####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 69 ( 276), selected 69 , name R0974s1TS433_4 # Molecule2: number of CA atoms 69 ( 556), selected 69 , name R0974s1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap R0974s1TS433_4.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 69 2 - 70 2.33 2.33 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 67 2 - 68 1.82 2.38 LCS_AVERAGE: 94.43 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 52 6 - 57 0.98 2.46 LONGEST_CONTINUOUS_SEGMENT: 52 7 - 58 1.00 2.43 LCS_AVERAGE: 63.01 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 69 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 2 S 2 8 67 69 3 10 38 54 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT Y 3 Y 3 32 67 69 4 28 53 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT D 4 D 4 32 67 69 12 36 53 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT Y 5 Y 5 32 67 69 4 34 48 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT S 6 S 6 52 67 69 8 17 42 54 60 62 64 64 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT S 7 S 7 52 67 69 8 33 47 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT L 8 L 8 52 67 69 8 33 53 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT L 9 L 9 52 67 69 8 36 53 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT G 10 G 10 52 67 69 12 36 53 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT K 11 K 11 52 67 69 16 39 53 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT I 12 I 12 52 67 69 16 39 53 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT T 13 T 13 52 67 69 10 39 53 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT E 14 E 14 52 67 69 12 39 53 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT K 15 K 15 52 67 69 8 39 53 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT C 16 C 16 52 67 69 8 36 53 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT G 17 G 17 52 67 69 8 36 53 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT T 18 T 18 52 67 69 6 36 53 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT Q 19 Q 19 52 67 69 12 36 53 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT Y 20 Y 20 52 67 69 16 39 53 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT N 21 N 21 52 67 69 16 39 53 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT F 22 F 22 52 67 69 16 39 53 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT A 23 A 23 52 67 69 15 39 53 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT I 24 I 24 52 67 69 16 39 53 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT A 25 A 25 52 67 69 16 39 53 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT M 26 M 26 52 67 69 15 39 53 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT G 27 G 27 52 67 69 16 39 53 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT L 28 L 28 52 67 69 15 39 53 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT S 29 S 29 52 67 69 13 39 53 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT E 30 E 30 52 67 69 11 39 53 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT R 31 R 31 52 67 69 11 38 53 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT T 32 T 32 52 67 69 11 39 53 