####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 122 ( 488), selected 122 , name T0639AL396_1-D1 # Molecule2: number of CA atoms 124 ( 1002), selected 122 , name T0639-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0639AL396_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 40 85 - 125 4.95 25.91 LONGEST_CONTINUOUS_SEGMENT: 40 86 - 126 4.36 26.33 LCS_AVERAGE: 22.49 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 27 89 - 115 1.71 24.66 LCS_AVERAGE: 11.34 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 25 90 - 114 0.89 24.89 LCS_AVERAGE: 9.62 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 122 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 3 A 3 3 3 21 0 3 3 3 4 4 6 7 8 14 15 20 22 26 28 34 37 38 42 44 LCS_GDT M 4 M 4 3 4 21 3 3 3 5 6 7 9 12 13 17 20 25 30 31 33 35 38 40 42 45 LCS_GDT E 5 E 5 3 15 21 3 3 9 12 14 15 17 19 19 22 24 27 30 31 33 35 38 40 42 45 LCS_GDT T 6 T 6 13 15 21 8 12 14 15 15 15 17 19 19 22 24 27 30 31 33 35 38 42 45 47 LCS_GDT L 7 L 7 13 15 21 10 12 14 15 15 15 17 19 19 22 24 27 30 32 35 38 43 44 46 48 LCS_GDT N 8 N 8 13 15 21 10 12 14 15 15 15 17 19 19 22 24 27 30 31 33 35 40 41 42 45 LCS_GDT D 9 D 9 13 15 21 10 12 14 15 15 15 17 22 29 30 33 35 37 38 40 40 43 44 46 48 LCS_GDT I 10 I 10 13 15 21 10 12 14 15 18 24 25 28 31 32 35 38 39 40 41 42 43 44 46 48 LCS_GDT K 11 K 11 13 15 21 10 12 14 15 15 15 17 19 29 30 33 33 35 37 38 39 40 44 46 47 LCS_GDT K 12 K 12 13 15 21 10 12 14 15 15 15 17 19 19 22 24 29 33 34 36 39 40 41 42 45 LCS_GDT I 13 I 13 13 15 21 10 12 14 15 15 15 17 19 19 22 24 27 30 31 35 38 40 41 44 47 LCS_GDT L 14 L 14 13 15 21 10 12 14 15 15 15 17 19 19 22 24 27 30 31 33 35 40 41 42 45 LCS_GDT I 15 I 15 13 15 21 10 12 14 15 15 15 17 19 19 22 24 27 30 31 33 35 38 40 42 45 LCS_GDT N 16 N 16 13 15 21 10 12 14 15 15 15 17 19 19 22 24 27 30 31 33 35 38 40 42 45 LCS_GDT V 17 V 17 13 15 21 10 12 14 15 15 15 17 19 19 22 24 27 30 31 33 35 38 40 42 45 LCS_GDT G 18 G 18 13 15 21 10 12 14 15 15 15 17 19 19 22 24 27 30 31 33 35 38 40 42 45 LCS_GDT L 19 L 19 4 15 21 4 4 4 4 5 6 15 18 19 22 24 27 30 31 33 35 38 40 42 45 LCS_GDT Y 20 Y 20 4 15 21 4 4 4 4 5 6 12 15 19 22 24 25 25 26 30 34 37 39 42 45 LCS_GDT Q 21 Q 21 4 5 21 4 4 4 4 5 7 17 19 19 22 24 27 30 31 33 35 38 40 42 45 LCS_GDT G 22 G 22 4 5 21 4 4 4 4 6 12 17 18 19 21 24 27 30 31 33 35 38 40 42 45 LCS_GDT F 23 F 23 3 5 21 3 3 3 4 5 6 8 11 13 15 18 23 26 30 33 35 38 40 42 45 LCS_GDT D 24 D 24 3 5 21 3 3 3 7 9 11 11 13 14 15 17 18 19 23 28 33 38 40 42 45 LCS_GDT L 25 L 25 5 10 21 3 6 8 9 9 10 13 15 15 15 17 18 19 22 24 26 30 33 35 38 LCS_GDT T 26 T 26 7 10 21 3 6 7 8 9 10 13 15 15 15 16 18 19 21 21 24 27 28 32 34 LCS_GDT D 27 D 27 7 10 21 4 7 8 9 9 11 13 15 15 15 17 18 19 22 24 28 30 33 35 37 LCS_GDT P 28 P 28 7 10 21 3 7 8 9 9 11 13 15 15 15 17 18 19 23 25 28 30 33 38 44 LCS_GDT K 29 K 29 7 10 21 3 7 8 9 9 11 13 15 15 15 17 18 19 23 28 33 38 40 42 45 LCS_GDT V 30 V 30 7 10 21 4 7 8 9 9 11 13 15 15 15 17 18 19 23 28 33 38 40 42 45 LCS_GDT S 31 S 31 7 10 21 4 7 8 9 9 11 13 15 15 15 17 18 19 24 28 33 38 40 42 45 LCS_GDT E 32 E 32 7 10 21 4 7 8 9 9 11 13 15 15 15 17 18 20 24 29 34 38 40 42 45 LCS_GDT E 33 E 33 7 10 21 4 7 8 9 9 11 13 15 15 18 20 23 25 30 33 35 38 40 42 45 LCS_GDT V 34 V 34 3 10 21 3 3 3 4 6 9 11 15 15 15 17 23 25 30 33 35 38 40 42 45 LCS_GDT N 35 N 35 5 5 21 5 5 5 7 8 10 13 15 17 19 23 26 30 31 33 35 38 40 42 45 LCS_GDT H 36 H 36 5 5 21 5 5 5 5 6 9 13 15 17 20 23 27 30 31 33 35 38 40 42 45 LCS_GDT E 37 E 37 5 5 21 5 5 5 5 5 7 10 15 15 16 23 24 30 31 33 35 37 40 42 45 LCS_GDT T 38 T 38 5 5 21 5 5 5 5 6 10 13 15 15 15 17 22 25 27 29 32 35 39 41 43 LCS_GDT A 39 A 39 5 5 21 5 5 5 9 9 10 13 15 15 17 18 22 25 27 29 31 35 39 40 43 LCS_GDT N 40 N 40 3 4 21 3 3 4 7 9 11 12 15 18 21 23 27 30 31 33 35 38 40 42 45 LCS_GDT M 41 M 41 4 4 21 3 4 4 4 6 9 12 14 17 22 24 27 30 31 33 35 38 40 42 45 LCS_GDT K 42 K 42 4 4 21 3 4 4 4 6 9 12 14 17 21 24 27 30 31 33 35 38 40 42 45 LCS_GDT W 43 W 43 4 4 21 3 4 4 6 7 7 12 18 19 22 24 27 30 31 33 35 40 41 42 45 LCS_GDT I 44 I 44 4 4 21 3 4 4 6 7 9 12 14 19 22 24 27 30 33 35 38 40 41 42 45 LCS_GDT K 45 K 45 3 4 21 3 3 4 6 7 9 10 12 19 22 24 32 34 35 37 40 42 44 46 48 LCS_GDT D 46 D 46 3 4 21 3 3 5 7 16 24 25 29 31 32 35 38 39 40 41 42 43 44 46 48 LCS_GDT Y 47 Y 47 3 4 21 3 3 3 5 10 13 14 15 16 31 31 33 39 40 41 42 43 44 46 48 LCS_GDT T 48 T 48 4 5 21 4 4 4 5 10 13 14 29 31 32 35 38 39 40 41 42 43 44 46 48 LCS_GDT S 49 S 49 4 5 21 4 4 4 5 6 6 21 24 30 32 35 38 39 40 41 42 43 44 46 48 LCS_GDT D 50 D 50 4 5 21 4 4 4 5 14 15 17 23 29 30 33 37 39 40 41 42 43 44 46 48 LCS_GDT G 51 G 51 4 11 21 4 4 4 5 9 19 27 29 31 33 35 38 39 40 41 42 43 44 46 48 LCS_GDT N 52 N 52 10 11 21 6 9 10 11 12 13 14 15 16 24 33 35 37 40 41 42 43 44 45 48 LCS_GDT W 53 W 53 10 11 21 6 9 10 11 12 12 14 15 16 17 18 22 28 37 38 40 40 42 44 46 LCS_GDT D 54 D 54 10 11 21 6 9 10 11 12 13 14 15 16 17 18 22 25 27 33 36 39 40 42 44 LCS_GDT N 55 N 55 10 11 21 6 9 10 11 12 13 14 15 16 17 18 22 25 27 29 34 37 38 42 44 LCS_GDT E 56 E 56 10 11 21 6 9 10 11 12 13 14 15 16 17 18 22 25 27 30 34 37 38 42 44 LCS_GDT F 57 F 57 10 11 23 6 9 10 11 12 13 14 15 16 17 18 22 25 27 29 32 33 37 42 44 LCS_GDT K 58 K 58 10 11 23 4 9 10 11 12 13 14 15 16 17 18 22 25 27 29 32 36 38 42 44 LCS_GDT E 59 E 59 10 11 23 4 9 10 11 12 13 14 15 16 17 18 19 23 27 30 34 37 38 42 44 LCS_GDT D 60 D 60 10 11 23 4 9 10 11 12 13 14 17 18 19 20 20 21 24 28 30 31 33 35 41 LCS_GDT L 61 L 61 17 18 23 0 4 14 16 17 18 18 18 18 19 20 20 23 27 29 31 31 33 38 42 LCS_GDT K 62 K 62 17 18 23 3 3 16 16 17 18 18 18 18 19 20 22 25 31 32 34 36 39 40 43 LCS_GDT N 63 N 63 17 18 23 14 15 16 16 17 18 18 19 19 21 23 27 30 31 33 35 37 39 42 45 LCS_GDT F 64 F 64 17 18 23 12 15 16 16 17 18 18 19 19 21 23 27 30 31 33 35 38 40 42 45 LCS_GDT L 65 L 65 17 18 23 14 15 16 16 17 18 18 19 19 21 23 27 30 31 33 35 38 40 42 45 LCS_GDT D 66 D 66 17 18 23 14 15 16 16 17 18 18 18 18 19 23 27 30 31 33 35 38 40 42 45 LCS_GDT Y 67 Y 67 17 18 