1.00 0.00 ATOM 55 CA ARG 61 -29.374 28.736 -8.828 1.00 0.00 ATOM 55 C ARG 61 -30.127 28.000 -9.925 1.00 0.00 ATOM 55 O ARG 61 -30.417 28.581 -10.968 1.00 0.00 ATOM 56 N VAL 62 -30.465 26.666 -9.674 1.00 0.00 ATOM 56 CA VAL 62 -31.164 25.843 -10.535 1.00 0.00 ATOM 56 C VAL 62 -32.074 24.996 -9.509 1.00 0.00 ATOM 56 O VAL 62 -31.600 24.603 -8.446 1.00 0.00 ATOM 56 N ASP 63 -33.258 24.816 -9.956 1.00 0.00 ATOM 57 CA ASP 63 -34.306 23.945 -9.300 1.00 0.00 ATOM 57 C ASP 63 -34.495 22.807 -10.182 1.00 0.00 ATOM 57 O ASP 63 -33.855 22.725 -11.228 1.00 0.00 ATOM 57 N THR 64 -35.412 21.818 -9.827 1.00 0.00 ATOM 57 CA THR 64 -35.777 20.696 -10.556 1.00 0.00 ATOM 58 C THR 64 -36.445 21.041 -11.864 1.00 0.00 ATOM 58 O THR 64 -36.181 20.397 -12.878 1.00 0.00 ATOM 58 N GLY 65 -37.315 22.054 -11.894 1.00 0.00 ATOM 58 CA GLY 65 -37.972 22.482 -13.153 1.00 0.00 ATOM 58 C GLY 65 -36.838 22.895 -14.032 1.00 0.00 ATOM 58 O GLY 65 -36.864 22.637 -15.233 1.00 0.00 ATOM 59 N GLY 66 -35.808 23.558 -13.378 1.00 0.00 ATOM 59 CA GLY 66 -34.737 24.078 -14.201 1.00 0.00 ATOM 59 C GLY 66 -33.961 23.074 -14.967 1.00 0.00 ATOM 59 O GLY 66 -33.697 23.271 -16.152 1.00 0.00 ATOM 59 N LEU 67 -33.634 22.027 -14.246 1.00 0.00 ATOM 59 CA LEU 67 -32.823 20.932 -14.864 1.00 0.00 ATOM 59 C LEU 67 -33.607 20.290 -16.050 1.00 0.00 ATOM 59 O LEU 67 -33.019 19.981 -17.084 1.00 0.00 ATOM 60 N ALA 68 -34.947 20.156 -15.753 1.00 0.00 ATOM 60 CA ALA 68 -35.783 19.583 -16.734 1.00 0.00 ATOM 60 C ALA 68 -35.809 20.461 -17.996 1.00 0.00 ATOM 60 O ALA 68 -35.802 19.939 -19.110 1.00 0.00 ATOM 61 N LEU 69 -35.829 21.748 -17.741 1.00 0.00 ATOM 61 CA LEU 69 -35.824 22.710 -18.842 1.00 0.00 ATOM 61 C LEU 69 -34.558 22.548 -19.807 1.00 0.00 ATOM 61 O LEU 69 -34.714 22.503 -21.025 1.00 0.00 ATOM 62 N LEU 70 -33.410 22.471 -19.094 1.00 0.00 ATOM 62 CA LEU 70 -32.035 22.443 -19.747 1.00 0.00 ATOM 62 C LEU 70 -32.065 21.169 -20.566 1.00 0.00 ATOM 62 O LEU 70 -31.606 21.158 -21.706 1.00 0.00 ATOM 62 N LEU 71 -32.633 20.047 -19.969 1.00 0.00 ATOM 63 CA LEU 71 -32.712 18.794 -20.723 1.00 0.00 ATOM 63 C LEU 71 -33.599 18.945 -21.964 1.00 0.00 ATOM 63 O LEU 71 -33.223 18.502 -23.047 1.00 0.00 ATOM 63 N HIS 72 -34.727 19.560 -21.780 1.00 0.00 ATOM 63 CA HIS 72 -35.631 19.811 -22.890 1.00 0.00 ATOM 64 C HIS 72 -35.052 20.715 -23.951 1.00 0.00 ATOM 64 O HIS 72 -35.254 20.477 -25.140 1.00 0.00 ATOM 64 N LEU 73 -34.290 21.805 -23.488 1.00 0.00 ATOM 65 CA LEU 73 -33.571 22.654 -24.481 