####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 316), selected 41 , name T0643TS301_1-D1 # Molecule2: number of CA atoms 73 ( 591), selected 41 , name T0643-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0643TS301_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 41 19 - 59 3.20 3.20 LCS_AVERAGE: 56.16 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 31 26 - 56 1.98 3.61 LCS_AVERAGE: 41.00 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 22 34 - 55 0.98 4.16 LCS_AVERAGE: 24.22 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT H 19 H 19 15 24 41 12 13 14 20 25 29 32 34 35 36 40 41 41 41 41 41 41 41 41 41 LCS_GDT T 20 T 20 15 24 41 12 13 14 20 25 29 32 34 35 36 40 41 41 41 41 41 41 41 41 41 LCS_GDT T 21 T 21 15 24 41 12 13 14 19 25 29 32 34 35 36 40 41 41 41 41 41 41 41 41 41 LCS_GDT V 22 V 22 15 24 41 12 13 14 20 25 29 32 34 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT R 23 R 23 15 27 41 12 13 15 22 25 29 32 34 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT N 24 N 24 15 27 41 12 13 14 20 25 29 32 34 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT A 25 A 25 15 30 41 12 13 14 20 25 29 32 34 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT L 26 L 26 15 31 41 12 13 20 24 26 29 32 34 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT K 27 K 27 15 31 41 12 13 20 24 26 29 32 34 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT D 28 D 28 15 31 41 12 13 20 24 26 29 32 34 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT L 29 L 29 15 31 41 12 13 14 24 26 29 32 34 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT L 30 L 30 15 31 41 12 18 22 24 26 29 32 34 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT K 31 K 31 15 31 41 10 15 22 24 26 29 32 34 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT D 32 D 32 15 31 41 3 5 10 17 25 29 32 34 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT M 33 M 33 15 31 41 3 7 11 15 21 27 32 34 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT N 34 N 34 22 31 41 11 15 22 24 26 29 32 34 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT Q 35 Q 35 22 31 41 11 18 22 24 26 29 32 34 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT S 36 S 36 22 31 41 11 15 22 24 26 29 32 34 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT S 37 S 37 22 31 41 11 18 22 24 26 29 32 34 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT L 38 L 38 22 31 41 11 18 22 24 26 29 32 34 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT A 39 A 39 22 31 41 11 18 22 24 26 29 32 34 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT K 40 K 40 22 31 41 11 18 22 24 26 29 32 34 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT E 41 E 41 22 31 41 11 18 22 24 26 29 32 34 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT C 42 C 42 22 31 41 11 18 22 24 26 29 32 34 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT P 43 P 43 22 31 41 5 14 21 24 26 29 31 33 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT L 44 L 44 22 31 41 11 18 22 24 26 29 32 34 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT S 45 S 45 22 31 41 11 18 22 24 26 29 32 34 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT Q 46 Q 46 22 31 41 11 18 22 24 26 29 32 34 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT S 47 S 47 22 31 41 11 18 22 24 26 29 32 34 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT M 48 M 48 22 31 41 11 18 22 24 26 29 32 34 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT I 49 I 49 22 31 41 11 18 22 24 26 29 32 34 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT S 50 S 50 22 31 41 11 18 22 24 26 29 32 34 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT S 51 S 51 22 31 41 11 18 22 24 26 29 32 34 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT I 52 I 52 22 31 41 11 18 22 24 26 29 32 34 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT V 53 V 53 22 31 41 11 18 22 24 26 29 31 34 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT N 54 N 54 22 31 41 11 16 22 24 26 29 31 32 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT S 55 S 55 22 31 41 4 6 17 24 25 28 31 32 34 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT T 56 T 56 4 31 41 4 4 4 6 7 14 31 32 34 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT Y 57 Y 57 4 29 41 4 4 4 6 8 17 21 32 34 34 37 41 41 41 41 41 41 41 41 41 LCS_GDT Y 58 Y 58 4 29 41 4 5 15 23 24 29 31 32 34 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT A 59 A 59 4 28 41 3 4 4 6 22 29 31 32 34 37 40 41 41 41 41 41 41 41 41 41 LCS_AVERAGE LCS_A: 40.46 ( 24.22 41.00 56.16 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 12 18 22 24 26 29 32 34 35 37 40 41 41 41 41 41 41 41 41 41 GDT PERCENT_AT 16.44 24.66 30.14 32.88 35.62 39.73 43.84 46.58 47.95 50.68 54.79 56.16 56.16 56.16 56.16 56.16 56.16 56.16 56.16 56.16 GDT RMS_LOCAL 0.28 0.67 0.88 1.03 1.33 1.83 2.06 2.25 2.36 2.67 3.07 3.20 3.20 3.20 3.20 3.20 3.20 3.20 3.20 3.20 GDT RMS_ALL_AT 6.03 3.97 3.84 4.06 3.59 3.89 3.73 3.67 3.58 3.31 3.21 3.20 3.20 3.20 3.20 3.20 3.20 3.20 3.20 3.20 # Checking swapping # possible swapping detected: Y 57 Y 57 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA H 19 H 19 2.484 0 0.082 1.111 4.116 64.881 61.619 LGA T 20 T 20 2.972 0 0.034 0.042 3.938 57.143 51.224 LGA T 21 T 21 3.363 0 0.029 0.271 4.639 53.571 47.483 LGA V 22 V 22 2.215 0 0.048 0.053 2.868 69.048 66.122 LGA R 23 R 23 0.882 0 0.090 1.514 4.349 85.952 71.775 LGA N 24 N 24 2.304 0 0.031 0.103 3.835 68.810 58.571 LGA A 25 A 25 2.277 0 0.060 0.069 3.151 73.095 68.476 LGA L 26 L 26 1.237 0 0.034 0.892 3.914 83.690 70.952 LGA K 27 K 27 1.155 0 0.044 0.624 5.406 85.952 63.862 LGA D 28 D 28 0.662 0 0.060 0.903 5.214 95.238 71.131 LGA L 29 L 29 1.834 0 0.031 0.109 3.690 72.976 63.393 LGA L 30 L 30 2.515 0 0.238 1.368 5.038 61.190 60.417 LGA K 31 K 31 1.361 0 0.054 0.723 9.600 81.429 52.857 LGA D 32 D 32 3.076 0 0.201 0.222 4.319 52.500 45.595 LGA M 33 M 33 4.156 0 0.690 0.887 5.651 35.000 43.988 LGA N 34 N 34 1.173 0 0.061 0.889 4.734 85.952 68.750 LGA Q 35 Q 35 0.731 0 0.039 0.553 2.233 90.476 87.619 LGA S 36 S 36 1.567 0 0.038 0.588 2.476 75.000 71.587 LGA S 37 S 37 1.997 0 0.028 0.649 2.212 72.857 71.508 LGA L 38 L 38 1.474 0 0.044 0.066 1.852 77.143 78.214 LGA A 39 A 39 1.294 0 0.057 0.062 1.496 81.429 81.429 LGA K 40 K 40 2.036 0 0.240 1.140 6.103 66.786 55.661 LGA E 41 E 41 2.493 0 0.009 0.826 3.696 60.952 58.995 LGA C 42 C 42 2.712 0 0.647 0.991 2.987 59.048 58.413 LGA P 43 P 43 5.329 0 0.069 0.086 6.210 28.810 25.102 LGA L 44 L 44 3.290 0 0.038 0.086 5.004 55.714 45.952 LGA S 45 S 45 1.913 0 0.076 0.092 2.433 77.381 77.302 LGA Q 46 Q 46 0.929 0 0.037 0.782 5.754 88.214 62.116 LGA S 47 S 47 0.650 0 0.044 0.057 0.950 92.857 92.063 LGA M 48 M 48 1.166 0 0.009 0.214 3.530 81.548 70.536 LGA I 49 I 49 1.488 0 0.043 0.054 2.209 75.119 77.202 LGA S 50 S 50 2.008 0 0.012 0.687 2.914 64.881 64.921 LGA S 51 S 51 2.366 0 0.022 0.660 3.502 57.500 61.270 LGA I 52 I 52 3.464 0 0.014 0.021 4.441 46.905 47.619 LGA V 53 V 53 4.066 0 0.109 0.127 4.724 37.262 38.980 LGA N 54 N 54 5.075 0 0.157 0.470 6.304 24.048 27.143 LGA S 55 S 55 6.884 0 0.542 0.515 7.699 