####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 69 ( 276), selected 69 , name R0974s1TS433_2 # Molecule2: number of CA atoms 69 ( 556), selected 69 , name R0974s1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap R0974s1TS433_2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 69 2 - 70 2.22 2.22 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 67 2 - 68 1.74 2.27 LCS_AVERAGE: 94.43 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 53 5 - 57 1.00 2.31 LCS_AVERAGE: 65.32 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 69 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 2 S 2 27 67 69 3 11 43 54 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT Y 3 Y 3 35 67 69 8 36 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT D 4 D 4 35 67 69 10 33 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT Y 5 Y 5 53 67 69 4 28 47 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT S 6 S 6 53 67 69 9 16 23 54 60 63 64 64 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT S 7 S 7 53 67 69 9 16 44 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT L 8 L 8 53 67 69 9 16 50 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT L 9 L 9 53 67 69 9 30 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT G 10 G 10 53 67 69 9 33 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT K 11 K 11 53 67 69 14 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT I 12 I 12 53 67 69 14 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT T 13 T 13 53 67 69 14 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT E 14 E 14 53 67 69 14 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT K 15 K 15 53 67 69 14 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT C 16 C 16 53 67 69 13 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT G 17 G 17 53 67 69 13 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT T 18 T 18 53 67 69 7 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT Q 19 Q 19 53 67 69 10 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT Y 20 Y 20 53 67 69 20 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT N 21 N 21 53 67 69 20 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT F 22 F 22 53 67 69 20 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT A 23 A 23 53 67 69 20 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT I 24 I 24 53 67 69 20 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT A 25 A 25 53 67 69 20 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT M 26 M 26 53 67 69 10 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT G 27 G 27 53 67 69 20 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT L 28 L 28 53 67 69 20 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT S 29 S 29 53 67 69 20 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT E 30 E 30 53 67 69 10 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT R 31 R 31 53 67 69 20 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT T 32 T 32 53 67 69 20 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT V 33 V 33 53 67 69 20 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT S 34 S 34 53 67 69 20 