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT V 33 V 33 52 67 69 14 39 53 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT S 34 S 34 52 67 69 14 39 53 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT L 35 L 35 52 67 69 15 39 53 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT K 36 K 36 52 67 69 15 39 53 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT L 37 L 37 52 67 69 11 39 53 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT N 38 N 38 52 67 69 15 39 53 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT D 39 D 39 52 67 69 5 39 53 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT K 40 K 40 52 67 69 15 39 53 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT V 41 V 41 52 67 69 15 39 53 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT T 42 T 42 52 67 69 7 39 53 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT W 43 W 43 52 67 69 11 39 53 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT K 44 K 44 52 67 69 13 39 53 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT D 45 D 45 52 67 69 6 39 53 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT D 46 D 46 52 67 69 6 39 53 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT E 47 E 47 52 67 69 9 39 53 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT I 48 I 48 52 67 69 16 39 53 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT L 49 L 49 52 67 69 16 39 53 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT K 50 K 50 52 67 69 16 39 53 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT A 51 A 51 52 67 69 16 39 53 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT V 52 V 52 52 67 69 7 39 53 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT H 53 H 53 52 67 69 16 39 53 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT V 54 V 54 52 67 69 16 39 53 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT L 55 L 55 52 67 69 16 39 53 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT E 56 E 56 52 67 69 16 39 53 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT L 57 L 57 52 67 69 12 39 53 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT N 58 N 58 52 67 69 4 11 45 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT P 59 P 59 43 67 69 4 8 14 34 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT Q 60 Q 60 12 67 69 4 8 14 29 53 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT D 61 D 61 12 67 69 4 11 32 56 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT I 62 I 62 12 67 69 4 36 53 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT P 63 P 63 12 67 69 4 16 48 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT K 64 K 64 10 67 69 4 8 11 46 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT Y 65 Y 65 10 67 69 4 8 11 13 32 61 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT F 66 F 66 10 67 69 3 6 11 13 15 50 57 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT F 67 F 67 7 67 69 3 5 11 13 15 50 57 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT N 68 N 68 6 67 69 3 5 11 13 15 27 54 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT A 69 A 69 3 4 69 3 3 4 4 4 7 9 11 17 23 26 43 67 69 69 69 69 69 69 69 LCS_GDT K 70 K 70 3 3 69 0 3 3 3 3 11 14 18 26 63 68 68 68 69 69 69 69 69 