####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 107 ( 428), selected 107 , name R0992TS433_2 # Molecule2: number of CA atoms 107 ( 820), selected 107 , name R0992.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap R0992TS433_2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 107 4 - 110 3.14 3.14 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 104 4 - 107 1.91 3.24 LCS_AVERAGE: 94.63 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 38 5 - 42 0.98 3.36 LCS_AVERAGE: 20.69 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 107 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT D 4 D 4 8 104 107 3 5 14 17 29 66 92 98 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT K 5 K 5 38 104 107 8 43 66 80 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT P 6 P 6 38 104 107 12 59 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT G 7 G 7 38 104 107 36 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT P 8 P 8 38 104 107 36 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT H 9 H 9 38 104 107 36 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT G 10 G 10 38 104 107 36 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT G 11 G 11 38 104 107 36 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT H 12 H 12 38 104 107 36 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT I 13 I 13 38 104 107 36 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT Q 14 Q 14 38 104 107 33 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT M 15 M 15 38 104 107 4 59 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT P 16 P 16 38 104 107 3 6 17 61 86 92 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT G 17 G 17 38 104 107 3 18 46 78 87 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT A 18 A 18 38 104 107 4 45 72 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT F 19 F 19 38 104 107 10 51 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT H 20 H 20 38 104 107 36 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT T 21 T 21 38 104 107 36 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT E 22 E 22 38 104 107 36 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT I 23 I 23 38 104 107 14 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT T 24 T 24 38 104 107 36 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT V 25 V 25 38 104 107 36 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT D 26 D 26 38 104 107 36 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT K 27 K 27 38 104 107 30 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT D 28 D 28 38 104 107 30 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT Q 29 Q 29 38 104 107 33 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT S 30 S 30 38 104 107 36 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT V 31 V 31 38 104 107 36 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT H 32 H 32 38 104 107 36 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT V 33 V 33 38 104 107 36 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT Y 34 Y 34 38 104 107 36 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT L 35 L 35 38 104 107 36 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT L 36 L 36 38 104 107 36 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT D 37 D 37 38 104 107 36 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT M 38 M 38 38 104 107 36 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT N 39 N 39 38 104 107 24 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT F 40 F 40 38 104 107 13 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT A 41 A 41 38 104 107 5 48 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT N 42 N 42 38 104 107 4 55 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT P 43 P 43 26 104 107 3 4 18 65 85 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT T 44 T 44 5 104 107 3 5 14 72 87 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT I 45 I 45 10 104 107 3 56 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT K 46 K 46 10 104 107 3 14 49 73 87 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT D 47 D 47 10 104 107 3 42 69 80 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT S 48 S 48 10 104 107 18 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT S 49 S 49 10 104 107 18 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT V 50 V 50 10 104 107 18 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT A 51 A 51 10 104 107 15 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT V 52 V 52 10 104 107 36 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT T 53 T 53 10 104 107 36 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT A 54 A 54 10 104 107 26 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT K 55 K 55 10 104 107 9 54 