####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 114 ( 456), selected 114 , name T0632AL285_1-D1 # Molecule2: number of CA atoms 114 ( 861), selected 114 , name T0632-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0632AL285_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 114 44 - 164 1.28 1.28 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 114 44 - 164 1.28 1.28 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 92 73 - 164 0.99 1.29 LCS_AVERAGE: 71.46 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 114 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT Y 44 Y 44 4 114 114 3 3 17 47 65 109 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT A 45 A 45 4 114 114 3 3 26 54 89 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT T 46 T 46 4 114 114 3 3 4 7 89 110 112 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT Y 47 Y 47 33 114 114 7 26 65 100 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT L 48 L 48 33 114 114 17 63 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT A 49 A 49 33 114 114 10 51 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT S 50 S 50 33 114 114 7 43 90 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT L 51 L 51 33 114 114 10 48 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT T 52 T 52 33 114 114 10 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT Q 53 Q 53 33 114 114 10 52 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT I 54 I 54 33 114 114 5 64 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT E 55 E 55 33 114 114 5 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT S 56 S 56 33 114 114 31 73 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT Q 57 Q 57 33 114 114 3 3 9 57 71 106 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT E 65 E 65 56 114 114 31 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT V 66 V 66 56 114 114 14 64 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT R 67 R 67 56 114 114 31 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT L 68 L 68 56 114 114 25 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT P 69 P 69 56 114 114 9 23 99 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT I 70 I 70 56 114 114 6 23 95 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT G 71 G 71 56 114 114 10 63 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT P 72 P 72 56 114 114 8 37 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT L 73 L 73 92 114 114 8 26 75 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT V 74 V 74 92 114 114 8 63 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT N 75 N 75 92 114 114 17 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT N 76 N 76 92 114 114 17 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT P 77 P 77 92 114 114 8 73 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT L 78 L 78 92 114 114 10 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT N 79 N 79 92 114 114 17 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT M 80 M 80 92 114 114 31 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT V 81 V 81 92 114 114 31 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT H 82 H 82 92 114 114 31 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT G 83 G 83 92 114 114 31 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT G 84 G 84 92 114 114 31 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT I 85 I 85 92 114 114 31 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT T 86 T 86 92 114 114 31 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT A 87 A 87 92 114 114 14 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT T 88 T 88 92 114 114 26 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT L 89 L 89 92 114 114 31 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT L 90 L 90 92 114 114 14 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT D 91 D 91 92 114 114 19 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT T 92 T 92 92 114 114 16 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT A 93 A 93 92 114 114 19 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT M 94 M 94 92 114 114 20 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT G 95 G 95 92 114 114 20 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT Q 96 Q 96 92 114 114 20 69 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT M 97 M 97 92 114 114 20 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT V 98 V 98 92 114 114 20 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT N 99 N 99 92 114 114 20 