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT L 35 L 35 53 67 69 20 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT K 36 K 36 53 67 69 20 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT L 37 L 37 53 67 69 17 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT N 38 N 38 53 67 69 20 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT D 39 D 39 53 67 69 6 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT K 40 K 40 53 67 69 20 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT V 41 V 41 53 67 69 20 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT T 42 T 42 53 67 69 5 44 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT W 43 W 43 53 67 69 8 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT K 44 K 44 53 67 69 20 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT D 45 D 45 53 67 69 20 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT D 46 D 46 53 67 69 20 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT E 47 E 47 53 67 69 9 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT I 48 I 48 53 67 69 13 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT L 49 L 49 53 67 69 13 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT K 50 K 50 53 67 69 13 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT A 51 A 51 53 67 69 13 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT V 52 V 52 53 67 69 8 24 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT H 53 H 53 53 67 69 13 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT V 54 V 54 53 67 69 13 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT L 55 L 55 53 67 69 14 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT E 56 E 56 53 67 69 14 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT L 57 L 57 53 67 69 13 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT N 58 N 58 52 67 69 4 11 31 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT P 59 P 59 51 67 69 4 10 15 52 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT Q 60 Q 60 12 67 69 4 8 15 31 52 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT D 61 D 61 12 67 69 4 10 31 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT I 62 I 62 12 67 69 4 14 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT P 63 P 63 12 67 69 4 16 45 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT K 64 K 64 11 67 69 4 8 11 47 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT Y 65 Y 65 11 67 69 4 8 11 13 41 62 64 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT F 66 F 66 11 67 69 3 6 11 13 18 54 59 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT F 67 F 67 7 67 69 3 5 11 13 41 54 59 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT N 68 N 68 7 67 69 3 5 11 13 16 34 58 66 67 67 68 68 68 69 69 69 69 69 69 69 LCS_GDT A 69 A 69 3 4 69 3 3 4 4 4 8 10 13 19 24 27 43 67 69 69 69 69 69 69 69 LCS_GDT K 70 K 70 3 3 69 0 3 3 3 3 12 14 19 62 66 68 68 68 69 69 69 69 69 69 69 LCS_AVERAGE LCS_A: 86.59 ( 65.32 94.43 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 20 45 52 58 60 63 64 66 67 67 68 68 68 69 69 69 69 69 69 69 GDT PERCENT_AT 28.99 65.22 75.36 84.06 86.96 91.30 92.75 95.65 97.10 97.10 98.55 98.55 98.55 