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT N 56 N 56 6 104 107 5 25 56 80 87 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT K 57 K 57 6 104 107 5 25 59 77 86 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT K 58 K 58 22 104 107 3 3 23 71 85 91 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT S 59 S 59 23 104 107 14 57 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT E 60 E 60 23 104 107 30 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT I 61 I 61 23 104 107 22 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT K 62 K 62 23 104 107 34 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT Y 63 Y 63 23 104 107 36 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT T 64 T 64 23 104 107 36 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT C 65 C 65 23 104 107 36 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT S 66 S 66 23 104 107 36 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT V 67 V 67 23 104 107 21 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT M 68 M 68 23 104 107 21 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT G 69 G 69 23 104 107 20 61 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT N 70 N 70 23 104 107 6 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT D 71 D 71 23 104 107 17 57 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT H 72 H 72 23 104 107 6 40 69 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT Y 73 Y 73 23 104 107 33 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT H 74 H 74 23 104 107 36 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT C 75 C 75 23 104 107 36 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT I 76 I 76 23 104 107 36 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT P 77 P 77 23 104 107 36 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT N 78 N 78 23 104 107 36 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT G 79 G 79 23 104 107 11 34 67 80 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT K 80 K 80 23 104 107 4 20 43 76 86 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT V 81 V 81 23 104 107 4 21 53 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT P 82 P 82 5 104 107 2 8 29 49 69 91 97 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT A 83 A 83 10 104 107 4 27 66 81 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT K 84 K 84 11 104 107 8 42 67 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT T 85 T 85 11 104 107 8 49 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT N 86 N 86 11 104 107 30 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT L 87 L 87 11 104 107 33 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT I 88 I 88 11 104 107 30 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT V 89 V 89 11 104 107 36 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT Q 90 Q 90 11 104 107 29 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT A 91 A 91 11 104 107 36 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT T 92 T 92 11 104 107 36 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT R 93 R 93 11 104 107 5 22 63 79 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT E 94 E 94 11 104 107 10 57 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT K 95 K 95 3 104 107 3 18 31 62 87 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT A 96 A 96 4 104 107 3 4 23 33 67 90 97 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT V 97 V 97 4 104 107 3 9 66 81 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT G 98 G 98 4 104 107 3 4 23 56 80 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT N 99 N 99 6 104 107 3 8 23 78 87 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT E 100 E 100 6 104 107 6 40 73 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT A 101 A 101 6 104 107 33 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT V 102 V 102 6 104 107 20 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT Y 103 Y 103 6 104 107 25 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT K 104 K 104 6 104 107 20 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT L 105 L 105 6 104 107 3 21 70 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT P 106 P 106 4 104 107 4 33 70 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 LCS_GDT L 107 L 107 4 104 107 4 4 8 13 16 22 38 49 70 98 101 103 104 104 104 105 105 105 106 106 LCS_GDT P 108 P 108 4 6 107 4 4 6 8 11 16 29 31 37 45 55 74 86 99 103 105 105 105 106 106 LCS_GDT A 109 A 109 4 6 107 4 4 5 8 11 16 18 20 23 31 52 65 73 81 88 95 99 104 106 106 LCS_GDT F 110 F 110 4 6 107 4 4 5 8 10 16 18 20 23 25 28 32 39 53 61 69 74 102 103 105 LCS_AVERAGE LCS_A: 71.77 ( 20.69 94.63 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 36 62 74 82 88 93 99 102 102 103 103 103 104 104 104 105 105 105 106 106 GDT