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT R 100 R 100 92 114 114 16 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT Q 101 Q 101 92 114 114 9 70 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT L 102 L 102 92 114 114 16 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT P 103 P 103 92 114 114 20 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT D 104 D 104 92 114 114 3 4 47 97 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT G 105 G 105 92 114 114 3 10 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT Q 106 Q 106 92 114 114 16 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT S 107 S 107 92 114 114 20 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT A 108 A 108 92 114 114 20 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT V 109 V 109 92 114 114 20 69 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT T 110 T 110 92 114 114 20 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT S 111 S 111 92 114 114 19 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT E 112 E 112 92 114 114 16 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT L 113 L 113 92 114 114 27 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT N 114 N 114 92 114 114 20 73 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT I 115 I 115 92 114 114 28 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT H 116 H 116 92 114 114 27 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT Y 117 Y 117 92 114 114 26 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT V 118 V 118 92 114 114 31 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT K 119 K 119 92 114 114 31 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT P 120 P 120 92 114 114 31 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT G 121 G 121 92 114 114 4 13 40 93 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT M 122 M 122 92 114 114 3 12 21 75 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT G 123 G 123 92 114 114 3 14 57 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT T 124 T 124 92 114 114 31 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT Y 125 Y 125 92 114 114 31 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT L 126 L 126 92 114 114 14 69 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT R 127 R 127 92 114 114 31 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT A 128 A 128 92 114 114 31 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT V 129 V 129 92 114 114 31 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT A 130 A 130 92 114 114 31 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT S 131 S 131 92 114 114 31 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT I 132 I 132 92 114 114 26 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT V 133 V 133 92 114 114 9 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT H 134 H 134 92 114 114 16 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT Q 135 Q 135 92 114 114 20 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT G 136 G 136 92 114 114 6 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT K 137 K 137 92 114 114 15 65 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT Q 138 Q 138 92 114 114 31 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT R 139 R 139 92 114 114 31 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT I 140 I 140 92 114 114 27 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT V 141 V 141 92 114 114 10 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT V 142 V 142 92 114 114 9 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT E 143 E 143 92 114 114 16 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT G 144 G 144 92 114 114 20 59 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT K 145 K 145 92 114 114 31 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT V 146 V 146 92 114 114 31 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT Y 147 Y 147 92 114 114 31 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT T 148 T 148 92 114 114 31 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT D 149 D 149 92 114 114 31 72 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT Q 150 Q 150 92 114 114 31 72 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT G 151 G 151 92 114 114 31 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT E 152 E 152 92 114 114 31 73 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT T 153 T 153 92 114 114 31 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT V 154 V 154 92 114 114 31 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT A 155 A 155 92 