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.32 0.71 0.87 1.10 1.20 1.36 1.43 1.72 1.74 1.74 1.96 1.96 1.96 2.22 2.22 2.22 2.22 2.22 2.22 2.22 GDT RMS_ALL_AT 2.36 2.30 2.31 2.32 2.30 2.33 2.32 2.27 2.27 2.27 2.24 2.24 2.24 2.22 2.22 2.22 2.22 2.22 2.22 2.22 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 2 S 2 2.241 2 0.112 0.112 2.668 49.091 32.727 - LGA Y 3 Y 3 1.213 8 0.068 0.068 1.893 61.818 20.606 - LGA D 4 D 4 1.568 4 0.068 0.068 1.619 58.182 29.091 - LGA Y 5 Y 5 2.129 8 0.031 0.031 2.518 38.636 12.879 - LGA S 6 S 6 2.747 2 0.140 0.140 2.747 35.455 23.636 - LGA S 7 S 7 2.173 2 0.128 0.128 2.468 44.545 29.697 - LGA L 8 L 8 1.831 4 0.066 0.066 2.095 51.364 25.682 - LGA L 9 L 9 1.580 4 0.013 0.013 1.745 62.273 31.136 - LGA G 10 G 10 1.323 0 0.030 0.030 1.419 73.636 73.636 - LGA K 11 K 11 0.650 5 0.047 0.047 0.848 81.818 36.364 - LGA I 12 I 12 0.754 4 0.022 0.022 0.775 81.818 40.909 - LGA T 13 T 13 0.637 3 0.020 0.020 0.801 81.818 46.753 - LGA E 14 E 14 0.704 5 0.053 0.053 0.767 81.818 36.364 - LGA K 15 K 15 0.880 5 0.181 0.181 0.880 81.818 36.364 - LGA C 16 C 16 0.899 2 0.072 0.072 0.984 81.818 54.545 - LGA G 17 G 17 0.830 0 0.398 0.398 2.111 70.909 70.909 - LGA T 18 T 18 0.645 3 0.053 0.053 0.675 81.818 46.753 - LGA Q 19 Q 19 1.003 5 0.030 0.030 1.016 73.636 32.727 - LGA Y 20 Y 20 0.784 8 0.014 0.014 0.828 81.818 27.273 - LGA N 21 N 21 0.879 4 0.026 0.026 0.879 81.818 40.909 - LGA F 22 F 22 0.806 7 0.067 0.067 0.928 81.818 29.752 - LGA A 23 A 23 0.825 1 0.030 0.030 0.842 81.818 65.455 - LGA I 24 I 24 0.711 4 0.021 0.021 0.756 81.818 40.909 - LGA A 25 A 25 0.918 1 0.023 0.023 0.994 81.818 65.455 - LGA M 26 M 26 1.050 4 0.077 0.077 1.050 77.727 38.864 - LGA G 27 G 27 0.604 0 0.023 0.023 0.772 90.909 90.909 - LGA L 28 L 28 0.363 4 0.029 0.029 0.518 95.455 47.727 - LGA S 29 S 29 0.707 2 0.013 0.013 0.797 86.364 57.576 - LGA E 30 E 30 0.951 5 0.039 0.039 1.111 73.636 32.727 - LGA R 31 R 31 1.029 7 0.044 0.044 1.053 73.636 26.777 - LGA T 32 T 32 0.972 3 0.039 0.039 1.116 77.727 44.416 - LGA V 33 V 33 0.783 3 0.043 0.043 0.886 81.818 46.753 - LGA S 34 S 34 0.896 2 0.028 0.028 0.913 81.818 54.545 - LGA L 35 L 35 0.834 4 0.046 0.046 1.014 77.727 38.864 - LGA K 36 K 36 0.714 5 0.082 0.082 1.174 77.727 34.545 - LGA L 37 L 37 0.756 4 0.080 0.080 0.888 81.818 40.909 - LGA N 38 N 38 1.047 4 0.033 0.033 1.301 69.545 34.773 - LGA D 39 D 39 1.156 4 0.018 0.018 1.164 65.455 32.727 - LGA K 40 K 40 1.026 5 0.037 0.037 1.127 65.455 29.091 - LGA V 41 V 41 1.056 3 0.129 0.129 1.295 69.545 39.740 - LGA T 42 T 42 1.517 3 0.052 0.052 1.517 61.818 35.325 - LGA W 43 W 43 1.058 10 0.039 0.039 1.250 73.636 21.039 - LGA K 44 K 44 0.908 5 0.036 0.036 0.927 81.818 36.364 - LGA D 45 D 45 1.062 4 0.132 0.132 1.131 69.545 34.773 - LGA D 46 D 46 0.822 4 0.049 0.049 0.822 81.818 40.909 - LGA E 47 E 47 0.486 5 0.011 0.011 0.486 100.000 44.444 - LGA I 48 I 48 0.637 4 0.090 0.090 0.754 86.364 43.182 - LGA L 49 L 49 0.907 4 0.042 0.042 1.153 77.727 38.864 - LGA K 50 K 50 0.531 5 0.025 0.025 0.638 81.818 36.364 - LGA A 51 A 51 0.795 1 0.048 0.048 1.288 73.636 58.909 - LGA V 52 V 52 1.534 3 0.047 0.047 1.559 58.182 33.247 - LGA H 53 H 53 1.042 6 0.078 0.078 1.230 73.636 29.455 - LGA V 54 V 54 1.015 3 0.034 0.034 1.094 69.545 39.740 - LGA L 55 L 55 0.850 4 0.053 0.053 1.027 77.727 38.864 - LGA E 56 E 56 1.207 5 0.022 0.022 1.207 69.545 30.909 - LGA L 57 L 57 0.606 4 0.047 0.047 1.403 73.636 36.818 - LGA N 58 N 58 2.055 4 0.105 0.105 2.322 45.000 22.500 - LGA P 59 P 59 3.203 3 0.044 0.044 3.707 16.818 9.610 - LGA Q 60 Q 60 4.137 5 0.080 0.080 4.137 11.364 5.051 - LGA D 61 D 61 2.364 4 0.027 0.027 2.885 49.091 24.545 - LGA I 62 I 62 1.651 4 0.057 0.057 1.651 58.182 29.091 - LGA P 63 P 63 2.272 3 0.052 0.052 2.272 51.818 29.610 - LGA K 64 K 64 2.855 5 0.178 0.178 3.930 29.091 12.929 - LGA Y 65 Y 65 3.509 8 0.048 0.048 5.373 13.636 4.545 - LGA F 66 F 66 4.474 7 0.176 0.176 6.067 4.545 1.653 - LGA F 67 F 67 4.258 7 0.242 0.242 4.258 6.818 2.479 - LGA N 68 N 68 5.367 4 0.580 0.580 8.461 0.455 0.227 - LGA A 69 A 69 9.510 1 0.612 0.612 9.510 0.000 0.000 - LGA K 70 K 70 7.744 5 0.527 0.527 9.686 0.000 0.000 - # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 69 276 276 100.00 556 276 49.64 69 0 SUMMARY(RMSD_GDC): 2.222 2.249 2.249 64.157 34.535 0.000 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 69 69 4.0 66 1.72 86.232 90.453 3.618 LGA_LOCAL RMSD: 1.724 Number of atoms: 66 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 2.266 Number of assigned atoms: 69 Std_ASGN_ATOMS RMSD: 2.222 Standard rmsd on all 69 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.931046 * X + 0.353999 * Y + -0.088534 * Z + -2.616779 Y_new = 0.293298 * X + -0.581640 * Y + 0.758730 * Z + 32.060375 Z_new = 0.217095 * X + -0.732379 * Y + -0.645361 * Z + -1.267194 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.305179 -0.218837 -2.293118 [DEG: 17.4855 -12.5385 -131.3860 ] ZXZ: -3.025431 2.272292 2.853420 [DEG: -173.3444 130.1927 163.4889 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: R0974s1TS433_2 REMARK 2: R0974s1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap R0974s1TS433_2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 69 69 4.0 66 1.72 90.453 2.22 REMARK ---------------------------------------------------------- MOLECULE R0974s1TS433_2 PFRMAT TS TARGET R0974s1 MODEL 2 PARENT N/A ATOM 20 N SER 2 -2.617 32.060 -1.267 1.00 0.00 ATOM 21 CA SER 2 -3.939 32.118 -0.654 1.00 0.00 ATOM 22 C SER 2 -3.818 31.676 0.791 1.00 0.00 ATOM 23 O SER 2 -3.005 30.805 1.102 1.00 0.00 ATOM 31 N TYR 3 -4.630 32.252 1.660 1.00 0.00 ATOM 32 CA TYR 3 -4.627 31.901 3.073 1.00 0.00 ATOM 33 C TYR 3 -5.500 30.701 3.371 1.00 0.00 ATOM 34 O TYR 3 -6.491 30.470 2.683 1.00 0.00 ATOM 52 N ASP 4 -5.102 29.937 4.386 1.00 0.00 ATOM 53 CA ASP 4 -5.865 28.815 4.922 1.00 0.00 ATOM 54 C ASP 4 -5.600 28.721 6.410 1.00 0.00 ATOM 55 O ASP 4 -4.603 28.138 6.829 1.00 0.00 ATOM 64 N TYR 5 -6.534 29.214 7.197 1.00 0.00 ATOM 65 CA TYR 5 -6.378 29.312 8.642 1.00 0.00 ATOM 66 C TYR 5 -7.040 28.162 9.403 1.00 0.00 ATOM 67 O TYR 5 -7.205 28.213 10.638 1.00 0.00 ATOM 85 N SER 6 -7.393 27.113 8.670 1.00 0.00 ATOM 86 CA SER 6 -8.080 25.966 9.227 1.00 0.00 ATOM 87 C SER 6 -7.287 25.228 10.303 1.00 0.00 ATOM 88 O SER 6 -7.895 24.588 11.158 1.00 0.00 