23 14 15 16 16 17 18 18 18 18 19 20 22 25 30 33 35 38 40 42 45 LCS_GDT M 68 M 68 17 18 23 14 15 16 16 17 18 18 18 18 19 20 20 20 21 27 33 38 40 42 45 LCS_GDT E 69 E 69 17 18 23 14 15 16 16 17 18 18 18 18 19 20 20 20 21 22 29 32 40 42 45 LCS_GDT V 70 V 70 17 18 23 14 15 16 16 17 18 18 18 18 19 20 20 20 21 21 22 23 24 30 34 LCS_GDT C 71 C 71 17 18 23 14 15 16 16 17 18 18 18 18 19 20 20 20 21 21 22 23 24 25 26 LCS_GDT Q 72 Q 72 17 18 23 14 15 16 16 17 18 18 18 18 19 20 20 20 21 21 22 23 24 25 26 LCS_GDT L 73 L 73 17 18 23 14 15 16 16 17 18 18 18 18 19 20 20 20 21 21 22 23 24 25 26 LCS_GDT A 74 A 74 17 18 23 14 15 16 16 17 18 18 18 18 19 20 20 20 21 21 22 23 24 25 26 LCS_GDT L 75 L 75 17 18 23 14 15 16 16 17 18 18 18 18 19 20 20 20 21 21 22 23 24 25 26 LCS_GDT N 76 N 76 17 18 23 14 15 16 16 17 18 18 18 18 19 20 20 20 21 21 22 22 23 25 26 LCS_GDT D 77 D 77 17 18 23 14 15 16 16 17 18 18 18 18 19 20 20 20 21 21 22 23 24 25 26 LCS_GDT N 79 N 79 17 18 23 3 4 7 15 17 18 18 18 18 19 20 20 20 21 21 22 23 24 25 26 LCS_GDT F 80 F 80 5 8 23 4 4 5 7 8 9 12 16 17 19 20 20 20 20 20 22 23 24 25 26 LCS_GDT K 81 K 81 5 8 22 4 4 5 7 8 9 10 11 12 13 14 16 18 19 20 21 23 24 25 26 LCS_GDT I 82 I 82 5 8 22 4 4 5 7 8 9 10 11 12 13 14 16 17 18 18 20 23 24 25 26 LCS_GDT A 83 A 83 5 8 19 4 4 5 7 8 9 10 11 12 13 14 16 17 18 18 20 20 24 25 26 LCS_GDT S 84 S 84 4 8 37 3 4 5 7 8 9 10 11 12 13 14 16 17 18 18 20 20 24 31 36 LCS_GDT N 85 N 85 4 8 40 3 4 5 7 8 9 10 11 12 13 14 17 27 31 39 40 43 44 45 48 LCS_GDT S 86 S 86 4 8 40 3 3 4 6 8 9 10 11 12 18 31 35 38 40 41 42 43 44 46 48 LCS_GDT L 87 L 87 3 6 40 2 3 3 4 4 6 11 19 29 33 34 38 39 40 41 42 43 44 46 48 LCS_GDT M 89 M 89 23 27 40 5 12 16 22 26 28 28 30 31 33 35 38 39 40 41 42 43 44 46 48 LCS_GDT A 90 A 90 25 27 40 6 19 25 25 27 28 28 30 31 33 35 38 39 40 41 42 43 44 46 48 LCS_GDT M 91 M 91 25 27 40 6 19 25 25 27 28 28 30 31 33 35 38 39 40 41 42 43 44 46 48 LCS_GDT I 92 I 92 25 27 40 6 19 25 25 27 28 28 30 31 33 35 38 39 40 41 42 43 44 46 48 LCS_GDT Y 93 Y 93 25 27 40 6 19 25 25 27 28 28 30 31 33 35 38 39 40 41 42 43 44 46 48 LCS_GDT A 94 A 94 25 27 40 10 20 25 25 27 28 28 30 31 33 35 38 39 40 41 42 43 44 46 48 LCS_GDT G 95 G 95 25 27 40 9 20 25 25 27 28 28 30 31 33 35 38 39 40 41 42 43 44 46 48 LCS_GDT N 96 N 96 25 27 40 10 20 25 25 27 28 28 30 31 33 35 38 39 40 41 42 43 44 46 48 LCS_GDT L 97 L 97 25 27 40 10 20 25 25 27 28 28 30 31 33 35 38 39 40 41 42 43 44 46 48 LCS_GDT S 98 S 98 25 27 40 13 20 25 25 27 28 28 30 31 33 35 38 39 40 41 42 43 44 46 48 LCS_GDT L 99 L 99 25 27 40 14 20 25 25 27 28 28 30 31 33 35 38 39 40 41 42 43 44 46 48 LCS_GDT I 100 I 100 25 27 40 13 20 25 25 27 28 28 30 31 33 35 38 39 40 41 42 43 44 46 48 LCS_GDT F 101 F 101 25 27 40 10 20 25 25 27 28 28 30 31 33 35 38 39 40 41 42 43 44 46 48 LCS_GDT D 102 D 102 25 27 40 14 20 25 25 27 28 28 30 31 33 35 38 39 40 41 42 43 44 46 48 LCS_GDT S 103 S 103 25 27 40 14 20 25 25 27 28 28 30 31 33 35 38 39 40 41 42 43 44 46 48 LCS_GDT I 104 I 104 25 27 40 14 20 25 25 27 28 28 30 31 33 35 38 39 40 41 42 43 44 46 48 LCS_GDT K 105 K 105 25 27 40 14 20 25 25 27 28 28 30 31 33 35 38 39 40 41 42 43 44 46 48 LCS_GDT T 106 T 106 25 27 40 14 20 25 25 27 28 28 30 31 33 35 38 39 40 41 42 43 44 46 48 LCS_GDT D 107 D 107 25 27 40 14 20 25 25 27 28 28 30 31 33 35 38 39 40 41 42 43 44 46 48 LCS_GDT I 108 I 108 25 27 40 14 20 25 25 27 28 28 30 31 33 35 38 39 40 41 42 43 44 46 48 LCS_GDT S 109 S 109 25 27 40 14 20 25 25 27 28 28 30 31 33 35 38 39 40 41 42 43 44 46 48 LCS_GDT T 110 T 110 25 27 40 14 20 25 25 27 28 28 30 31 33 35 38 39 40 41 42 43 44 46 48 LCS_GDT L 111 L 111 25 27 40 14 20 25 25 27 28 28 30 31 33 35 38 39 40 41 42 43 44 46 48 LCS_GDT L 112 L 112 25 27 40 14 20 25 25 27 28 28 30 31 33 35 38 39 40 41 42 43 44 46 48 LCS_GDT S 113 S 113 25 27 40 14 20 25 25 27 28 28 30 31 33 35 38 39 40 41 42 43 44 46 48 LCS_GDT A 114 A 114 25 27 40 14 20 25 25 27 28 28 30 31 33 35 38 39 40 41 42 43 44 46 48 LCS_GDT E 115 E 115 4 27 40 4 5 5 7 7 7 10 15 22 31 34 38 39 40 41 42 43 44 46 48 LCS_GDT Y 116 Y 116 4 5 40 4 5 5 7 7 12 16 18 23 29 34 37 39 40 41 42 43 44 46 48 LCS_GDT K 117 K 117 4 5 40 4 5 5 7 15 20 25 30 31 33 35 38 39 40 41 42 43 44 46 48 LCS_GDT K 118 K 118 3 5 40 3 3 4 7 8 16 25 30 31 33 35 38 39 40 41 42 43 44 46 48 LCS_GDT N 119 N 119 3 5 40 3 3 3 7 15 19 25 30 31 33 35 38 39 40 41 42 43 44 46 48 LCS_GDT S 120 S 120 4 5 40 3 4 10 24 27 28 28 30 31 33 35 38 39 40 41 42 43 44 46 48 LCS_GDT F 121 F 121 4 5 40 3 4 14 24 27 28 28 30 31 33 35 38 39 40 41 42 43 44 46 48 LCS_GDT S 122 S 122 4 5 40 3 4 4 4 13 16 23 28 29 32 34 37 38 39 40 40 43 44 45 48 LCS_GDT W 123 W 123 4 5 40 3 4 6 11 13 20 24 28 29 32 34 37 38 39 40 40 40 40 43 46 LCS_GDT P 124 P 124 3 4 40 3 3 6 9 13 20 24 28 29 32 34 37 38 39 40 40 40 40 40 41 LCS_GDT S 125 S 125 3 4 40 3 3 3 3 5 6 16 24 29 31 34 37 38 39 40 40 40 40 40 41 LCS_GDT L 126 L 126 3 4 40 3 3 3 3 5 6 10 13 21 29 34 37 38 39 40 40 40 40 40 41 LCS_AVERAGE LCS_A: 14.49 ( 9.62 11.34 22.49 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 14 20 25 25 27 28 28 30 31 33 35 38 39 40 41 42 43 44 46 48 GDT PERCENT_AT 11.29 16.13 20.16 20.16 21.77 22.58 22.58 24.19 25.00 26.61 28.23 30.65 31.45 32.26 33.06 33.87 34.68 35.48 37.10 38.71 GDT RMS_LOCAL 0.27 0.55 0.89 0.89 1.11 1.24 1.24 2.09 2.26 2.79 3.00 3.44 3.46 3.65 3.82 4.01 4.23 4.56 4.85 5.34 GDT RMS_ALL_AT 43.51 25.22 24.89 24.89 24.78 24.68 24.68 24.64 24.69 24.32 24.17 24.08 24.16 24.11 24.10 24.07 24.07 24.05 23.99 23.99 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA A 3 A 3 18.127 1 0.575 0.575 19.018 0.000 0.000 LGA M 4 M 4 18.715 4 0.573 0.573 18.817 0.000 0.000 LGA E 5 E 5 19.921 5 0.206 0.206 19.921 0.000 0.000 LGA T 6 T 6 16.422 3 0.526 0.526 17.460 0.000 0.000 LGA L 7 L 7 14.400 4 0.030 0.030 15.624 0.000 0.000 LGA N 8 N 8 19.141 4 0.029 0.029 19.141 0.000 0.000 LGA D 9 D 9 16.580 4 0.046 0.046 17.403 0.000 0.000 LGA I 10 I 10 10.507 4 0.034 0.034 12.556 0.000 0.000 LGA K 11 K 11 14.918 5 0.020 0.020 17.479 0.000 