114 114 26 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT M 156 M 156 92 114 114 27 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT G 157 G 157 92 114 114 20 59 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT T 158 T 158 92 114 114 20 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT G 159 G 159 92 114 114 16 66 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT S 160 S 160 92 114 114 27 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT F 161 F 161 92 114 114 22 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT F 162 F 162 92 114 114 17 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT V 163 V 163 92 114 114 17 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_GDT L 164 L 164 92 114 114 20 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 LCS_AVERAGE LCS_A: 90.49 ( 71.46 100.00 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 31 74 100 105 109 110 113 114 114 114 114 114 114 114 114 114 114 114 114 114 GDT PERCENT_AT 27.19 64.91 87.72 92.11 95.61 96.49 99.12 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.35 0.75 0.90 0.96 1.06 1.08 1.24 1.28 1.28 1.28 1.28 1.28 1.28 1.28 1.28 1.28 1.28 1.28 1.28 1.28 GDT RMS_ALL_AT 1.41 1.29 1.28 1.28 1.28 1.28 1.28 1.28 1.28 1.28 1.28 1.28 1.28 1.28 1.28 1.28 1.28 1.28 1.28 1.28 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA Y 44 Y 44 3.529 8 0.670 0.670 4.774 42.262 14.087 LGA A 45 A 45 3.856 1 0.623 0.623 3.856 53.810 43.048 LGA T 46 T 46 3.519 3 0.631 0.631 3.537 52.381 29.932 LGA Y 47 Y 47 2.623 8 0.599 0.599 2.623 64.881 21.627 LGA L 48 L 48 1.210 4 0.094 0.094 1.797 79.286 39.643 LGA A 49 A 49 1.540 1 0.016 0.016 1.614 75.000 60.000 LGA S 50 S 50 1.761 2 0.048 0.048 1.761 72.857 48.571 LGA L 51 L 51 1.521 4 0.142 0.142 1.521 79.286 39.643 LGA T 52 T 52 1.058 3 0.083 0.083 1.281 81.429 46.531 LGA Q 53 Q 53 1.211 5 0.065 0.065 1.845 79.286 35.238 LGA I 54 I 54 1.087 4 0.082 0.082 1.280 81.429 40.714 LGA E 55 E 55 0.752 5 0.022 0.022 0.775 90.476 40.212 LGA S 56 S 56 0.868 2 0.065 0.065 2.482 80.000 53.333 LGA Q 57 Q 57 4.023 5 0.650 0.650 4.792 42.262 18.783 LGA E 65 E 65 0.683 5 0.072 0.072 1.247 88.214 39.206 LGA V 66 V 66 1.257 3 0.138 0.138 1.257 85.952 49.116 LGA R 67 R 67 0.397 7 0.051 0.051 0.643 95.238 34.632 LGA L 68 L 68 0.593 4 0.066 0.066 0.922 92.857 46.429 LGA P 69 P 69 1.737 3 0.057 0.057 2.134 72.976 41.701 LGA I 70 I 70 1.955 4 0.108 0.108 2.105 70.833 35.417 LGA G 71 G 71 1.216 0 0.070 0.070 1.405 81.429 81.429 LGA P 72 P 72 1.639 3 0.023 0.023 1.690 75.000 42.857 LGA L 73 L 73 1.960 4 0.029 0.029 1.991 72.857 36.429 LGA V 74 V 74 1.294 3 0.061 0.061 1.438 81.429 46.531 LGA N 75 N 75 0.691 4 0.092 0.092 0.936 90.476 45.238 LGA N 76 N 76 0.739 4 0.053 0.053 0.903 90.476 45.238 LGA P 77 P 77 1.091 3 0.126 0.126 1.197 83.690 47.823 LGA L 78 L 78 1.024 4 0.133 0.133 1.352 85.952 42.976 LGA N 79 N 79 0.539 4 0.200 0.200 0.686 92.857 46.429 LGA M 80 M 80 0.350 4 0.063 0.063 0.461 100.000 50.000 LGA V 81 V 81 0.695 3 0.028 0.028 0.905 90.476 51.701 LGA H 82 H 82 0.753 6 0.013 0.013 0.778 90.476 36.190 LGA G 83 G 83 0.730 0 0.062 0.062 0.783 90.476 90.476 LGA G 84 G 84 0.776 0 0.103 0.103 0.776 92.857 92.857 LGA I 85 I 85 0.574 4 0.032 0.032 0.648 95.238 47.619 LGA T 86 T 86 0.669 3 0.037 0.037 0.669 90.476 51.701 LGA A 87 A 87 0.790 1 0.083 0.083 1.073 88.214 70.571 LGA T 88 T 88 0.928 3 0.097 0.097 0.928 90.476 51.701 LGA L 89 L 89 0.559 4 0.029 0.029 0.687 90.476 45.238 LGA L 90 L 90 0.809 4 0.045 0.045 0.887 90.476 45.238 LGA D 91 D 91 0.931 4 0.058 0.058 1.214 88.214 44.107 LGA T 92 T 92 0.970 3 0.060 0.060 1.402 85.952 49.116 LGA A 93 A 93 1.222 1 0.016 0.016 1.288 81.429 65.143 LGA M 94 M 94 1.100 4 0.046 0.046 1.156 81.429 40.714 LGA G 95 G 95 1.199 0 0.070 0.070 1.633 79.286 79.286 LGA Q 96 Q 96 1.388 5 0.020 0.020 1.388 81.429 36.190 LGA M 97 M 97 1.256 4 0.106 0.106 1.256 81.429 40.714 LGA V 98 V 98 1.027 3 0.022 0.022 1.205 81.429 46.531 LGA N 99 N 99 1.237 4 0.121 0.121 1.543 79.286 39.643 LGA R 100 R 100 1.266 7 0.055 0.055 1.266 81.429 29.610 LGA Q 101 Q 101 1.279 5 0.034 0.034 1.279 81.429 36.190 LGA L 102 L 102 1.160 4 0.098 0.098 1.240 85.952 42.976 LGA P 103 P 103 0.630 3 0.033 0.033 3.003 75.952 43.401 LGA D 104 D 104 2.676 4 0.437 0.437 2.676 75.476 37.738 LGA G 105 G 105 1.717 0 0.039 0.039 2.424 70.833 70.833 LGA Q 106 Q 106 0.883 5 0.054 0.054 1.153 88.214 39.206 LGA S 107 S 107 0.825 2 0.037 0.037 0.905 92.857 61.905 LGA A 108 A 108 0.450 1 0.014 0.014 1.228 90.595 72.476 LGA V 109 V 109 1.216 3 0.035 0.035 1.216 88.214 50.408 