ATOM 96 N SER 7 -5.945 25.311 10.306 1.00 0.00 ATOM 97 CA SER 7 -5.167 24.626 11.332 1.00 0.00 ATOM 98 C SER 7 -5.299 25.314 12.670 1.00 0.00 ATOM 99 O SER 7 -5.048 24.705 13.725 1.00 0.00 ATOM 107 N LEU 8 -5.710 26.585 12.672 1.00 0.00 ATOM 108 CA LEU 8 -5.816 27.240 13.938 1.00 0.00 ATOM 109 C LEU 8 -7.119 26.726 14.524 1.00 0.00 ATOM 110 O LEU 8 -7.179 26.375 15.700 1.00 0.00 ATOM 126 N LEU 9 -8.141 26.587 13.657 1.00 0.00 ATOM 127 CA LEU 9 -9.452 26.085 14.084 1.00 0.00 ATOM 128 C LEU 9 -9.359 24.654 14.570 1.00 0.00 ATOM 129 O LEU 9 -10.060 24.247 15.504 1.00 0.00 ATOM 145 N GLY 10 -8.518 23.879 13.913 1.00 0.00 ATOM 146 CA GLY 10 -8.336 22.487 14.263 1.00 0.00 ATOM 147 C GLY 10 -7.897 22.352 15.723 1.00 0.00 ATOM 148 O GLY 10 -8.521 21.637 16.517 1.00 0.00 ATOM 152 N LYS 11 -6.869 23.112 16.105 1.00 0.00 ATOM 153 CA LYS 11 -6.398 23.028 17.486 1.00 0.00 ATOM 154 C LYS 11 -7.423 23.651 18.454 1.00 0.00 ATOM 155 O LYS 11 -7.528 23.214 19.606 1.00 0.00 ATOM 174 N ILE 12 -8.162 24.668 18.006 1.00 0.00 ATOM 175 CA ILE 12 -9.195 25.310 18.825 1.00 0.00 ATOM 176 C ILE 12 -10.252 24.295 19.184 1.00 0.00 ATOM 177 O ILE 12 -10.649 24.187 20.348 1.00 0.00 ATOM 193 N THR 13 -10.680 23.502 18.210 1.00 0.00 ATOM 194 CA THR 13 -11.676 22.491 18.503 1.00 0.00 ATOM 195 C THR 13 -11.171 21.570 19.622 1.00 0.00 ATOM 196 O THR 13 -11.930 21.261 20.543 1.00 0.00 ATOM 207 N GLU 14 -9.898 21.146 19.566 1.00 0.00 ATOM 208 CA GLU 14 -9.361 20.263 20.607 1.00 0.00 ATOM 209 C GLU 14 -9.140 20.914 21.999 1.00 0.00 ATOM 210 O GLU 14 -9.382 20.274 23.027 1.00 0.00 ATOM 222 N LYS 15 -8.675 22.170 22.038 1.00 0.00 ATOM 223 CA LYS 15 -8.338 22.851 23.301 1.00 0.00 ATOM 224 C LYS 15 -9.380 23.786 23.910 1.00 0.00 ATOM 225 O LYS 15 -9.322 24.080 25.107 1.00 0.00 ATOM 244 N CYS 16 -10.281 24.309 23.104 1.00 0.00 ATOM 245 CA CYS 16 -11.265 25.278 23.576 1.00 0.00 ATOM 246 C CYS 16 -12.691 24.751 23.368 1.00 0.00 ATOM 247 O CYS 16 -13.596 24.972 24.186 1.00 0.00 ATOM 255 N GLY 17 -12.890 24.092 22.223 1.00 0.00 ATOM 256 CA GLY 17 -14.160 23.516 21.794 1.00 0.00 ATOM 257 C GLY 17 -14.980 24.470 20.940 1.00 0.00 ATOM 258 O GLY 17 -15.953 24.075 20.292 1.00 0.00 ATOM 262 N THR 18 -14.591 25.730 20.964 1.00 0.00 ATOM 263 CA THR 18 -15.260 26.783 20.236 1.00 0.00 ATOM 264 C THR 18 -14.410 28.024 20.107 1.00 0.00 ATOM 265 O THR 18 -13.634 28.370 21.019 1.00 0.00 ATOM 276 N GLN 19 -14.662 28.757 19.021 1.00 0.00 ATOM 277 CA GLN 19 -14.004 30.018 18.739 1.00 0.00 ATOM 278 C GLN 19 -14.263 30.985 19.859 1.00 0.00 ATOM 279 O GLN 19 -13.404 31.788 20.199 1.00 0.00 ATOM 293 N TYR 20 -15.409 30.838 20.502 1.00 0.00 ATOM 294 CA TYR 20 -15.791 31.677 21.612 1.00 0.00 ATOM 295 C TYR 20 -14.787 31.679 22.761 1.00 0.00 ATOM 296 O TYR 20 -14.514 32.743 23.321 1.00 0.00 ATOM 314 N ASN 21 -14.318 30.499 23.166 1.00 0.00 ATOM 315 CA ASN 21 -13.447 30.383 24.330 1.00 0.00 ATOM 316 C ASN 21 -12.051 30.815 23.964 1.00 0.00 ATOM 317 O ASN 21 -11.336 31.465 24.738 1.00 0.00 ATOM 328 N PHE 22 -11.695 30.516 22.731 1.00 0.00 ATOM 329 CA PHE 22 -10.412 30.902 22.201 1.00 0.00 ATOM 330 C PHE 22 -10.356 32.419 22.205 1.00 0.00 ATOM 331 O PHE 22 -9.457 33.034 