####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 69 ( 276), selected 69 , name R0974s1TS433_3 # Molecule2: number of CA atoms 69 ( 556), selected 69 , name R0974s1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap R0974s1TS433_3.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 69 2 - 70 2.23 2.23 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 67 2 - 68 1.75 2.28 LCS_AVERAGE: 94.43 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 52 6 - 57 0.97 2.32 LONGEST_CONTINUOUS_SEGMENT: 52 7 - 58 0.96 2.30 LCS_AVERAGE: 63.43 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 69 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 2 S 2 8 67 69 3 13 44 54 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT Y 3 Y 3 35 67 69 7 34 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT D 4 D 4 35 67 69 10 33 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT Y 5 Y 5 35 67 69 4 28 47 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT S 6 S 6 52 67 69 9 16 38 54 60 63 64 64 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT S 7 S 7 52 67 69 9 23 44 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT L 8 L 8 52 67 69 9 24 47 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT L 9 L 9 52 67 69 9 32 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT G 10 G 10 52 67 69 9 33 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT K 11 K 11 52 67 69 14 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT I 12 I 12 52 67 69 14 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT T 13 T 13 52 67 69 14 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT E 14 E 14 52 67 69 14 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT K 15 K 15 52 67 69 14 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT C 16 C 16 52 67 69 13 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT G 17 G 17 52 67 69 13 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT T 18 T 18 52 67 69 7 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT Q 19 Q 19 52 67 69 10 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT Y 20 Y 20 52 67 69 19 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT N 21 N 21 52 67 69 19 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT F 22 F 22 52 67 69 19 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT A 23 A 23 52 67 69 19 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT I 24 I 24 52 67 69 19 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT A 25 A 25 52 67 69 19 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT M 26 M 26 52 67 69 10 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT G 27 G 27 52 67 69 19 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT L 28 L 28 52 67 69 19 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT S 29 S 29 52 67 69 10 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT E 30 E 30 52 67 69 10 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT R 31 R 31 52 67 69 19 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT T 32 T 32 52 67 69 19 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT V 33 V 33 52 67 69 19 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT S 34 S 34 52 67 69 19 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT L 35 L 35 52 67 69 19 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT K 36 K 36 52 67 69 19 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT L 37 L 37 52 67 69 17 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT N 38 N 38 52 67 69 19 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT D 39 D 39 52 67 69 6 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT K 40 K 40 52 67 69 19 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT V 41 V 41 52 67 69 19 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT T 42 T 42 52 67 69 5 44 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT W 43 W 43 52 67 69 8 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT K 44 K 44 52 67 69 19 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT D 45 D 45 52 67 69 19 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT D 46 D 46 52 67 69 19 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT E 47 E 47 52 67 69 9 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT I 48 I 48 52 67 69 13 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT L 49 L 49 52 67 69 13 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT K 50 K 50 52 67 69 13 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT A 51 A 51 52 67 69 13 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT V 52 V 52 52 67 69 8 25 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT H 53 H 53 52 67 69 13 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT V 54 V 54 52 67 69 13 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT L 55 L 55 52 67 69 14 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT E 56 E 56 52 67 69 14 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT L 57 L 57 52 67 69 13 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT N 58 N 58 52 67 69 4 11 31 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT P 59 P 59 50 67 69 4 10 15 52 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT Q 60 Q 60 12 67 69 4 8 15 31 52 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT D 61 D 61 12 67 69 4 10 30 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT I 62 I 62 12 67 69 4 14 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT P 63 P 63 12 67 69 4 16 46 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT K 64 K 64 11 67 69 4 8 11 45 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT Y 65 Y 65 11 67 69 4 8 11 13 41 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT F 66 F 66 11 67 69 3 6 11 13 18 54 59 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT F 67 F 67 7 67 69 3 5 11 13 41 54 59 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT N 68 N 68 7 67 69 3 5 11 13 16 30 58 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT A 69 A 69 3 4 69 3 3 4 4 4 8 10 13 19 24 27 43 67 69 69 69 69 69 69 69 LCS_GDT K 70 K 70 3 3 69 0 3 3 3 3 12 14 19 62 65 68 68 68 69 69 69 69 69 69 69 LCS_AVERAGE LCS_A: 85.96 ( 63.43 94.43 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 19 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 GDT PERCENT_AT 27.54 65.22 75.36 84.06 86.96 91.30 92.75 