LGA T 110 T 110 0.927 3 0.097 0.097 1.063 88.214 50.408 LGA S 111 S 111 0.650 2 0.072 0.072 0.719 90.476 60.317 LGA E 112 E 112 0.997 5 0.061 0.061 0.997 92.857 41.270 LGA L 113 L 113 0.657 4 0.052 0.052 1.124 88.214 44.107 LGA N 114 N 114 1.135 4 0.076 0.076 1.135 88.214 44.107 LGA I 115 I 115 0.524 4 0.028 0.028 1.026 88.214 44.107 LGA H 116 H 116 0.645 6 0.059 0.059 0.646 92.857 37.143 LGA Y 117 Y 117 0.748 8 0.087 0.087 1.299 88.214 29.405 LGA V 118 V 118 0.232 3 0.180 0.180 0.854 97.619 55.782 LGA K 119 K 119 0.355 5 0.043 0.043 0.559 97.619 43.386 LGA P 120 P 120 0.534 3 0.153 0.153 1.048 88.333 50.476 LGA G 121 G 121 2.377 0 0.138 0.138 2.377 72.976 72.976 LGA M 122 M 122 2.440 4 0.685 0.685 5.727 50.238 25.119 LGA G 123 G 123 2.245 0 0.106 0.106 2.245 79.762 79.762 LGA T 124 T 124 0.409 3 0.633 0.633 1.689 86.190 49.252 LGA Y 125 Y 125 0.706 8 0.082 0.082 1.452 88.214 29.405 LGA L 126 L 126 1.159 4 0.026 0.026 1.159 90.595 45.298 LGA R 127 R 127 0.628 7 0.052 0.052 0.879 90.476 32.900 LGA A 128 A 128 0.745 1 0.024 0.024 0.993 90.476 72.381 LGA V 129 V 129 0.812 3 0.034 0.034 0.812 90.476 51.701 LGA A 130 A 130 0.626 1 0.076 0.076 0.729 92.857 74.286 LGA S 131 S 131 0.635 2 0.060 0.060 0.676 90.476 60.317 LGA I 132 I 132 0.798 4 0.021 0.021 1.064 88.214 44.107 LGA V 133 V 133 0.911 3 0.039 0.039 1.049 88.214 50.408 LGA H 134 H 134 0.801 6 0.067 0.067 0.801 90.476 36.190 LGA Q 135 Q 135 0.893 5 0.058 0.058 1.105 88.214 39.206 LGA G 136 G 136 0.891 0 0.031 0.031 0.891 90.476 90.476 LGA K 137 K 137 1.216 5 0.060 0.060 1.446 81.429 36.190 LGA Q 138 Q 138 0.808 5 0.210 0.210 0.808 92.857 41.270 LGA R 139 R 139 0.610 7 0.025 0.025 0.804 90.476 32.900 LGA I 140 I 140 0.536 4 0.115 0.115 0.878 92.857 46.429 LGA V 141 V 141 0.988 3 0.045 0.045 1.018 85.952 49.116 LGA V 142 V 142 1.040 3 0.089 0.089 1.386 81.429 46.531 LGA E 143 E 143 0.838 5 0.104 0.104 0.884 90.476 40.212 LGA G 144 G 144 1.255 0 0.172 0.172 1.569 79.286 79.286 LGA K 145 K 145 0.356 5 0.068 0.068 0.826 95.238 42.328 LGA V 146 V 146 0.483 3 0.033 0.033 0.483 100.000 57.143 LGA Y 147 Y 147 0.629 8 0.035 0.035 0.771 90.476 30.159 LGA T 148 T 148 0.639 3 0.073 0.073 0.930 90.476 51.701 LGA D 149 D 149 0.998 4 0.189 0.189 1.420 85.952 42.976 LGA Q 150 Q 150 0.971 5 0.238 0.238 1.556 86.071 38.254 LGA G 151 G 151 0.475 0 0.109 0.109 0.889 92.857 92.857 LGA E 152 E 152 0.820 5 0.034 0.034 0.820 92.857 41.270 LGA T 153 T 153 0.550 3 0.104 0.104 0.952 90.476 51.701 LGA V 154 V 154 0.747 3 0.061 0.061 0.747 95.238 54.422 LGA A 155 A 155 0.501 1 0.071 0.071 0.501 97.619 78.095 LGA M 156 M 156 0.381 4 0.097 0.097 0.560 97.619 48.810 LGA G 157 G 157 1.389 0 0.059 0.059 1.389 85.952 85.952 LGA T 158 T 158 1.038 3 0.079 0.079 1.154 83.690 47.823 LGA G 159 G 159 1.213 0 0.043 0.043 1.263 85.952 85.952 LGA S 160 S 160 0.690 2 0.049 0.049 0.825 95.238 63.492 LGA F 161 F 161 0.310 7 0.051 0.051 0.729 97.619 35.498 LGA F 162 F 162 0.925 7 0.030 0.030 0.925 90.476 32.900 LGA V 163 V 163 0.782 3 0.018 0.018 1.183 88.214 50.408 LGA L 164 L 164 0.846 6 0.050 0.050 0.846 67.857 30.159 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 114 455 455 100.00 854 455 53.28 114 SUMMARY(RMSD_GDC): 1.276 1.268 1.268 84.993 48.776 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 114 114 4.0 114 1.28 89.254 95.206 8.285 LGA_LOCAL RMSD: 1.276 Number of atoms: 114 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 1.276 Number of assigned atoms: 114 Std_ASGN_ATOMS RMSD: 1.276 Standard rmsd on all 114 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.454965 * X + -0.059187 * Y + 0.888540 * Z + 36.883930 Y_new = 0.241645 * X + 0.952145 * Y + 0.187155 * Z + 35.577320 Z_new = -0.857096 * X + 0.299860 * Y + -0.418891 * Z + 29.664190 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.653354 1.029607 2.520312 [DEG: 152.0260 58.9921 144.4033 ] ZXZ: 1.778394 2.003020 -1.234250 [DEG: 101.8945 114.7646 -70.7173 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0632AL285_1-D1 REMARK 2: T0632-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0632AL285_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 114 114 4.0 114 1.28 95.206 1.28 REMARK ---------------------------------------------------------- MOLECULE T0632AL285_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK Aligment from pdb entry: 1vh5A ATOM 21 N TYR 44 38.247 55.818 46.768 1.00 0.00 N ATOM 22 CA TYR 44 37.943 54.708 47.651 1.00 0.00 C ATOM 23 C TYR 44 37.827 55.068 49.119 1.00 0.00 C ATOM 24 O TYR 44 37.392 54.242 49.921 1.00 0.00 O ATOM 25 N ALA 45 38.226 