22.785 1.00 0.00 ATOM 348 N ALA 23 -11.412 33.029 21.679 1.00 0.00 ATOM 349 CA ALA 23 -11.494 34.461 21.594 1.00 0.00 ATOM 350 C ALA 23 -11.365 35.092 22.967 1.00 0.00 ATOM 351 O ALA 23 -10.515 35.965 23.162 1.00 0.00 ATOM 358 N ILE 24 -12.011 34.515 23.986 1.00 0.00 ATOM 359 CA ILE 24 -11.891 35.093 25.315 1.00 0.00 ATOM 360 C ILE 24 -10.457 35.072 25.779 1.00 0.00 ATOM 361 O ILE 24 -9.947 36.076 26.275 1.00 0.00 ATOM 377 N ALA 25 -9.782 33.946 25.589 1.00 0.00 ATOM 378 CA ALA 25 -8.405 33.815 26.028 1.00 0.00 ATOM 379 C ALA 25 -7.495 34.868 25.377 1.00 0.00 ATOM 380 O ALA 25 -6.535 35.335 25.995 1.00 0.00 ATOM 387 N MET 26 -7.794 35.239 24.130 1.00 0.00 ATOM 388 CA MET 26 -7.013 36.225 23.393 1.00 0.00 ATOM 389 C MET 26 -7.471 37.672 23.576 1.00 0.00 ATOM 390 O MET 26 -6.886 38.585 22.983 1.00 0.00 ATOM 404 N GLY 27 -8.570 37.894 24.289 1.00 0.00 ATOM 405 CA GLY 27 -9.104 39.242 24.411 1.00 0.00 ATOM 406 C GLY 27 -9.853 39.714 23.150 1.00 0.00 ATOM 407 O GLY 27 -9.952 40.919 22.897 1.00 0.00 ATOM 411 N LEU 28 -10.336 38.774 22.331 1.00 0.00 ATOM 412 CA LEU 28 -11.035 39.086 21.087 1.00 0.00 ATOM 413 C LEU 28 -12.502 38.692 21.174 1.00 0.00 ATOM 414 O LEU 28 -12.869 37.792 21.920 1.00 0.00 ATOM 430 N SER 29 -13.361 39.314 20.377 1.00 0.00 ATOM 431 CA SER 29 -14.738 38.813 20.317 1.00 0.00 ATOM 432 C SER 29 -14.767 37.549 19.448 1.00 0.00 ATOM 433 O SER 29 -13.862 37.363 18.624 1.00 0.00 ATOM 441 N GLU 30 -15.822 36.724 19.563 1.00 0.00 ATOM 442 CA GLU 30 -15.899 35.480 18.786 1.00 0.00 ATOM 443 C GLU 30 -16.004 35.713 17.284 1.00 0.00 ATOM 444 O GLU 30 -15.586 34.864 16.492 1.00 0.00 ATOM 456 N ARG 31 -16.507 36.886 16.901 1.00 0.00 ATOM 457 CA ARG 31 -16.639 37.273 15.511 1.00 0.00 ATOM 458 C ARG 31 -15.274 37.570 14.933 1.00 0.00 ATOM 459 O ARG 31 -15.038 37.354 13.740 1.00 0.00 ATOM 480 N THR 32 -14.401 38.128 15.771 1.00 0.00 ATOM 481 CA THR 32 -13.085 38.556 15.364 1.00 0.00 ATOM 482 C THR 32 -12.327 37.329 14.952 1.00 0.00 ATOM 483 O THR 32 -11.661 37.315 13.914 1.00 0.00 ATOM 494 N VAL 33 -12.463 36.276 15.758 1.00 0.00 ATOM 495 CA VAL 33 -11.775 35.048 15.443 1.00 0.00 ATOM 496 C VAL 33 -12.338 34.410 14.206 1.00 0.00 ATOM 497 O VAL 33 -11.584 34.093 13.289 1.00 0.00 ATOM 510 N SER 34 -13.654 34.335 14.096 1.00 0.00 ATOM 511 CA SER 34 -14.212 33.657 12.951 1.00 0.00 ATOM 512 C SER 34 -13.728 34.281 11.655 1.00 0.00 ATOM 513 O SER 34 -13.243 33.576 10.770 1.00 0.00 ATOM 521 N LEU 35 -13.734 35.602 11.551 1.00 0.00 ATOM 522 CA LEU 35 -13.297 36.199 10.302 1.00 0.00 ATOM 523 C LEU 35 -11.811 35.916 10.035 1.00 0.00 ATOM 524 O LEU 35 -11.414 35.661 8.880 1.00 0.00 ATOM 540 N LYS 36 -10.992 35.916 11.100 1.00 0.00 ATOM 541 CA LYS 36 -9.560 35.659 10.985 1.00 0.00 ATOM 542 C LYS 36 -9.250 34.196 10.662 1.00 0.00 ATOM 543 O LYS 36 -8.217 33.912 10.065 1.00 0.00 ATOM 562 N LEU 37 -10.116 33.249 11.054 1.00 0.00 ATOM 563 CA LEU 37 -9.851 31.857 10.692 1.00 0.00 ATOM 564 C LEU 37 -10.738 31.302 9.561 1.00 0.00 ATOM 565 O LEU 37 -10.505 30.188 9.096 1.00 0.00 ATOM 581 N ASN 38 -11.681 32.108 9.044 1.00 0.00 ATOM 582 CA ASN 38 -12.538 31.721 7.916 1.00 0.00 ATOM 583 C ASN 38 -12.085 32.380 6.618 