95.65 97.10 97.10 98.55 98.55 98.55 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.30 0.72 0.88 1.11 1.20 1.37 1.44 1.73 1.75 1.75 1.97 1.97 1.97 2.23 2.23 2.23 2.23 2.23 2.23 2.23 GDT RMS_ALL_AT 2.37 2.31 2.32 2.34 2.31 2.34 2.33 2.28 2.28 2.28 2.25 2.25 2.25 2.23 2.23 2.23 2.23 2.23 2.23 2.23 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 2 S 2 2.192 2 0.112 0.112 2.605 49.091 32.727 - LGA Y 3 Y 3 1.256 8 0.068 0.068 1.909 61.818 20.606 - LGA D 4 D 4 1.615 4 0.068 0.068 1.661 58.182 29.091 - LGA Y 5 Y 5 2.163 8 0.031 0.031 2.546 38.636 12.879 - LGA S 6 S 6 2.782 2 0.140 0.140 2.782 32.727 21.818 - LGA S 7 S 7 2.203 2 0.127 0.127 2.500 44.545 29.697 - LGA L 8 L 8 1.848 4 0.066 0.066 2.118 51.364 25.682 - LGA L 9 L 9 1.600 4 0.014 0.014 1.765 58.182 29.091 - LGA G 10 G 10 1.351 0 0.031 0.031 1.445 73.636 73.636 - LGA K 11 K 11 0.662 5 0.047 0.047 0.870 81.818 36.364 - LGA I 12 I 12 0.752 4 0.021 0.021 0.770 81.818 40.909 - LGA T 13 T 13 0.647 3 0.021 0.021 0.806 81.818 46.753 - LGA E 14 E 14 0.710 5 0.053 0.053 0.768 81.818 36.364 - LGA K 15 K 15 0.873 5 0.181 0.181 0.873 81.818 36.364 - LGA C 16 C 16 0.894 2 0.071 0.071 0.979 81.818 54.545 - LGA G 17 G 17 0.829 0 0.397 0.397 2.109 70.909 70.909 - LGA T 18 T 18 0.648 3 0.053 0.053 0.679 81.818 46.753 - LGA Q 19 Q 19 1.009 5 0.030 0.030 1.024 73.636 32.727 - LGA Y 20 Y 20 0.801 8 0.014 0.014 0.839 81.818 27.273 - LGA N 21 N 21 0.887 4 0.026 0.026 0.887 81.818 40.909 - LGA F 22 F 22 0.806 7 0.066 0.066 0.927 81.818 29.752 - LGA A 23 A 23 0.832 1 0.030 0.030 0.851 81.818 65.455 - LGA I 24 I 24 0.725 4 0.021 0.021 0.770 81.818 40.909 - LGA A 25 A 25 0.920 1 0.023 0.023 0.989 81.818 65.455 - LGA M 26 M 26 1.045 4 0.077 0.077 1.045 77.727 38.864 - LGA G 27 G 27 0.598 0 0.022 0.022 0.767 90.909 90.909 - LGA L 28 L 28 0.374 4 0.028 0.028 0.532 95.455 47.727 - LGA S 29 S 29 0.722 2 0.013 0.013 0.811 86.364 57.576 - LGA E 30 E 30 0.966 5 0.040 0.040 1.125 73.636 32.727 - LGA R 31 R 31 1.044 7 0.043 0.043 1.067 69.545 25.289 - LGA T 32 T 32 0.984 3 0.039 0.039 1.130 77.727 44.416 - LGA V 33 V 33 0.795 3 0.043 0.043 0.899 81.818 46.753 - LGA S 34 S 34 0.908 2 0.028 0.028 0.920 81.818 54.545 - LGA L 35 L 35 0.845 4 0.046 0.046 1.023 77.727 38.864 - LGA K 36 K 36 0.716 5 0.082 0.082 1.170 77.727 34.545 - LGA L 37 L 37 0.757 4 0.080 0.080 0.892 81.818 40.909 - LGA N 38 N 38 1.054 4 0.034 0.034 1.311 69.545 34.773 - LGA D 39 D 39 1.171 4 0.018 0.018 1.178 65.455 32.727 - LGA K 40 K 40 1.038 5 0.036 0.036 1.139 65.455 29.091 - LGA V 41 V 41 1.071 3 0.129 0.129 1.310 69.545 39.740 - LGA T 42 T 42 1.531 3 0.052 0.052 1.531 61.818 35.325 - LGA W 43 W 43 1.063 10 0.038 0.038 1.259 73.636 21.039 - LGA K 44 K 44 0.912 5 0.036 0.036 0.930 81.818 36.364 - LGA D 45 D 45 1.065 4 0.132 0.132 1.129 69.545 34.773 - LGA D 46 D 46 0.820 4 0.048 0.048 0.820 81.818 40.909 - LGA E 47 E 47 0.487 5 0.012 0.012 0.487 100.000 44.444 - LGA I 48 I 48 0.642 4 0.090 0.090 0.757 86.364 43.182 - LGA L 49 L 49 0.905 4 0.042 0.042 1.150 77.727 38.864 - LGA K 50 K 50 0.528 5 0.025 0.025 0.638 81.818 36.364 - LGA A 51 A 51 0.803 1 0.049 0.049 1.298 73.636 58.909 - LGA V 52 V 52 1.537 3 