PERCENT_AT 33.64 57.94 69.16 76.64 82.24 86.92 92.52 95.33 95.33 96.26 96.26 96.26 97.20 97.20 97.20 98.13 98.13 98.13 99.07 99.07 GDT RMS_LOCAL 0.34 0.61 0.78 0.97 1.13 1.30 1.51 1.66 1.66 1.74 1.74 1.74 1.91 1.91 1.91 2.23 2.23 2.23 2.65 2.65 GDT RMS_ALL_AT 3.27 3.27 3.28 3.24 3.24 3.25 3.25 3.25 3.25 3.27 3.27 3.27 3.24 3.24 3.24 3.20 3.20 3.20 3.16 3.16 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA D 4 D 4 5.562 4 0.296 0.296 7.084 0.000 0.000 - LGA K 5 K 5 2.374 5 0.087 0.087 2.933 41.818 18.586 - LGA P 6 P 6 1.430 3 0.028 0.028 1.891 65.909 37.662 - LGA G 7 G 7 0.532 0 0.024 0.024 0.700 86.364 86.364 - LGA P 8 P 8 0.338 3 0.031 0.031 0.343 100.000 57.143 - LGA H 9 H 9 0.281 6 0.052 0.052 0.433 100.000 40.000 - LGA G 10 G 10 0.816 0 0.042 0.042 0.881 81.818 81.818 - LGA G 11 G 11 0.854 0 0.055 0.055 0.854 81.818 81.818 - LGA H 12 H 12 0.562 6 0.079 0.079 0.774 90.909 36.364 - LGA I 13 I 13 0.389 4 0.085 0.085 1.049 86.818 43.409 - LGA Q 14 Q 14 0.683 5 0.086 0.086 0.752 81.818 36.364 - LGA M 15 M 15 1.339 4 0.136 0.136 2.859 49.091 24.545 - LGA P 16 P 16 3.283 3 0.716 0.716 3.499 22.727 12.987 - LGA G 17 G 17 2.787 0 0.034 0.034 3.355 27.727 27.727 - LGA A 18 A 18 1.979 1 0.100 0.100 2.126 51.364 41.091 - LGA F 19 F 19 1.504 7 0.178 0.178 1.504 65.909 23.967 - LGA H 20 H 20 0.456 6 0.066 0.066 0.781 90.909 36.364 - LGA T 21 T 21 0.387 3 0.085 0.085 0.922 90.909 51.948 - LGA E 22 E 22 0.461 5 0.052 0.052 0.817 90.909 40.404 - LGA I 23 I 23 1.127 4 0.119 0.119 1.275 69.545 34.773 - LGA T 24 T 24 1.006 3 0.076 0.076 1.141 73.636 42.078 - LGA V 25 V 25 0.850 3 0.045 0.045 1.006 77.727 44.416 - LGA D 26 D 26 0.497 4 0.050 0.050 0.729 95.455 47.727 - LGA K 27 K 27 0.703 5 0.088 0.088 1.246 82.273 36.566 - LGA D 28 D 28 0.385 4 0.086 0.086 0.470 100.000 50.000 - LGA Q 29 Q 29 0.606 5 0.064 0.064 0.835 81.818 36.364 - LGA S 30 S 30 0.729 2 0.018 0.018 0.829 81.818 54.545 - LGA V 31 V 31 0.910 3 0.047 0.047 0.944 81.818 46.753 - LGA H 32 H 32 0.859 6 0.020 0.020 0.913 81.818 32.727 - LGA V 33 V 33 0.465 3 0.063 0.063 0.635 90.909 51.948 - LGA Y 34 Y 34 0.503 8 0.042 0.042 0.529 90.909 30.303 - LGA L 35 L 35 0.388 4 0.165 0.165 1.307 86.818 43.409 - LGA L 36 L 36 0.551 4 0.046 0.046 0.577 86.364 43.182 - LGA D 37 D 37 0.434 4 0.082 0.082 0.488 100.000 50.000 - LGA M 38 M 38 0.498 4 0.050 0.050 0.509 95.455 47.727 - LGA N 39 N 39 0.631 4 0.045 0.045 0.878 86.364 43.182 - LGA F 40 F 40 0.853 7 0.079 0.079 1.316 73.636 26.777 - LGA A 41 A 41 1.427 1 0.087 0.087 1.427 82.727 66.182 - LGA N 42 N 42 1.352 4 0.234 0.234 3.011 62.273 31.136 - LGA P 43 P 43 3.274 3 0.057 0.057 3.274 55.000 31.429 - LGA T 44 T 44 3.055 3 0.087 0.087 3.855 18.636 10.649 - LGA I 45 I 45 1.492 4 0.046 0.046 1.742 54.545 27.273 - LGA K 46 K 46 3.233 5 0.653 0.653 4.957 19.091 8.485 - LGA D 47 D 47 2.526 4 0.156 0.156 2.526 35.455 17.727 - LGA S 48 S 48 1.023 2 0.070 0.070 1.681 58.182 38.788 - LGA S 49 S 49 0.957 2 0.054 0.054 0.957 81.818 54.545 - LGA V 50 V 50 0.769 3 0.104 0.104 0.915 81.818 46.753 - LGA A 51 A 51 0.792 1 0.040 0.040 0.813 86.364 69.091 - LGA V 52 V 52 0.086 3 0.068 0.068 0.438 100.000 57.143 - LGA T 53 T 53 0.507 3 0.017 0.017 0.507 95.455 54.545 - LGA A 54 A 54 0.760 1 0.100 0.100 0.760 81.818 65.455 - LGA K 55 K 55 1.490 5 0.055 0.055 2.455 59.091 26.263 - LGA N 56 N 56 2.847 4 0.275 0.275 4.261 25.455 12.727 - LGA K 57 K 57 3.421 5 0.417 0.417 3.421 25.455 11.313 - LGA K 58 K 58 3.894 5 0.311 0.311 3.909 19.545 8.687 - LGA S 59 S 59 1.586 2 0.117 0.117 1.757 66.364 44.242 - LGA E 60 E 60 0.649 5 0.102 0.102 0.953 81.818 36.364 - LGA I 61 I 61 0.746 4 0.061 0.061 0.746 81.818 40.909 - LGA K 62 K 62 0.531 5 0.046 0.046 0.592 90.909 40.404 - LGA Y 63 Y 63 0.386 8 0.039 0.039 0.435 100.000 33.333 - LGA T 64 T 64 0.494 3 0.046 0.046 0.544 90.909 51.948 - LGA C 65 C 65 0.409 2 0.084 0.084 0.769 90.909 60.606 - LGA S 66 S 66 0.241 2 0.077 0.077 0.428 100.000 66.667 - LGA V 67 V 67 0.964 3 0.087 0.087 0.964 81.818 46.753 - LGA M 68 M 68 0.986 4 0.063 0.063 1.111 77.727 38.864 - LGA G 69 G 69 0.974 0 0.674 0.674 3.311 61.818 61.818 - LGA N 70 N 70 1.075 4 0.034 0.034 1.357 65.455 32.727 - LGA D 71 D 71 1.419 4 0.093 0.093 2.343 55.000 27.500 - LGA H 72 H 72 1.954 6 0.152 0.152 1.954 58.182 23.273 - LGA Y 73 Y 73 0.475 8 0.039 0.039 0.893 90.909 30.303 - LGA H 74 H 74 0.523 6 0.018 0.018 0.659 86.364 34.545 - LGA C 75 C 75 0.566 2 0.019 0.019 0.612 81.818 54.545 - LGA I 76 I 76 0.527 4 0.043 0.043 0.535 86.364 43.182 - LGA P 77 P 77 0.483 3 0.045 0.045 0.586 86.364 49.351 - LGA N 78 N 78 0.548 4 0.290 0.290 1.098 82.273 41.136 - LGA G 79 G 79 2.367 0 0.172 0.172 2.367 41.364 41.364 - LGA K 80 K 80 3.264 5 0.267 0.267 3.264 34.545 15.354 - LGA V 81 V 81 2.038 3 0.124 0.124 4.389 26.364 15.065 - LGA P 82 P 82 4.571 