1.00 0.00 ATOM 65 C LEU 73 -32.570 21.905 -25.271 1.00 0.00 ATOM 65 O LEU 73 -32.411 22.158 -26.463 1.00 0.00 ATOM 65 N ILE 74 -31.853 20.948 -24.653 1.00 0.00 ATOM 65 CA ILE 74 -30.892 20.056 -25.364 1.00 0.00 ATOM 66 C ILE 74 -31.641 19.284 -26.430 1.00 0.00 ATOM 66 O ILE 74 -31.171 19.182 -27.562 1.00 0.00 ATOM 66 N ASP 75 -32.798 18.741 -26.105 1.00 0.00 ATOM 66 CA ASP 75 -33.560 18.072 -27.118 1.00 0.00 ATOM 66 C ASP 75 -34.080 18.942 -28.372 1.00 0.00 ATOM 67 O ASP 75 -34.013 18.484 -29.511 1.00 0.00 ATOM 67 N LEU 76 -34.540 20.109 -28.045 1.00 0.00 ATOM 67 CA LEU 76 -35.050 21.062 -29.108 1.00 0.00 ATOM 67 C LEU 76 -33.941 21.421 -30.016 1.00 0.00 ATOM 67 O LEU 76 -34.121 21.440 -31.232 1.00 0.00 ATOM 68 N ALA 77 -32.753 21.703 -29.357 1.00 0.00 ATOM 68 CA ALA 77 -31.639 22.087 -30.147 1.00 0.00 ATOM 68 C ALA 77 -31.208 20.957 -31.094 1.00 0.00 ATOM 68 O ALA 77 -30.943 21.204 -32.269 1.00 0.00 ATOM 69 N LYS 78 -31.149 19.732 -30.582 1.00 0.00 ATOM 69 CA LYS 78 -30.743 18.622 -31.372 1.00 0.00 ATOM 69 C LYS 78 -31.740 18.365 -32.510 1.00 0.00 ATOM 69 O LYS 78 -31.333 18.053 -33.627 1.00 0.00 ATOM 70 N LYS 79 -33.065 18.506 -32.222 1.00 0.00 ATOM 70 CA LYS 79 -34.113 18.270 -33.238 1.00 0.00 ATOM 70 C LYS 79 -33.893 19.255 -34.397 1.00 0.00 ATOM 70 O LYS 79 -34.047 18.885 -35.559 1.00 0.00 ATOM 71 N GLN 80 -33.532 20.480 -34.054 1.00 0.00 ATOM 71 CA GLN 80 -33.234 21.488 -35.071 1.00 0.00 ATOM 71 C GLN 80 -32.086 21.080 -35.952 1.00 0.00 ATOM 71 O GLN 80 -32.131 21.292 -37.162 1.00 0.00 ATOM 72 N GLY 81 -31.082 20.494 -35.306 1.00 0.00 ATOM 72 CA GLY 81 -29.930 19.930 -35.960 1.00 0.00 ATOM 72 C GLY 81 -28.754 20.752 -35.446 1.00 0.00 ATOM 72 O GLY 81 -27.616 20.516 -35.845 1.00 0.00 ATOM 72 N ASN 82 -28.894 21.781 -34.518 1.00 0.00 ATOM 72 CA ASN 82 -27.892 22.444 -33.616 1.00 0.00 ATOM 72 C ASN 82 -27.298 21.584 -32.383 1.00 0.00 ATOM 72 O ASN 82 -27.915 20.608 -31.959 1.00 0.00 ATOM 73 N ASN 83 -26.165 21.973 -31.871 1.00 0.00 ATOM 73 CA ASN 83 -25.565 21.464 -30.588 1.00 0.00 ATOM 73 C ASN 83 -25.724 22.200 -29.371 1.00 0.00 ATOM 73 O ASN 83 -25.403 23.385 -29.322 1.00 0.00 ATOM 74 N VAL 84 -26.234 21.625 -28.185 1.00 0.00 ATOM 74 CA VAL 84 -26.149 22.569 -26.996 1.00 0.00 ATOM 74 C VAL 84 -25.226 22.214 -25.842 1.00 0.00 ATOM 74 O VAL 84 -25.334 21.128 -25.278 1.00 0.00 ATOM 75 N THR 85 -24.383 23.195 -25.587 1.00 0.00 ATOM 75 CA THR 85 -23.380 23.071 -24.643 1.00 0.00 ATOM 75 C THR 85 -23.550 23.836 -23.446 