0.046 0.046 1.561 58.182 33.247 - LGA H 53 H 53 1.034 6 0.078 0.078 1.227 73.636 29.455 - LGA V 54 V 54 1.006 3 0.034 0.034 1.085 69.545 39.740 - LGA L 55 L 55 0.847 4 0.053 0.053 1.017 77.727 38.864 - LGA E 56 E 56 1.198 5 0.022 0.022 1.198 69.545 30.909 - LGA L 57 L 57 0.617 4 0.047 0.047 1.416 73.636 36.818 - LGA N 58 N 58 2.058 4 0.106 0.106 2.326 45.000 22.500 - LGA P 59 P 59 3.214 3 0.043 0.043 3.710 16.818 9.610 - LGA Q 60 Q 60 4.140 5 0.080 0.080 4.140 11.364 5.051 - LGA D 61 D 61 2.356 4 0.027 0.027 2.880 49.091 24.545 - LGA I 62 I 62 1.649 4 0.057 0.057 1.654 58.182 29.091 - LGA P 63 P 63 2.252 3 0.052 0.052 2.252 51.818 29.610 - LGA K 64 K 64 2.861 5 0.178 0.178 3.945 29.091 12.929 - LGA Y 65 Y 65 3.526 8 0.048 0.048 5.399 13.636 4.545 - LGA F 66 F 66 4.497 7 0.176 0.176 6.095 4.545 1.653 - LGA F 67 F 67 4.282 7 0.242 0.242 4.282 6.818 2.479 - LGA N 68 N 68 5.406 4 0.579 0.579 8.507 0.455 0.227 - LGA A 69 A 69 9.551 1 0.612 0.612 9.551 0.000 0.000 - LGA K 70 K 70 7.786 5 0.528 0.528 9.720 0.000 0.000 - # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 69 276 276 100.00 556 276 49.64 69 0 SUMMARY(RMSD_GDC): 2.233 2.260 2.260 63.999 34.458 0.000 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 69 69 4.0 66 1.73 86.232 90.453 3.602 LGA_LOCAL RMSD: 1.732 Number of atoms: 66 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 2.277 Number of assigned atoms: 69 Std_ASGN_ATOMS RMSD: 2.233 Standard rmsd on all 69 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.931699 * X + 0.351987 * Y + -0.089679 * Z + -2.660060 Y_new = 0.292275 * X + -0.579893 * Y + 0.760460 * Z + 32.118114 Z_new = 0.215668 * X + -0.734731 * Y + -0.643163 * Z + -1.274447 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.303979 -0.217376 -2.289837 [DEG: 17.4167 -12.4547 -131.1980 ] ZXZ: -3.024207 2.269418 2.856079 [DEG: -173.2743 130.0281 163.6413 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: R0974s1TS433_3 REMARK 2: R0974s1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap R0974s1TS433_3.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 69 69 4.0 66 1.73 90.453 2.23 REMARK ---------------------------------------------------------- MOLECULE R0974s1TS433_3 PFRMAT TS TARGET R0974s1 MODEL 3 PARENT N/A ATOM 20 N SER 2 -2.660 32.118 -1.274 1.00 0.00 ATOM 21 CA SER 2 -3.981 32.175 -0.658 1.00 0.00 ATOM 22 C SER 2 -3.856 31.729 0.786 1.00 0.00 ATOM 23 O SER 2 -3.043 30.857 1.092 1.00 0.00 ATOM 31 N TYR 3 -4.667 32.303 1.658 1.00 0.00 ATOM 32 CA TYR 3 -4.660 31.948 3.070 1.00 0.00 ATOM 33 C TYR 3 -5.533 30.748 3.367 1.00 0.00 ATOM 34 O TYR 3 -6.526 30.519 2.680 1.00 0.00 ATOM 52 N ASP 4 -5.133 29.982 4.379 1.00 0.00 ATOM 53 CA ASP 4 -5.895 28.858 4.914 1.00 0.00 ATOM 54 C ASP 4 -5.626 28.760 6.401 1.00 0.00 ATOM 55 O ASP 4 -4.629 28.176 6.816 1.00 0.00 ATOM 64 N TYR 5 -6.558 29.251 7.192 1.00 0.00 ATOM 65 CA TYR 5 -6.400 29.346 8.636 1.00 0.00 ATOM 66 C TYR 5 -7.060 28.194 9.396 1.00 0.00 ATOM 67 O TYR 5 -7.223 28.242 10.632 1.00 0.00 ATOM 85 N SER 6 -7.416 27.147 8.661 1.00 0.00 ATOM 86 CA SER 6 -8.103 25.998 9.216 1.00 0.00 ATOM 87 C SER 6 -7.307 25.259 10.289 1.00 0.00 ATOM 88 O SER 6 -7.914 