3 0.047 0.047 4.868 5.909 3.377 - LGA A 83 A 83 2.696 1 0.607 0.607 2.923 30.000 24.000 - LGA K 84 K 84 2.176 5 0.092 0.092 2.176 51.364 22.828 - LGA T 85 T 85 1.422 3 0.080 0.080 1.801 65.909 37.662 - LGA N 86 N 86 0.830 4 0.035 0.035 0.889 81.818 40.909 - LGA L 87 L 87 0.616 4 0.067 0.067 0.884 81.818 40.909 - LGA I 88 I 88 0.623 4 0.048 0.048 0.623 86.364 43.182 - LGA V 89 V 89 0.264 3 0.071 0.071 0.313 100.000 57.143 - LGA Q 90 Q 90 0.467 5 0.145 0.145 1.364 86.818 38.586 - LGA A 91 A 91 0.416 1 0.064 0.064 0.728 90.909 72.727 - LGA T 92 T 92 0.603 3 0.046 0.046 1.023 82.273 47.013 - LGA R 93 R 93 2.411 7 0.154 0.154 3.051 36.364 13.223 - LGA E 94 E 94 1.418 5 0.357 0.357 1.934 58.182 25.859 - LGA K 95 K 95 3.050 5 0.064 0.064 3.050 30.455 13.535 - LGA A 96 A 96 4.360 1 0.333 0.333 5.936 9.545 7.636 - LGA V 97 V 97 2.030 3 0.068 0.068 2.927 35.455 20.260 - LGA G 98 G 98 3.668 0 0.090 0.090 3.668 29.545 29.545 - LGA N 99 N 99 2.921 4 0.089 0.089 3.053 30.455 15.227 - LGA E 100 E 100 1.689 5 0.081 0.081 2.154 51.364 22.828 - LGA A 101 A 101 0.428 1 0.067 0.067 0.560 86.364 69.091 - LGA V 102 V 102 0.819 3 0.073 0.073 0.965 81.818 46.753 - LGA Y 103 Y 103 0.846 8 0.048 0.048 0.972 81.818 27.273 - LGA K 104 K 104 1.102 5 0.231 0.231 1.228 69.545 30.909 - LGA L 105 L 105 1.993 4 0.155 0.155 3.556 35.000 17.500 - LGA P 106 P 106 2.235 3 0.104 0.104 5.956 19.545 11.169 - LGA L 107 L 107 8.343 4 0.223 0.223 10.607 0.000 0.000 - LGA P 108 P 108 12.103 3 0.106 0.106 14.058 0.000 0.000 - LGA A 109 A 109 15.638 1 0.091 0.091 16.900 0.000 0.000 - LGA F 110 F 110 18.971 7 0.555 0.555 22.686 0.000 0.000 - # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 107 428 428 100.00 820 428 52.20 107 0 SUMMARY(RMSD_GDC): 3.142 3.246 3.246 65.641 36.342 0.000 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 107 107 4.0 102 1.66 82.009 87.786 5.797 LGA_LOCAL RMSD: 1.660 Number of atoms: 102 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 3.253 Number of assigned atoms: 107 Std_ASGN_ATOMS RMSD: 3.142 Standard rmsd on all 107 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.359179 * X + 0.771419 * Y + 0.525265 * Z + 14.007567 Y_new = -0.122453 * X + -0.519003 * Y + 0.845956 * Z + 51.192787 Z_new = 0.925200 * X + -0.368170 * Y + -0.091952 * Z + 23.810320 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.328567 -1.181563 -1.815545 [DEG: -18.8255 -67.6986 -104.0231 ] ZXZ: 2.585938 1.662879 1.949521 [DEG: 148.1633 95.2759 111.6993 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: R0992TS433_2 REMARK 2: R0992.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap R0992TS433_2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 107 107 4.0 102 1.66 87.786 3.14 REMARK ---------------------------------------------------------- MOLECULE R0992TS433_2 PFRMAT TS TARGET R0992 MODEL 2 PARENT N/A ATOM 42 N ASP 4 14.008 51.193 23.810 1.00 0.00 ATOM 43 CA ASP 4 15.170 50.593 23.159 1.00 0.00 ATOM 44 C ASP 4 14.855 50.445 21.665 1.00 0.00 ATOM 45 O ASP 4 14.762 49.331 21.144 1.00 0.00 ATOM 54 N LYS 5 14.718 51.609 21.017 1.00 0.00 ATOM 55 CA LYS 5 14.286 51.813 19.623 1.00 0.00 ATOM 56 C LYS 5 12.791 51.461 19.465 1.00 0.00 ATOM 57 O LYS 5 12.245 50.705 20.272 1.00 0.00 ATOM 76 N PRO 6 12.091 52.029 18.465 1.00 0.00 ATOM 77 CA PRO 6 10.707 51.707 18.135 1.00 0.00 ATOM 78 C PRO 6 10.523 50.230 17.825 1.00 0.00 ATOM 79 O PRO 6 11.404 49.590 17.244 1.00 0.00 ATOM 90 N GLY 7 9.361 49.706 18.185 1.00 0.00 ATOM 91 CA GLY 7 9.031 48.313 17.959 1.00 0.00 ATOM 92 C GLY 7 8.489 48.049 16.569 1.00 0.00 ATOM 93 O GLY 7 8.287 48.987 15.797 1.00 0.00 ATOM 97 N PRO 8 8.141 46.788 16.260 1.00 0.00 ATOM 98 CA PRO 8 7.667 46.320 14.973 1.00 0.00 ATOM 99 C PRO 8 6.320 46.892 14.564 1.00 0.00 ATOM 100 O PRO 8 5.977 46.848 13.383 1.00 0.00 ATOM 111 N HIS 9 5.554 47.449 15.509 1.00 0.00 ATOM 112 CA HIS 9 4.270 48.008 15.150 1.00 0.00 ATOM 113 C HIS 9 4.285 49.516 15.440 1.00 0.00 ATOM 114 O HIS 9 3.240 50.169 15.442 1.00 0.00 ATOM 128 N GLY 10 5.489 50.065 15.678 1.00 0.00 ATOM 129 CA GLY 10 5.689 51.492 15.929 1.00 0.00 ATOM 130 C GLY 10 5.608 51.993 17.387 1.00 0.00 ATOM 131 O GLY 10 5.646 53.208 17.598 1.00 0.00 ATOM 135 N GLY 11 5.477 51.109 18.388 1.00 0.00 ATOM 136 CA GLY 11 5.386 51.599 19.774 1.00 0.00 ATOM 137 C GLY 11 6.754 51.642 20.444 1.00 0.00 ATOM 138 O GLY 11 7.763 51.294 19.832 1.00 0.00 ATOM 142 N HIS 12 6.813 52.040 21.714 1.00 0.00 ATOM 143 CA HIS 12 8.106 52.062 22.401 1.00 0.00 ATOM 144 C HIS 12 8.382 50.682 22.965 1.00 0.00 ATOM 145 O HIS 12 7.445 50.082 23.482 1.00 0.00 ATOM 159 N ILE 13 9.634 50.195 22.946 1.00 0.00 ATOM 160 CA ILE 13 9.918 48.892 23.576 1.00 0.00 ATOM 161 C ILE 13 10.926 48.887 24.698 1.00 0.00 ATOM 162 O ILE 13 12.033 49.399 24.567 1.00 0.00 ATOM 178 N GLN 14 10.552 48.256 25.797 1.00 