14.286 13.571 LGA T 56 T 56 7.911 0 0.133 1.146 10.081 5.119 4.762 LGA Y 57 Y 57 9.132 0 0.085 1.315 19.642 4.048 1.389 LGA Y 58 Y 58 8.240 0 0.186 1.322 12.136 2.976 2.619 LGA A 59 A 59 8.157 0 0.036 0.049 8.460 5.357 5.714 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 41 164 164 100.00 316 316 100.00 73 SUMMARY(RMSD_GDC): 3.202 3.143 3.982 33.865 30.793 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 73 4.0 34 2.25 40.068 42.050 1.449 LGA_LOCAL RMSD: 2.246 Number of atoms: 34 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 3.674 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 3.202 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.407576 * X + 0.633564 * Y + -0.657631 * Z + 3.657652 Y_new = -0.904257 * X + 0.380401 * Y + -0.193946 * Z + 13.293504 Z_new = 0.127286 * X + 0.673715 * Y + 0.727947 * Z + 26.025011 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.147335 -0.127632 0.746726 [DEG: -65.7375 -7.3128 42.7842 ] ZXZ: -1.284010 0.755473 0.186730 [DEG: -73.5683 43.2854 10.6989 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0643TS301_1-D1 REMARK 2: T0643-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0643TS301_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 73 4.0 34 2.25 42.050 3.20 REMARK ---------------------------------------------------------- MOLECULE T0643TS301_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0643 REMARK MODEL 1 REMARK PARENT N/A ATOM 2 N HIS 19 7.524 14.106 19.022 1.00 0.00 N ATOM 3 CA HIS 19 6.180 14.433 19.472 1.00 0.00 C ATOM 4 CB HIS 19 5.412 15.174 18.377 1.00 0.00 C ATOM 5 CG HIS 19 5.877 16.581 18.159 1.00 0.00 C ATOM 6 CD2 HIS 19 7.094 17.328 18.444 1.00 0.00 C ATOM 7 ND1 HIS 19 5.092 17.538 17.557 1.00 0.00 N ATOM 8 CE1 HIS 19 5.777 18.695 17.501 1.00 0.00 C ATOM 9 NE2 HIS 19 6.978 18.575 18.034 1.00 0.00 N ATOM 10 O HIS 19 4.756 13.210 20.942 1.00 0.00 O ATOM 11 C HIS 19 5.395 13.204 19.894 1.00 0.00 C ATOM 12 N THR 20 5.434 12.152 19.078 1.00 0.00 N ATOM 13 CA THR 20 4.688 10.942 19.405 1.00 0.00 C ATOM 14 CB THR 20 4.695 9.943 18.233 1.00 0.00 C ATOM 15 CG2 THR 20 3.929 8.682 18.601 1.00 0.00 C ATOM 16 OG1 THR 20 4.069 10.540 17.089 1.00 0.00 O ATOM 17 O THR 20 4.476 9.752 21.477 1.00 0.00 O ATOM 18 C THR 20 5.240 10.251 20.644 1.00 0.00 C ATOM 19 N THR 21 6.560 10.220 20.773 1.00 0.00 N ATOM 20 CA THR 21 7.172 9.592 21.937 1.00 0.00 C ATOM 21 CB THR 21 8.710 9.614 21.848 1.00 0.00 C ATOM 22 CG2 THR 21 9.326 8.995 23.092 1.00 0.00 C ATOM 23 OG1 THR 21 9.136 8.863 20.703 1.00 0.00 O ATOM 24 O THR 21 6.296 9.638 24.176 1.00 0.00 O ATOM 25 C THR 21 6.722 10.288 23.221 1.00 0.00 C ATOM 26 N VAL 22 6.820 11.611 23.240 1.00 0.00 N ATOM 27 CA VAL 22 6.420 12.376 24.416 1.00 0.00 C ATOM 28 CB VAL 22 6.853 13.850 24.306 1.00 0.00 C ATOM 29 CG1 VAL 22 6.274 14.662 25.454 1.00 0.00 C ATOM 30 CG2 VAL 22 8.369 13.959 24.282 1.00 0.00 C ATOM 31 O VAL 22 4.456 12.161 25.783 1.00 0.00 O ATOM 32 C VAL 22 4.916 12.306 24.650 1.00 0.00 C ATOM 33 N ARG 23 4.151 12.416 23.570 1.00 0.00 N ATOM 34 CA ARG 23 2.697 12.373 23.672 1.00 0.00 C ATOM 35 CB ARG 23 2.060 12.503 22.287 1.00 0.00 C ATOM 36 CG ARG 23 0.541 12.483 22.299 1.00 0.00 C ATOM 37 CD ARG 23 -0.023 12.491 20.887 1.00 0.00 C ATOM 38 NE ARG 23 0.320 11.277 20.153 1.00 0.00 N ATOM 39 CZ ARG 23 0.231 11.149 18.834 1.00 0.00 C ATOM 40 NH1 ARG 23 0.565 10.005 18.255 1.00 0.00 H ATOM 41 NH2 ARG 23 -0.191 12.168 18.097 1.00 0.00 H ATOM 42 O ARG 23 1.475 11.122 25.333 1.00 0.00 O ATOM 43 C ARG 23 2.224 11.088 24.345 1.00 0.00 C ATOM 44 N ASN 24 2.669 9.954 23.812 1.00 0.00 N