69 69 LCS_AVERAGE LCS_A: 85.82 ( 63.01 94.43 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 16 39 53 57 60 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 GDT PERCENT_AT 23.19 56.52 76.81 82.61 86.96 89.86 92.75 95.65 97.10 97.10 98.55 98.55 98.55 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.37 0.67 0.92 1.07 1.23 1.34 1.49 1.80 1.82 1.82 2.05 2.05 2.05 2.33 2.33 2.33 2.33 2.33 2.33 2.33 GDT RMS_ALL_AT 2.61 2.44 2.45 2.46 2.47 2.43 2.44 2.37 2.38 2.38 2.34 2.34 2.34 2.33 2.33 2.33 2.33 2.33 2.33 2.33 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 2 S 2 2.353 2 0.110 0.110 2.821 45.455 30.303 - LGA Y 3 Y 3 1.209 8 0.066 0.066 2.026 58.636 19.545 - LGA D 4 D 4 1.544 4 0.059 0.059 1.592 58.182 29.091 - LGA Y 5 Y 5 2.074 8 0.037 0.037 2.479 41.364 13.788 - LGA S 6 S 6 2.855 2 0.140 0.140 2.855 30.000 20.000 - LGA S 7 S 7 2.199 2 0.122 0.122 2.489 44.545 29.697 - LGA L 8 L 8 1.721 4 0.065 0.065 2.061 51.364 25.682 - LGA L 9 L 9 1.609 4 0.013 0.013 1.720 58.182 29.091 - LGA G 10 G 10 1.561 0 0.030 0.030 1.561 58.182 58.182 - LGA K 11 K 11 1.099 5 0.042 0.042 1.160 65.455 29.091 - LGA I 12 I 12 1.033 4 0.018 0.018 1.163 65.455 32.727 - LGA T 13 T 13 1.135 3 0.018 0.018 1.344 65.455 37.403 - LGA E 14 E 14 1.298 5 0.058 0.058 1.355 65.455 29.091 - LGA K 15 K 15 1.384 5 0.175 0.175 1.384 69.545 30.909 - LGA C 16 C 16 1.338 2 0.077 0.077 1.439 65.455 43.636 - LGA G 17 G 17 1.404 0 0.401 0.401 2.488 58.636 58.636 - LGA T 18 T 18 0.896 3 0.052 0.052 0.896 81.818 46.753 - LGA Q 19 Q 19 1.087 5 0.030 0.030 1.087 69.545 30.909 - LGA Y 20 Y 20 0.768 8 0.013 0.013 0.846 81.818 27.273 - LGA N 21 N 21 0.695 4 0.026 0.026 0.718 81.818 40.909 - LGA F 22 F 22 0.635 7 0.070 0.070 0.874 81.818 29.752 - LGA A 23 A 23 0.828 1 0.032 0.032 0.921 81.818 65.455 - LGA I 24 I 24 0.716 4 0.023 0.023 0.752 81.818 40.909 - LGA A 25 A 25 0.807 1 0.022 0.022 0.893 81.818 65.455 - LGA M 26 M 26 1.001 4 0.083 0.083 1.001 77.727 38.864 - LGA G 27 G 27 0.612 0 0.028 0.028 0.778 90.909 90.909 - LGA L 28 L 28 0.550 4 0.026 0.026 0.724 81.818 40.909 - LGA S 29 S 29 0.927 2 0.010 0.010 1.007 77.727 51.818 - LGA E 30 E 30 1.185 5 0.034 0.034 1.313 65.455 29.091 - LGA R 31 R 31 1.228 7 0.038 0.038 1.228 65.455 23.802 - LGA T 32 T 32 1.094 3 0.039 0.039 1.256 69.545 39.740 - LGA V 33 V 33 0.893 3 0.042 0.042 1.010 77.727 44.416 - LGA S 34 S 34 1.019 2 0.028 0.028 1.022 73.636 49.091 - LGA L 35 L 35 0.975 4 0.052 0.052 1.168 77.727 38.864 - LGA K 36 K 36 0.830 5 0.082 0.082 1.302 77.727 34.545 - LGA L 37 L 37 0.856 4 0.079 0.079 1.114 77.727 38.864 - LGA N 38 N 38 1.309 4 0.034 0.034 1.580 65.909 32.955 - LGA D 39 D 39 1.282 4 0.018 0.018 1.384 65.455 32.727 - LGA K 40 K 40 1.217 5 0.032 0.032 1.217 65.455 29.091 - LGA V 41 V 41 1.073 3 0.133 0.133 1.318 65.455 37.403 - LGA T 42 T 42 1.454 3 0.048 0.048 1.454 65.455 37.403 - LGA W 43 W 43 0.938 10 0.037 0.037 1.144 77.727 22.208 - LGA K 44 K 44 0.957 5 0.041 0.041 0.957 81.818 36.364 - LGA D 45 D 45 1.197 4 0.138 0.138 1.220 65.455 32.727 - LGA D 46 D 46 1.010 4 0.048 0.048 1.010 77.727 38.864 - LGA E 47 E 47 0.611 5 0.011 0.011 0.643 90.909 40.404 - LGA I 48 I 48 0.423 4 0.090 0.090 0.474 100.000 50.000 - LGA L 49 L 49 0.602 4 0.042 0.042 0.759 90.909 45.455 - LGA K 50 K 50 0.199 5 0.025 0.025 0.266 100.000 44.444 - LGA A 51 A 51 0.519 1 0.055 0.055 0.979 86.364 69.091 - LGA V 52 V 52 1.170 3 0.041 0.041 1.172 69.545 39.740 - LGA H 53 H 53 0.596 6 0.076 0.076 0.813 81.818 32.727 - LGA V 54 V 54 0.566 3 0.037 0.037 0.614 81.818 46.753 - LGA L 55 L 55 0.410 4 0.058 0.058 0.473 100.000 50.000 - LGA E 56 E 56 0.714 5 0.028 0.028 0.714 90.909 40.404 - LGA L 57 L 57 0.288 4 0.047 0.047 1.346 82.727 41.364 - LGA N 58 N 58 2.216 4 0.101 0.101 2.421 41.364 20.682 - LGA P 59 P 59 3.273 3 0.044 0.044 3.797 16.818 9.610 - LGA Q 60 Q 60 4.353 5 0.086 0.086 4.353 9.545 4.242 - LGA D 61 D 61 2.619 4 0.027 0.027 3.116 40.455 20.227 - LGA I 62 I 62 1.377 4 0.060 0.060 1.438 65.455 32.727 - LGA P 63 P 63 2.163 3 0.052 0.052 2.163 51.818 29.610 - LGA K 64 K 64 3.120 5 0.172 0.172 4.138 20.000 8.889 - LGA Y 65 Y 65 3.546 8 0.047 0.047 5.478 10.909 3.636 - LGA F 66 F 66 4.548 7 0.176 0.176 6.228 3.636 1.322 - LGA F 67 F 67 4.413 7 0.242 0.242 4.413 5.455 1.983 - LGA N 68 N 68 5.749 4 0.581 0.581 8.911 0.455 0.227 - LGA A 69 A 69 9.933 1 0.612 0.612 9.933 0.000 0.000 - LGA K 70 K 70 8.250 5 0.528 0.528 10.158 0.000 0.000 - # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 69 276 276 100.00 556 276 49.64 69 0 SUMMARY(RMSD_GDC): 2.327 2.357 2.357 62.727 33.601 0.000 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 69 69 4.0 66 1.80 83.696 89.684 3.476 LGA_LOCAL RMSD: 1.799 Number of atoms: 66 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 2.372 Number of assigned atoms: 69 Std_ASGN_ATOMS RMSD: 2.327 Standard rmsd on all 69 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.956724 * X + 0.290008 * Y + -0.023980 * Z + -2.742058 Y_new = 0.204468 * X + -0.611314 * Y + 0.764518 * Z + 31.739176 Z_new = 0.207057 * X + -0.736336 * Y + -0.644156 * Z + -1.445637 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.210549 -0.208566 -2.289520 [DEG: 12.0636 -11.9500 -131.1799 ] ZXZ: -3.110237 2.270715 2.867472 [DEG: -178.2034 130.1024 164.2940 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: R0974s1TS433_4 REMARK 2: R0974s1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap R0974s1TS433_4.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 69 69 4.0 66 1.80 89.684 2.33 REMARK ---------------------------------------------------------- MOLECULE R0974s1TS433_4 PFRMAT TS TARGET R0974s1 MODEL 4 PARENT N/A ATOM 20 N SER 2 -2.742 31.739 -1.446 1.00 0.00 ATOM 21 CA SER 2 -4.046 31.920 -0.818 1.00 0.00 ATOM 22 C SER 2 -3.951 31.466 0.626 1.00 0.00 ATOM 23 O SER 2 -3.212 30.529 0.929 1.00 0.00 ATOM 31 N TYR 3 -4.707 32.107 1.502 1.00 0.00 ATOM 32 CA TYR 3 -4.721 31.753 2.913 1.00 0.00 ATOM 33 C TYR 3 -5.657 30.601 3.211 1.00 0.00 ATOM 34 O TYR 3 -6.665 30.431 2.529 1.00 0.00 ATOM 52 N ASP 4 -5.293 29.810 4.216 1.00 0.00 ATOM 53 CA ASP 4 -6.113 28.727 4.751 1.00 0.00 ATOM 54 C ASP 4 -5.868 28.630 6.241 1.00 0.00 ATOM 55 O ASP 4 -4.886 28.032 6.674 1.00 0.00 ATOM 64 N TYR 5 -6.805 29.136 7.018 1.00 0.00 ATOM 65 CA TYR 5 -6.665 29.234 8.464 1.00 0.00 ATOM 66 C TYR 5 -7.366 28.102 9.217 1.00 0.00 ATOM 67 O TYR 5 -7.527 28.150 10.453 1.00 0.00 ATOM 85 N