0.00 ATOM 179 CA GLN 14 11.499 48.066 26.884 1.00 0.00 ATOM 180 C GLN 14 11.808 46.575 26.917 1.00 0.00 ATOM 181 O GLN 14 10.918 45.742 26.686 1.00 0.00 ATOM 195 N MET 15 13.059 46.223 27.191 1.00 0.00 ATOM 196 CA MET 15 13.443 44.810 27.206 1.00 0.00 ATOM 197 C MET 15 14.141 44.314 28.477 1.00 0.00 ATOM 198 O MET 15 15.299 43.899 28.414 1.00 0.00 ATOM 212 N PRO 16 13.494 44.378 29.654 1.00 0.00 ATOM 213 CA PRO 16 14.034 43.924 30.916 1.00 0.00 ATOM 214 C PRO 16 14.069 42.407 30.920 1.00 0.00 ATOM 215 O PRO 16 13.256 41.768 30.230 1.00 0.00 ATOM 226 N GLY 17 14.947 41.811 31.719 1.00 0.00 ATOM 227 CA GLY 17 14.914 40.365 31.869 1.00 0.00 ATOM 228 C GLY 17 15.055 39.701 30.509 1.00 0.00 ATOM 229 O GLY 17 16.038 39.915 29.800 1.00 0.00 ATOM 233 N ALA 18 14.076 38.868 30.175 1.00 0.00 ATOM 234 CA ALA 18 14.064 38.160 28.910 1.00 0.00 ATOM 235 C ALA 18 12.654 38.164 28.319 1.00 0.00 ATOM 236 O ALA 18 12.170 37.138 27.834 1.00 0.00 ATOM 243 N PHE 19 12.002 39.327 28.355 1.00 0.00 ATOM 244 CA PHE 19 10.650 39.470 27.796 1.00 0.00 ATOM 245 C PHE 19 10.425 40.908 27.332 1.00 0.00 ATOM 246 O PHE 19 10.739 41.834 28.067 1.00 0.00 ATOM 263 N HIS 20 9.912 41.123 26.115 1.00 0.00 ATOM 264 CA HIS 20 9.751 42.503 25.651 1.00 0.00 ATOM 265 C HIS 20 8.305 43.001 25.705 1.00 0.00 ATOM 266 O HIS 20 7.360 42.256 25.427 1.00 0.00 ATOM 280 N THR 21 8.141 44.302 25.972 1.00 0.00 ATOM 281 CA THR 21 6.801 44.905 25.895 1.00 0.00 ATOM 282 C THR 21 6.809 46.167 25.030 1.00 0.00 ATOM 283 O THR 21 7.671 47.030 25.206 1.00 0.00 ATOM 294 N GLU 22 5.844 46.249 24.090 1.00 0.00 ATOM 295 CA GLU 22 5.703 47.393 23.181 1.00 0.00 ATOM 296 C GLU 22 4.459 48.244 23.515 1.00 0.00 ATOM 297 O GLU 22 3.349 47.704 23.596 1.00 0.00 ATOM 309 N ILE 23 4.654 49.559 23.736 1.00 0.00 ATOM 310 CA ILE 23 3.544 50.474 24.081 1.00 0.00 ATOM 311 C ILE 23 3.246 51.605 23.068 1.00 0.00 ATOM 312 O ILE 23 4.140 52.378 22.695 1.00 0.00 ATOM 328 N THR 24 1.960 51.724 22.677 1.00 0.00 ATOM 329 CA THR 24 1.463 52.798 21.799 1.00 0.00 ATOM 330 C THR 24 0.252 53.534 22.409 1.00 0.00 ATOM 331 O THR 24 -0.689 52.906 22.883 1.00 0.00 ATOM 342 N VAL 25 0.252 54.868 22.362 1.00 0.00 ATOM 343 CA VAL 25 -0.899 55.628 22.873 1.00 0.00 ATOM 344 C VAL 25 -1.753 56.121 21.695 1.00 0.00 ATOM 345 O VAL 25 -1.222 56.666 20.726 1.00 0.00 ATOM 358 N ASP 26 -3.062 55.853 21.760 1.00 0.00 ATOM 359 CA ASP 26 -4.009 56.194 20.697 1.00 0.00 ATOM 360 C ASP 26 -4.626 57.591 20.871 1.00 0.00 ATOM 361 O ASP 26 -4.416 58.272 21.878 1.00 0.00 ATOM 370 N LYS 27 -5.414 57.992 19.879 1.00 0.00 ATOM 371 CA LYS 27 -6.074 59.294 19.824 1.00 0.00 ATOM 372 C LYS 27 -7.084 59.564 20.945 1.00 0.00 ATOM 373 O LYS 27 -7.395 60.707 21.254 1.00 0.00 ATOM 392 N ASP 28 -7.629 58.516 21.541 1.00 0.00 ATOM 393 CA ASP 28 -8.596 58.689 22.629 1.00 0.00 ATOM 394 C ASP 28 -7.937 58.446 23.985 1.00 0.00 ATOM 395 O ASP 28 -8.606 58.158 24.976 1.00 0.00 ATOM 404 N GLN 29 -6.602 58.517 23.990 1.00 0.00 ATOM 405 CA GLN 29 -5.719 58.286 25.125 1.00 0.00 ATOM 406 C GLN 29 -5.735 56.839 25.608 1.00 0.00 ATOM 407 O GLN 29 -5.152 56.533 26.655 1.00 0.00 ATOM 421 N SER 30 -6.341 55.920 24.852 1.00 0.00 ATOM 422 CA SER 30 -6.227 54.536 25.254 1.00 0.00 ATOM 423 C SER 30 -4.833 54.051 24.916 1.00 0.00 ATOM 424 O SER 30 -4.104 54.700 24.158 1.00 0.00 ATOM 432 N VAL 31 -4.450 52.920 25.493 1.00 0.00 ATOM 433 CA VAL 31 -3.126 52.371 25.282 1.00 0.00 ATOM 434 C VAL 31 -3.150 50.979 24.661 1.00 0.00 ATOM 435 O VAL 31 -3.872 50.086 25.107 1.00 0.00 ATOM 448 N HIS 32 -2.355 50.803 23.617 1.00 0.00 ATOM 449 CA HIS 32 -2.227 49.524 22.952 1.00 0.00 ATOM 450 C HIS 32 -0.947 48.871 23.438 1.00 0.00 ATOM 451 O HIS 32 0.127 49.488 23.429 1.00 0.00 ATOM 465 N VAL 33 -1.071 47.643 23.918 1.00 0.00 ATOM 466 CA VAL 33 0.072 46.934 24.465 1.00 0.00 ATOM 467 C VAL 33 0.302 45.626 23.727 1.00 0.00 ATOM 468 O VAL 33 -0.639 44.864 23.473 1.00 0.00 ATOM 481 N TYR 34 1.551 45.339 23.392 1.00 0.00 ATOM 482 CA TYR 34 1.827 44.076 22.735 1.00 0.00 ATOM 483 C TYR 34 3.072 43.417 23.278 1.00 0.00 ATOM 484 O TYR 34 4.088 44.058 23.565 1.00 0.00 ATOM 502 N LEU 35 2.957 42.125 23.522 1.00 0.00 ATOM 503 CA LEU 35 4.042 41.373 24.106 1.00 0.00 ATOM 504 C LEU 35 4.886 40.758 22.998 1.00 0.00 ATOM 505 O LEU 35 4.342 40.256 22.018 1.00 0.00 ATOM 521 N LEU 36 6.206 40.808 23.154 1.00 0.00 ATOM 522 CA LEU 36 7.154 40.308 22.155 1.00 0.00 ATOM 523 C LEU 36 8.245 39.360 22.674 1.00 0.00 ATOM 524 O LEU 36 8.667 39.413 23.840 1.00 0.00 ATOM 540 N ASP 37 8.707 38.489 21.773 1.00 0.00 ATOM 541 CA ASP 37 9.827 37.601 22.050 1.00 0.00 ATOM 542 C ASP 37 11.136 38.383 22.005 1.00 0.00 ATOM 543 O ASP 37 11.177 39.522 21.540 1.00 0.00 ATOM 552 N MET 38 12.220 37.755 22.443 1.00 0.00 ATOM 553 CA MET 38 13.537 38.401 22.486 1.00 0.00 ATOM 554 C MET 38 14.061 38.770 21.103 