24.616 11.144 1.00 0.00 ATOM 96 N SER 7 -5.965 25.341 10.290 1.00 0.00 ATOM 97 CA SER 7 -5.185 24.653 11.313 1.00 0.00 ATOM 98 C SER 7 -5.314 25.337 12.653 1.00 0.00 ATOM 99 O SER 7 -5.062 24.725 13.705 1.00 0.00 ATOM 107 N LEU 8 -5.725 26.609 12.659 1.00 0.00 ATOM 108 CA LEU 8 -5.827 27.261 13.926 1.00 0.00 ATOM 109 C LEU 8 -7.130 26.746 14.514 1.00 0.00 ATOM 110 O LEU 8 -7.188 26.392 15.689 1.00 0.00 ATOM 126 N LEU 9 -8.153 26.609 13.648 1.00 0.00 ATOM 127 CA LEU 9 -9.464 26.107 14.077 1.00 0.00 ATOM 128 C LEU 9 -9.370 24.676 14.560 1.00 0.00 ATOM 129 O LEU 9 -10.070 24.265 15.494 1.00 0.00 ATOM 145 N GLY 10 -8.531 23.901 13.899 1.00 0.00 ATOM 146 CA GLY 10 -8.349 22.507 14.245 1.00 0.00 ATOM 147 C GLY 10 -7.907 22.370 15.703 1.00 0.00 ATOM 148 O GLY 10 -8.531 21.653 16.497 1.00 0.00 ATOM 152 N LYS 11 -6.879 23.129 16.086 1.00 0.00 ATOM 153 CA LYS 11 -6.405 23.040 17.465 1.00 0.00 ATOM 154 C LYS 11 -7.427 23.662 18.437 1.00 0.00 ATOM 155 O LYS 11 -7.531 23.222 19.588 1.00 0.00 ATOM 174 N ILE 12 -8.167 24.681 17.993 1.00 0.00 ATOM 175 CA ILE 12 -9.199 25.321 18.815 1.00 0.00 ATOM 176 C ILE 12 -10.254 24.306 19.174 1.00 0.00 ATOM 177 O ILE 12 -10.649 24.195 20.338 1.00 0.00 ATOM 193 N THR 13 -10.685 23.515 18.198 1.00 0.00 ATOM 194 CA THR 13 -11.681 22.503 18.491 1.00 0.00 ATOM 195 C THR 13 -11.174 21.580 19.607 1.00 0.00 ATOM 196 O THR 13 -11.932 21.269 20.529 1.00 0.00 ATOM 207 N GLU 14 -9.902 21.155 19.547 1.00 0.00 ATOM 208 CA GLU 14 -9.363 20.269 20.586 1.00 0.00 ATOM 209 C GLU 14 -9.140 20.917 21.979 1.00 0.00 ATOM 210 O GLU 14 -9.380 20.274 23.005 1.00 0.00 ATOM 222 N LYS 15 -8.673 22.173 22.021 1.00 0.00 ATOM 223 CA LYS 15 -8.333 22.851 23.284 1.00 0.00 ATOM 224 C LYS 15 -9.375 23.785 23.898 1.00 0.00 ATOM 225 O LYS 15 -9.314 24.076 25.094 1.00 0.00 ATOM 244 N CYS 16 -10.277 24.310 23.095 1.00 0.00 ATOM 245 CA CYS 16 -11.260 25.278 23.571 1.00 0.00 ATOM 246 C CYS 16 -12.686 24.751 23.363 1.00 0.00 ATOM 247 O CYS 16 -13.590 24.972 24.183 1.00 0.00 ATOM 255 N GLY 17 -12.887 24.093 22.219 1.00 0.00 ATOM 256 CA GLY 17 -14.158 23.518 21.791 1.00 0.00 ATOM 257 C GLY 17 -14.978 24.472 20.938 1.00 0.00 ATOM 258 O GLY 17 -15.951 24.078 20.290 1.00 0.00 ATOM 262 N THR 18 -14.590 25.732 20.964 1.00 0.00 ATOM 263 CA THR 18 -15.258 26.786 20.236 1.00 0.00 ATOM 264 C THR 18 -14.408 28.028 20.107 1.00 0.00 ATOM 265 O THR 18 -13.631 28.372 21.019 1.00 0.00 ATOM 276 N GLN 19 -14.662 28.761 19.023 1.00 0.00 ATOM 277 CA GLN 19 -14.004 30.023 18.742 1.00 0.00 ATOM 278 C GLN 19 -14.258 30.988 19.866 1.00 0.00 ATOM 279 O GLN 19 -13.398 31.789 20.205 1.00 0.00 ATOM 293 N TYR 20 -15.402 30.839 20.513 1.00 0.00 ATOM 294 CA TYR 20 -15.779 31.676 21.626 1.00 0.00 ATOM 295 C TYR 20 -14.772 31.673 22.771 1.00 0.00 ATOM 296 O TYR 20 -14.496 32.735 23.333 1.00 0.00 ATOM 314 N ASN 21 -14.301 30.492 23.172 1.00 0.00 ATOM 315 CA ASN 21 -13.426 30.373 24.332 1.00 0.00 ATOM 316 C ASN 21 -12.031 30.805 23.962 1.00 0.00 ATOM 317 O ASN 21 -11.314 31.454 24.735 1.00 0.00 ATOM 328 N PHE 22 -11.679 30.506 22.727 1.00 0.00 ATOM 329 CA PHE 22 -10.399 30.892 22.194 1.00 0.00 ATOM 330 C PHE 22 -10.342 32.410 22.200 1.00 0.00 ATOM 331 O