SER 6 -7.758 27.072 8.477 1.00 0.00 ATOM 86 CA SER 6 -8.485 25.946 9.026 1.00 0.00 ATOM 87 C SER 6 -7.705 25.156 10.075 1.00 0.00 ATOM 88 O SER 6 -8.326 24.527 10.930 1.00 0.00 ATOM 96 N SER 7 -6.361 25.180 10.053 1.00 0.00 ATOM 97 CA SER 7 -5.596 24.443 11.052 1.00 0.00 ATOM 98 C SER 7 -5.698 25.095 12.412 1.00 0.00 ATOM 99 O SER 7 -5.477 24.442 13.447 1.00 0.00 ATOM 107 N LEU 8 -6.047 26.384 12.452 1.00 0.00 ATOM 108 CA LEU 8 -6.123 27.004 13.737 1.00 0.00 ATOM 109 C LEU 8 -7.451 26.536 14.307 1.00 0.00 ATOM 110 O LEU 8 -7.535 26.173 15.478 1.00 0.00 ATOM 126 N LEU 9 -8.470 26.448 13.430 1.00 0.00 ATOM 127 CA LEU 9 -9.804 25.995 13.841 1.00 0.00 ATOM 128 C LEU 9 -9.766 24.564 14.338 1.00 0.00 ATOM 129 O LEU 9 -10.495 24.186 15.264 1.00 0.00 ATOM 145 N GLY 10 -8.942 23.757 13.698 1.00 0.00 ATOM 146 CA GLY 10 -8.814 22.361 14.060 1.00 0.00 ATOM 147 C GLY 10 -8.371 22.223 15.518 1.00 0.00 ATOM 148 O GLY 10 -9.020 21.538 16.321 1.00 0.00 ATOM 152 N LYS 11 -7.313 22.945 15.888 1.00 0.00 ATOM 153 CA LYS 11 -6.838 22.853 17.267 1.00 0.00 ATOM 154 C LYS 11 -7.845 23.500 18.238 1.00 0.00 ATOM 155 O LYS 11 -7.969 23.054 19.384 1.00 0.00 ATOM 174 N ILE 12 -8.547 24.547 17.798 1.00 0.00 ATOM 175 CA ILE 12 -9.562 25.214 18.620 1.00 0.00 ATOM 176 C ILE 12 -10.653 24.231 18.964 1.00 0.00 ATOM 177 O ILE 12 -11.074 24.140 20.121 1.00 0.00 ATOM 193 N THR 13 -11.087 23.448 17.984 1.00 0.00 ATOM 194 CA THR 13 -12.117 22.467 18.262 1.00 0.00 ATOM 195 C THR 13 -11.658 21.536 19.393 1.00 0.00 ATOM 196 O THR 13 -12.437 21.271 20.313 1.00 0.00 ATOM 207 N GLU 14 -10.406 21.056 19.349 1.00 0.00 ATOM 208 CA GLU 14 -9.914 20.161 20.403 1.00 0.00 ATOM 209 C GLU 14 -9.685 20.813 21.792 1.00 0.00 ATOM 210 O GLU 14 -9.942 20.181 22.822 1.00 0.00 ATOM 222 N LYS 15 -9.196 22.060 21.828 1.00 0.00 ATOM 223 CA LYS 15 -8.849 22.739 23.090 1.00 0.00 ATOM 224 C LYS 15 -9.877 23.695 23.694 1.00 0.00 ATOM 225 O LYS 15 -9.830 23.975 24.893 1.00 0.00 ATOM 244 N CYS 16 -10.750 24.251 22.879 1.00 0.00 ATOM 245 CA CYS 16 -11.716 25.241 23.345 1.00 0.00 ATOM 246 C CYS 16 -13.151 24.768 23.083 1.00 0.00 ATOM 247 O CYS 16 -14.069 24.983 23.888 1.00 0.00 ATOM 255 N GLY 17 -13.342 24.162 21.908 1.00 0.00 ATOM 256 CA GLY 17 -14.618 23.644 21.425 1.00 0.00 ATOM 257 C GLY 17 -15.388 24.656 20.593 1.00 0.00 ATOM 258 O GLY 17 -16.364 24.321 19.918 1.00 0.00 ATOM 262 N THR 18 -14.952 25.899 20.665 1.00 0.00 ATOM 263 CA THR 18 -15.568 27.000 19.963 1.00 0.00 ATOM 264 C THR 18 -14.669 28.213 19.888 1.00 0.00 ATOM 265 O THR 18 -13.890 28.493 20.820 1.00 0.00 ATOM 276 N GLN 19 -14.881 28.994 18.829 1.00 0.00 ATOM 277 CA GLN 19 -14.172 30.237 18.600 1.00 0.00 ATOM 278 C GLN 19 -14.400 31.170 19.755 1.00 0.00 ATOM 279 O GLN 19 -13.513 31.925 20.132 1.00 0.00 ATOM 293 N TYR 20 -15.557 31.044 20.385 1.00 0.00 ATOM 294 CA TYR 20 -15.913 31.854 21.525 1.00 0.00 ATOM 295 C TYR 20 -14.920 31.771 22.678 1.00 0.00 ATOM 296 O TYR 20 -14.608 32.800 23.281 1.00 0.00 ATOM 314 N ASN 21 -14.500 30.559 23.041 1.00 0.00 ATOM 315 CA ASN 21 -13.643 30.364 24.205 1.00 0.00 ATOM 316 C ASN 21 -12.228 30.754 23.864 1.00 0.00 ATOM 317 O ASN 21 -11.497 31.348 24.666 1.00 0.00 ATOM 328 N PHE 22 -11.873 30.484 22.624 1.00 