0.000 LGA K 12 K 12 20.288 5 0.063 0.063 21.115 0.000 0.000 LGA I 13 I 13 16.742 4 0.131 0.131 18.620 0.000 0.000 LGA L 14 L 14 15.397 4 0.033 0.033 19.324 0.000 0.000 LGA I 15 I 15 21.882 4 0.022 0.022 25.385 0.000 0.000 LGA N 16 N 16 25.604 4 0.085 0.085 27.648 0.000 0.000 LGA V 17 V 17 23.434 3 0.043 0.043 26.804 0.000 0.000 LGA G 18 G 18 25.411 0 0.014 0.014 29.947 0.000 0.000 LGA L 19 L 19 32.916 4 0.046 0.046 37.011 0.000 0.000 LGA Y 20 Y 20 36.879 8 0.076 0.076 40.385 0.000 0.000 LGA Q 21 Q 21 38.575 5 0.026 0.026 41.313 0.000 0.000 LGA G 22 G 22 41.170 0 0.182 0.182 43.452 0.000 0.000 LGA F 23 F 23 41.522 7 0.674 0.674 42.566 0.000 0.000 LGA D 24 D 24 42.851 4 0.493 0.493 43.628 0.000 0.000 LGA L 25 L 25 39.365 4 0.678 0.678 40.356 0.000 0.000 LGA T 26 T 26 42.610 3 0.235 0.235 43.876 0.000 0.000 LGA D 27 D 27 43.872 4 0.179 0.179 43.872 0.000 0.000 LGA P 28 P 28 39.510 3 0.154 0.154 41.441 0.000 0.000 LGA K 29 K 29 41.458 5 0.185 0.185 41.458 0.000 0.000 LGA V 30 V 30 40.663 3 0.037 0.037 41.160 0.000 0.000 LGA S 31 S 31 34.118 2 0.128 0.128 36.724 0.000 0.000 LGA E 32 E 32 31.598 5 0.255 0.255 33.143 0.000 0.000 LGA E 33 E 33 35.134 5 0.599 0.599 35.134 0.000 0.000 LGA V 34 V 34 34.872 3 0.553 0.553 35.298 0.000 0.000 LGA N 35 N 35 32.553 4 0.602 0.602 33.056 0.000 0.000 LGA H 36 H 36 34.824 6 0.073 0.073 35.494 0.000 0.000 LGA E 37 E 37 37.711 5 0.121 0.121 37.711 0.000 0.000 LGA T 38 T 38 32.497 3 0.207 0.207 34.252 0.000 0.000 LGA A 39 A 39 28.416 1 0.276 0.276 30.212 0.000 0.000 LGA N 40 N 40 26.292 4 0.613 0.613 27.487 0.000 0.000 LGA M 41 M 41 25.215 4 0.602 0.602 25.522 0.000 0.000 LGA K 42 K 42 22.106 5 0.063 0.063 23.453 0.000 0.000 LGA W 43 W 43 16.727 10 0.599 0.599 18.854 0.000 0.000 LGA I 44 I 44 16.795 4 0.045 0.045 16.795 0.000 0.000 LGA K 45 K 45 12.932 5 0.563 0.563 14.203 0.000 0.000 LGA D 46 D 46 9.563 4 0.599 0.599 10.344 7.262 3.631 LGA Y 47 Y 47 8.299 8 0.129 0.129 9.115 4.048 1.349 LGA T 48 T 48 11.293 3 0.579 0.579 11.293 0.833 0.476 LGA S 49 S 49 10.272 2 0.181 0.181 10.549 0.714 0.476 LGA D 50 D 50 8.814 4 0.137 0.137 9.290 3.571 1.786 LGA G 51 G 51 7.331 0 0.602 0.602 8.219 8.810 8.810 LGA N 52 N 52 10.731 4 0.582 0.582 14.619 0.119 0.060 LGA W 53 W 53 12.370 10 0.034 0.034 16.293 0.000 0.000 LGA D 54 D 54 15.324 4 0.046 0.046 19.672 0.000 0.000 LGA N 55 N 55 18.637 4 0.019 0.019 23.096 0.000 0.000 LGA E 56 E 56 21.882 5 0.013 0.013 25.859 0.000 0.000 LGA F 57 F 57 23.971 7 0.089 0.089 28.426 0.000 0.000 LGA K 58 K 58 27.587 5 0.105 0.105 31.871 0.000 0.000 LGA E 59 E 59 31.337 5 0.187 0.187 35.571 0.000 0.000 LGA D 60 D 60 33.656 4 0.573 0.573 35.807 0.000 0.000 LGA L 61 L 61 37.446 4 0.589 0.589 39.312 0.000 0.000 LGA K 62 K 62 39.697 5 0.467 0.467 39.697 0.000 0.000 LGA N 63 N 63 37.743 4 0.151 0.151 38.270 0.000 0.000 LGA F 64 F 64 36.992 7 0.036 0.036 37.269 0.000 0.000 LGA L 65 L 65 38.187 4 0.021 0.021 38.363 0.000 0.000 LGA D 66 D 66 38.599 4 0.071 0.071 38.599 0.000 0.000 LGA Y 67 Y 67 37.752 8 0.055 0.055 37.934 0.000 0.000 LGA M 68 M 68 37.826 4 0.064 0.064 37.921 0.000 0.000 LGA E 69 E 69 38.351 5 0.051 0.051 38.351 0.000 0.000 LGA V 70 V 70 38.309 3 0.072 0.072 38.309 0.000 0.000 LGA C 71 C 71 37.549 2 0.027 0.027 37.754 0.000 0.000 LGA Q 72 Q 72 38.046 5 0.048 0.048 38.129 0.000 0.000 LGA L 73 L 73 38.412 4 0.042 0.042 38.412 0.000 0.000 LGA A 74 A 74 37.779 1 0.030 0.030 37.940 0.000 0.000 LGA L 75 L 75 37.607 4 0.024 0.024 37.737 0.000 0.000 LGA N 76 N 76 38.181 4 0.015 0.015 38.308 0.000 0.000 LGA D 77 D 77 38.249 4 0.152 0.152 38.249 0.000 0.000 LGA N 79 N 79 34.546 4 0.484 0.484 36.136 0.000 0.000 LGA F 80 F 80 31.398 7 0.094 0.094 33.070 0.000 0.000 LGA K 81 K 81 29.577 5 0.030 0.030 30.873 0.000 0.000 LGA I 82 I 82 23.339 4 0.516 0.516 25.989 0.000 0.000 LGA A 83 A 83 21.416 1 0.173 0.173 22.624 0.000 0.000 LGA S 84 S 84 19.389 2 0.409 0.409 20.459 0.000 0.000 LGA N 85 N 85 15.238 4 0.032 0.032 17.027 0.000 0.000 LGA S 86 S 86 9.683 2 0.602 0.602 12.005 3.095 2.063 LGA L 87 L 87 8.789 4 0.193 0.193 8.871 6.429 3.214 LGA M 89 M 89 3.099 4 0.608 0.608 4.399 56.190 28.095 LGA A 90 A 90 1.672 1 0.056 0.056 2.057 77.381 61.905 LGA M 91 M 91 0.638 4 0.055 0.055 0.782 90.476 45.238 LGA I 92 I 92 0.987 4 0.035 0.035 0.987 90.476 45.238 LGA Y 93 Y 93 1.338 8 0.070 0.070 1.338 85.952 28.651 LGA A 94 A 94 0.668 1 0.021 0.021 0.868 90.476 72.381 LGA G 95 G 95 0.812 0 0.060 0.060 0.845 90.476 90.476 LGA N 96 N 96 0.728 4 0.050 0.050 0.900 90.476 45.238 LGA L 97 L 97 0.703 4 0.045 0.045 1.193 88.214 44.107 LGA S 98 S 98 0.862 2 0.075 0.075 1.754 83.810 55.873 LGA L 99 L 99 1.486 4 0.100 0.100 1.670 77.143 38.571 LGA I 100 I 100 1.754 4 0.017 0.017 1.754 75.000 37.500 LGA F 101 F 101 1.242 7 0.050 0.050 1.312 85.952 31.255 LGA D 102 D 102 0.717 4 0.029 0.029 0.874 90.476 45.238 LGA S 103 S 103 1.005 2 0.077 0.077 1.005 88.214 58.810 LGA I 104 I 104 0.991 4 0.047 0.047 0.991 90.476 45.238 LGA K 105 K 105 0.478 5 0.037 0.037 0.597 97.619 43.386 LGA T 106 T 106 0.238 3 0.016 0.016 0.484 100.000 57.143 LGA D 107 D 107 1.040 4 0.037 0.037 1.557 81.548 40.774 LGA I 108 I 108 1.246 4 0.019 0.019 1.431 81.429 40.714 LGA S 109 S 109 1.079 2 0.060 0.060 1.535 81.548 54.365 LGA T 110 T 110 1.014 3 0.122 0.122 1.290 83.690 47.823 LGA L 111 L 111 2.276 4 0.052 0.052 2.632 64.881 32.440 LGA L 112 L 112 2.571 4 0.098 0.098 3.257 57.262 28.631 LGA S 113 S 113 1.828 2 0.138 0.138 2.065 70.833 47.222 LGA A 114 A 114 1.971 1 0.394 0.394 2.502 66.905 53.524 LGA E 115 E 115 7.008 5 0.043 0.043 8.820 13.571 6.032 LGA Y 116 Y 116 8.692 8 0.255 0.255 9.859 5.357 1.786 LGA K 117 K 117 5.545 5 0.683 0.683 5.623 22.619 10.053 LGA K 118 K 118 5.775 5 0.495 0.495 7.621 16.786 7.460 LGA N 119 N 119 5.767 4 0.606 0.606 5.767 26.548 13.274 LGA S 120 S 120 2.311 2 0.100 0.100 4.942 54.762 36.508 LGA F 121 F 121 2.729 7 0.465 0.465 6.852 40.357 14.675 LGA S 122 S 122 8.839 2 0.668 0.668 10.744 5.119 3.413 LGA W 123 W 123 10.101 10 0.662 0.662 12.437 0.357 0.102 