1.00 0.00 ATOM 75 O THR 85 -24.197 24.882 -23.470 1.00 0.00 ATOM 76 N LEU 86 -23.010 23.413 -22.348 1.00 0.00 ATOM 76 CA LEU 86 -23.039 24.088 -21.098 1.00 0.00 ATOM 76 C LEU 86 -21.667 24.391 -20.857 1.00 0.00 ATOM 76 O LEU 86 -20.816 23.508 -20.944 1.00 0.00 ATOM 76 N GLN 87 -21.388 25.611 -20.545 1.00 0.00 ATOM 77 CA GLN 87 -20.065 26.083 -20.212 1.00 0.00 ATOM 77 C GLN 87 -19.942 27.077 -18.975 1.00 0.00 ATOM 77 O GLN 87 -20.845 27.877 -18.735 1.00 0.00 ATOM 77 N GLY 88 -18.766 26.892 -18.318 1.00 0.00 ATOM 78 CA GLY 88 -18.370 27.746 -17.183 1.00 0.00 ATOM 78 C GLY 88 -19.295 27.682 -16.001 1.00 0.00 ATOM 78 O GLY 88 -19.626 28.715 -15.421 1.00 0.00 ATOM 78 N VAL 89 -19.698 26.388 -15.661 1.00 0.00 ATOM 78 CA VAL 89 -20.629 26.099 -14.605 1.00 0.00 ATOM 78 C VAL 89 -19.893 26.467 -13.224 1.00 0.00 ATOM 78 O VAL 89 -18.686 26.275 -13.101 1.00 0.00 ATOM 79 N ASN 90 -20.681 26.947 -12.317 1.00 0.00 ATOM 79 CA ASN 90 -20.431 27.236 -10.942 1.00 0.00 ATOM 79 C ASN 90 -20.466 25.903 -10.219 1.00 0.00 ATOM 79 O ASN 90 -21.105 24.963 -10.689 1.00 0.00 ATOM 80 N ASP 91 -19.747 25.937 -9.078 1.00 0.00 ATOM 80 CA ASP 91 -19.643 24.658 -8.377 1.00 0.00 ATOM 80 C ASP 91 -20.950 24.046 -7.891 1.00 0.00 ATOM 80 O ASP 91 -21.150 22.840 -8.016 1.00 0.00 ATOM 81 N LYS 92 -21.799 24.946 -7.350 1.00 0.00 ATOM 81 CA LYS 92 -23.054 24.477 -6.965 1.00 0.00 ATOM 81 C LYS 92 -23.914 23.936 -8.085 1.00 0.00 ATOM 81 O LYS 92 -24.541 22.891 -7.932 1.00 0.00 ATOM 82 N VAL 93 -23.969 24.629 -9.264 1.00 0.00 ATOM 82 CA VAL 93 -24.732 24.149 -10.415 1.00 0.00 ATOM 82 C VAL 93 -24.082 22.749 -10.873 1.00 0.00 ATOM 82 O VAL 93 -24.803 21.816 -11.214 1.00 0.00 ATOM 82 N TYR 94 -22.779 22.696 -10.844 1.00 0.00 ATOM 82 CA TYR 94 -22.138 21.396 -11.279 1.00 0.00 ATOM 83 C TYR 94 -22.472 20.259 -10.356 1.00 0.00 ATOM 83 O TYR 94 -22.708 19.143 -10.814 1.00 0.00 ATOM 84 N THR 95 -22.521 20.465 -9.008 1.00 0.00 ATOM 84 CA THR 95 -22.864 19.458 -8.058 1.00 0.00 ATOM 84 C THR 95 -24.235 18.996 -8.340 1.00 0.00 ATOM 84 O THR 95 -24.504 17.797 -8.291 1.00 0.00 ATOM 84 N LEU 96 -25.135 19.934 -8.651 1.00 0.00 ATOM 85 CA LEU 96 -26.531 19.564 -8.945 1.00 0.00 ATOM 85 C LEU 96 -26.663 18.646 -10.201 1.00 0.00 ATOM 85 O LEU 96 -27.395 17.660 -10.170 1.00 0.00 ATOM 85 N ALA 97 -25.935 19.023 -11.247 1.00 0.00 ATOM 85 CA ALA 97 -25.977 18.303 -12.506 1.00 0.00 ATOM 86 C ALA 97 -25.425 16.806 -12.240 1.00 0.00 ATOM 86 O ALA 97 -26.000 15.839 -12.736 1.00 0.00 