0.00 ATOM 329 CA PHE 22 -10.572 30.838 22.117 1.00 0.00 ATOM 330 C PHE 22 -10.458 32.350 22.175 1.00 0.00 ATOM 331 O PHE 22 -9.548 32.911 22.792 1.00 0.00 ATOM 348 N ALA 23 -11.478 33.020 21.651 1.00 0.00 ATOM 349 CA ALA 23 -11.504 34.456 21.612 1.00 0.00 ATOM 350 C ALA 23 -11.349 35.035 23.007 1.00 0.00 ATOM 351 O ALA 23 -10.460 35.860 23.230 1.00 0.00 ATOM 358 N ILE 24 -12.023 34.456 24.006 1.00 0.00 ATOM 359 CA ILE 24 -11.881 34.984 25.352 1.00 0.00 ATOM 360 C ILE 24 -10.445 34.908 25.806 1.00 0.00 ATOM 361 O ILE 24 -9.900 35.883 26.322 1.00 0.00 ATOM 377 N ALA 25 -9.807 33.764 25.586 1.00 0.00 ATOM 378 CA ALA 25 -8.432 33.581 26.012 1.00 0.00 ATOM 379 C ALA 25 -7.494 34.619 25.378 1.00 0.00 ATOM 380 O ALA 25 -6.520 35.048 26.003 1.00 0.00 ATOM 387 N MET 26 -7.783 35.021 24.139 1.00 0.00 ATOM 388 CA MET 26 -6.975 35.997 23.420 1.00 0.00 ATOM 389 C MET 26 -7.392 37.453 23.629 1.00 0.00 ATOM 390 O MET 26 -6.797 38.359 23.035 1.00 0.00 ATOM 404 N GLY 27 -8.471 37.695 24.368 1.00 0.00 ATOM 405 CA GLY 27 -8.966 39.055 24.518 1.00 0.00 ATOM 406 C GLY 27 -9.739 39.557 23.283 1.00 0.00 ATOM 407 O GLY 27 -9.832 40.768 23.057 1.00 0.00 ATOM 411 N LEU 28 -10.246 38.638 22.456 1.00 0.00 ATOM 412 CA LEU 28 -10.970 38.980 21.235 1.00 0.00 ATOM 413 C LEU 28 -12.439 38.596 21.346 1.00 0.00 ATOM 414 O LEU 28 -12.798 37.697 22.096 1.00 0.00 ATOM 430 N SER 29 -13.306 39.226 20.565 1.00 0.00 ATOM 431 CA SER 29 -14.687 38.734 20.528 1.00 0.00 ATOM 432 C SER 29 -14.740 37.473 19.657 1.00 0.00 ATOM 433 O SER 29 -13.863 37.294 18.802 1.00 0.00 ATOM 441 N GLU 30 -15.788 36.643 19.804 1.00 0.00 ATOM 442 CA GLU 30 -15.886 35.402 19.026 1.00 0.00 ATOM 443 C GLU 30 -16.028 35.638 17.528 1.00 0.00 ATOM 444 O GLU 30 -15.612 34.799 16.723 1.00 0.00 ATOM 456 N ARG 31 -16.558 36.804 17.160 1.00 0.00 ATOM 457 CA ARG 31 -16.726 37.194 15.776 1.00 0.00 ATOM 458 C ARG 31 -15.376 37.489 15.161 1.00 0.00 ATOM 459 O ARG 31 -15.167 37.254 13.966 1.00 0.00 ATOM 480 N THR 32 -14.488 38.065 15.970 1.00 0.00 ATOM 481 CA THR 32 -13.185 38.493 15.525 1.00 0.00 ATOM 482 C THR 32 -12.429 37.263 15.116 1.00 0.00 ATOM 483 O THR 32 -11.788 37.235 14.062 1.00 0.00 ATOM 494 N VAL 33 -12.541 36.223 15.942 1.00 0.00 ATOM 495 CA VAL 33 -11.854 34.993 15.633 1.00 0.00 ATOM 496 C VAL 33 -12.424 34.346 14.403 1.00 0.00 ATOM 497 O VAL 33 -11.675 34.022 13.483 1.00 0.00 ATOM 510 N SER 34 -13.740 34.268 14.302 1.00 0.00 ATOM 511 CA SER 34 -14.304 33.581 13.165 1.00 0.00 ATOM 512 C SER 34 -13.829 34.197 11.863 1.00 0.00 ATOM 513 O SER 34 -13.350 33.484 10.979 1.00 0.00 ATOM 521 N LEU 35 -13.836 35.516 11.748 1.00 0.00 ATOM 522 CA LEU 35 -13.409 36.105 10.493 1.00 0.00 ATOM 523 C LEU 35 -11.918 35.843 10.231 1.00 0.00 ATOM 524 O LEU 35 -11.518 35.559 9.083 1.00 0.00 ATOM 540 N LYS 36 -11.097 35.893 11.293 1.00 0.00 ATOM 541 CA LYS 36 -9.660 35.662 11.183 1.00 0.00 ATOM 542 C LYS 36 -9.322 34.202 10.875 1.00 0.00 ATOM 543 O LYS 36 -8.284 33.931 10.282 1.00 0.00 ATOM 562 N LEU 37 -10.172 33.242 11.279 1.00 0.00 ATOM 563 CA LEU 37 -9.880 31.852 10.933 1.00 0.00 ATOM 564 C LEU 37 -10.767 31.261 9.821 1.00 0.00 ATOM 565 O LEU 37 -10.516 30.147 9.367 1.00 0.00 ATOM 581 N ASN 38 -11.735 32.040 9.304 1.00 