LGA P 124 P 124 12.037 3 0.632 0.632 14.630 0.000 0.000 LGA S 125 S 125 19.318 2 0.696 0.696 20.799 0.000 0.000 LGA L 126 L 126 20.874 4 0.575 0.575 22.215 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 122 488 488 100.00 982 488 49.69 124 SUMMARY(RMSD_GDC): 20.009 19.991 19.991 19.010 10.766 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 122 124 4.0 30 2.09 23.589 21.034 1.369 LGA_LOCAL RMSD: 2.092 Number of atoms: 30 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 24.642 Number of assigned atoms: 122 Std_ASGN_ATOMS RMSD: 20.009 Standard rmsd on all 122 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.086073 * X + 0.795103 * Y + -0.600335 * Z + 4.107893 Y_new = -0.671412 * X + -0.491479 * Y + -0.554667 * Z + 31.973993 Z_new = -0.736069 * X + 0.355331 * Y + 0.576144 * Z + 39.149330 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.698297 0.827245 0.552637 [DEG: -97.3053 47.3976 31.6638 ] ZXZ: -0.824918 0.956793 -1.121051 [DEG: -47.2643 54.8202 -64.2315 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0639AL396_1-D1 REMARK 2: T0639-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0639AL396_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 122 124 4.0 30 2.09 21.034 20.01 REMARK ---------------------------------------------------------- MOLECULE T0639AL396_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK Aligment from pdb entry: 1aep ATOM 5 N ALA 3 32.865 12.179 34.676 1.00 0.00 N ATOM 6 CA ALA 3 31.431 12.128 34.710 1.00 0.00 C ATOM 7 C ALA 3 30.939 12.981 33.559 1.00 0.00 C ATOM 8 O ALA 3 30.043 12.597 32.805 1.00 0.00 O ATOM 9 N MET 4 31.593 14.123 33.429 1.00 0.00 N ATOM 10 CA MET 4 31.326 15.056 32.370 1.00 0.00 C ATOM 11 C MET 4 31.230 14.320 31.053 1.00 0.00 C ATOM 12 O MET 4 30.258 14.455 30.303 1.00 0.00 O ATOM 13 N GLU 5 32.245 13.516 30.805 1.00 0.00 N ATOM 14 CA GLU 5 32.246 12.752 29.584 1.00 0.00 C ATOM 15 C GLU 5 31.034 11.879 29.473 1.00 0.00 C ATOM 16 O GLU 5 30.252 11.987 28.521 1.00 0.00 O ATOM 17 N THR 6 30.914 10.988 30.451 1.00 0.00 N ATOM 18 CA THR 6 29.803 10.066 30.502 1.00 0.00 C ATOM 19 C THR 6 28.487 10.764 30.188 1.00 0.00 C ATOM 20 O THR 6 27.722 10.362 29.308 1.00 0.00 O ATOM 21 N LEU 7 28.286 11.849 30.907 1.00 0.00 N ATOM 22 CA LEU 7 27.099 12.628 30.776 1.00 0.00 C ATOM 23 C LEU 7 26.933 13.246 29.404 1.00 0.00 C ATOM 24 O LEU 7 25.814 13.453 28.945 1.00 0.00 O ATOM 25 N ASN 8 28.052 13.514 28.748 1.00 0.00 N ATOM 26 CA ASN 8 28.010 14.111 27.434 1.00 0.00 C ATOM 27 C ASN 8 27.588 13.079 26.397 1.00 0.00 C ATOM 28 O ASN 8 26.835 13.336 25.456 1.00 0.00 O ATOM 29 N ASP 9 28.064 11.874 26.637 1.00 0.00 N ATOM 30 CA ASP 9 27.758 10.775 25.786 1.00 0.00 C ATOM 31 C ASP 9 26.298 10.359 25.937 1.00 0.00 C ATOM 32 O ASP 9 25.640 9.922 25.002 1.00 0.00 O ATOM 33 N ILE 10 25.791 10.526 27.141 1.00 0.00 N ATOM 34 CA ILE 10 24.413 10.225 27.450 1.00 0.00 C ATOM 35 C ILE 10 23.471 11.111 26.646 1.00 0.00 C ATOM 36 O ILE 10 22.493 10.665 26.036 1.00 0.00 O ATOM 37 N LYS 11 23.802 12.390 26.669 1.00 0.00 N ATOM 38 CA LYS 11 23.058 13.430 26.002 1.00 0.00 C ATOM 39 C LYS 11 22.916 13.165 24.524 1.00 0.00 C ATOM 40 O LYS 11 21.827 13.250 23.943 1.00 0.00 O ATOM 41 N LYS 12 24.026 12.870 23.901 1.00 0.00 N ATOM 42 CA LYS 12 23.948 12.617 22.496 1.00 0.00 C ATOM 43 C LYS 12 23.000 11.467 22.255 1.00 0.00 C ATOM 44 O LYS 12 22.104 11.528 21.409 1.00 0.00 O ATOM 45 N ILE 13 23.229 10.423 23.026 1.00 0.00 N ATOM 46 CA ILE 13 22.404 9.244 22.921 1.00 0.00 C ATOM 47 C ILE 13 20.949 9.654 23.002 1.00 0.00 C ATOM 48 O ILE 13 20.185 9.486 22.059 1.00 0.00 O ATOM 49 N LEU 14 20.589 10.221 24.131 1.00 0.00 N ATOM 50 CA LEU 14 19.213 10.653 24.338 1.00 0.00 C ATOM 51 C LEU 14 18.640 11.501 23.205 1.00 0.00 C ATOM 52 O LEU 14 17.519 11.265 22.750 1.00 0.00 O ATOM 53 N ILE 15 19.399 12.503 22.776 1.00 0.00 N ATOM 54 CA ILE 15 18.903 13.378 21.732 1.00 0.00 C ATOM 55 C ILE 15 18.408 12.631 20.494 1.00 0.00 C ATOM 56 O ILE 15 17.323 12.897 19.966 1.00 0.00 O ATOM 57 N ASN 16 19.241 11.713 20.027 1.00 0.00 N ATOM 58 CA ASN 16 18.974 10.885 18.871 1.00 0.00 C ATOM 59 C ASN 16 17.734 10.000 19.064 1.00 0.00 C ATOM 60 O ASN 16 16.786 10.069 18.282 1.00 0.00 O ATOM 61 N VAL 17 17.753 9.214 20.162 1.00 0.00 N ATOM 62 CA VAL 17 16.664 8.352 20.593 1.00 0.00 C ATOM 63 C VAL 17 15.354 9.095 20.487 1.00 0.00 C ATOM 64 O VAL 17 14.401 8.608 19.905 1.00 0.00 O ATOM 65 N GLY 18 15.325 10.314 21.019 1.00 0.00 N ATOM 66 CA GLY 18 14.126 11.130 20.922 1.00 0.00 C ATOM 67 C GLY 18 13.722 11.475 19.487 1.00 0.00 C ATOM 68 O GLY 18 12.541 11.452 19.166 1.00 0.00 O ATOM 69 N LEU 19 11.752 8.668 18.035 1.00 0.00 N ATOM 70 CA LEU 19 10.455 8.463 18.603 1.00 0.00 C ATOM 71 C LEU 19 9.373 8.806 17.583 1.00 0.00 C ATOM 72 O LEU 19 8.376 8.093 17.445 1.00 0.00 O ATOM 73 N TYR 20 9.616 9.893 16.834 1.00 0.00 N ATOM 74 CA TYR 20 8.730 10.436 15.769 1.00 0.00 C ATOM 75 C TYR 20 8.519 9.489 14.594 1.00 0.00 C ATOM 76 O TYR 20 7.595 9.645 13.794 1.00 0.00 O ATOM 77 N GLN 21 9.388 8.518 14.456 1.00 0.00 N ATOM 78 CA GLN 21 9.222 7.634 13.348 1.00 0.00 C ATOM 79 C GLN 21 8.337 6.472 13.708 1.00 0.00 C ATOM 80 O GLN 21 8.144 5.559 12.904 1.00 0.00 O ATOM 81 N GLY 22 7.827 6.497 14.939 1.00 0.00 N ATOM 82 CA GLY 22 6.954 5.430 15.380 1.00 0.00 C ATOM 83 C GLY 22 5.618 5.622 14.690 1.00 0.00 C ATOM 84 O GLY 22 4.805 4.714 14.604 1.00 0.00 O ATOM 85 N PHE 23 5.419 6.840 14.195 1.00 0.00 N ATOM 86 CA PHE 23 4.198 7.243 13.518 1.00 0.00 C ATOM 87 C PHE 23 4.038 6.669 12.114 1.00 0.00 C ATOM 88 O PHE 23 2.955 6.726 11.520 1.00 0.00 O ATOM 89 N ASP 24 5.133 6.132 11.590 1.00 0.00 N ATOM 90 CA ASP 24 5.167 5.548 10.258 1.00 0.00 C ATOM 91 C ASP 24 4.852 4.062 10.252 1.00 0.00 C ATOM 92 O ASP 24 4.879 3.403 9.207 1.00 0.00 O ATOM 93 N LEU 25 4.546 3.543 11.432 1.00 0.00 N ATOM 94 CA LEU 25 4.201 2.152 11.610 1.00 0.00 C ATOM 95 C LEU 25 2.854 1.849 10.999 1.00 0.00 C ATOM 96 O LEU 25 2.009 2.734 10.866 1.00 0.00 O ATOM 97 N THR 26 2.661 0.578 10.652 1.00 0.00 N ATOM 