1.00 0.00 ATOM 555 O MET 38 14.837 39.709 20.938 1.00 0.00 ATOM 569 N ASN 39 13.622 38.021 20.106 1.00 0.00 ATOM 570 CA ASN 39 13.970 38.252 18.710 1.00 0.00 ATOM 571 C ASN 39 12.887 39.068 17.998 1.00 0.00 ATOM 572 O ASN 39 12.854 39.135 16.770 1.00 0.00 ATOM 583 N PHE 40 11.990 39.670 18.790 1.00 0.00 ATOM 584 CA PHE 40 10.845 40.464 18.347 1.00 0.00 ATOM 585 C PHE 40 9.793 39.658 17.578 1.00 0.00 ATOM 586 O PHE 40 8.929 40.235 16.914 1.00 0.00 ATOM 603 N ALA 41 9.810 38.326 17.705 1.00 0.00 ATOM 604 CA ALA 41 8.752 37.522 17.113 1.00 0.00 ATOM 605 C ALA 41 7.433 37.898 17.760 1.00 0.00 ATOM 606 O ALA 41 7.376 38.216 18.956 1.00 0.00 ATOM 613 N ASN 42 6.372 37.837 16.960 1.00 0.00 ATOM 614 CA ASN 42 5.023 38.223 17.370 1.00 0.00 ATOM 615 C ASN 42 4.133 37.024 17.781 1.00 0.00 ATOM 616 O ASN 42 3.717 36.264 16.906 1.00 0.00 ATOM 627 N PRO 43 3.854 36.791 19.085 1.00 0.00 ATOM 628 CA PRO 43 3.035 35.698 19.595 1.00 0.00 ATOM 629 C PRO 43 1.535 35.931 19.441 1.00 0.00 ATOM 630 O PRO 43 1.072 37.076 19.387 1.00 0.00 ATOM 641 N THR 44 0.766 34.847 19.456 1.00 0.00 ATOM 642 CA THR 44 -0.685 34.952 19.594 1.00 0.00 ATOM 643 C THR 44 -0.910 35.256 21.064 1.00 0.00 ATOM 644 O THR 44 -0.261 34.639 21.908 1.00 0.00 ATOM 655 N ILE 45 -1.779 36.200 21.396 1.00 0.00 ATOM 656 CA ILE 45 -1.905 36.574 22.813 1.00 0.00 ATOM 657 C ILE 45 -3.052 35.935 23.591 1.00 0.00 ATOM 658 O ILE 45 -3.331 36.314 24.729 1.00 0.00 ATOM 674 N LYS 46 -3.676 34.920 23.015 1.00 0.00 ATOM 675 CA LYS 46 -4.762 34.197 23.676 1.00 0.00 ATOM 676 C LYS 46 -4.329 33.502 24.981 1.00 0.00 ATOM 677 O LYS 46 -5.169 33.198 25.829 1.00 0.00 ATOM 696 N ASP 47 -3.023 33.258 25.122 1.00 0.00 ATOM 697 CA ASP 47 -2.437 32.573 26.269 1.00 0.00 ATOM 698 C ASP 47 -1.655 33.482 27.234 1.00 0.00 ATOM 699 O ASP 47 -0.892 32.977 28.060 1.00 0.00 ATOM 708 N SER 48 -1.831 34.806 27.156 1.00 0.00 ATOM 709 CA SER 48 -1.074 35.703 28.050 1.00 0.00 ATOM 710 C SER 48 -1.890 36.894 28.581 1.00 0.00 ATOM 711 O SER 48 -3.030 37.111 28.162 1.00 0.00 ATOM 719 N SER 49 -1.312 37.668 29.520 1.00 0.00 ATOM 720 CA SER 49 -2.059 38.801 30.107 1.00 0.00 ATOM 721 C SER 49 -1.306 40.133 30.195 1.00 0.00 ATOM 722 O SER 49 -0.077 40.163 30.278 1.00 0.00 ATOM 730 N VAL 50 -2.091 41.231 30.194 1.00 0.00 ATOM 731 CA VAL 50 -1.662 42.642 30.342 1.00 0.00 ATOM 732 C VAL 50 -2.488 43.526 31.290 1.00 0.00 ATOM 733 O VAL 50 -3.717 43.449 31.312 1.00 0.00 ATOM 746 N ALA 51 -1.806 44.405 32.041 1.00 0.00 ATOM 747 CA ALA 51 -2.495 45.437 32.831 1.00 0.00 ATOM 748 C ALA 51 -1.699 46.755 32.800 1.00 0.00 ATOM 749 O ALA 51 -0.471 46.754 32.815 1.00 0.00 ATOM 756 N VAL 52 -2.403 47.891 32.763 1.00 0.00 ATOM 757 CA VAL 52 -1.736 49.204 32.722 1.00 0.00 ATOM 758 C VAL 52 -2.206 50.175 33.817 1.00 0.00 ATOM 759 O VAL 52 -3.401 50.263 34.136 1.00 0.00 ATOM 772 N THR 53 -1.221 50.854 34.418 1.00 0.00 ATOM 773 CA THR 53 -1.403 51.908 35.417 1.00 0.00 ATOM 774 C THR 53 -0.581 53.130 35.009 1.00 0.00 ATOM 775 O THR 53 0.557 52.982 34.568 1.00 0.00 ATOM 786 N ALA 54 -1.116 54.338 35.151 1.00 0.00 ATOM 787 CA ALA 54 -0.280 55.496 34.836 1.00 0.00 ATOM 788 C ALA 54 -0.320 56.523 35.958 1.00 0.00 ATOM 789 O ALA 54 -1.360 56.729 36.583 1.00 0.00 ATOM 796 N LYS 55 0.813 57.185 36.211 1.00 0.00 ATOM 797 CA LYS 55 0.836 58.208 37.258 1.00 0.00 ATOM 798 C LYS 55 0.817 59.623 36.685 1.00 0.00 ATOM 799 O LYS 55 1.523 59.933 35.721 1.00 0.00 ATOM 818 N ASN 56 0.073 60.499 37.356 1.00 0.00 ATOM 819 CA ASN 56 -0.090 61.907 36.968 1.00 0.00 ATOM 820 C ASN 56 0.024 62.800 38.199 1.00 0.00 ATOM 821 O ASN 56 -0.906 62.872 39.004 1.00 0.00 ATOM 832 N LYS 57 1.191 63.414 38.402 1.00 0.00 ATOM 833 CA LYS 57 1.431 64.214 39.611 1.00 0.00 ATOM 834 C LYS 57 1.163 63.369 40.858 1.00 0.00 ATOM 835 O LYS 57 0.559 63.824 41.826 1.00 0.00 ATOM 854 N LYS 58 1.626 62.121 40.791 1.00 0.00 ATOM 855 CA LYS 58 1.510 61.072 41.806 1.00 0.00 ATOM 856 C LYS 58 0.086 60.531 42.039 1.00 0.00 ATOM 857 O LYS 58 -0.093 59.639 42.871 1.00 0.00 ATOM 876 N SER 59 -0.912 61.000 41.280 1.00 0.00 ATOM 877 CA SER 59 -2.241 60.396 41.336 1.00 0.00 ATOM 878 C SER 59 -2.213 59.255 40.338 1.00 0.00 ATOM 879 O SER 59 -1.263 59.185 39.556 1.00 0.00 ATOM 887 N GLU 60 -3.217 58.375 40.328 1.00 0.00 ATOM 888 CA GLU 60 -3.169 57.291 39.347 1.00 0.00 ATOM 889 C GLU 60 -4.394 57.121 38.473 1.00 0.00 ATOM 890 O GLU 60 -5.536 57.344 38.885 1.00 0.00 ATOM 902 N ILE 61 -4.115 56.642 37.269 1.00 0.00 ATOM 903 CA ILE 61 -5.093 56.257 36.283 1.00 0.00 ATOM 904 C ILE 61 -5.011 54.759 36.088 1.00 0.00 ATOM 905 O ILE 61 -3.945 54.213 35.779 1.00 0.00 ATOM 921 N LYS 62 -6.121 54.077 36.296 1.00 0.00 ATOM 922 CA LYS 62 -6.142 52.640 36.104 1.00 0.00 ATOM 923 C LYS 62 -6.763 52.391 34.747 1.00 0.00 ATOM 924 O LYS 62 -7.656 53.148 34.345 1.00 0.00 ATOM 943 N TYR 63 -6.333 