0.00 ATOM 582 CA ASN 38 -12.596 31.618 8.191 1.00 0.00 ATOM 583 C ASN 38 -12.174 32.268 6.880 1.00 0.00 ATOM 584 O ASN 38 -12.954 32.307 5.918 1.00 0.00 ATOM 595 N ASP 39 -10.930 32.740 6.858 1.00 0.00 ATOM 596 CA ASP 39 -10.261 33.387 5.740 1.00 0.00 ATOM 597 C ASP 39 -10.948 34.643 5.204 1.00 0.00 ATOM 598 O ASP 39 -10.944 34.883 3.994 1.00 0.00 ATOM 607 N LYS 40 -11.476 35.487 6.089 1.00 0.00 ATOM 608 CA LYS 40 -12.083 36.734 5.632 1.00 0.00 ATOM 609 C LYS 40 -11.141 37.906 5.916 1.00 0.00 ATOM 610 O LYS 40 -11.117 38.906 5.198 1.00 0.00 ATOM 629 N VAL 41 -10.419 37.796 7.019 1.00 0.00 ATOM 630 CA VAL 41 -9.447 38.804 7.459 1.00 0.00 ATOM 631 C VAL 41 -8.166 38.081 7.893 1.00 0.00 ATOM 632 O VAL 41 -8.172 36.870 8.069 1.00 0.00 ATOM 645 N THR 42 -7.067 38.800 8.077 1.00 0.00 ATOM 646 CA THR 42 -5.837 38.148 8.532 1.00 0.00 ATOM 647 C THR 42 -5.495 38.404 10.005 1.00 0.00 ATOM 648 O THR 42 -6.033 39.309 10.653 1.00 0.00 ATOM 659 N TRP 43 -4.561 37.608 10.528 1.00 0.00 ATOM 660 CA TRP 43 -4.042 37.763 11.892 1.00 0.00 ATOM 661 C TRP 43 -2.909 38.782 11.924 1.00 0.00 ATOM 662 O TRP 43 -2.082 38.813 11.014 1.00 0.00 ATOM 683 N LYS 44 -2.846 39.597 12.973 1.00 0.00 ATOM 684 CA LYS 44 -1.742 40.542 13.116 1.00 0.00 ATOM 685 C LYS 44 -0.526 39.838 13.691 1.00 0.00 ATOM 686 O LYS 44 -0.642 38.866 14.446 1.00 0.00 ATOM 705 N ASP 45 0.649 40.427 13.507 1.00 0.00 ATOM 706 CA ASP 45 1.861 39.828 14.056 1.00 0.00 ATOM 707 C ASP 45 1.767 39.579 15.565 1.00 0.00 ATOM 708 O ASP 45 2.366 38.637 16.072 1.00 0.00 ATOM 717 N ASP 46 1.060 40.432 16.307 1.00 0.00 ATOM 718 CA ASP 46 0.974 40.212 17.747 1.00 0.00 ATOM 719 C ASP 46 -0.165 39.250 18.101 1.00 0.00 ATOM 720 O ASP 46 -0.052 38.433 19.025 1.00 0.00 ATOM 729 N GLU 47 -1.251 39.294 17.325 1.00 0.00 ATOM 730 CA GLU 47 -2.395 38.442 17.588 1.00 0.00 ATOM 731 C GLU 47 -2.058 36.980 17.364 1.00 0.00 ATOM 732 O GLU 47 -2.463 36.134 18.149 1.00 0.00 ATOM 744 N ILE 48 -1.279 36.668 16.332 1.00 0.00 ATOM 745 CA ILE 48 -0.988 35.265 16.108 1.00 0.00 ATOM 746 C ILE 48 -0.137 34.715 17.250 1.00 0.00 ATOM 747 O ILE 48 -0.243 33.538 17.599 1.00 0.00 ATOM 763 N LEU 49 0.705 35.555 17.836 1.00 0.00 ATOM 764 CA LEU 49 1.523 35.102 18.943 1.00 0.00 ATOM 765 C LEU 49 0.628 34.793 20.136 1.00 0.00 ATOM 766 O LEU 49 0.795 33.772 20.809 1.00 0.00 ATOM 782 N LYS 50 -0.396 35.608 20.357 1.00 0.00 ATOM 783 CA LYS 50 -1.287 35.286 21.454 1.00 0.00 ATOM 784 C LYS 50 -1.989 33.962 21.164 1.00 0.00 ATOM 785 O LYS 50 -2.239 33.167 22.073 1.00 0.00 ATOM 804 N ALA 51 -2.312 33.733 19.889 1.00 0.00 ATOM 805 CA ALA 51 -3.046 32.546 19.492 1.00 0.00 ATOM 806 C ALA 51 -2.294 31.283 19.812 1.00 0.00 ATOM 807 O ALA 51 -2.859 30.345 20.391 1.00 0.00 ATOM 814 N VAL 52 -0.996 31.290 19.565 1.00 0.00 ATOM 815 CA VAL 52 -0.232 30.095 19.844 1.00 0.00 ATOM 816 C VAL 52 -0.042 29.878 21.334 1.00 0.00 ATOM 817 O VAL 52 0.030 28.733 21.792 1.00 0.00 ATOM 830 N HIS 53 -0.029 30.967 22.104 1.00 0.00 ATOM 831 CA HIS 53 0.127 30.880 23.549 1.00 0.00 ATOM 832 C HIS 53 -1.102 30.199 24.154 1.00 0.00 ATOM 833 O HIS 53 -0.992 29.425 25.107 1.00 0.00 ATOM 847 N VAL 54 -2.261 30.461 23.554 1.00 0.00 ATOM 848 CA VAL 54 -3.541 29.878 23.956 1.00 0.00 ATOM 