PHE 22 -9.440 33.025 22.777 1.00 0.00 ATOM 348 N ALA 23 -11.399 33.021 21.676 1.00 0.00 ATOM 349 CA ALA 23 -11.482 34.453 21.593 1.00 0.00 ATOM 350 C ALA 23 -11.349 35.083 22.966 1.00 0.00 ATOM 351 O ALA 23 -10.498 35.955 23.159 1.00 0.00 ATOM 358 N ILE 24 -11.991 34.505 23.986 1.00 0.00 ATOM 359 CA ILE 24 -11.868 35.082 25.315 1.00 0.00 ATOM 360 C ILE 24 -10.432 35.061 25.775 1.00 0.00 ATOM 361 O ILE 24 -9.921 36.064 26.270 1.00 0.00 ATOM 377 N ALA 25 -9.758 33.934 25.583 1.00 0.00 ATOM 378 CA ALA 25 -8.379 33.804 26.017 1.00 0.00 ATOM 379 C ALA 25 -7.471 34.856 25.364 1.00 0.00 ATOM 380 O ALA 25 -6.510 35.325 25.980 1.00 0.00 ATOM 387 N MET 26 -7.773 35.227 24.117 1.00 0.00 ATOM 388 CA MET 26 -6.994 36.214 23.379 1.00 0.00 ATOM 389 C MET 26 -7.452 37.660 23.564 1.00 0.00 ATOM 390 O MET 26 -6.869 38.574 22.970 1.00 0.00 ATOM 404 N GLY 27 -8.551 37.882 24.278 1.00 0.00 ATOM 405 CA GLY 27 -9.085 39.231 24.402 1.00 0.00 ATOM 406 C GLY 27 -9.836 39.702 23.142 1.00 0.00 ATOM 407 O GLY 27 -9.936 40.907 22.890 1.00 0.00 ATOM 411 N LEU 28 -10.321 38.761 22.324 1.00 0.00 ATOM 412 CA LEU 28 -11.023 39.072 21.083 1.00 0.00 ATOM 413 C LEU 28 -12.490 38.678 21.173 1.00 0.00 ATOM 414 O LEU 28 -12.854 37.778 21.920 1.00 0.00 ATOM 430 N SER 29 -13.350 39.300 20.377 1.00 0.00 ATOM 431 CA SER 29 -14.727 38.798 20.321 1.00 0.00 ATOM 432 C SER 29 -14.758 37.535 19.453 1.00 0.00 ATOM 433 O SER 29 -13.854 37.349 18.626 1.00 0.00 ATOM 441 N GLU 30 -15.813 36.709 19.568 1.00 0.00 ATOM 442 CA GLU 30 -15.892 35.466 18.791 1.00 0.00 ATOM 443 C GLU 30 -15.999 35.698 17.289 1.00 0.00 ATOM 444 O GLU 30 -15.582 34.849 16.497 1.00 0.00 ATOM 456 N ARG 31 -16.502 36.871 16.907 1.00 0.00 ATOM 457 CA ARG 31 -16.636 37.258 15.518 1.00 0.00 ATOM 458 C ARG 31 -15.270 37.556 14.938 1.00 0.00 ATOM 459 O ARG 31 -15.037 37.340 13.744 1.00 0.00 ATOM 480 N THR 32 -14.397 38.113 15.775 1.00 0.00 ATOM 481 CA THR 32 -13.082 38.541 15.366 1.00 0.00 ATOM 482 C THR 32 -12.325 37.314 14.953 1.00 0.00 ATOM 483 O THR 32 -11.660 37.299 13.913 1.00 0.00 ATOM 494 N VAL 33 -12.460 36.261 15.758 1.00 0.00 ATOM 495 CA VAL 33 -11.773 35.033 15.442 1.00 0.00 ATOM 496 C VAL 33 -12.337 34.395 14.206 1.00 0.00 ATOM 497 O VAL 33 -11.584 34.077 13.288 1.00 0.00 ATOM 510 N SER 34 -13.653 34.320 14.098 1.00 0.00 ATOM 511 CA SER 34 -14.212 33.642 12.954 1.00 0.00 ATOM 512 C SER 34 -13.729 34.267 11.658 1.00 0.00 ATOM 513 O SER 34 -13.247 33.561 10.772 1.00 0.00 ATOM 521 N LEU 35 -13.735 35.587 11.553 1.00 0.00 ATOM 522 CA LEU 35 -13.300 36.184 10.304 1.00 0.00 ATOM 523 C LEU 35 -11.815 35.901 10.035 1.00 0.00 ATOM 524 O LEU 35 -11.420 35.646 8.879 1.00 0.00 ATOM 540 N LYS 36 -10.994 35.901 11.099 1.00 0.00 ATOM 541 CA LYS 36 -9.562 35.644 10.982 1.00 0.00 ATOM 542 C LYS 36 -9.254 34.180 10.658 1.00 0.00 ATOM 543 O LYS 36 -8.222 33.897 10.060 1.00 0.00 ATOM 562 N LEU 37 -10.120 33.233 11.052 1.00 0.00 ATOM 563 CA LEU 37 -9.855 31.841 10.689 1.00 0.00 ATOM 564 C LEU 37 -10.742 31.287 9.559 1.00 0.00 ATOM 565 O LEU 37 -10.511 30.173 9.092 1.00 0.00 ATOM 581 N ASN 38 -11.685 32.094 9.041 1.00 0.00 ATOM 582 CA ASN 38 -12.541 31.707 7.913 1.00 0.00 ATOM 583 C ASN 38 -12.090 