98 CA THR 26 1.425 0.111 10.058 1.00 0.00 C ATOM 99 C THR 26 0.166 0.657 10.723 1.00 0.00 C ATOM 100 O THR 26 -0.623 1.355 10.100 1.00 0.00 O ATOM 101 N ASP 27 -0.024 0.325 11.998 1.00 0.00 N ATOM 102 CA ASP 27 -1.190 0.806 12.716 1.00 0.00 C ATOM 103 C ASP 27 -0.832 1.802 13.790 1.00 0.00 C ATOM 104 O ASP 27 0.337 1.864 14.222 1.00 0.00 O ATOM 105 N PRO 28 -1.808 2.624 14.172 1.00 0.00 N ATOM 106 CA PRO 28 -1.637 3.606 15.225 1.00 0.00 C ATOM 107 C PRO 28 -1.727 2.870 16.563 1.00 0.00 C ATOM 108 O PRO 28 -1.512 3.422 17.635 1.00 0.00 O ATOM 109 N LYS 29 -1.998 1.553 16.470 1.00 0.00 N ATOM 110 CA LYS 29 -2.083 0.629 17.603 1.00 0.00 C ATOM 111 C LYS 29 -0.736 -0.069 17.845 1.00 0.00 C ATOM 112 O LYS 29 -0.213 -0.137 18.958 1.00 0.00 O ATOM 113 N VAL 30 -0.193 -0.602 16.773 1.00 0.00 N ATOM 114 CA VAL 30 1.075 -1.288 16.806 1.00 0.00 C ATOM 115 C VAL 30 2.112 -0.435 17.493 1.00 0.00 C ATOM 116 O VAL 30 2.842 -0.870 18.387 1.00 0.00 O ATOM 117 N SER 31 2.187 0.787 17.017 1.00 0.00 N ATOM 118 CA SER 31 3.129 1.737 17.533 1.00 0.00 C ATOM 119 C SER 31 2.901 2.020 19.002 1.00 0.00 C ATOM 120 O SER 31 3.832 2.055 19.803 1.00 0.00 O ATOM 121 N GLU 32 1.638 2.230 19.347 1.00 0.00 N ATOM 122 CA GLU 32 1.297 2.526 20.723 1.00 0.00 C ATOM 123 C GLU 32 1.771 1.469 21.687 1.00 0.00 C ATOM 124 O GLU 32 2.192 1.757 22.803 1.00 0.00 O ATOM 125 N GLU 33 1.683 0.222 21.250 1.00 0.00 N ATOM 126 CA GLU 33 2.063 -0.910 22.044 1.00 0.00 C ATOM 127 C GLU 33 3.574 -0.999 22.131 1.00 0.00 C ATOM 128 O GLU 33 4.166 -1.281 23.186 1.00 0.00 O ATOM 129 N VAL 34 4.186 -0.682 20.990 1.00 0.00 N ATOM 130 CA VAL 34 5.627 -0.666 20.908 1.00 0.00 C ATOM 131 C VAL 34 6.182 0.344 21.924 1.00 0.00 C ATOM 132 O VAL 34 6.962 0.043 22.835 1.00 0.00 O ATOM 133 N ASN 35 5.736 1.573 21.785 1.00 0.00 N ATOM 134 CA ASN 35 6.120 2.643 22.655 1.00 0.00 C ATOM 135 C ASN 35 5.917 2.326 24.142 1.00 0.00 C ATOM 136 O ASN 35 6.816 2.507 24.972 1.00 0.00 O ATOM 137 N HIS 36 4.710 1.899 24.465 1.00 0.00 N ATOM 138 CA HIS 36 4.412 1.646 25.841 1.00 0.00 C ATOM 139 C HIS 36 5.395 0.705 26.440 1.00 0.00 C ATOM 140 O HIS 36 5.849 0.876 27.566 1.00 0.00 O ATOM 141 N GLU 37 5.720 -0.266 25.620 1.00 0.00 N ATOM 142 CA GLU 37 6.666 -1.284 25.998 1.00 0.00 C ATOM 143 C GLU 37 8.019 -0.697 26.272 1.00 0.00 C ATOM 144 O GLU 37 8.603 -0.863 27.340 1.00 0.00 O ATOM 145 N THR 38 8.521 -0.004 25.276 1.00 0.00 N ATOM 146 CA THR 38 9.808 0.628 25.391 1.00 0.00 C ATOM 147 C THR 38 9.881 1.558 26.588 1.00 0.00 C ATOM 148 O THR 38 10.850 1.557 27.354 1.00 0.00 O ATOM 149 N ALA 39 8.852 2.363 26.729 1.00 0.00 N ATOM 150 CA ALA 39 8.819 3.260 27.843 1.00 0.00 C ATOM 151 C ALA 39 8.943 2.484 29.142 1.00 0.00 C ATOM 152 O ALA 39 9.614 2.883 30.085 1.00 0.00 O ATOM 153 N ASN 40 8.293 1.340 29.183 1.00 0.00 N ATOM 154 CA ASN 40 8.346 0.575 30.383 1.00 0.00 C ATOM 155 C ASN 40 9.698 -0.025 30.629 1.00 0.00 C ATOM 156 O ASN 40 10.142 -0.145 31.758 1.00 0.00 O ATOM 157 N MET 41 10.357 -0.408 29.550 1.00 0.00 N ATOM 158 CA MET 41 11.678 -0.989 29.690 1.00 0.00 C ATOM 159 C MET 41 12.670 0.023 30.263 1.00 0.00 C ATOM 160 O MET 41 13.490 -0.287 31.127 1.00 0.00 O ATOM 161 N LYS 42 12.561 1.249 29.775 1.00 0.00 N ATOM 162 CA LYS 42 13.394 2.337 30.191 1.00 0.00 C ATOM 163 C LYS 42 13.167 2.662 31.624 1.00 0.00 C ATOM 164 O LYS 42 14.072 2.699 32.474 1.00 0.00 O ATOM 165 N TRP 43 11.896 2.924 31.876 1.00 0.00 N ATOM 166 CA TRP 43 11.482 3.287 33.207 1.00 0.00 C ATOM 167 C TRP 43 12.100 2.316 34.188 1.00 0.00 C ATOM 168 O TRP 43 12.586 2.665 35.260 1.00 0.00 O ATOM 169 N ILE 44 12.047 1.052 33.797 1.00 0.00 N ATOM 170 CA ILE 44 12.533 -0.054 34.628 1.00 0.00 C ATOM 171 C ILE 44 13.987 0.080 34.982 1.00 0.00 C ATOM 172 O ILE 44 14.413 -0.163 36.100 1.00 0.00 O ATOM 173 N LYS 45 14.758 0.406 33.961 1.00 0.00 N ATOM 174 CA LYS 45 16.174 0.576 34.103 1.00 0.00 C ATOM 175 C LYS 45 16.528 1.810 34.944 1.00 0.00 C ATOM 176 O LYS 45 17.344 1.712 35.855 1.00 0.00 O ATOM 177 N ASP 46 15.927 2.969 34.641 1.00 0.00 N ATOM 178 CA ASP 46 16.159 4.209 35.382 1.00 0.00 C ATOM 179 C ASP 46 15.835 4.082 36.860 1.00 0.00 C ATOM 180 O ASP 46 16.475 4.640 37.754 1.00 0.00 O ATOM 181 N TYR 47 14.818 3.316 37.129 1.00 0.00 N ATOM 182 CA TYR 47 14.471 3.091 38.496 1.00 0.00 C ATOM 183 C TYR 47 15.530 2.216 39.191 1.00 0.00 C ATOM 184 O TYR 47 15.743 2.275 40.403 1.00 0.00 O ATOM 185 N THR 48 16.212 1.384 38.408 1.00 0.00 N ATOM 186 CA THR 48 17.240 0.522 38.957 1.00 0.00 C ATOM 187 C THR 48 18.373 1.338 39.518 1.00 0.00 C ATOM 188 O THR 48 18.855 1.087 40.624 1.00 0.00 O ATOM 189 N SER 49 18.795 2.311 38.706 1.00 0.00 N ATOM 190 CA SER 49 19.849 3.253 38.988 1.00 0.00 C ATOM 191 C SER 49 19.504 4.018 40.234 1.00 0.00 C ATOM 192 O SER 49 20.252 4.055 41.217 1.00 0.00 O ATOM 193 N ASP 50 18.322 4.623 40.207 1.00 0.00 N ATOM 194 CA ASP 50 17.829 5.366 41.339 1.00 0.00 C ATOM 195 C ASP 50 18.003 4.614 42.645 1.00 0.00 C ATOM 196 O ASP 50 18.422 5.162 43.654 1.00 0.00 O ATOM 197 N GLY 51 17.685 3.322 42.611 1.00 0.00 N ATOM 198 CA GLY 51 17.804 2.463 43.772 1.00 0.00 C ATOM 199 C GLY 51 19.232 2.182 44.167 1.00 0.00 C ATOM 200 O GLY 51 19.606 2.151 45.325 1.00 0.00 O ATOM 201 N ASN 52 20.068 2.023 43.191 1.00 0.00 N ATOM 202 CA ASN 52 21.422 1.749 43.567 1.00 0.00 C ATOM 203 C ASN 52 22.166 2.978 44.066 1.00 0.00 C ATOM 204 O ASN 52 23.104 2.883 44.848 1.00 0.00 O ATOM 205 N TRP 53 21.743 4.145 43.635 1.00 0.00 N ATOM 206 CA TRP 53 22.355 5.388 44.058 1.00 0.00 C ATOM 207 C TRP 53 21.832 5.765 45.429 1.00 0.00 C ATOM 208 O TRP 53 22.511 6.383 46.234 1.00 0.00 O ATOM 209 N ASP 54 20.586 5.402 45.697 1.00 0.00 N ATOM 210 CA ASP 54 20.040 5.694 46.991 1.00 0.00 C ATOM 211 C ASP 54 20.899 4.959 48.043 1.00 0.00 C ATOM 212 O ASP 54 21.184 5.454 49.124 1.00 0.00 O ATOM 213 N ASN 55 21.293 3.749 47.664 1.00 0.00 N ATOM 214 CA ASN 55 22.085 2.856 48.503 1.00 0.00 C ATOM 215 C ASN 55 23.455 3.390 48.797 1.00 0.00 C ATOM 216 O ASN 55 24.006 3.290 49.896 1.00 0.00 O ATOM 217 N GLU 56 23.997 3.968 