849 C VAL 54 -3.606 28.393 23.597 1.00 0.00 ATOM 850 O VAL 54 -4.120 27.577 24.360 1.00 0.00 ATOM 863 N LEU 55 -3.110 28.071 22.407 1.00 0.00 ATOM 864 CA LEU 55 -3.147 26.734 21.832 1.00 0.00 ATOM 865 C LEU 55 -1.927 25.831 22.000 1.00 0.00 ATOM 866 O LEU 55 -1.897 24.748 21.418 1.00 0.00 ATOM 882 N GLU 56 -0.936 26.256 22.774 1.00 0.00 ATOM 883 CA GLU 56 0.302 25.483 22.993 1.00 0.00 ATOM 884 C GLU 56 1.060 25.180 21.690 1.00 0.00 ATOM 885 O GLU 56 1.630 24.098 21.518 1.00 0.00 ATOM 897 N LEU 57 1.072 26.148 20.787 1.00 0.00 ATOM 898 CA LEU 57 1.753 26.035 19.501 1.00 0.00 ATOM 899 C LEU 57 3.045 26.852 19.409 1.00 0.00 ATOM 900 O LEU 57 3.242 27.826 20.130 1.00 0.00 ATOM 916 N ASN 58 3.939 26.450 18.518 1.00 0.00 ATOM 917 CA ASN 58 5.180 27.184 18.304 1.00 0.00 ATOM 918 C ASN 58 4.966 28.445 17.436 1.00 0.00 ATOM 919 O ASN 58 4.684 28.322 16.246 1.00 0.00 ATOM 930 N PRO 59 5.199 29.671 17.949 1.00 0.00 ATOM 931 CA PRO 59 4.947 30.944 17.276 1.00 0.00 ATOM 932 C PRO 59 5.699 31.143 15.975 1.00 0.00 ATOM 933 O PRO 59 5.324 32.004 15.183 1.00 0.00 ATOM 944 N GLN 60 6.796 30.414 15.785 1.00 0.00 ATOM 945 CA GLN 60 7.608 30.568 14.590 1.00 0.00 ATOM 946 C GLN 60 7.270 29.557 13.502 1.00 0.00 ATOM 947 O GLN 60 7.836 29.606 12.408 1.00 0.00 ATOM 961 N ASP 61 6.373 28.617 13.810 1.00 0.00 ATOM 962 CA ASP 61 5.991 27.587 12.858 1.00 0.00 ATOM 963 C ASP 61 4.604 27.752 12.285 1.00 0.00 ATOM 964 O ASP 61 4.213 27.004 11.385 1.00 0.00 ATOM 973 N ILE 62 3.849 28.733 12.737 1.00 0.00 ATOM 974 CA ILE 62 2.483 28.712 12.290 1.00 0.00 ATOM 975 C ILE 62 2.407 29.051 10.798 1.00 0.00 ATOM 976 O ILE 62 1.704 28.351 10.073 1.00 0.00 ATOM 992 N PRO 63 3.099 30.099 10.275 1.00 0.00 ATOM 993 CA PRO 63 3.087 30.433 8.865 1.00 0.00 ATOM 994 C PRO 63 3.479 29.228 8.008 1.00 0.00 ATOM 995 O PRO 63 3.032 29.115 6.865 1.00 0.00 ATOM 1006 N LYS 64 4.298 28.319 8.564 1.00 0.00 ATOM 1007 CA LYS 64 4.697 27.137 7.839 1.00 0.00 ATOM 1008 C LYS 64 3.478 26.241 7.702 1.00 0.00 ATOM 1009 O LYS 64 3.207 25.681 6.642 1.00 0.00 ATOM 1028 N TYR 65 2.653 26.173 8.751 1.00 0.00 ATOM 1029 CA TYR 65 1.495 25.291 8.711 1.00 0.00 ATOM 1030 C TYR 65 0.605 25.718 7.563 1.00 0.00 ATOM 1031 O TYR 65 0.021 24.877 6.862 1.00 0.00 ATOM 1049 N PHE 66 0.532 27.040 7.386 1.00 0.00 ATOM 1050 CA PHE 66 -0.302 27.695 6.384 1.00 0.00 ATOM 1051 C PHE 66 0.242 27.601 4.943 1.00 0.00 ATOM 1052 O PHE 66 -0.505 27.299 4.009 1.00 0.00 ATOM 1069 N PHE 67 1.541 27.874 4.751 1.00 0.00 ATOM 1070 CA PHE 67 2.142 27.907 3.411 1.00 0.00 ATOM 1071 C PHE 67 3.157 26.845 2.997 1.00 0.00 ATOM 1072 O PHE 67 3.444 26.715 1.805 1.00 0.00 ATOM 1089 N ASN 68 3.812 26.175 3.935 1.00 0.00 ATOM 1090 CA ASN 68 4.889 25.282 3.540 1.00 0.00 ATOM 1091 C ASN 68 4.601 23.835 3.890 1.00 0.00 ATOM 1092 O ASN 68 4.730 22.946 3.049 1.00 0.00 ATOM 1103 N ALA 69 4.181 23.618 5.136 1.00 0.00 ATOM 1104 CA ALA 69 3.854 22.302 5.656 1.00 0.00 ATOM 1105 C ALA 69 2.594 21.807 4.987 1.00 0.00 ATOM 1106 O ALA 69 2.445 20.618 4.706 1.00 0.00 ATOM 1113 N LYS 70 1.698 22.760 4.724 1.00 0.00 ATOM 1114 CA LYS 70 0.402 22.529 4.112 1.00 0.00 ATOM 1115 C LYS 70 -0.404 21.501 4.896 1.00 0.00 ATOM 1116 O LYS 70 -0.927 20.536 4.335 1.00 0.00 TER END