32.366 6.615 1.00 0.00 ATOM 584 O ASN 38 -12.856 32.437 5.646 1.00 0.00 ATOM 595 N ASP 39 -10.835 32.810 6.616 1.00 0.00 ATOM 596 CA ASP 39 -10.138 33.458 5.514 1.00 0.00 ATOM 597 C ASP 39 -10.790 34.736 4.989 1.00 0.00 ATOM 598 O ASP 39 -10.766 34.993 3.783 1.00 0.00 ATOM 607 N LYS 40 -11.310 35.579 5.880 1.00 0.00 ATOM 608 CA LYS 40 -11.884 36.846 5.434 1.00 0.00 ATOM 609 C LYS 40 -10.932 37.995 5.772 1.00 0.00 ATOM 610 O LYS 40 -10.855 39.001 5.067 1.00 0.00 ATOM 629 N VAL 41 -10.265 37.860 6.906 1.00 0.00 ATOM 630 CA VAL 41 -9.293 38.843 7.400 1.00 0.00 ATOM 631 C VAL 41 -8.048 38.092 7.885 1.00 0.00 ATOM 632 O VAL 41 -8.094 36.883 8.070 1.00 0.00 ATOM 645 N THR 42 -6.937 38.782 8.103 1.00 0.00 ATOM 646 CA THR 42 -5.743 38.101 8.607 1.00 0.00 ATOM 647 C THR 42 -5.447 38.360 10.090 1.00 0.00 ATOM 648 O THR 42 -6.000 39.271 10.717 1.00 0.00 ATOM 659 N TRP 43 -4.535 37.560 10.644 1.00 0.00 ATOM 660 CA TRP 43 -4.059 37.717 12.024 1.00 0.00 ATOM 661 C TRP 43 -2.939 38.747 12.094 1.00 0.00 ATOM 662 O TRP 43 -2.087 38.792 11.209 1.00 0.00 ATOM 683 N LYS 44 -2.916 39.558 13.148 1.00 0.00 ATOM 684 CA LYS 44 -1.828 40.516 13.327 1.00 0.00 ATOM 685 C LYS 44 -0.612 39.816 13.907 1.00 0.00 ATOM 686 O LYS 44 -0.725 38.815 14.622 1.00 0.00 ATOM 705 N ASP 45 0.555 40.437 13.774 1.00 0.00 ATOM 706 CA ASP 45 1.765 39.842 14.332 1.00 0.00 ATOM 707 C ASP 45 1.639 39.535 15.828 1.00 0.00 ATOM 708 O ASP 45 2.228 38.576 16.311 1.00 0.00 ATOM 717 N ASP 46 0.915 40.359 16.588 1.00 0.00 ATOM 718 CA ASP 46 0.799 40.085 18.015 1.00 0.00 ATOM 719 C ASP 46 -0.361 39.128 18.310 1.00 0.00 ATOM 720 O ASP 46 -0.279 38.274 19.202 1.00 0.00 ATOM 729 N GLU 47 -1.431 39.219 17.516 1.00 0.00 ATOM 730 CA GLU 47 -2.593 38.375 17.724 1.00 0.00 ATOM 731 C GLU 47 -2.273 36.919 17.450 1.00 0.00 ATOM 732 O GLU 47 -2.706 36.049 18.194 1.00 0.00 ATOM 744 N ILE 48 -1.481 36.634 16.421 1.00 0.00 ATOM 745 CA ILE 48 -1.206 35.237 16.148 1.00 0.00 ATOM 746 C ILE 48 -0.384 34.631 17.283 1.00 0.00 ATOM 747 O ILE 48 -0.515 33.442 17.583 1.00 0.00 ATOM 763 N LEU 49 0.459 35.433 17.918 1.00 0.00 ATOM 764 CA LEU 49 1.247 34.924 19.022 1.00 0.00 ATOM 765 C LEU 49 0.328 34.611 20.195 1.00 0.00 ATOM 766 O LEU 49 0.454 33.568 20.842 1.00 0.00 ATOM 782 N LYS 50 -0.672 35.453 20.426 1.00 0.00 ATOM 783 CA LYS 50 -1.587 35.129 21.503 1.00 0.00 ATOM 784 C LYS 50 -2.306 33.822 21.182 1.00 0.00 ATOM 785 O LYS 50 -2.584 33.018 22.073 1.00 0.00 ATOM 804 N ALA 51 -2.611 33.618 19.898 1.00 0.00 ATOM 805 CA ALA 51 -3.360 32.450 19.470 1.00 0.00 ATOM 806 C ALA 51 -2.625 31.170 19.765 1.00 0.00 ATOM 807 O ALA 51 -3.211 30.219 20.300 1.00 0.00 ATOM 814 N VAL 52 -1.323 31.174 19.548 1.00 0.00 ATOM 815 CA VAL 52 -0.575 29.963 19.804 1.00 0.00 ATOM 816 C VAL 52 -0.395 29.711 21.290 1.00 0.00 ATOM 817 O VAL 52 -0.318 28.556 21.720 1.00 0.00 ATOM 830 N HIS 53 -0.397 30.780 22.086 1.00 0.00 ATOM 831 CA HIS 53 -0.252 30.659 23.530 1.00 0.00 ATOM 832 C HIS 53 -1.495 29.981 24.111 1.00 0.00 ATOM 833 O HIS 53 -1.401 29.191 25.053 1.00 0.00 ATOM 847 N VAL 54 -2.645 30.263 23.503 1.00 0.00 ATOM 848 CA VAL 54 -3.934 29.687 23.883 1.00 0.00 ATOM 849 C VAL 54 -4.020 28.216 23.473 1.00 