56.289 49.500 1.00 0.00 N ATOM 26 CA ALA 45 38.268 56.666 50.926 1.00 0.00 C ATOM 27 C ALA 45 36.885 56.678 51.536 1.00 0.00 C ATOM 28 O ALA 45 35.983 57.357 51.029 1.00 0.00 O ATOM 29 N THR 46 36.721 55.920 52.617 1.00 0.00 N ATOM 30 CA THR 46 35.466 55.874 53.330 1.00 0.00 C ATOM 31 C THR 46 34.420 54.964 52.696 1.00 0.00 C ATOM 32 O THR 46 33.252 55.011 53.087 1.00 0.00 O ATOM 33 N TYR 47 34.836 54.138 51.733 1.00 0.00 N ATOM 34 CA TYR 47 33.918 53.155 51.115 1.00 0.00 C ATOM 35 C TYR 47 34.621 51.817 50.989 1.00 0.00 C ATOM 36 O TYR 47 35.727 51.644 51.479 1.00 0.00 O ATOM 37 N LEU 48 33.995 50.864 50.304 1.00 0.00 N ATOM 38 CA LEU 48 34.501 49.497 50.342 1.00 0.00 C ATOM 39 C LEU 48 35.916 49.378 49.760 1.00 0.00 C ATOM 40 O LEU 48 36.724 48.594 50.252 1.00 0.00 O ATOM 41 N ALA 49 36.186 50.115 48.690 1.00 0.00 N ATOM 42 CA ALA 49 37.496 50.043 48.059 1.00 0.00 C ATOM 43 C ALA 49 38.588 50.415 49.103 1.00 0.00 C ATOM 44 O ALA 49 39.587 49.716 49.234 1.00 0.00 O ATOM 45 N SER 50 38.349 51.492 49.846 1.00 0.00 N ATOM 46 CA SER 50 39.260 51.928 50.895 1.00 0.00 C ATOM 47 C SER 50 39.341 50.920 52.024 1.00 0.00 C ATOM 48 O SER 50 40.436 50.580 52.484 1.00 0.00 O ATOM 49 N LEU 51 38.188 50.434 52.456 1.00 0.00 N ATOM 50 CA LEU 51 38.109 49.444 53.543 1.00 0.00 C ATOM 51 C LEU 51 38.944 48.207 53.251 1.00 0.00 C ATOM 52 O LEU 51 39.594 47.679 54.143 1.00 0.00 O ATOM 53 N THR 52 38.909 47.733 52.002 1.00 0.00 N ATOM 54 CA THR 52 39.644 46.530 51.649 1.00 0.00 C ATOM 55 C THR 52 41.079 46.778 51.169 1.00 0.00 C ATOM 56 O THR 52 41.779 45.825 50.783 1.00 0.00 O ATOM 57 N GLN 53 41.495 48.051 51.138 1.00 0.00 N ATOM 58 CA GLN 53 42.836 48.422 50.647 1.00 0.00 C ATOM 59 C GLN 53 43.062 48.015 49.205 1.00 0.00 C ATOM 60 O GLN 53 44.144 47.577 48.846 1.00 0.00 O ATOM 61 N ILE 54 42.021 48.150 48.396 1.00 0.00 N ATOM 62 CA ILE 54 42.218 48.032 46.962 1.00 0.00 C ATOM 63 C ILE 54 42.980 49.280 46.475 1.00 0.00 C ATOM 64 O ILE 54 42.571 50.414 46.794 1.00 0.00 O ATOM 65 N GLU 55 44.058 49.062 45.713 1.00 0.00 N ATOM 66 CA GLU 55 44.928 50.147 45.271 1.00 0.00 C ATOM 67 C GLU 55 45.071 50.044 43.756 1.00 0.00 C ATOM 68 O GLU 55 45.582 49.047 43.236 1.00 0.00 O ATOM 69 N SER 56 44.683 51.102 43.049 1.00 0.00 N ATOM 70 CA SER 56 45.019 51.189 41.617 1.00 0.00 C ATOM 71 C SER 56 46.529 51.403 41.430 1.00 0.00 C ATOM 72 O SER 56 47.126 52.233 42.113 1.00 0.00 O ATOM 73 N GLN 57 47.121 50.631 40.538 1.00 0.00 N ATOM 74 CA GLN 57 48.573 50.581 40.357 1.00 0.00 C ATOM 75 C GLN 57 49.030 51.019 38.985 1.00 0.00 C ATOM 76 O GLN 57 50.204 51.389 38.811 1.00 0.00 O ATOM 105 N GLU 65 44.953 48.372 36.095 1.00 0.00 N ATOM 106 CA GLU 65 45.314 47.356 37.090 1.00 0.00 C ATOM 107 C GLU 65 45.183 47.900 38.501 1.00 0.00 C ATOM 108 O GLU 65 45.500 49.065 38.787 1.00 0.00 O ATOM 109 N VAL 66 44.701 47.025 39.393 1.00 0.00 N ATOM 110 CA VAL 66 44.658 47.332 40.813 1.00 0.00 C ATOM 111 C VAL 66 45.005 46.091 41.619 1.00 0.00 C ATOM 112 O VAL 66 44.764 44.960 41.170 1.00 0.00 O ATOM 113 N ARG 67 45.546 46.291 42.822 1.00 0.00 N ATOM 114 CA ARG 67 45.815 45.160 43.712 1.00 0.00 C ATOM 115 C ARG 67 44.969 45.209 44.981 1.00 0.00 C ATOM 116 O ARG 67 44.383 46.200 45.320 1.00 0.00 O ATOM 117 N LEU 68 44.931 44.074 45.676 1.00 0.00 N ATOM 118 CA LEU 68 44.143 43.895 46.899 1.00 0.00 C ATOM 119 C LEU 68 44.832 42.866 47.770 1.00 0.00 C ATOM 120 O LEU 68 45.299 41.847 47.271 1.00 0.00 O ATOM 121 N PRO 69 44.908 43.126 49.084 1.00 0.00 N ATOM 122 CA PRO 69 45.580 42.158 49.952 1.00 0.00 C ATOM 123 C PRO 69 44.696 40.938 50.170 1.00 0.00 C ATOM 124 O PRO 69 43.451 41.031 50.097 1.00 0.00 O ATOM 125 N ILE 70 45.353 39.812 50.407 1.00 0.00 N ATOM 126 CA ILE 70 44.722 38.594 50.901 1.00 0.00 C ATOM 127 C ILE 70 44.962 38.668 52.412 1.00 0.00 C ATOM 128 O ILE 70 46.050 38.388 52.898 1.00 0.00 O ATOM 129 N GLY 71 43.979 39.158 53.130 1.00 0.00 N ATOM 130 CA GLY 71 44.127 39.401 54.579 1.00 0.00 C ATOM 131 C GLY 71 42.804 39.136 55.309 1.00 0.00 C ATOM 132 O GLY 71 41.816 38.647 54.735 1.00 0.00 O ATOM 133 N PRO 72 42.737 39.483 56.576 1.00 0.00 N ATOM 134 CA PRO 72 41.583 39.142 57.363 1.00 0.00 C ATOM 135 C PRO 72 40.285 39.733 56.808 1.00 0.00 C ATOM 136 O PRO 72 39.206 39.186 57.086 1.00 0.00 O ATOM 137 N LEU 73 40.364 40.832 56.049 1.00 0.00 N ATOM 138 CA LEU 73 39.167 41.488 55.523 1.00 0.00 C ATOM 139 C LEU 73 38.706 40.882 54.215 1.00 0.00 C ATOM 140 O LEU 73 37.604 41.165 53.770 1.00 0.00 O ATOM 141 N VAL 74 39.579 40.099 53.584 1.00 0.00 N ATOM 142 CA VAL 74 39.252 39.478 52.295 1.00 0.00 C ATOM 143 C VAL 74 