1.00 0.00 ATOM 584 O ASN 38 -12.852 32.449 5.648 1.00 0.00 ATOM 595 N ASP 39 -10.831 32.824 6.618 1.00 0.00 ATOM 596 CA ASP 39 -10.134 33.472 5.517 1.00 0.00 ATOM 597 C ASP 39 -10.787 34.749 4.992 1.00 0.00 ATOM 598 O ASP 39 -10.762 35.006 3.785 1.00 0.00 ATOM 607 N LYS 40 -11.307 35.592 5.882 1.00 0.00 ATOM 608 CA LYS 40 -11.881 36.858 5.435 1.00 0.00 ATOM 609 C LYS 40 -10.930 38.010 5.774 1.00 0.00 ATOM 610 O LYS 40 -10.853 39.014 5.068 1.00 0.00 ATOM 629 N VAL 41 -10.263 37.874 6.908 1.00 0.00 ATOM 630 CA VAL 41 -9.291 38.859 7.402 1.00 0.00 ATOM 631 C VAL 41 -8.047 38.107 7.887 1.00 0.00 ATOM 632 O VAL 41 -8.092 36.898 8.072 1.00 0.00 ATOM 645 N THR 42 -6.936 38.798 8.105 1.00 0.00 ATOM 646 CA THR 42 -5.742 38.118 8.609 1.00 0.00 ATOM 647 C THR 42 -5.447 38.375 10.093 1.00 0.00 ATOM 648 O THR 42 -6.003 39.285 10.721 1.00 0.00 ATOM 659 N TRP 43 -4.535 37.575 10.648 1.00 0.00 ATOM 660 CA TRP 43 -4.062 37.730 12.029 1.00 0.00 ATOM 661 C TRP 43 -2.940 38.760 12.101 1.00 0.00 ATOM 662 O TRP 43 -2.088 38.806 11.215 1.00 0.00 ATOM 683 N LYS 44 -2.916 39.568 13.156 1.00 0.00 ATOM 684 CA LYS 44 -1.827 40.525 13.338 1.00 0.00 ATOM 685 C LYS 44 -0.612 39.822 13.915 1.00 0.00 ATOM 686 O LYS 44 -0.726 38.820 14.628 1.00 0.00 ATOM 705 N ASP 45 0.555 40.442 13.784 1.00 0.00 ATOM 706 CA ASP 45 1.765 39.845 14.340 1.00 0.00 ATOM 707 C ASP 45 1.640 39.535 15.835 1.00 0.00 ATOM 708 O ASP 45 2.228 38.573 16.316 1.00 0.00 ATOM 717 N ASP 46 0.916 40.357 16.596 1.00 0.00 ATOM 718 CA ASP 46 0.800 40.080 18.023 1.00 0.00 ATOM 719 C ASP 46 -0.359 39.122 18.317 1.00 0.00 ATOM 720 O ASP 46 -0.276 38.266 19.206 1.00 0.00 ATOM 729 N GLU 47 -1.429 39.214 17.523 1.00 0.00 ATOM 730 CA GLU 47 -2.590 38.368 17.729 1.00 0.00 ATOM 731 C GLU 47 -2.270 36.913 17.451 1.00 0.00 ATOM 732 O GLU 47 -2.702 36.041 18.192 1.00 0.00 ATOM 744 N ILE 48 -1.477 36.632 16.421 1.00 0.00 ATOM 745 CA ILE 48 -1.201 35.235 16.146 1.00 0.00 ATOM 746 C ILE 48 -0.380 34.627 17.279 1.00 0.00 ATOM 747 O ILE 48 -0.509 33.437 17.577 1.00 0.00 ATOM 763 N LEU 49 0.463 35.429 17.916 1.00 0.00 ATOM 764 CA LEU 49 1.252 34.918 19.018 1.00 0.00 ATOM 765 C LEU 49 0.333 34.602 20.190 1.00 0.00 ATOM 766 O LEU 49 0.460 33.557 20.835 1.00 0.00 ATOM 782 N LYS 50 -0.668 35.441 20.423 1.00 0.00 ATOM 783 CA LYS 50 -1.583 35.115 21.500 1.00 0.00 ATOM 784 C LYS 50 -2.301 33.808 21.176 1.00 0.00 ATOM 785 O LYS 50 -2.578 33.000 22.065 1.00 0.00 ATOM 804 N ALA 51 -2.606 33.607 19.892 1.00 0.00 ATOM 805 CA ALA 51 -3.353 32.438 19.461 1.00 0.00 ATOM 806 C ALA 51 -2.618 31.158 19.753 1.00 0.00 ATOM 807 O ALA 51 -3.202 30.205 20.286 1.00 0.00 ATOM 814 N VAL 52 -1.314 31.164 19.536 1.00 0.00 ATOM 815 CA VAL 52 -0.567 29.953 19.789 1.00 0.00 ATOM 816 C VAL 52 -0.387 29.697 21.274 1.00 0.00 ATOM 817 O VAL 52 -0.309 28.541 21.702 1.00 0.00 ATOM 830 N HIS 53 -0.391 30.764 22.073 1.00 0.00 ATOM 831 CA HIS 53 -0.247 30.639 23.517 1.00 0.00 ATOM 832 C HIS 53 -1.490 29.958 24.097 1.00 0.00 ATOM 833 O HIS 53 -1.397 29.166 25.035 1.00 0.00 ATOM 847 N VAL 54 -2.639 30.241 23.487 1.00 0.00 ATOM 848 CA VAL 54 -3.929 29.662 23.864 1.00 0.00 ATOM 849 C VAL 54 -4.012 28.192 23.451 1.00 0.00 ATOM 