0.00 ATOM 850 O VAL 54 -4.536 27.380 24.214 1.00 0.00 ATOM 863 N LEU 55 -3.542 27.930 22.268 1.00 0.00 ATOM 864 CA LEU 55 -3.601 26.615 21.646 1.00 0.00 ATOM 865 C LEU 55 -2.398 25.684 21.787 1.00 0.00 ATOM 866 O LEU 55 -2.396 24.611 21.185 1.00 0.00 ATOM 882 N GLU 56 -1.391 26.075 22.559 1.00 0.00 ATOM 883 CA GLU 56 -0.168 25.273 22.753 1.00 0.00 ATOM 884 C GLU 56 0.572 24.977 21.438 1.00 0.00 ATOM 885 O GLU 56 1.098 23.880 21.233 1.00 0.00 ATOM 897 N LEU 57 0.617 25.970 20.564 1.00 0.00 ATOM 898 CA LEU 57 1.288 25.866 19.270 1.00 0.00 ATOM 899 C LEU 57 2.620 26.617 19.202 1.00 0.00 ATOM 900 O LEU 57 2.870 27.555 19.955 1.00 0.00 ATOM 916 N ASN 58 3.489 26.201 18.294 1.00 0.00 ATOM 917 CA ASN 58 4.767 26.877 18.099 1.00 0.00 ATOM 918 C ASN 58 4.617 28.177 17.277 1.00 0.00 ATOM 919 O ASN 58 4.346 28.110 16.080 1.00 0.00 ATOM 930 N PRO 59 4.891 29.372 17.839 1.00 0.00 ATOM 931 CA PRO 59 4.701 30.679 17.212 1.00 0.00 ATOM 932 C PRO 59 5.478 30.895 15.928 1.00 0.00 ATOM 933 O PRO 59 5.149 31.799 15.164 1.00 0.00 ATOM 944 N GLN 60 6.547 30.129 15.723 1.00 0.00 ATOM 945 CA GLN 60 7.380 30.293 14.544 1.00 0.00 ATOM 946 C GLN 60 7.034 29.317 13.426 1.00 0.00 ATOM 947 O GLN 60 7.603 29.395 12.335 1.00 0.00 ATOM 961 N ASP 61 6.128 28.377 13.704 1.00 0.00 ATOM 962 CA ASP 61 5.738 27.380 12.721 1.00 0.00 ATOM 963 C ASP 61 4.352 27.572 12.156 1.00 0.00 ATOM 964 O ASP 61 3.954 26.856 11.234 1.00 0.00 ATOM 973 N ILE 62 3.604 28.544 12.640 1.00 0.00 ATOM 974 CA ILE 62 2.237 28.545 12.195 1.00 0.00 ATOM 975 C ILE 62 2.160 28.933 10.715 1.00 0.00 ATOM 976 O ILE 62 1.442 28.268 9.972 1.00 0.00 ATOM 992 N PRO 63 2.869 29.982 10.220 1.00 0.00 ATOM 993 CA PRO 63 2.857 30.360 8.821 1.00 0.00 ATOM 994 C PRO 63 3.223 29.174 7.926 1.00 0.00 ATOM 995 O PRO 63 2.770 29.106 6.783 1.00 0.00 ATOM 1006 N LYS 64 4.028 28.234 8.450 1.00 0.00 ATOM 1007 CA LYS 64 4.403 27.068 7.688 1.00 0.00 ATOM 1008 C LYS 64 3.167 26.201 7.529 1.00 0.00 ATOM 1009 O LYS 64 2.868 25.694 6.447 1.00 0.00 ATOM 1028 N TYR 65 2.359 26.094 8.587 1.00 0.00 ATOM 1029 CA TYR 65 1.184 25.233 8.526 1.00 0.00 ATOM 1030 C TYR 65 0.282 25.729 7.414 1.00 0.00 ATOM 1031 O TYR 65 -0.332 24.932 6.690 1.00 0.00 ATOM 1049 N PHE 66 0.236 27.059 7.295 1.00 0.00 ATOM 1050 CA PHE 66 -0.602 27.774 6.339 1.00 0.00 ATOM 1051 C PHE 66 -0.087 27.732 4.885 1.00 0.00 ATOM 1052 O PHE 66 -0.856 27.486 3.954 1.00 0.00 ATOM 1069 N PHE 67 1.216 27.984 4.680 1.00 0.00 ATOM 1070 CA PHE 67 1.791 28.062 3.331 1.00 0.00 ATOM 1071 C PHE 67 2.795 27.012 2.861 1.00 0.00 ATOM 1072 O PHE 67 3.059 26.923 1.660 1.00 0.00 ATOM 1089 N ASN 68 3.465 26.308 3.763 1.00 0.00 ATOM 1090 CA ASN 68 4.531 25.427 3.318 1.00 0.00 ATOM 1091 C ASN 68 4.233 23.967 3.597 1.00 0.00 ATOM 1092 O ASN 68 4.328 23.123 2.706 1.00 0.00 ATOM 1103 N ALA 69 3.841 23.689 4.840 1.00 0.00 ATOM 1104 CA ALA 69 3.507 22.349 5.296 1.00 0.00 ATOM 1105 C ALA 69 2.225 21.907 4.634 1.00 0.00 ATOM 1106 O ALA 69 2.052 20.738 4.294 1.00 0.00 ATOM 1113 N LYS 70 1.336 22.884 4.445 1.00 0.00 ATOM 1114 CA LYS 70 0.023 22.702 3.855 1.00 0.00 ATOM 1115 C LYS 70 -0.787 21.664 4.618 1.00 0.00 ATOM 1116 O LYS 70 -1.344 20.730 4.034 1.00 0.00 TER END