ATOM 45 CA ASN 24 2.262 8.667 24.359 1.00 0.00 C ATOM 46 CB ASN 24 2.758 7.525 23.469 1.00 0.00 C ATOM 47 CG ASN 24 2.170 7.576 22.073 1.00 0.00 C ATOM 48 ND2 ASN 24 2.921 7.077 21.098 1.00 0.00 N ATOM 49 OD1 ASN 24 1.055 8.059 21.877 1.00 0.00 O ATOM 50 O ASN 24 1.943 7.928 26.617 1.00 0.00 O ATOM 51 C ASN 24 2.725 8.403 25.794 1.00 0.00 C ATOM 52 N ALA 25 3.981 8.703 26.109 1.00 0.00 N ATOM 53 CA ALA 25 4.464 8.447 27.469 1.00 0.00 C ATOM 54 CB ALA 25 5.980 8.533 27.517 1.00 0.00 C ATOM 55 O ALA 25 3.584 9.019 29.620 1.00 0.00 O ATOM 56 C ALA 25 3.865 9.413 28.489 1.00 0.00 C ATOM 57 N LEU 26 3.645 10.665 28.091 1.00 0.00 N ATOM 58 CA LEU 26 3.047 11.633 29.008 1.00 0.00 C ATOM 59 CB LEU 26 2.962 13.012 28.349 1.00 0.00 C ATOM 60 CG LEU 26 2.103 14.054 29.068 1.00 0.00 C ATOM 61 CD1 LEU 26 2.530 14.197 30.521 1.00 0.00 C ATOM 62 CD2 LEU 26 2.183 15.398 28.358 1.00 0.00 C ATOM 63 O LEU 26 1.307 11.191 30.594 1.00 0.00 O ATOM 64 C LEU 26 1.674 11.136 29.424 1.00 0.00 C ATOM 65 N LYS 27 0.918 10.651 28.448 1.00 0.00 N ATOM 66 CA LYS 27 -0.417 10.133 28.714 1.00 0.00 C ATOM 67 CB LYS 27 -1.109 9.742 27.407 1.00 0.00 C ATOM 68 CG LYS 27 -2.592 9.447 27.555 1.00 0.00 C ATOM 69 CD LYS 27 -3.219 9.081 26.218 1.00 0.00 C ATOM 70 CE LYS 27 -4.704 8.794 26.365 1.00 0.00 C ATOM 71 NZ LYS 27 -5.344 8.501 25.053 1.00 0.00 N ATOM 72 O LYS 27 -1.084 8.831 30.615 1.00 0.00 O ATOM 73 C LYS 27 -0.320 8.938 29.661 1.00 0.00 C ATOM 74 N ASP 28 0.632 8.044 29.402 1.00 0.00 N ATOM 75 CA ASP 28 0.804 6.870 30.251 1.00 0.00 C ATOM 76 CB ASP 28 1.913 5.970 29.700 1.00 0.00 C ATOM 77 CG ASP 28 1.504 5.253 28.430 1.00 0.00 C ATOM 78 OD1 ASP 28 0.293 5.235 28.120 1.00 0.00 O ATOM 79 OD2 ASP 28 2.393 4.709 27.742 1.00 0.00 O ATOM 80 O ASP 28 0.479 6.867 32.631 1.00 0.00 O ATOM 81 C ASP 28 1.120 7.311 31.681 1.00 0.00 C ATOM 82 N LEU 29 2.112 8.188 31.825 1.00 0.00 N ATOM 83 CA LEU 29 2.492 8.682 33.146 1.00 0.00 C ATOM 84 CB LEU 29 3.628 9.701 33.030 1.00 0.00 C ATOM 85 CG LEU 29 4.985 9.155 32.581 1.00 0.00 C ATOM 86 CD1 LEU 29 5.975 10.289 32.361 1.00 0.00 C ATOM 87 CD2 LEU 29 5.531 8.165 33.598 1.00 0.00 C ATOM 88 O LEU 29 1.058 9.035 35.041 1.00 0.00 O ATOM 89 C LEU 29 1.296 9.306 33.858 1.00 0.00 C ATOM 90 N LEU 30 0.532 10.126 33.137 1.00 0.00 N ATOM 91 CA LEU 30 -0.635 10.788 33.722 1.00 0.00 C ATOM 92 CB LEU 30 -1.221 11.806 32.741 1.00 0.00 C ATOM 93 CG LEU 30 -2.478 12.546 33.203 1.00 0.00 C ATOM 94 CD1 LEU 30 -2.193 13.361 34.453 1.00 0.00 C ATOM 95 CD2 LEU 30 -3.010 13.444 32.095 1.00 0.00 C ATOM 96 O LEU 30 -2.191 9.802 35.261 1.00 0.00 O ATOM 97 C LEU 30 -1.713 9.786 34.129 1.00 0.00 C ATOM 98 N LYS 31 -2.087 8.924 33.191 1.00 0.00 N ATOM 99 CA LYS 31 -3.110 7.908 33.423 1.00 0.00 C ATOM 100 CB LYS 31 -3.398 7.133 32.136 1.00 0.00 C ATOM 101 CG LYS 31 -4.082 7.955 31.056 1.00 0.00 C ATOM 102 CD LYS 31 -5.550 8.180 31.381 1.00 0.00 C ATOM 103 CE LYS 31 -6.301 8.740 30.185 1.00 0.00 C ATOM 104 NZ LYS 31 -7.730 9.012 30.501 1.00 0.00 N ATOM 105 O LYS 31 -3.547 6.511 35.323 1.00 0.00 O ATOM 106 C LYS 31 -2.707 6.936 34.527 1.00 0.00 C ATOM 107 N ASP 32 -1.428 6.573 34.570 1.00 0.00 N ATOM 108 CA ASP 32 -0.955 5.649 35.595 1.00 0.00 C ATOM 109 CB ASP 32 0.518 5.301 35.364 1.00 0.00 C ATOM 110 CG ASP 32 0.721 4.397 34.163 1.00 0.00 C ATOM 111 OD1 ASP 32 -0.275 3.821 33.678 1.00 0.00 O ATOM 112 OD2 ASP 32 1.878 4.264 33.710 1.00 0.00 O ATOM 113 O ASP 32 -1.330 5.540 37.958 1.00 0.00 O ATOM 114 C ASP 32 -1.152 6.256 36.975 1.00 0.00 C ATOM 115 N MET 33 -1.125 7.582 37.043 1.00 0.00 N ATOM 116 CA MET 33 -1.314 8.285 38.308 