47.767 1.00 0.00 N ATOM 218 CA GLU 56 25.289 4.556 47.886 1.00 0.00 C ATOM 219 C GLU 56 25.255 5.706 48.880 1.00 0.00 C ATOM 220 O GLU 56 26.104 5.829 49.762 1.00 0.00 O ATOM 221 N PHE 57 24.242 6.547 48.722 1.00 0.00 N ATOM 222 CA PHE 57 24.098 7.711 49.558 1.00 0.00 C ATOM 223 C PHE 57 24.139 7.334 51.022 1.00 0.00 C ATOM 224 O PHE 57 24.607 8.089 51.863 1.00 0.00 O ATOM 225 N LYS 58 23.627 6.157 51.296 1.00 0.00 N ATOM 226 CA LYS 58 23.556 5.662 52.638 1.00 0.00 C ATOM 227 C LYS 58 24.916 5.476 53.238 1.00 0.00 C ATOM 228 O LYS 58 25.041 5.355 54.452 1.00 0.00 O ATOM 229 N GLU 59 25.921 5.392 52.386 1.00 0.00 N ATOM 230 CA GLU 59 27.269 5.157 52.888 1.00 0.00 C ATOM 231 C GLU 59 28.096 6.391 53.147 1.00 0.00 C ATOM 232 O GLU 59 29.142 6.308 53.778 1.00 0.00 O ATOM 233 N ASP 60 27.637 7.529 52.649 1.00 0.00 N ATOM 234 CA ASP 60 28.384 8.745 52.824 1.00 0.00 C ATOM 235 C ASP 60 27.740 9.694 53.813 1.00 0.00 C ATOM 236 O ASP 60 26.619 9.447 54.245 1.00 0.00 O ATOM 237 N LEU 61 28.469 10.736 54.191 1.00 0.00 N ATOM 238 CA LEU 61 27.984 11.699 55.153 1.00 0.00 C ATOM 239 C LEU 61 27.907 13.061 54.545 1.00 0.00 C ATOM 240 O LEU 61 28.485 13.331 53.493 1.00 0.00 O ATOM 241 N LYS 62 27.219 13.940 55.230 1.00 0.00 N ATOM 242 CA LYS 62 27.183 15.295 54.717 1.00 0.00 C ATOM 243 C LYS 62 26.088 15.547 53.716 1.00 0.00 C ATOM 244 O LYS 62 25.070 14.876 53.699 1.00 0.00 O ATOM 245 N ASN 63 26.294 16.592 52.912 1.00 0.00 N ATOM 246 CA ASN 63 25.337 17.046 51.917 1.00 0.00 C ATOM 247 C ASN 63 25.417 16.325 50.580 1.00 0.00 C ATOM 248 O ASN 63 24.503 16.426 49.765 1.00 0.00 O ATOM 249 N PHE 64 26.510 15.600 50.370 1.00 0.00 N ATOM 250 CA PHE 64 26.708 14.830 49.154 1.00 0.00 C ATOM 251 C PHE 64 25.662 13.726 49.161 1.00 0.00 C ATOM 252 O PHE 64 24.936 13.521 48.193 1.00 0.00 O ATOM 253 N LEU 65 25.575 13.066 50.315 1.00 0.00 N ATOM 254 CA LEU 65 24.640 11.992 50.575 1.00 0.00 C ATOM 255 C LEU 65 23.225 12.482 50.433 1.00 0.00 C ATOM 256 O LEU 65 22.367 11.830 49.846 1.00 0.00 O ATOM 257 N ASP 66 22.995 13.666 50.975 1.00 0.00 N ATOM 258 CA ASP 66 21.699 14.275 50.867 1.00 0.00 C ATOM 259 C ASP 66 21.359 14.481 49.399 1.00 0.00 C ATOM 260 O ASP 66 20.369 13.961 48.845 1.00 0.00 O ATOM 261 N TYR 67 22.223 15.221 48.751 1.00 0.00 N ATOM 262 CA TYR 67 22.081 15.569 47.379 1.00 0.00 C ATOM 263 C TYR 67 22.064 14.386 46.443 1.00 0.00 C ATOM 264 O TYR 67 21.464 14.473 45.382 1.00 0.00 O ATOM 265 N MET 68 22.762 13.314 46.821 1.00 0.00 N ATOM 266 CA MET 68 22.831 12.107 46.015 1.00 0.00 C ATOM 267 C MET 68 21.483 11.409 46.019 1.00 0.00 C ATOM 268 O MET 68 20.921 11.035 44.983 1.00 0.00 O ATOM 269 N GLU 69 20.952 11.275 47.229 1.00 0.00 N ATOM 270 CA GLU 69 19.659 10.685 47.466 1.00 0.00 C ATOM 271 C GLU 69 18.603 11.492 46.727 1.00 0.00 C ATOM 272 O GLU 69 17.717 10.951 46.079 1.00 0.00 O ATOM 273 N VAL 70 18.735 12.807 46.806 1.00 0.00 N ATOM 274 CA VAL 70 17.823 13.699 46.111 1.00 0.00 C ATOM 275 C VAL 70 17.789 13.417 44.626 1.00 0.00 C ATOM 276 O VAL 70 16.731 13.232 44.031 1.00 0.00 O ATOM 277 N CYS 71 18.962 13.423 44.007 1.00 0.00 N ATOM 278 CA CYS 71 19.070 13.192 42.596 1.00 0.00 C ATOM 279 C CYS 71 18.345 11.948 42.187 1.00 0.00 C ATOM 280 O CYS 71 17.565 11.932 41.241 1.00 0.00 O ATOM 281 N GLN 72 18.622 10.895 42.918 1.00 0.00 N ATOM 282 CA GLN 72 17.961 9.671 42.618 1.00 0.00 C ATOM 283 C GLN 72 16.445 9.841 42.639 1.00 0.00 C ATOM 284 O GLN 72 15.763 9.463 41.697 1.00 0.00 O ATOM 285 N LEU 73 15.916 10.380 43.741 1.00 0.00 N ATOM 286 CA LEU 73 14.481 10.570 43.890 1.00 0.00 C ATOM 287 C LEU 73 13.906 11.272 42.682 1.00 0.00 C ATOM 288 O LEU 73 12.908 10.867 42.115 1.00 0.00 O ATOM 289 N ALA 74 14.585 12.329 42.285 1.00 0.00 N ATOM 290 CA ALA 74 14.180 13.106 41.141 1.00 0.00 C ATOM 291 C ALA 74 14.167 12.328 39.842 1.00 0.00 C ATOM 292 O ALA 74 13.210 12.447 39.078 1.00 0.00 O ATOM 293 N LEU 75 15.243 11.551 39.582 1.00 0.00 N ATOM 294 CA LEU 75 15.298 10.768 38.373 1.00 0.00 C ATOM 295 C LEU 75 14.052 9.930 38.300 1.00 0.00 C ATOM 296 O LEU 75 13.411 9.829 37.276 1.00 0.00 O ATOM 297 N ASN 76 13.689 9.366 39.457 1.00 0.00 N ATOM 298 CA ASN 76 12.509 8.539 39.578 1.00 0.00 C ATOM 299 C ASN 76 11.220 9.290 39.284 1.00 0.00 C ATOM 300 O ASN 76 10.259 8.745 38.749 1.00 0.00 O ATOM 301 N ASP 77 11.186 10.552 39.645 1.00 0.00 N ATOM 302 CA ASP 77 9.990 11.320 39.423 1.00 0.00 C ATOM 303 C ASP 77 9.763 11.693 37.973 1.00 0.00 C ATOM 304 O ASP 77 8.633 11.860 37.520 1.00 0.00 O ATOM 305 N ASN 79 10.833 11.818 37.231 1.00 0.00 N ATOM 306 CA ASN 79 10.632 12.176 35.858 1.00 0.00 C ATOM 307 C ASN 79 10.261 11.009 34.971 1.00 0.00 C ATOM 308 O ASN 79 9.931 11.217 33.812 1.00 0.00 O ATOM 309 N PHE 80 10.267 9.783 35.513 1.00 0.00 N ATOM 310 CA PHE 80 9.897 8.620 34.703 1.00 0.00 C ATOM 311 C PHE 80 8.606 7.873 35.093 1.00 0.00 C ATOM 312 O PHE 80 7.892 7.380 34.218 1.00 0.00 O ATOM 313 N LYS 81 8.333 7.780 36.394 1.00 0.00 N ATOM 314 CA LYS 81 7.173 7.076 36.931 1.00 0.00 C ATOM 315 C LYS 81 5.956 7.022 36.023 1.00 0.00 C ATOM 316 O LYS 81 5.401 5.961 35.718 1.00 0.00 O ATOM 317 N ILE 82 5.546 8.199 35.593 1.00 0.00 N ATOM 318 CA ILE 82 4.389 8.322 34.745 1.00 0.00 C ATOM 319 C ILE 82 4.754 8.608 33.322 1.00 0.00 C ATOM 320 O ILE 82 4.585 9.717 32.844 1.00 0.00 O ATOM 321 N ALA 83 5.242 7.599 32.628 1.00 0.00 N ATOM 322 CA ALA 83 5.627 7.829 31.269 1.00 0.00 C ATOM 323 C ALA 83 4.986 6.881 30.274 1.00 0.00 C ATOM 324 O ALA 83 5.022 7.125 29.064 1.00 0.00 O ATOM 325 N SER 84 4.387 5.815 30.775 1.00 0.00 N ATOM 326 CA SER 84 3.756 4.880 29.879 1.00 0.00 C ATOM 327 C SER 84 2.292 4.780 30.227 1.00 0.00 C ATOM 328 O SER 84 1.649 3.749 30.084 1.00 0.00 O ATOM 329 N ASN 85 1.780 5.893 30.744 1.00 0.00 N ATOM 330 CA ASN 85 0.408 5.998 31.180 1.00 0.00 C ATOM 331 C ASN 85 -0.605 6.437 30.119 1.00 0.00 C ATOM 332 O ASN 85 -1.684 5.869 30.060 1.00 0.00 O ATOM 333 N SER 86 -0.260 7.457 29.342 1.00 0.00 N ATOM 334 CA SER 86 -1.192 7.935 28.339 1.00 0.00 C ATOM 335 C SER 86 -1.929 6.840 27.612 1.00 0.00 