51.334 34.069 1.00 0.00 ATOM 944 CA TYR 63 -6.906 50.985 32.786 1.00 0.00 ATOM 945 C TYR 63 -7.599 49.619 32.801 1.00 0.00 ATOM 946 O TYR 63 -7.140 48.688 33.473 1.00 0.00 ATOM 964 N THR 64 -8.666 49.484 32.020 1.00 0.00 ATOM 965 CA THR 64 -9.328 48.196 31.826 1.00 0.00 ATOM 966 C THR 64 -8.745 47.527 30.605 1.00 0.00 ATOM 967 O THR 64 -8.705 48.141 29.546 1.00 0.00 ATOM 978 N CYS 65 -8.253 46.303 30.755 1.00 0.00 ATOM 979 CA CYS 65 -7.596 45.603 29.659 1.00 0.00 ATOM 980 C CYS 65 -8.441 44.516 29.010 1.00 0.00 ATOM 981 O CYS 65 -9.011 43.662 29.695 1.00 0.00 ATOM 989 N SER 66 -8.477 44.539 27.680 1.00 0.00 ATOM 990 CA SER 66 -9.193 43.556 26.875 1.00 0.00 ATOM 991 C SER 66 -8.398 43.199 25.616 1.00 0.00 ATOM 992 O SER 66 -7.470 43.902 25.231 1.00 0.00 ATOM 1000 N VAL 67 -8.750 42.101 24.960 1.00 0.00 ATOM 1001 CA VAL 67 -8.034 41.718 23.740 1.00 0.00 ATOM 1002 C VAL 67 -8.681 42.177 22.439 1.00 0.00 ATOM 1003 O VAL 67 -9.890 42.042 22.238 1.00 0.00 ATOM 1016 N MET 68 -7.837 42.734 21.567 1.00 0.00 ATOM 1017 CA MET 68 -8.203 43.207 20.247 1.00 0.00 ATOM 1018 C MET 68 -7.680 42.212 19.201 1.00 0.00 ATOM 1019 O MET 68 -6.470 41.911 19.116 1.00 0.00 ATOM 1033 N GLY 69 -8.618 41.652 18.443 1.00 0.00 ATOM 1034 CA GLY 69 -8.291 40.634 17.461 1.00 0.00 ATOM 1035 C GLY 69 -7.596 39.501 18.179 1.00 0.00 ATOM 1036 O GLY 69 -8.063 39.044 19.219 1.00 0.00 ATOM 1040 N ASN 70 -6.486 39.046 17.624 1.00 0.00 ATOM 1041 CA ASN 70 -5.725 37.984 18.252 1.00 0.00 ATOM 1042 C ASN 70 -4.301 38.420 18.529 1.00 0.00 ATOM 1043 O ASN 70 -3.422 37.583 18.794 1.00 0.00 ATOM 1054 N ASP 71 -4.062 39.729 18.438 1.00 0.00 ATOM 1055 CA ASP 71 -2.693 40.198 18.582 1.00 0.00 ATOM 1056 C ASP 71 -2.438 41.532 19.278 1.00 0.00 ATOM 1057 O ASP 71 -1.306 41.985 19.275 1.00 0.00 ATOM 1066 N HIS 72 -3.427 42.144 19.920 1.00 0.00 ATOM 1067 CA HIS 72 -3.130 43.344 20.713 1.00 0.00 ATOM 1068 C HIS 72 -3.921 43.421 22.005 1.00 0.00 ATOM 1069 O HIS 72 -5.066 42.983 22.078 1.00 0.00 ATOM 1083 N TYR 73 -3.326 44.019 23.028 1.00 0.00 ATOM 1084 CA TYR 73 -4.085 44.277 24.232 1.00 0.00 ATOM 1085 C TYR 73 -4.512 45.722 24.164 1.00 0.00 ATOM 1086 O TYR 73 -3.738 46.587 23.756 1.00 0.00 ATOM 1104 N HIS 74 -5.735 45.988 24.561 1.00 0.00 ATOM 1105 CA HIS 74 -6.262 47.331 24.518 1.00 0.00 ATOM 1106 C HIS 74 -6.649 47.734 25.929 1.00 0.00 ATOM 1107 O HIS 74 -7.501 47.100 26.561 1.00 0.00 ATOM 1121 N CYS 75 -5.956 48.742 26.448 1.00 0.00 ATOM 1122 CA CYS 75 -6.134 49.200 27.810 1.00 0.00 ATOM 1123 C CYS 75 -6.819 50.577 27.827 1.00 0.00 ATOM 1124 O CYS 75 -6.303 51.550 27.274 1.00 0.00 ATOM 1132 N ILE 76 -8.011 50.647 28.418 1.00 0.00 ATOM 1133 CA ILE 76 -8.820 51.864 28.417 1.00 0.00 ATOM 1134 C ILE 76 -8.826 52.586 29.778 1.00 0.00 ATOM 1135 O ILE 76 -9.202 51.972 30.775 1.00 0.00 ATOM 1151 N PRO 77 -8.402 53.862 29.878 1.00 0.00 ATOM 1152 CA PRO 77 -8.301 54.592 31.121 1.00 0.00 ATOM 1153 C PRO 77 -9.652 54.877 31.708 1.00 0.00 ATOM 1154 O PRO 77 -10.556 55.340 31.013 1.00 0.00 ATOM 1165 N ASN 78 -9.738 54.706 33.013 1.00 0.00 ATOM 1166 CA ASN 78 -10.928 55.013 33.779 1.00 0.00 ATOM 1167 C ASN 78 -10.666 56.216 34.680 1.00 0.00 ATOM 1168 O ASN 78 -11.372 56.430 35.666 1.00 0.00 ATOM 1179 N GLY 79 -9.613 56.971 34.369 1.00 0.00 ATOM 1180 CA GLY 79 -9.225 58.092 35.211 1.00 0.00 ATOM 1181 C GLY 79 -8.891 59.389 34.482 1.00 0.00 ATOM 1182 O GLY 79 -9.398 59.706 33.404 1.00 0.00 ATOM 1186 N LYS 80 -8.032 60.162 35.120 1.00 0.00 ATOM 1187 CA LYS 80 -7.768 61.531 34.720 1.00 0.00 ATOM 1188 C LYS 80 -6.811 61.758 33.563 1.00 0.00 ATOM 1189 O LYS 80 -5.670 62.175 33.768 1.00 0.00 ATOM 1208 N VAL 81 -7.313 61.510 32.362 1.00 0.00 ATOM 1209 CA VAL 81 -6.576 61.778 31.128 1.00 0.00 ATOM 1210 C VAL 81 -7.497 62.673 30.284 1.00 0.00 ATOM 1211 O VAL 81 -8.705 62.669 30.521 1.00 0.00 ATOM 1224 N PRO 82 -6.992 63.457 29.314 1.00 0.00 ATOM 1225 CA PRO 82 -5.632 63.689 28.815 1.00 0.00 ATOM 1226 C PRO 82 -4.665 64.137 29.875 1.00 0.00 ATOM 1227 O PRO 82 -5.041 64.826 30.823 1.00 0.00 ATOM 1238 N ALA 83 -3.432 63.688 29.739 1.00 0.00 ATOM 1239 CA ALA 83 -2.393 63.999 30.712 1.00 0.00 ATOM 1240 C ALA 83 -1.038 63.596 30.188 1.00 0.00 ATOM 1241 O ALA 83 -0.955 62.714 29.344 1.00 0.00 ATOM 1248 N LYS 84 0.025 64.180 30.720 1.00 0.00 ATOM 1249 CA LYS 84 1.343 63.627 30.457 1.00 0.00 ATOM 1250 C LYS 84 1.628 62.696 31.617 1.00 0.00 ATOM 1251 O LYS 84 1.546 63.143 32.761 1.00 0.00 ATOM 1270 N THR 85 1.907 61.412 31.368 1.00 0.00 ATOM 1271 CA THR 85 2.051 60.533 32.519 1.00 0.00 ATOM 1272 C THR 85 3.282 59.651 32.529 1.00 0.00 ATOM 1273 O THR 85 4.005 59.513 31.544 1.00 0.00 ATOM 1284 N ASN 86 3.481 59.039 33.682 1.00 0.00 ATOM 1285 CA ASN 86 4.458 57.980 33.874 1.00 0.00 ATOM 1286 C ASN 86 3.686 56.682 33.688 1.00 0.00 ATOM 1287 O ASN 86 2.831 56.358 34.512 1.00 0.00 ATOM 1298 