1.00 0.00 C ATOM 117 CB MET 33 -0.536 9.602 38.309 1.00 0.00 C ATOM 118 CG MET 33 0.972 9.432 38.222 1.00 0.00 C ATOM 119 SD MET 33 1.859 10.996 38.348 1.00 0.00 S ATOM 120 CE MET 33 1.395 11.775 36.803 1.00 0.00 C ATOM 121 O MET 33 -3.156 9.024 39.659 1.00 0.00 O ATOM 122 C MET 33 -2.793 8.554 38.579 1.00 0.00 C ATOM 123 N ASN 34 -6.402 13.742 36.009 1.00 0.00 N ATOM 124 CA ASN 34 -7.171 14.328 34.919 1.00 0.00 C ATOM 125 CB ASN 34 -8.481 14.919 35.445 1.00 0.00 C ATOM 126 CG ASN 34 -9.461 15.244 34.335 1.00 0.00 C ATOM 127 ND2 ASN 34 -10.311 14.283 33.997 1.00 0.00 N ATOM 128 OD1 ASN 34 -9.450 16.347 33.788 1.00 0.00 O ATOM 129 O ASN 34 -5.210 15.705 34.873 1.00 0.00 O ATOM 130 C ASN 34 -6.241 15.356 34.285 1.00 0.00 C ATOM 131 N GLN 35 -6.584 15.842 33.096 1.00 0.00 N ATOM 132 CA GLN 35 -5.739 16.840 32.450 1.00 0.00 C ATOM 133 CB GLN 35 -6.219 17.107 31.022 1.00 0.00 C ATOM 134 CG GLN 35 -6.004 15.943 30.068 1.00 0.00 C ATOM 135 CD GLN 35 -6.562 16.212 28.685 1.00 0.00 C ATOM 136 OE1 GLN 35 -7.492 17.005 28.525 1.00 0.00 O ATOM 137 NE2 GLN 35 -5.997 15.554 27.681 1.00 0.00 N ATOM 138 O GLN 35 -4.699 18.761 33.436 1.00 0.00 O ATOM 139 C GLN 35 -5.738 18.123 33.268 1.00 0.00 C ATOM 140 N SER 36 -6.904 18.487 33.798 1.00 0.00 N ATOM 141 CA SER 36 -7.017 19.705 34.591 1.00 0.00 C ATOM 142 CB SER 36 -8.481 19.989 34.932 1.00 0.00 C ATOM 143 OG SER 36 -9.012 18.983 35.777 1.00 0.00 O ATOM 144 O SER 36 -5.559 20.590 36.283 1.00 0.00 O ATOM 145 C SER 36 -6.194 19.616 35.875 1.00 0.00 C ATOM 146 N SER 37 -6.207 18.451 36.515 1.00 0.00 N ATOM 147 CA SER 37 -5.444 18.275 37.744 1.00 0.00 C ATOM 148 CB SER 37 -5.809 16.950 38.416 1.00 0.00 C ATOM 149 OG SER 37 -5.426 15.848 37.612 1.00 0.00 O ATOM 150 O SER 37 -3.157 18.852 38.208 1.00 0.00 O ATOM 151 C SER 37 -3.951 18.336 37.424 1.00 0.00 C ATOM 152 N LEU 38 -3.578 17.803 36.266 1.00 0.00 N ATOM 153 CA LEU 38 -2.182 17.808 35.846 1.00 0.00 C ATOM 154 CB LEU 38 -1.984 16.895 34.636 1.00 0.00 C ATOM 155 CG LEU 38 -0.551 16.756 34.118 1.00 0.00 C ATOM 156 CD1 LEU 38 0.360 16.195 35.200 1.00 0.00 C ATOM 157 CD2 LEU 38 -0.510 15.871 32.880 1.00 0.00 C ATOM 158 O LEU 38 -0.621 19.639 35.766 1.00 0.00 O ATOM 159 C LEU 38 -1.762 19.241 35.532 1.00 0.00 C ATOM 160 N ALA 39 -2.698 20.024 35.013 1.00 0.00 N ATOM 161 CA ALA 39 -2.418 21.418 34.695 1.00 0.00 C ATOM 162 CB ALA 39 -3.604 22.046 33.979 1.00 0.00 C ATOM 163 O ALA 39 -1.119 22.931 36.042 1.00 0.00 O ATOM 164 C ALA 39 -2.089 22.174 35.983 1.00 0.00 C ATOM 165 N LYS 40 -2.890 21.952 37.023 1.00 0.00 N ATOM 166 CA LYS 40 -2.676 22.625 38.306 1.00 0.00 C ATOM 167 CB LYS 40 -3.816 22.308 39.275 1.00 0.00 C ATOM 168 CG LYS 40 -5.140 22.958 38.909 1.00 0.00 C ATOM 169 CD LYS 40 -6.231 22.585 39.901 1.00 0.00 C ATOM 170 CE LYS 40 -7.558 23.224 39.529 1.00 0.00 C ATOM 171 NZ LYS 40 -8.646 22.832 40.468 1.00 0.00 N ATOM 172 O LYS 40 -0.641 23.088 39.505 1.00 0.00 O ATOM 173 C LYS 40 -1.344 22.242 38.943 1.00 0.00 C ATOM 174 N GLU 41 -1.002 20.963 38.849 1.00 0.00 N ATOM 175 CA GLU 41 0.242 20.456 39.419 1.00 0.00 C ATOM 176 CB GLU 41 0.267 18.927 39.374 1.00 0.00 C ATOM 177 CG GLU 41 -0.725 18.262 40.312 1.00 0.00 C ATOM 178 CD GLU 41 -0.714 16.751 40.198 1.00 0.00 C ATOM 179 OE1 GLU 41 -0.075 16.232 39.258 1.00 0.00 O ATOM 180 OE2 GLU 41 -1.343 16.085 41.047 1.00 0.00 O ATOM 181 O GLU 41 2.459 21.361 39.388 1.00 0.00 O ATOM 182 C GLU 41 1.493 20.986 38.727 1.00 0.00 C ATOM 183 N CYS 42 1.461 21.018 37.397 1.00 0.00 N ATOM 184 CA CYS 42 2.608 21.439 36.594 1.00 0.00 C ATOM 185 CB CYS 42 2.639 20.681 35.266 1.00 