C ATOM 336 O SER 86 -1.379 5.783 27.414 1.00 0.00 O ATOM 337 N LEU 87 -3.186 7.087 27.296 1.00 0.00 N ATOM 338 CA LEU 87 -4.074 6.133 26.629 1.00 0.00 C ATOM 339 C LEU 87 -4.067 6.228 25.119 1.00 0.00 C ATOM 340 O LEU 87 -4.736 5.446 24.455 1.00 0.00 O ATOM 341 N MET 89 -3.308 7.171 24.575 1.00 0.00 N ATOM 342 CA MET 89 -3.227 7.324 23.138 1.00 0.00 C ATOM 343 C MET 89 -1.811 7.585 22.662 1.00 0.00 C ATOM 344 O MET 89 -0.977 8.128 23.379 1.00 0.00 O ATOM 345 N ALA 90 -1.549 7.189 21.435 1.00 0.00 N ATOM 346 CA ALA 90 -0.272 7.391 20.827 1.00 0.00 C ATOM 347 C ALA 90 0.296 8.790 21.080 1.00 0.00 C ATOM 348 O ALA 90 1.427 8.953 21.531 1.00 0.00 O ATOM 349 N MET 91 -0.492 9.808 20.786 1.00 0.00 N ATOM 350 CA MET 91 -0.033 11.171 20.944 1.00 0.00 C ATOM 351 C MET 91 0.590 11.492 22.285 1.00 0.00 C ATOM 352 O MET 91 1.732 11.915 22.359 1.00 0.00 O ATOM 353 N ILE 92 -0.208 11.327 23.342 1.00 0.00 N ATOM 354 CA ILE 92 0.225 11.632 24.675 1.00 0.00 C ATOM 355 C ILE 92 1.383 10.777 25.095 1.00 0.00 C ATOM 356 O ILE 92 2.280 11.236 25.793 1.00 0.00 O ATOM 357 N TYR 93 1.352 9.535 24.622 1.00 0.00 N ATOM 358 CA TYR 93 2.381 8.553 24.874 1.00 0.00 C ATOM 359 C TYR 93 3.726 9.011 24.371 1.00 0.00 C ATOM 360 O TYR 93 4.769 8.822 25.003 1.00 0.00 O ATOM 361 N ALA 94 3.668 9.590 23.195 1.00 0.00 N ATOM 362 CA ALA 94 4.835 10.067 22.529 1.00 0.00 C ATOM 363 C ALA 94 5.385 11.281 23.226 1.00 0.00 C ATOM 364 O ALA 94 6.599 11.406 23.414 1.00 0.00 O ATOM 365 N GLY 95 4.478 12.176 23.592 1.00 0.00 N ATOM 366 CA GLY 95 4.855 13.389 24.273 1.00 0.00 C ATOM 367 C GLY 95 5.497 13.064 25.600 1.00 0.00 C ATOM 368 O GLY 95 6.568 13.552 25.932 1.00 0.00 O ATOM 369 N ASN 96 4.819 12.182 26.329 1.00 0.00 N ATOM 370 CA ASN 96 5.265 11.699 27.619 1.00 0.00 C ATOM 371 C ASN 96 6.678 11.107 27.626 1.00 0.00 C ATOM 372 O ASN 96 7.517 11.432 28.461 1.00 0.00 O ATOM 373 N LEU 97 6.922 10.221 26.669 1.00 0.00 N ATOM 374 CA LEU 97 8.228 9.626 26.579 1.00 0.00 C ATOM 375 C LEU 97 9.275 10.666 26.295 1.00 0.00 C ATOM 376 O LEU 97 10.279 10.749 26.994 1.00 0.00 O ATOM 377 N SER 98 9.030 11.438 25.245 1.00 0.00 N ATOM 378 CA SER 98 9.944 12.492 24.807 1.00 0.00 C ATOM 379 C SER 98 10.367 13.454 25.886 1.00 0.00 C ATOM 380 O SER 98 11.475 13.993 25.874 1.00 0.00 O ATOM 381 N LEU 99 9.454 13.676 26.803 1.00 0.00 N ATOM 382 CA LEU 99 9.721 14.572 27.885 1.00 0.00 C ATOM 383 C LEU 99 10.531 13.843 28.923 1.00 0.00 C ATOM 384 O LEU 99 11.565 14.327 29.380 1.00 0.00 O ATOM 385 N ILE 100 10.043 12.654 29.270 1.00 0.00 N ATOM 386 CA ILE 100 10.726 11.846 30.235 1.00 0.00 C ATOM 387 C ILE 100 12.197 11.748 29.863 1.00 0.00 C ATOM 388 O ILE 100 13.064 11.984 30.685 1.00 0.00 O ATOM 389 N PHE 101 12.470 11.464 28.591 1.00 0.00 N ATOM 390 CA PHE 101 13.826 11.346 28.114 1.00 0.00 C ATOM 391 C PHE 101 14.610 12.615 28.317 1.00 0.00 C ATOM 392 O PHE 101 15.756 12.638 28.783 1.00 0.00 O ATOM 393 N ASP 102 13.964 13.677 27.956 1.00 0.00 N ATOM 394 CA ASP 102 14.566 14.964 28.071 1.00 0.00 C ATOM 395 C ASP 102 14.867 15.335 29.512 1.00 0.00 C ATOM 396 O ASP 102 15.905 15.877 29.800 1.00 0.00 O ATOM 397 N SER 103 13.969 15.013 30.434 1.00 0.00 N ATOM 398 CA SER 103 14.213 15.325 31.831 1.00 0.00 C ATOM 399 C SER 103 15.367 14.505 32.447 1.00 0.00 C ATOM 400 O SER 103 16.084 14.984 33.324 1.00 0.00 O ATOM 401 N ILE 104 15.547 13.259 32.000 1.00 0.00 N ATOM 402 CA ILE 104 16.609 12.414 32.533 1.00 0.00 C ATOM 403 C ILE 104 17.967 12.974 32.154 1.00 0.00 C ATOM 404 O ILE 104 18.919 12.954 32.930 1.00 0.00 O ATOM 405 N LYS 105 18.036 13.508 30.941 1.00 0.00 N ATOM 406 CA LYS 105 19.258 14.103 30.451 1.00 0.00 C ATOM 407 C LYS 105 19.645 15.372 31.200 1.00 0.00 C ATOM 408 O LYS 105 20.818 15.584 31.527 1.00 0.00 O ATOM 409 N THR 106 18.641 16.219 31.460 1.00 0.00 N ATOM 410 CA THR 106 18.855 17.483 32.147 1.00 0.00 C ATOM 411 C THR 106 19.305 17.297 33.565 1.00 0.00 C ATOM 412 O THR 106 20.186 18.002 34.032 1.00 0.00 O ATOM 413 N ASP 107 18.702 16.316 34.220 1.00 0.00 N ATOM 414 CA ASP 107 19.028 15.967 35.576 1.00 0.00 C ATOM 415 C ASP 107 20.447 15.406 35.696 1.00 0.00 C ATOM 416 O ASP 107 21.111 15.573 36.719 1.00 0.00 O ATOM 417 N ILE 108 20.902 14.739 34.631 1.00 0.00 N ATOM 418 CA ILE 108 22.234 14.200 34.571 1.00 0.00 C ATOM 419 C ILE 108 23.229 15.325 34.405 1.00 0.00 C ATOM 420 O ILE 108 24.276 15.329 35.039 1.00 0.00 O ATOM 421 N SER 109 22.874 16.294 33.573 1.00 0.00 N ATOM 422 CA SER 109 23.740 17.429 33.375 1.00 0.00 C ATOM 423 C SER 109 23.906 18.202 34.676 1.00 0.00 C ATOM 424 O SER 109 25.014 18.525 35.073 1.00 0.00 O ATOM 425 N THR 110 22.790 18.477 35.357 1.00 0.00 N ATOM 426 CA THR 110 22.783 19.182 36.645 1.00 0.00 C ATOM 427 C THR 110 23.789 18.583 37.623 1.00 0.00 C ATOM 428 O THR 110 24.699 19.250 38.095 1.00 0.00 O ATOM 429 N LEU 111 23.579 17.307 37.982 1.00 0.00 N ATOM 430 CA LEU 111 24.473 16.619 38.880 1.00 0.00 C ATOM 431 C LEU 111 25.917 16.597 38.406 1.00 0.00 C ATOM 432 O LEU 111 26.838 16.621 39.208 1.00 0.00 O ATOM 433 N LEU 112 26.149 16.527 37.090 1.00 0.00 N ATOM 434 CA LEU 112 27.510 16.491 36.572 1.00 0.00 C ATOM 435 C LEU 112 28.245 17.786 36.879 1.00 0.00 C ATOM 436 O LEU 112 29.370 17.804 37.372 1.00 0.00 O ATOM 437 N SER 113 27.575 18.878 36.553 1.00 0.00 N ATOM 438 CA SER 113 28.022 20.230 36.784 1.00 0.00 C ATOM 439 C SER 113 28.294 20.454 38.278 1.00 0.00 C ATOM 440 O SER 113 29.301 21.023 38.682 1.00 0.00 O ATOM 441 N ALA 114 27.400 19.967 39.124 1.00 0.00 N ATOM 442 CA ALA 114 27.608 20.115 40.538 1.00 0.00 C ATOM 443 C ALA 114 28.952 19.561 40.992 1.00 0.00 C ATOM 444 O ALA 114 29.746 20.217 41.661 1.00 0.00 O ATOM 445 N GLU 115 29.159 18.300 40.655 1.00 0.00 N ATOM 446 CA GLU 115 30.369 17.595 41.015 1.00 0.00 C ATOM 447 C GLU 115 31.590 18.358 40.523 1.00 0.00 C ATOM 448 O GLU 115 32.649 18.332 41.141 1.00 0.00 O ATOM 449 N TYR 116 31.436 19.005 39.388 1.00 0.00 N ATOM 450 CA TYR 116 32.526 19.720 38.752 1.00 0.00 C ATOM 451 C TYR 116 32.875 21.010 39.469 1.00 0.00 C ATOM 452 O TYR 116 