39.342 37.944 52.277 1.00 0.00 C ATOM 144 O VAL 74 39.167 37.312 51.235 1.00 0.00 O ATOM 145 N ASN 75 39.579 37.341 53.438 1.00 0.00 N ATOM 146 CA ASN 75 39.612 35.884 53.560 1.00 0.00 C ATOM 147 C ASN 75 38.274 35.290 53.919 1.00 0.00 C ATOM 148 O ASN 75 37.489 35.893 54.634 1.00 0.00 O ATOM 149 N ASN 76 38.071 34.052 53.472 1.00 0.00 N ATOM 150 CA ASN 76 36.933 33.252 53.955 1.00 0.00 C ATOM 151 C ASN 76 37.386 32.518 55.235 1.00 0.00 C ATOM 152 O ASN 76 38.553 32.648 55.630 1.00 0.00 O ATOM 153 N PRO 77 36.501 31.794 55.916 1.00 0.00 N ATOM 154 CA PRO 77 36.831 31.193 57.225 1.00 0.00 C ATOM 155 C PRO 77 37.974 30.206 57.255 1.00 0.00 C ATOM 156 O PRO 77 38.427 29.845 58.346 1.00 0.00 O ATOM 157 N LEU 78 38.443 29.774 56.094 1.00 0.00 N ATOM 158 CA LEU 78 39.496 28.775 56.022 1.00 0.00 C ATOM 159 C LEU 78 40.838 29.366 55.615 1.00 0.00 C ATOM 160 O LEU 78 41.779 28.645 55.329 1.00 0.00 O ATOM 161 N ASN 79 40.926 30.688 55.614 1.00 0.00 N ATOM 162 CA ASN 79 42.201 31.357 55.406 1.00 0.00 C ATOM 163 C ASN 79 42.594 31.610 53.957 1.00 0.00 C ATOM 164 O ASN 79 43.701 32.033 53.693 1.00 0.00 O ATOM 165 N MET 80 41.692 31.328 53.025 1.00 0.00 N ATOM 166 CA MET 80 41.944 31.619 51.625 1.00 0.00 C ATOM 167 C MET 80 41.196 32.871 51.201 1.00 0.00 C ATOM 168 O MET 80 40.201 33.245 51.815 1.00 0.00 O ATOM 169 N VAL 81 41.654 33.496 50.119 1.00 0.00 N ATOM 170 CA VAL 81 40.926 34.619 49.558 1.00 0.00 C ATOM 171 C VAL 81 39.485 34.259 49.272 1.00 0.00 C ATOM 172 O VAL 81 39.215 33.228 48.629 1.00 0.00 O ATOM 173 N HIS 82 38.570 35.096 49.730 1.00 0.00 N ATOM 174 CA HIS 82 37.146 34.886 49.540 1.00 0.00 C ATOM 175 C HIS 82 36.832 35.133 48.062 1.00 0.00 C ATOM 176 O HIS 82 37.210 36.161 47.507 1.00 0.00 O ATOM 177 N GLY 83 36.062 34.245 47.432 1.00 0.00 N ATOM 178 CA GLY 83 35.669 34.406 46.025 1.00 0.00 C ATOM 179 C GLY 83 34.919 35.716 45.809 1.00 0.00 C ATOM 180 O GLY 83 35.057 36.370 44.757 1.00 0.00 O ATOM 181 N GLY 84 34.126 36.129 46.811 1.00 0.00 N ATOM 182 CA GLY 84 33.481 37.425 46.719 1.00 0.00 C ATOM 183 C GLY 84 34.424 38.612 46.709 1.00 0.00 C ATOM 184 O GLY 84 34.122 39.632 46.071 1.00 0.00 O ATOM 185 N ILE 85 35.531 38.510 47.439 1.00 0.00 N ATOM 186 CA ILE 85 36.517 39.587 47.415 1.00 0.00 C ATOM 187 C ILE 85 37.149 39.760 46.032 1.00 0.00 C ATOM 188 O ILE 85 37.323 40.869 45.568 1.00 0.00 O ATOM 189 N THR 86 37.384 38.648 45.343 1.00 0.00 N ATOM 190 CA THR 86 37.868 38.702 43.960 1.00 0.00 C ATOM 191 C THR 86 36.877 39.470 43.101 1.00 0.00 C ATOM 192 O THR 86 37.259 40.264 42.259 1.00 0.00 O ATOM 193 N ALA 87 35.590 39.226 43.310 1.00 0.00 N ATOM 194 CA ALA 87 34.546 39.915 42.532 1.00 0.00 C ATOM 195 C ALA 87 34.452 41.383 42.934 1.00 0.00 C ATOM 196 O ALA 87 34.248 42.253 42.086 1.00 0.00 O ATOM 197 N THR 88 34.615 41.696 44.217 1.00 0.00 N ATOM 198 CA THR 88 34.730 43.103 44.595 1.00 0.00 C ATOM 199 C THR 88 35.868 43.791 43.820 1.00 0.00 C ATOM 200 O THR 88 35.697 44.883 43.277 1.00 0.00 O ATOM 201 N LEU 89 37.016 43.144 43.760 1.00 0.00 N ATOM 202 CA LEU 89 38.156 43.711 43.042 1.00 0.00 C ATOM 203 C LEU 89 37.791 43.908 41.556 1.00 0.00 C ATOM 204 O LEU 89 37.977 45.021 40.983 1.00 0.00 O ATOM 205 N LEU 90 37.232 42.866 40.926 1.00 0.00 N ATOM 206 CA LEU 90 36.892 42.934 39.503 1.00 0.00 C ATOM 207 C LEU 90 35.887 44.042 39.249 1.00 0.00 C ATOM 208 O LEU 90 36.044 44.820 38.285 1.00 0.00 O ATOM 209 N ASP 91 34.826 44.130 40.060 1.00 0.00 N ATOM 210 CA ASP 91 33.800 45.129 39.809 1.00 0.00 C ATOM 211 C ASP 91 34.345 46.523 40.094 1.00 0.00 C ATOM 212 O ASP 91 33.968 47.483 39.414 1.00 0.00 O ATOM 213 N THR 92 35.196 46.672 41.115 1.00 0.00 N ATOM 214 CA THR 92 35.760 48.003 41.432 1.00 0.00 C ATOM 215 C THR 92 36.595 48.534 40.276 1.00 0.00 C ATOM 216 O THR 92 36.546 49.724 39.973 1.00 0.00 O ATOM 217 N ALA 93 37.372 47.664 39.643 1.00 0.00 N ATOM 218 CA ALA 93 38.230 48.060 38.513 1.00 0.00 C ATOM 219 C ALA 93 37.389 48.309 37.279 1.00 0.00 C ATOM 220 O ALA 93 37.500 49.360 36.640 1.00 0.00 O ATOM 221 N MET 94 36.508 47.361 36.948 1.00 0.00 N ATOM 222 CA MET 94 35.685 47.499 35.748 1.00 0.00 C ATOM 223 C MET 94 34.771 48.714 35.792 1.00 0.00 C ATOM 224 O MET 94 34.532 49.352 34.765 1.00 0.00 O ATOM 225 N GLY 95 34.191 49.002 36.956 1.00 0.00 N ATOM 226 CA GLY 95 33.295 50.167 37.045 1.00 0.00 C ATOM 227 C GLY 95 34.013 51.478 36.768 1.00 0.00 C ATOM 228 O GLY 95 33.475 52.335 36.069 1.00 0.00 O ATOM 229 N GLN 96 35.217 51.654 37.320 1.00 0.00 N ATOM 230 CA GLN 96 35.979 52.877 37.069 1.00 0.00 C ATOM 231 C GLN 96 36.476 52.883 35.623 1.00 0.00 C ATOM 232 O