0.00 C ATOM 186 SG CYS 42 2.893 18.898 35.429 1.00 0.00 S ATOM 187 O CYS 42 3.816 23.398 35.954 1.00 0.00 O ATOM 188 C CYS 42 2.724 22.920 36.250 1.00 0.00 C ATOM 189 N PRO 43 1.609 23.638 36.252 1.00 0.00 N ATOM 190 CA PRO 43 1.662 25.040 35.893 1.00 0.00 C ATOM 191 CB PRO 43 3.006 25.513 36.448 1.00 0.00 C ATOM 192 CG PRO 43 3.859 24.288 36.458 1.00 0.00 C ATOM 193 CD PRO 43 2.938 23.143 36.775 1.00 0.00 C ATOM 194 O PRO 43 1.701 26.311 33.865 1.00 0.00 O ATOM 195 C PRO 43 1.583 25.204 34.387 1.00 0.00 C ATOM 196 N LEU 44 1.410 24.091 33.677 1.00 0.00 N ATOM 197 CA LEU 44 1.284 24.117 32.222 1.00 0.00 C ATOM 198 CB LEU 44 2.034 22.939 31.598 1.00 0.00 C ATOM 199 CG LEU 44 3.538 22.872 31.872 1.00 0.00 C ATOM 200 CD1 LEU 44 4.139 21.613 31.265 1.00 0.00 C ATOM 201 CD2 LEU 44 4.238 24.108 31.326 1.00 0.00 C ATOM 202 O LEU 44 -0.942 23.278 32.514 1.00 0.00 O ATOM 203 C LEU 44 -0.218 24.085 31.931 1.00 0.00 C ATOM 204 N SER 45 -0.692 24.960 31.046 1.00 0.00 N ATOM 205 CA SER 45 -2.122 25.012 30.746 1.00 0.00 C ATOM 206 CB SER 45 -2.404 26.052 29.660 1.00 0.00 C ATOM 207 OG SER 45 -1.944 25.606 28.396 1.00 0.00 O ATOM 208 O SER 45 -1.999 22.872 29.665 1.00 0.00 O ATOM 209 C SER 45 -2.687 23.669 30.306 1.00 0.00 C ATOM 210 N GLN 46 -3.947 23.425 30.659 1.00 0.00 N ATOM 211 CA GLN 46 -4.615 22.189 30.278 1.00 0.00 C ATOM 212 CB GLN 46 -6.019 22.129 30.885 1.00 0.00 C ATOM 213 CG GLN 46 -6.759 20.832 30.609 1.00 0.00 C ATOM 214 CD GLN 46 -8.108 20.773 31.297 1.00 0.00 C ATOM 215 OE1 GLN 46 -8.496 21.703 32.004 1.00 0.00 O ATOM 216 NE2 GLN 46 -8.829 19.677 31.094 1.00 0.00 N ATOM 217 O GLN 46 -4.588 21.037 28.167 1.00 0.00 O ATOM 218 C GLN 46 -4.659 22.117 28.757 1.00 0.00 C ATOM 219 N SER 47 -4.781 23.280 28.131 1.00 0.00 N ATOM 220 CA SER 47 -4.837 23.350 26.678 1.00 0.00 C ATOM 221 CB SER 47 -5.075 24.791 26.220 1.00 0.00 C ATOM 222 OG SER 47 -5.108 24.876 24.806 1.00 0.00 O ATOM 223 O SER 47 -3.582 21.963 25.178 1.00 0.00 O ATOM 224 C SER 47 -3.547 22.802 26.077 1.00 0.00 C ATOM 225 N MET 48 -2.408 23.273 26.574 1.00 0.00 N ATOM 226 CA MET 48 -1.129 22.811 26.057 1.00 0.00 C ATOM 227 CB MET 48 0.019 23.622 26.664 1.00 0.00 C ATOM 228 CG MET 48 1.388 23.281 26.097 1.00 0.00 C ATOM 229 SD MET 48 2.670 24.429 26.635 1.00 0.00 S ATOM 230 CE MET 48 2.019 25.978 26.015 1.00 0.00 C ATOM 231 O MET 48 -0.445 20.592 25.468 1.00 0.00 O ATOM 232 C MET 48 -0.923 21.325 26.333 1.00 0.00 C ATOM 233 N ILE 49 -1.280 20.884 27.537 1.00 0.00 N ATOM 234 CA ILE 49 -1.140 19.474 27.894 1.00 0.00 C ATOM 235 CB ILE 49 -1.576 19.214 29.349 1.00 0.00 C ATOM 236 CG1 ILE 49 -0.595 19.871 30.323 1.00 0.00 C ATOM 237 CG2 ILE 49 -1.714 17.720 29.605 1.00 0.00 C ATOM 238 CD1 ILE 49 -1.091 19.911 31.753 1.00 0.00 C ATOM 239 O ILE 49 -1.504 17.520 26.539 1.00 0.00 O ATOM 240 C ILE 49 -1.949 18.597 26.936 1.00 0.00 C ATOM 241 N SER 50 -3.136 19.067 26.564 1.00 0.00 N ATOM 242 CA SER 50 -3.966 18.312 25.640 1.00 0.00 C ATOM 243 CB SER 50 -5.349 18.955 25.515 1.00 0.00 C ATOM 244 OG SER 50 -6.063 18.872 26.736 1.00 0.00 O ATOM 245 O SER 50 -3.282 17.153 23.656 1.00 0.00 O ATOM 246 C SER 50 -3.303 18.216 24.276 1.00 0.00 C ATOM 247 N SER 51 -2.754 19.335 23.812 1.00 0.00 N ATOM 248 CA SER 51 -2.079 19.383 22.518 1.00 0.00 C ATOM 249 CB SER 51 -1.662 20.817 22.184 1.00 0.00 C ATOM 250 OG SER 51 -2.795 21.646 21.991 1.00 0.00 O ATOM 251 O SER 51 -0.582 17.807 21.499 1.00 0.00 O ATOM 252 C SER 51 -0.859 18.462 22.502 1.00 0.00 C ATOM 253 N ILE 52 -0.127 18.421 23.611 1.00 0.00 N ATOM 254 CA ILE 52 1.055 17.571 23.685 1.00 0.00 C ATOM 255 CB