ATOM 86 N LYS 98 -24.306 16.810 -11.431 1.00 0.00 ATOM 86 CA LYS 98 -23.738 15.542 -11.119 1.00 0.00 ATOM 86 C LYS 98 -24.589 14.629 -10.345 1.00 0.00 ATOM 86 O LYS 98 -24.655 13.440 -10.652 1.00 0.00 ATOM 87 N LEU 99 -25.259 15.258 -9.304 1.00 0.00 ATOM 87 CA LEU 99 -26.178 14.469 -8.433 1.00 0.00 ATOM 87 C LEU 99 -27.342 13.852 -9.309 1.00 0.00 ATOM 87 O LEU 99 -27.694 12.688 -9.134 1.00 0.00 ATOM 88 N TYR 100 -27.856 14.714 -10.215 1.00 0.00 ATOM 88 CA TYR 100 -28.911 14.439 -11.138 1.00 0.00 ATOM 88 C TYR 100 -28.716 13.382 -12.274 1.00 0.00 ATOM 88 O TYR 100 -29.620 12.595 -12.545 1.00 0.00 ATOM 89 N ASN 101 -27.444 13.445 -12.896 1.00 0.00 ATOM 89 CA ASN 101 -26.998 12.723 -14.162 1.00 0.00 ATOM 89 C ASN 101 -27.094 13.488 -15.440 1.00 0.00 ATOM 89 O ASN 101 -26.934 12.917 -16.516 1.00 0.00 ATOM 90 N LEU 102 -27.345 14.742 -15.255 1.00 0.00 ATOM 90 CA LEU 102 -27.314 15.825 -16.293 1.00 0.00 ATOM 90 C LEU 102 -25.915 16.159 -17.039 1.00 0.00 ATOM 90 O LEU 102 -25.882 16.278 -18.263 1.00 0.00 ATOM 91 N PRO 103 -24.735 16.313 -16.302 1.00 0.00 ATOM 91 CA PRO 103 -23.468 16.370 -17.157 1.00 0.00 ATOM 91 C PRO 103 -23.467 14.995 -17.859 1.00 0.00 ATOM 91 O PRO 103 -22.781 14.815 -18.863 1.00 0.00 ATOM 92 N ALA 104 -24.241 13.894 -17.402 1.00 0.00 ATOM 92 CA ALA 104 -24.233 12.707 -18.350 1.00 0.00 ATOM 92 C ALA 104 -24.901 12.989 -19.624 1.00 0.00 ATOM 92 O ALA 104 -24.395 12.617 -20.680 1.00 0.00 ATOM 92 N ASP 105 -25.985 13.616 -19.598 1.00 0.00 ATOM 92 CA ASP 105 -26.585 14.031 -20.919 1.00 0.00 ATOM 92 C ASP 105 -26.149 15.392 -21.627 1.00 0.00 ATOM 93 O ASP 105 -25.642 15.369 -22.747 1.00 0.00 ATOM 93 N VAL 106 -26.315 16.623 -21.023 1.00 0.00 ATOM 93 CA VAL 106 -26.091 17.877 -21.738 1.00 0.00 ATOM 93 C VAL 106 -24.707 18.225 -21.860 1.00 0.00 ATOM 93 O VAL 106 -23.900 17.854 -21.009 1.00 0.00 ATOM 94 N LEU 107 -24.208 18.998 -22.928 1.00 0.00 ATOM 94 CA LEU 107 -22.780 18.744 -23.178 1.00 0.00 ATOM 94 C LEU 107 -21.860 19.783 -22.733 1.00 0.00 ATOM 94 O LEU 107 -22.159 20.968 -22.866 1.00 0.00 ATOM 95 N PRO 108 -20.674 19.336 -22.180 1.00 0.00 ATOM 95 CA PRO 108 -19.697 20.284 -21.701 1.00 0.00 ATOM 95 C PRO 108 -19.002 21.037 -22.722 1.00 0.00 ATOM 95 O PRO 108 -18.731 20.509 -23.800 1.00 0.00 ATOM 96 N ARG 109 -18.724 22.335 -22.286 1.00 0.00 ATOM 96 CA ARG 109 -17.434 22.951 -22.806 1.00 0.00 ATOM 96 C ARG 109 -17.209 24.146 -21.912 1.00 0.00 ATOM 96 O ARG 109 -18.024 24.395 -21.006 1.00 0.00 TER END