GLN 96 36.382 53.907 34.967 1.00 0.00 O ATOM 233 N MET 97 36.922 51.740 35.091 1.00 0.00 N ATOM 234 CA MET 97 37.361 51.709 33.681 1.00 0.00 C ATOM 235 C MET 97 36.214 52.127 32.777 1.00 0.00 C ATOM 236 O MET 97 36.388 52.931 31.831 1.00 0.00 O ATOM 237 N VAL 98 35.023 51.624 33.068 1.00 0.00 N ATOM 238 CA VAL 98 33.832 51.969 32.285 1.00 0.00 C ATOM 239 C VAL 98 33.578 53.471 32.316 1.00 0.00 C ATOM 240 O VAL 98 33.320 54.111 31.267 1.00 0.00 O ATOM 241 N ASN 99 33.601 54.070 33.525 1.00 0.00 N ATOM 242 CA ASN 99 33.412 55.519 33.690 1.00 0.00 C ATOM 243 C ASN 99 34.456 56.293 32.873 1.00 0.00 C ATOM 244 O ASN 99 34.118 57.276 32.191 1.00 0.00 O ATOM 245 N ARG 100 35.704 55.835 32.912 1.00 0.00 N ATOM 246 CA ARG 100 36.779 56.526 32.195 1.00 0.00 C ATOM 247 C ARG 100 36.619 56.468 30.685 1.00 0.00 C ATOM 248 O ARG 100 37.287 57.259 29.978 1.00 0.00 O ATOM 249 N GLN 101 35.718 55.604 30.185 1.00 0.00 N ATOM 250 CA GLN 101 35.436 55.475 28.751 1.00 0.00 C ATOM 251 C GLN 101 34.135 56.188 28.375 1.00 0.00 C ATOM 252 O GLN 101 33.612 55.985 27.270 1.00 0.00 O ATOM 253 N LEU 102 33.610 56.997 29.291 1.00 0.00 N ATOM 254 CA LEU 102 32.462 57.875 28.982 1.00 0.00 C ATOM 255 C LEU 102 32.919 59.322 29.068 1.00 0.00 C ATOM 256 O LEU 102 34.069 59.600 29.447 1.00 0.00 O ATOM 257 N PRO 103 32.023 60.250 28.741 1.00 0.00 N ATOM 258 CA PRO 103 32.415 61.660 28.778 1.00 0.00 C ATOM 259 C PRO 103 31.337 62.569 29.359 1.00 0.00 C ATOM 260 O PRO 103 30.170 62.181 29.458 1.00 0.00 O ATOM 261 N ASP 104 31.738 63.771 29.777 1.00 0.00 N ATOM 262 CA ASP 104 30.824 64.704 30.430 1.00 0.00 C ATOM 263 C ASP 104 30.109 64.116 31.642 1.00 0.00 C ATOM 264 O ASP 104 30.735 63.519 32.498 1.00 0.00 O ATOM 265 N GLY 105 28.800 64.296 31.717 1.00 0.00 N ATOM 266 CA GLY 105 28.040 63.823 32.872 1.00 0.00 C ATOM 267 C GLY 105 27.524 62.386 32.704 1.00 0.00 C ATOM 268 O GLY 105 26.700 61.929 33.500 1.00 0.00 O ATOM 269 N GLN 106 27.958 61.694 31.653 1.00 0.00 N ATOM 270 CA GLN 106 27.638 60.278 31.473 1.00 0.00 C ATOM 271 C GLN 106 28.207 59.471 32.615 1.00 0.00 C ATOM 272 O GLN 106 29.212 59.848 33.248 1.00 0.00 O ATOM 273 N SER 107 27.540 58.364 32.899 1.00 0.00 N ATOM 274 CA SER 107 28.013 57.433 33.909 1.00 0.00 C ATOM 275 C SER 107 27.734 56.017 33.421 1.00 0.00 C ATOM 276 O SER 107 27.087 55.808 32.387 1.00 0.00 O ATOM 277 N ALA 108 28.252 55.040 34.162 1.00 0.00 N ATOM 278 CA ALA 108 27.929 53.639 33.877 1.00 0.00 C ATOM 279 C ALA 108 27.295 52.983 35.080 1.00 0.00 C ATOM 280 O ALA 108 27.590 53.359 36.227 1.00 0.00 O ATOM 281 N VAL 109 26.448 51.993 34.793 1.00 0.00 N ATOM 282 CA VAL 109 25.811 51.190 35.839 1.00 0.00 C ATOM 283 C VAL 109 26.103 49.722 35.523 1.00 0.00 C ATOM 284 O VAL 109 25.947 49.283 34.379 1.00 0.00 O ATOM 285 N THR 110 26.560 48.977 36.522 1.00 0.00 N ATOM 286 CA THR 110 26.778 47.551 36.372 1.00 0.00 C ATOM 287 C THR 110 25.476 46.789 36.223 1.00 0.00 C ATOM 288 O THR 110 24.532 46.988 36.968 1.00 0.00 O ATOM 289 N SER 111 25.406 45.934 35.207 1.00 0.00 N ATOM 290 CA SER 111 24.272 45.052 34.965 1.00 0.00 C ATOM 291 C SER 111 24.502 43.624 35.431 1.00 0.00 C ATOM 292 O SER 111 23.630 43.064 36.071 1.00 0.00 O ATOM 293 N GLU 112 25.639 43.022 35.057 1.00 0.00 N ATOM 294 CA GLU 112 25.848 41.604 35.305 1.00 0.00 C ATOM 295 C GLU 112 27.353 41.466 35.517 1.00 0.00 C ATOM 296 O GLU 112 28.162 42.070 34.821 1.00 0.00 O ATOM 297 N LEU 113 27.730 40.611 36.458 1.00 0.00 N ATOM 298 CA LEU 113 29.115 40.220 36.633 1.00 0.00 C ATOM 299 C LEU 113 29.169 38.712 36.810 1.00 0.00 C ATOM 300 O LEU 113 28.252 38.119 37.414 1.00 0.00 O ATOM 301 N ASN 114 30.210 38.090 36.275 1.00 0.00 N ATOM 302 CA ASN 114 30.379 36.654 36.393 1.00 0.00 C ATOM 303 C ASN 114 31.844 36.347 36.571 1.00 0.00 C ATOM 304 O ASN 114 32.708 37.148 36.169 1.00 0.00 O ATOM 305 N ILE 115 32.150 35.227 37.212 1.00 0.00 N ATOM 306 CA ILE 115 33.538 34.872 37.512 1.00 0.00 C ATOM 307 C ILE 115 33.694 33.400 37.660 1.00 0.00 C ATOM 308 O ILE 115 32.803 32.724 38.219 1.00 0.00 O ATOM 309 N HIS 116 34.836 32.915 37.187 1.00 0.00 N ATOM 310 CA HIS 116 35.294 31.595 37.535 1.00 0.00 C ATOM 311 C HIS 116 36.466 31.629 38.498 1.00 0.00 C ATOM 312 O HIS 116 37.450 32.350 38.261 1.00 0.00 O ATOM 313 N TYR 117 36.388 30.831 39.565 1.00 0.00 N ATOM 314 CA TYR 117 37.461 30.787 40.568 1.00 0.00 C ATOM 315 C TYR 117 38.345 29.589 40.248 1.00 0.00 C ATOM 316 O TYR 117 37.933 28.438 40.405 1.00 0.00 O ATOM 317 N VAL 118 39.542 29.847 39.730 1.00 0.00 N ATOM 318 CA VAL 118 40.386 28.749 39.227 1.00 0.00 C ATOM 319 C VAL 118 41.534 28.339 