ILE 52 1.848 17.820 24.981 1.00 0.00 C ATOM 256 CG1 ILE 52 2.453 19.226 24.973 1.00 0.00 C ATOM 257 CG2 ILE 52 2.908 16.747 25.170 1.00 0.00 C ATOM 258 CD1 ILE 52 3.116 19.613 26.278 1.00 0.00 C ATOM 259 O ILE 52 1.288 15.338 22.841 1.00 0.00 O ATOM 260 C ILE 52 0.667 16.101 23.585 1.00 0.00 C ATOM 261 N VAL 53 -0.354 15.700 24.333 1.00 0.00 N ATOM 262 CA VAL 53 -0.788 14.310 24.305 1.00 0.00 C ATOM 263 CB VAL 53 -1.826 14.021 25.405 1.00 0.00 C ATOM 264 CG1 VAL 53 -2.399 12.621 25.241 1.00 0.00 C ATOM 265 CG2 VAL 53 -1.204 14.188 26.783 1.00 0.00 C ATOM 266 O VAL 53 -1.391 12.732 22.608 1.00 0.00 O ATOM 267 C VAL 53 -1.370 13.912 22.948 1.00 0.00 C ATOM 268 N ASN 54 -1.837 14.889 22.173 1.00 0.00 N ATOM 269 CA ASN 54 -2.391 14.593 20.849 1.00 0.00 C ATOM 270 CB ASN 54 -3.557 15.531 20.536 1.00 0.00 C ATOM 271 CG ASN 54 -4.777 15.252 21.391 1.00 0.00 C ATOM 272 ND2 ASN 54 -5.589 16.279 21.614 1.00 0.00 N ATOM 273 OD1 ASN 54 -4.986 14.126 21.844 1.00 0.00 O ATOM 274 O ASN 54 -1.607 14.431 18.587 1.00 0.00 O ATOM 275 C ASN 54 -1.327 14.685 19.759 1.00 0.00 C ATOM 276 N SER 55 -0.111 15.051 20.150 1.00 0.00 N ATOM 277 CA SER 55 0.970 15.174 19.189 1.00 0.00 C ATOM 278 CB SER 55 1.029 13.939 18.289 1.00 0.00 C ATOM 279 OG SER 55 2.319 13.779 17.725 1.00 0.00 O ATOM 280 O SER 55 1.352 16.455 17.207 1.00 0.00 O ATOM 281 C SER 55 0.847 16.417 18.328 1.00 0.00 C ATOM 282 N THR 56 0.185 17.440 18.852 1.00 0.00 N ATOM 283 CA THR 56 -0.009 18.682 18.113 1.00 0.00 C ATOM 284 CB THR 56 -1.377 19.318 18.426 1.00 0.00 C ATOM 285 CG2 THR 56 -1.550 20.617 17.654 1.00 0.00 C ATOM 286 OG1 THR 56 -2.424 18.417 18.045 1.00 0.00 O ATOM 287 O THR 56 1.291 20.593 17.494 1.00 0.00 O ATOM 288 C THR 56 1.047 19.747 18.357 1.00 0.00 C ATOM 289 N TYR 57 1.672 19.724 19.528 1.00 0.00 N ATOM 290 CA TYR 57 2.699 20.709 19.830 1.00 0.00 C ATOM 291 CB TYR 57 2.185 21.724 20.852 1.00 0.00 C ATOM 292 CG TYR 57 3.199 22.779 21.232 1.00 0.00 C ATOM 293 CD1 TYR 57 3.463 23.848 20.388 1.00 0.00 C ATOM 294 CD2 TYR 57 3.889 22.701 22.436 1.00 0.00 C ATOM 295 CE1 TYR 57 4.390 24.818 20.728 1.00 0.00 C ATOM 296 CE2 TYR 57 4.817 23.659 22.793 1.00 0.00 C ATOM 297 CZ TYR 57 5.065 24.723 21.927 1.00 0.00 C ATOM 298 OH TYR 57 5.986 25.687 22.266 1.00 0.00 H ATOM 299 O TYR 57 3.886 19.064 21.105 1.00 0.00 O ATOM 300 C TYR 57 3.954 20.033 20.346 1.00 0.00 C ATOM 301 N TYR 58 5.100 20.549 19.921 1.00 0.00 N ATOM 302 CA TYR 58 6.397 20.024 20.325 1.00 0.00 C ATOM 303 CB TYR 58 7.412 20.164 19.188 1.00 0.00 C ATOM 304 CG TYR 58 8.772 19.591 19.506 1.00 0.00 C ATOM 305 CD1 TYR 58 8.975 18.217 19.546 1.00 0.00 C ATOM 306 CD2 TYR 58 9.853 20.425 19.766 1.00 0.00 C ATOM 307 CE1 TYR 58 10.215 17.683 19.836 1.00 0.00 C ATOM 308 CE2 TYR 58 11.102 19.907 20.057 1.00 0.00 C ATOM 309 CZ TYR 58 11.276 18.525 20.091 1.00 0.00 C ATOM 310 OH TYR 58 12.513 17.995 20.380 1.00 0.00 H ATOM 311 O TYR 58 7.218 21.941 21.520 1.00 0.00 O ATOM 312 C TYR 58 6.868 20.761 21.576 1.00 0.00 C ATOM 313 N ALA 59 6.880 20.073 22.723 1.00 0.00 N ATOM 314 CA ALA 59 7.314 20.708 23.966 1.00 0.00 C ATOM 315 CB ALA 59 6.934 19.848 25.163 1.00 0.00 C ATOM 316 O ALA 59 9.618 20.276 23.438 1.00 0.00 O ATOM 317 C ALA 59 8.809 20.990 24.024 1.00 0.00 C TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 316 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 40.23 85.0 80 55.6 144 ARMSMC SECONDARY STRUCTURE . . 8.66 100.0 39 54.2 72 ARMSMC SURFACE . . . . . . . . 32.69 84.3 51 52.0 98 ARMSMC BURIED . . . . . . . . 50.84 86.2 29 63.0 46 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 78.47 57.9 38 56.7 67 ARMSSC1 RELIABLE SIDE CHAINS . 