N LEU 87 3.876 55.985 32.567 1.00 0.00 ATOM 1299 CA LEU 87 3.045 54.812 32.325 1.00 0.00 ATOM 1300 C LEU 87 3.756 53.548 32.744 1.00 0.00 ATOM 1301 O LEU 87 4.896 53.297 32.350 1.00 0.00 ATOM 1317 N ILE 88 3.060 52.735 33.519 1.00 0.00 ATOM 1318 CA ILE 88 3.594 51.484 34.001 1.00 0.00 ATOM 1319 C ILE 88 2.734 50.346 33.485 1.00 0.00 ATOM 1320 O ILE 88 1.503 50.338 33.644 1.00 0.00 ATOM 1336 N VAL 89 3.371 49.388 32.850 1.00 0.00 ATOM 1337 CA VAL 89 2.636 48.262 32.320 1.00 0.00 ATOM 1338 C VAL 89 3.123 46.979 32.937 1.00 0.00 ATOM 1339 O VAL 89 4.327 46.751 33.103 1.00 0.00 ATOM 1352 N GLN 90 2.162 46.147 33.285 1.00 0.00 ATOM 1353 CA GLN 90 2.415 44.850 33.852 1.00 0.00 ATOM 1354 C GLN 90 2.038 43.825 32.814 1.00 0.00 ATOM 1355 O GLN 90 1.039 43.981 32.101 1.00 0.00 ATOM 1369 N ALA 91 2.777 42.739 32.767 1.00 0.00 ATOM 1370 CA ALA 91 2.412 41.674 31.862 1.00 0.00 ATOM 1371 C ALA 91 2.876 40.336 32.379 1.00 0.00 ATOM 1372 O ALA 91 3.807 40.255 33.181 1.00 0.00 ATOM 1379 N THR 92 2.221 39.284 31.918 1.00 0.00 ATOM 1380 CA THR 92 2.643 37.945 32.296 1.00 0.00 ATOM 1381 C THR 92 3.074 37.149 31.074 1.00 0.00 ATOM 1382 O THR 92 2.357 37.088 30.071 1.00 0.00 ATOM 1393 N ARG 93 4.247 36.529 31.188 1.00 0.00 ATOM 1394 CA ARG 93 4.834 35.672 30.166 1.00 0.00 ATOM 1395 C ARG 93 4.163 34.311 30.197 1.00 0.00 ATOM 1396 O ARG 93 3.836 33.808 31.277 1.00 0.00 ATOM 1417 N GLU 94 4.063 33.660 29.035 1.00 0.00 ATOM 1418 CA GLU 94 3.462 32.323 28.855 1.00 0.00 ATOM 1419 C GLU 94 4.025 31.216 29.780 1.00 0.00 ATOM 1420 O GLU 94 3.464 30.125 29.869 1.00 0.00 ATOM 1432 N LYS 95 5.122 31.518 30.473 1.00 0.00 ATOM 1433 CA LYS 95 5.803 30.648 31.420 1.00 0.00 ATOM 1434 C LYS 95 5.271 30.901 32.836 1.00 0.00 ATOM 1435 O LYS 95 5.793 30.361 33.812 1.00 0.00 ATOM 1454 N ALA 96 4.216 31.725 32.926 1.00 0.00 ATOM 1455 CA ALA 96 3.563 32.174 34.159 1.00 0.00 ATOM 1456 C ALA 96 4.517 33.009 34.994 1.00 0.00 ATOM 1457 O ALA 96 4.657 32.815 36.203 1.00 0.00 ATOM 1464 N VAL 97 5.176 33.948 34.320 1.00 0.00 ATOM 1465 CA VAL 97 6.134 34.839 34.973 1.00 0.00 ATOM 1466 C VAL 97 5.773 36.311 34.810 1.00 0.00 ATOM 1467 O VAL 97 5.578 36.798 33.696 1.00 0.00 ATOM 1480 N GLY 98 5.668 37.031 35.924 1.00 0.00 ATOM 1481 CA GLY 98 5.320 38.448 35.839 1.00 0.00 ATOM 1482 C GLY 98 6.507 39.300 35.390 1.00 0.00 ATOM 1483 O GLY 98 7.648 39.033 35.775 1.00 0.00 ATOM 1487 N ASN 99 6.206 40.365 34.645 1.00 0.00 ATOM 1488 CA ASN 99 7.184 41.338 34.158 1.00 0.00 ATOM 1489 C ASN 99 6.619 42.764 34.178 1.00 0.00 ATOM 1490 O ASN 99 5.414 42.974 34.017 1.00 0.00 ATOM 1501 N GLU 100 7.493 43.752 34.384 1.00 0.00 ATOM 1502 CA GLU 100 7.062 45.154 34.358 1.00 0.00 ATOM 1503 C GLU 100 7.957 46.051 33.510 1.00 0.00 ATOM 1504 O GLU 100 9.159 45.808 33.381 1.00 0.00 ATOM 1516 N ALA 101 7.367 47.124 32.985 1.00 0.00 ATOM 1517 CA ALA 101 8.108 48.133 32.226 1.00 0.00 ATOM 1518 C ALA 101 7.550 49.534 32.466 1.00 0.00 ATOM 1519 O ALA 101 6.365 49.703 32.778 1.00 0.00 ATOM 1526 N VAL 102 8.418 50.544 32.344 1.00 0.00 ATOM 1527 CA VAL 102 8.010 51.933 32.566 1.00 0.00 ATOM 1528 C VAL 102 8.384 52.861 31.401 1.00 0.00 ATOM 1529 O VAL 102 9.522 52.852 30.914 1.00 0.00 ATOM 1542 N TYR 103 7.419 53.674 30.957 1.00 0.00 ATOM 1543 CA TYR 103 7.669 54.554 29.829 1.00 0.00 ATOM 1544 C TYR 103 7.231 56.012 30.050 1.00 0.00 ATOM 1545 O TYR 103 6.178 56.315 30.623 1.00 0.00 ATOM 1563 N LYS 104 8.008 56.939 29.495 1.00 0.00 ATOM 1564 CA LYS 104 7.650 58.357 29.572 1.00 0.00 ATOM 1565 C LYS 104 6.709 58.725 28.434 1.00 0.00 ATOM 1566 O LYS 104 7.096 59.375 27.463 1.00 0.00 ATOM 1585 N LEU 105 5.480 58.259 28.557 1.00 0.00 ATOM 1586 CA LEU 105 4.480 58.424 27.517 1.00 0.00 ATOM 1587 C LEU 105 3.443 59.487 27.817 1.00 0.00 ATOM 1588 O LEU 105 2.711 59.378 28.804 1.00 0.00 ATOM 1604 N PRO 106 3.365 60.547 27.013 1.00 0.00 ATOM 1605 CA PRO 106 2.381 61.558 27.163 1.00 0.00 ATOM 1606 C PRO 106 1.102 60.975 26.632 1.00 0.00 ATOM 1607 O PRO 106 1.148 60.136 25.729 1.00 0.00 ATOM 1618 N LEU 107 -0.030 61.460 27.098 1.00 0.00 ATOM 1619 CA LEU 107 -1.289 61.106 26.475 1.00 0.00 ATOM 1620 C LEU 107 -1.986 62.402 26.050 1.00 0.00 ATOM 1621 O LEU 107 -2.833 62.912 26.797 1.00 0.00 ATOM 1637 N PRO 108 -1.602 62.999 24.895 1.00 0.00 ATOM 1638 CA PRO 108 -2.062 64.275 24.387 1.00 0.00 ATOM 1639 C PRO 108 -3.541 64.239 24.136 1.00 0.00 ATOM 1640 O PRO 108 -4.123 63.154 24.011 1.00 0.00 ATOM 1651 N ALA 109 -4.152 65.411 24.101 1.00 0.00 ATOM 1652 CA ALA 109 -5.536 65.503 23.703 1.00 0.00 ATOM 1653 C ALA 109 -5.599 65.484 22.192 1.00 0.00 ATOM 1654 O ALA 109 -4.742 66.080 21.533 1.00 0.00 ATOM 1661 N PHE 110 -6.611 64.846 21.647 1.00 0.00 ATOM 1662 CA PHE 110 -6.828 64.804 20.214 1.00 0.00 ATOM 1663 C PHE 110 -8.279 65.100 19.926 1.00 0.00 ATOM 1664 O PHE 110 -9.144 64.873 20.776 1.00 0.00 TER END