34.036 21.377 39.587 1.00 0.00 O ATOM 453 N LYS 117 31.844 21.654 39.981 1.00 0.00 N ATOM 454 CA LYS 117 31.956 22.899 40.699 1.00 0.00 C ATOM 455 C LYS 117 32.464 22.785 42.126 1.00 0.00 C ATOM 456 O LYS 117 32.730 23.805 42.771 1.00 0.00 O ATOM 457 N LYS 118 32.591 21.545 42.620 1.00 0.00 N ATOM 458 CA LYS 118 33.085 21.268 43.969 1.00 0.00 C ATOM 459 C LYS 118 34.617 21.206 43.978 1.00 0.00 C ATOM 460 O LYS 118 35.211 20.189 43.629 1.00 0.00 O ATOM 461 N ASN 119 35.252 22.320 44.359 1.00 0.00 N ATOM 462 CA ASN 119 36.714 22.461 44.382 1.00 0.00 C ATOM 463 C ASN 119 37.401 21.650 45.478 1.00 0.00 C ATOM 464 O ASN 119 38.593 21.307 45.401 1.00 0.00 O ATOM 465 N SER 120 36.608 21.375 46.500 1.00 0.00 N ATOM 466 CA SER 120 36.985 20.608 47.656 1.00 0.00 C ATOM 467 C SER 120 36.932 19.125 47.284 1.00 0.00 C ATOM 468 O SER 120 37.281 18.250 48.078 1.00 0.00 O ATOM 469 N PHE 121 36.478 18.863 46.041 1.00 0.00 N ATOM 470 CA PHE 121 36.327 17.524 45.449 1.00 0.00 C ATOM 471 C PHE 121 35.391 16.619 46.259 1.00 0.00 C ATOM 472 O PHE 121 35.564 15.418 46.415 1.00 0.00 O ATOM 473 N SER 122 34.362 17.273 46.791 1.00 0.00 N ATOM 474 CA SER 122 33.395 16.627 47.643 1.00 0.00 C ATOM 475 C SER 122 32.697 15.409 47.067 1.00 0.00 C ATOM 476 O SER 122 32.265 14.518 47.809 1.00 0.00 O ATOM 477 N TRP 123 32.530 15.411 45.764 1.00 0.00 N ATOM 478 CA TRP 123 31.825 14.340 45.107 1.00 0.00 C ATOM 479 C TRP 123 32.692 13.164 44.766 1.00 0.00 C ATOM 480 O TRP 123 32.213 12.128 44.326 1.00 0.00 O ATOM 481 N PRO 124 33.978 13.353 44.899 1.00 0.00 N ATOM 482 CA PRO 124 34.911 12.301 44.572 1.00 0.00 C ATOM 483 C PRO 124 34.544 10.934 45.128 1.00 0.00 C ATOM 484 O PRO 124 34.725 9.887 44.507 1.00 0.00 O ATOM 485 N SER 125 34.107 10.935 46.337 1.00 0.00 N ATOM 486 CA SER 125 33.838 9.679 46.980 1.00 0.00 C ATOM 487 C SER 125 32.738 8.805 46.387 1.00 0.00 C ATOM 488 O SER 125 32.672 7.609 46.709 1.00 0.00 O ATOM 489 N LEU 126 31.891 9.387 45.543 1.00 0.00 N ATOM 490 CA LEU 126 30.788 8.626 44.972 1.00 0.00 C ATOM 491 C LEU 126 30.832 8.596 43.468 1.00 0.00 C ATOM 492 O LEU 126 29.866 8.185 42.826 1.00 0.00 O END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 488 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 64.95 68.5 238 96.7 246 ARMSMC SECONDARY STRUCTURE . . 41.35 85.7 140 97.2 144 ARMSMC SURFACE . . . . . . . . 62.83 68.0 172 95.6 180 ARMSMC BURIED . . . . . . . . 70.20 69.7 66 100.0 66 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 113 ARMSSC1 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 109 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 66 ARMSSC1 SURFACE . . . . . . . . 0.00 0.0 0 0.0 86 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 27 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 91 ARMSSC2 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 64 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 55 ARMSSC2 SURFACE . . . . . . . . 0.00 0.0 0 0.0 71 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 20 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 27 ARMSSC3 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 25 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 13 ARMSSC3 SURFACE . . . . . . . . 0.00 0.0 0 0.0 24 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 3 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 12 ARMSSC4 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 12 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 6 ARMSSC4 SURFACE . . . . . . . . 0.00 0.0 0 0.0 10 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 20.01 (Number of atoms: 122) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 20.01 122 98.4 124 CRMSCA CRN = ALL/NP . . . . . 0.1640 CRMSCA SECONDARY STRUCTURE . . 19.08 71 98.6 72 CRMSCA SURFACE . . . . . . . . 20.48 89 97.8 91 CRMSCA BURIED . . . . . . . . 18.68 33 100.0 33 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 19.99 488 79.2 616 CRMSMC SECONDARY STRUCTURE . . 19.07 284 79.3 358 CRMSMC SURFACE . . . . . . . . 20.39 356 78.6 453 CRMSMC BURIED . . . . . . . . 18.89 132 81.0 163 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 0.00 0 0.0 506 CRMSSC RELIABLE SIDE CHAINS . 0.00 0 0.0 438 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 293 CRMSSC SURFACE . . . . . . . . 0.00 0 0.0 376 CRMSSC BURIED . . . . . . . . 0.00 0 0.0 130 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 19.99 488 48.7 1002 CRMSALL SECONDARY STRUCTURE . . 19.07 284 48.9 581 CRMSALL SURFACE . . . . . . . . 20.39 356 48.1 740 CRMSALL BURIED . . . . . . . . 18.89 132 50.4 262 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 18.755 1.000 0.500 122 98.4 124 ERRCA SECONDARY STRUCTURE . . 18.035 1.000 0.500 71 98.6 72 ERRCA SURFACE . . . . . . . . 19.303 1.000 0.500 89 97.8 91 ERRCA BURIED . . . . . . . . 17.276 1.000 0.500 33 100.0 33 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 18.747 1.000 0.500 488 79.2 616 ERRMC SECONDARY STRUCTURE . . 18.044 1.000 0.500 284 79.3 358 ERRMC SURFACE . . . . . . . . 19.214 1.000 0.500 356 78.6 453 ERRMC BURIED . . . . . . . . 17.487 1.000 0.500 132 81.0 163 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 0.000 0.000 0.000 0 0.0 506 ERRSC RELIABLE SIDE CHAINS . 0.000 0.000 0.000 0 0.0 438 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 293 ERRSC SURFACE . . . . . . . . 0.000 0.000 0.000 0 0.0 376 ERRSC BURIED . . . . . . . . 0.000 0.000 0.000 0 0.0 130 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 18.747 1.000 0.500 488 48.7 1002 ERRALL SECONDARY STRUCTURE . . 18.044 1.000 0.500 284 48.9 581 ERRALL SURFACE . . . . . . . . 19.214 1.000 0.500 356 48.1 740 ERRALL BURIED . . . . . . . . 17.487 1.000 0.500 132 50.4 262 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 0 1 15 122 124 DISTCA CA (P) 0.00 0.00 0.00 0.81 12.10 124 DISTCA CA (RMS) 0.00 0.00 0.00 3.90 8.04 DISTCA ALL (N) 0 0 0 3 61 488 1002 DISTALL ALL (P) 0.00 0.00 0.00 0.30 6.09 1002 DISTALL ALL (RMS) 0.00 0.00 0.00 4.19 8.30 DISTALL END of the results output