80.62 55.6 36 56.2 64 ARMSSC1 SECONDARY STRUCTURE . . 70.39 63.2 19 59.4 32 ARMSSC1 SURFACE . . . . . . . . 83.99 50.0 26 54.2 48 ARMSSC1 BURIED . . . . . . . . 64.92 75.0 12 63.2 19 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 62.87 64.0 25 52.1 48 ARMSSC2 RELIABLE SIDE CHAINS . 49.50 75.0 16 48.5 33 ARMSSC2 SECONDARY STRUCTURE . . 50.05 66.7 12 50.0 24 ARMSSC2 SURFACE . . . . . . . . 74.40 50.0 16 47.1 34 ARMSSC2 BURIED . . . . . . . . 33.71 88.9 9 64.3 14 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 89.36 22.2 9 47.4 19 ARMSSC3 RELIABLE SIDE CHAINS . 95.32 28.6 7 46.7 15 ARMSSC3 SECONDARY STRUCTURE . . 83.35 25.0 4 36.4 11 ARMSSC3 SURFACE . . . . . . . . 69.21 28.6 7 41.2 17 ARMSSC3 BURIED . . . . . . . . 138.46 0.0 2 100.0 2 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 41.03 75.0 4 44.4 9 ARMSSC4 RELIABLE SIDE CHAINS . 41.03 75.0 4 44.4 9 ARMSSC4 SECONDARY STRUCTURE . . 58.01 50.0 2 28.6 7 ARMSSC4 SURFACE . . . . . . . . 3.28 100.0 3 37.5 8 ARMSSC4 BURIED . . . . . . . . 81.86 0.0 1 100.0 1 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 3.20 (Number of atoms: 41) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 3.20 41 56.2 73 CRMSCA CRN = ALL/NP . . . . . 0.0781 CRMSCA SECONDARY STRUCTURE . . 3.03 20 55.6 36 CRMSCA SURFACE . . . . . . . . 3.18 26 52.0 50 CRMSCA BURIED . . . . . . . . 3.24 15 65.2 23 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 3.22 205 56.3 364 CRMSMC SECONDARY STRUCTURE . . 3.02 100 55.9 179 CRMSMC SURFACE . . . . . . . . 3.24 130 52.0 250 CRMSMC BURIED . . . . . . . . 3.19 75 65.8 114 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 4.80 152 50.8 299 CRMSSC RELIABLE SIDE CHAINS . 5.02 124 50.6 245 CRMSSC SECONDARY STRUCTURE . . 4.00 74 48.4 153 CRMSSC SURFACE . . . . . . . . 5.29 103 49.8 207 CRMSSC BURIED . . . . . . . . 3.55 49 53.3 92 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 4.03 316 53.5 591 CRMSALL SECONDARY STRUCTURE . . 3.48 154 51.9 297 CRMSALL SURFACE . . . . . . . . 4.35 207 50.9 407 CRMSALL BURIED . . . . . . . . 3.34 109 59.2 184 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.729 1.000 0.500 41 56.2 73 ERRCA SECONDARY STRUCTURE . . 2.552 1.000 0.500 20 55.6 36 ERRCA SURFACE . . . . . . . . 2.675 1.000 0.500 26 52.0 50 ERRCA BURIED . . . . . . . . 2.823 1.000 0.500 15 65.2 23 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.728 1.000 0.500 205 56.3 364 ERRMC SECONDARY STRUCTURE . . 2.536 1.000 0.500 100 55.9 179 ERRMC SURFACE . . . . . . . . 2.701 1.000 0.500 130 52.0 250 ERRMC BURIED . . . . . . . . 2.775 1.000 0.500 75 65.8 114 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.938 1.000 0.500 152 50.8 299 ERRSC RELIABLE SIDE CHAINS . 4.064 1.000 0.500 124 50.6 245 ERRSC SECONDARY STRUCTURE . . 3.604 1.000 0.500 74 48.4 153 ERRSC SURFACE . . . . . . . . 4.333 1.000 0.500 103 49.8 207 ERRSC BURIED . . . . . . . . 3.108 1.000 0.500 49 53.3 92 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.276 1.000 0.500 316 53.5 591 ERRALL SECONDARY STRUCTURE . . 2.997 1.000 0.500 154 51.9 297 ERRALL SURFACE . . . . . . . . 3.472 1.000 0.500 207 50.9 407 ERRALL BURIED . . . . . . . . 2.905 1.000 0.500 109 59.2 184 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 3 19 26 34 41 41 73 DISTCA CA (P) 4.11 26.03 35.62 46.58 56.16 73 DISTCA CA (RMS) 0.66 1.35 1.71 2.46 3.20 DISTCA ALL (N) 32 118 168 255 310 316 591 DISTALL ALL (P) 5.41 19.97 28.43 43.15 52.45 591 DISTALL ALL (RMS) 0.68 1.35 1.75 2.75 3.63 DISTALL END of the results output