850 O VAL 54 -4.528 27.353 24.188 1.00 0.00 ATOM 863 N LEU 55 -3.532 27.909 22.245 1.00 0.00 ATOM 864 CA LEU 55 -3.588 26.595 21.620 1.00 0.00 ATOM 865 C LEU 55 -2.386 25.665 21.761 1.00 0.00 ATOM 866 O LEU 55 -2.381 24.594 21.156 1.00 0.00 ATOM 882 N GLU 56 -1.379 26.056 22.534 1.00 0.00 ATOM 883 CA GLU 56 -0.156 25.255 22.729 1.00 0.00 ATOM 884 C GLU 56 0.587 24.963 21.414 1.00 0.00 ATOM 885 O GLU 56 1.115 23.867 21.207 1.00 0.00 ATOM 897 N LEU 57 0.631 25.958 20.541 1.00 0.00 ATOM 898 CA LEU 57 1.304 25.857 19.249 1.00 0.00 ATOM 899 C LEU 57 2.635 26.611 19.184 1.00 0.00 ATOM 900 O LEU 57 2.883 27.546 19.940 1.00 0.00 ATOM 916 N ASN 58 3.506 26.198 18.275 1.00 0.00 ATOM 917 CA ASN 58 4.783 26.876 18.084 1.00 0.00 ATOM 918 C ASN 58 4.632 28.179 17.265 1.00 0.00 ATOM 919 O ASN 58 4.361 28.113 16.068 1.00 0.00 ATOM 930 N PRO 59 4.908 29.371 17.830 1.00 0.00 ATOM 931 CA PRO 59 4.718 30.680 17.205 1.00 0.00 ATOM 932 C PRO 59 5.491 30.897 15.919 1.00 0.00 ATOM 933 O PRO 59 5.160 31.804 15.158 1.00 0.00 ATOM 944 N GLN 60 6.558 30.129 15.710 1.00 0.00 ATOM 945 CA GLN 60 7.387 30.294 14.527 1.00 0.00 ATOM 946 C GLN 60 7.037 29.322 13.410 1.00 0.00 ATOM 947 O GLN 60 7.601 29.400 12.316 1.00 0.00 ATOM 961 N ASP 61 6.131 28.382 13.688 1.00 0.00 ATOM 962 CA ASP 61 5.736 27.387 12.705 1.00 0.00 ATOM 963 C ASP 61 4.347 27.582 12.144 1.00 0.00 ATOM 964 O ASP 61 3.946 26.867 11.223 1.00 0.00 ATOM 973 N ILE 62 3.603 28.554 12.633 1.00 0.00 ATOM 974 CA ILE 62 2.234 28.558 12.192 1.00 0.00 ATOM 975 C ILE 62 2.153 28.947 10.713 1.00 0.00 ATOM 976 O ILE 62 1.431 28.285 9.971 1.00 0.00 ATOM 992 N PRO 63 2.861 29.997 10.219 1.00 0.00 ATOM 993 CA PRO 63 2.846 30.377 8.820 1.00 0.00 ATOM 994 C PRO 63 3.207 29.193 7.921 1.00 0.00 ATOM 995 O PRO 63 2.751 29.127 6.780 1.00 0.00 ATOM 1006 N LYS 64 4.013 28.251 8.442 1.00 0.00 ATOM 1007 CA LYS 64 4.384 27.085 7.676 1.00 0.00 ATOM 1008 C LYS 64 3.146 26.219 7.520 1.00 0.00 ATOM 1009 O LYS 64 2.843 25.716 6.438 1.00 0.00 ATOM 1028 N TYR 65 2.341 26.113 8.581 1.00 0.00 ATOM 1029 CA TYR 65 1.166 25.253 8.521 1.00 0.00 ATOM 1030 C TYR 65 0.261 25.752 7.413 1.00 0.00 ATOM 1031 O TYR 65 -0.358 24.957 6.689 1.00 0.00 ATOM 1049 N PHE 66 0.215 27.082 7.297 1.00 0.00 ATOM 1050 CA PHE 66 -0.624 27.800 6.344 1.00 0.00 ATOM 1051 C PHE 66 -0.114 27.760 4.888 1.00 0.00 ATOM 1052 O PHE 66 -0.887 27.516 3.959 1.00 0.00 ATOM 1069 N PHE 67 1.187 28.011 4.679 1.00 0.00 ATOM 1070 CA PHE 67 1.760 28.090 3.329 1.00 0.00 ATOM 1071 C PHE 67 2.760 27.040 2.854 1.00 0.00 ATOM 1072 O PHE 67 3.020 26.953 1.651 1.00 0.00 ATOM 1089 N ASN 68 3.432 26.333 3.754 1.00 0.00 ATOM 1090 CA ASN 68 4.496 25.451 3.303 1.00 0.00 ATOM 1091 C ASN 68 4.196 23.991 3.580 1.00 0.00 ATOM 1092 O ASN 68 4.287 23.149 2.688 1.00 0.00 ATOM 1103 N ALA 69 3.809 23.711 4.824 1.00 0.00 ATOM 1104 CA ALA 69 3.475 22.372 5.279 1.00 0.00 ATOM 1105 C ALA 69 2.189 21.932 4.619 1.00 0.00 ATOM 1106 O ALA 69 2.014 20.764 4.277 1.00 0.00 ATOM 1113 N LYS 70 1.300 22.912 4.436 1.00 0.00 ATOM 1114 CA LYS 70 -0.014 22.732 3.849 1.00 0.00 ATOM 1115 C LYS 70 -0.823 21.693 4.614 1.00 0.00 ATOM 1116 O LYS 70 -1.382 20.761 4.030 1.00 0.00 TER END