40.107 1.00 0.00 C ATOM 320 O VAL 118 42.030 27.214 39.982 1.00 0.00 O ATOM 321 N LYS 119 41.966 29.231 40.991 1.00 0.00 N ATOM 322 CA LYS 119 43.033 28.901 41.923 1.00 0.00 C ATOM 323 C LYS 119 42.862 29.737 43.180 1.00 0.00 C ATOM 324 O LYS 119 42.491 30.915 43.111 1.00 0.00 O ATOM 325 N PRO 120 43.118 29.132 44.332 1.00 0.00 N ATOM 326 CA PRO 120 43.057 29.859 45.596 1.00 0.00 C ATOM 327 C PRO 120 44.274 30.726 45.801 1.00 0.00 C ATOM 328 O PRO 120 45.301 30.559 45.129 1.00 0.00 O ATOM 329 N GLY 121 44.146 31.704 46.688 1.00 0.00 N ATOM 330 CA GLY 121 45.288 32.529 47.096 1.00 0.00 C ATOM 331 C GLY 121 45.241 32.638 48.623 1.00 0.00 C ATOM 332 O GLY 121 44.167 32.581 49.209 1.00 0.00 O ATOM 333 N MET 122 46.394 32.792 49.269 1.00 0.00 N ATOM 334 CA MET 122 46.410 32.739 50.722 1.00 0.00 C ATOM 335 C MET 122 47.226 33.832 51.376 1.00 0.00 C ATOM 336 O MET 122 47.163 33.993 52.588 1.00 0.00 O ATOM 337 N GLY 123 47.977 34.581 50.565 1.00 0.00 N ATOM 338 CA GLY 123 48.867 35.607 51.117 1.00 0.00 C ATOM 339 C GLY 123 49.274 36.610 50.059 1.00 0.00 C ATOM 340 O GLY 123 48.924 36.475 48.878 1.00 0.00 O ATOM 341 N THR 124 49.972 37.652 50.496 1.00 0.00 N ATOM 342 CA THR 124 50.374 38.726 49.621 1.00 0.00 C ATOM 343 C THR 124 49.209 39.527 49.086 1.00 0.00 C ATOM 344 O THR 124 48.213 39.714 49.771 1.00 0.00 O ATOM 345 N TYR 125 49.374 40.039 47.873 1.00 0.00 N ATOM 346 CA TYR 125 48.346 40.834 47.217 1.00 0.00 C ATOM 347 C TYR 125 48.042 40.167 45.915 1.00 0.00 C ATOM 348 O TYR 125 48.940 39.630 45.281 1.00 0.00 O ATOM 349 N LEU 126 46.781 40.212 45.516 1.00 0.00 N ATOM 350 CA LEU 126 46.426 39.777 44.161 1.00 0.00 C ATOM 351 C LEU 126 46.243 40.983 43.276 1.00 0.00 C ATOM 352 O LEU 126 46.031 42.080 43.769 1.00 0.00 O ATOM 353 N ARG 127 46.398 40.762 41.973 1.00 0.00 N ATOM 354 CA ARG 127 46.332 41.859 41.006 1.00 0.00 C ATOM 355 C ARG 127 45.252 41.611 39.959 1.00 0.00 C ATOM 356 O ARG 127 45.284 40.580 39.286 1.00 0.00 O ATOM 357 N ALA 128 44.326 42.549 39.826 1.00 0.00 N ATOM 358 CA ALA 128 43.369 42.490 38.731 1.00 0.00 C ATOM 359 C ALA 128 43.834 43.313 37.548 1.00 0.00 C ATOM 360 O ALA 128 44.293 44.458 37.716 1.00 0.00 O ATOM 361 N VAL 129 43.684 42.718 36.375 1.00 0.00 N ATOM 362 CA VAL 129 44.089 43.335 35.118 1.00 0.00 C ATOM 363 C VAL 129 42.817 43.403 34.269 1.00 0.00 C ATOM 364 O VAL 129 42.254 42.364 33.936 1.00 0.00 O ATOM 365 N ALA 130 42.369 44.615 33.956 1.00 0.00 N ATOM 366 CA ALA 130 41.074 44.812 33.303 1.00 0.00 C ATOM 367 C ALA 130 41.324 45.334 31.886 1.00 0.00 C ATOM 368 O ALA 130 42.081 46.308 31.710 1.00 0.00 O ATOM 369 N SER 131 40.688 44.708 30.898 1.00 0.00 N ATOM 370 CA SER 131 40.780 45.149 29.495 1.00 0.00 C ATOM 371 C SER 131 39.345 45.164 28.894 1.00 0.00 C ATOM 372 O SER 131 38.487 44.406 29.322 1.00 0.00 O ATOM 373 N ILE 132 39.072 46.009 27.913 1.00 0.00 N ATOM 374 CA ILE 132 37.738 46.029 27.309 1.00 0.00 C ATOM 375 C ILE 132 37.519 44.856 26.348 1.00 0.00 C ATOM 376 O ILE 132 38.431 44.480 25.601 1.00 0.00 O ATOM 377 N VAL 133 36.313 44.298 26.361 1.00 0.00 N ATOM 378 CA VAL 133 35.863 43.378 25.306 1.00 0.00 C ATOM 379 C VAL 133 34.946 44.130 24.352 1.00 0.00 C ATOM 380 O VAL 133 34.877 43.782 23.160 1.00 0.00 O ATOM 381 N HIS 134 34.253 45.161 24.851 1.00 0.00 N ATOM 382 CA HIS 134 33.309 45.928 24.029 1.00 0.00 C ATOM 383 C HIS 134 33.147 47.299 24.641 1.00 0.00 C ATOM 384 O HIS 134 32.832 47.412 25.827 1.00 0.00 O ATOM 385 N GLN 135 33.303 48.334 23.817 1.00 0.00 N ATOM 386 CA GLN 135 33.032 49.697 24.233 1.00 0.00 C ATOM 387 C GLN 135 32.046 50.271 23.258 1.00 0.00 C ATOM 388 O GLN 135 32.445 50.841 22.240 1.00 0.00 O ATOM 389 N GLY 136 30.771 50.123 23.580 1.00 0.00 N ATOM 390 CA GLY 136 29.685 50.516 22.700 1.00 0.00 C ATOM 391 C GLY 136 29.148 51.869 23.102 1.00 0.00 C ATOM 392 O GLY 136 29.607 52.503 24.078 1.00 0.00 O ATOM 393 N LYS 137 28.148 52.330 22.345 1.00 0.00 N ATOM 394 CA LYS 137 27.494 53.602 22.688 1.00 0.00 C ATOM 395 C LYS 137 26.501 53.430 23.820 1.00 0.00 C ATOM 396 O LYS 137 26.158 54.403 24.495 1.00 0.00 O ATOM 397 N GLN 138 26.066 52.184 24.048 1.00 0.00 N ATOM 398 CA GLN 138 25.003 51.921 25.019 1.00 0.00 C ATOM 399 C GLN 138 25.434 50.972 26.155 1.00 0.00 C ATOM 400 O GLN 138 24.874 51.032 27.246 1.00 0.00 O ATOM 401 N ARG 139 26.398 50.104 25.870 1.00 0.00 N ATOM 402 CA ARG 139 26.854 49.086 26.825 1.00 0.00 C ATOM 403 C ARG 139 28.346 48.913 26.698 1.00 0.00 C ATOM 404 O ARG 139 28.943 49.232 25.657 1.00 0.00 O ATOM 405 N ILE 140 28.952 48.324 27.735 1.00 0.00 N ATOM 406 CA ILE 140 30.358 47.941 27.694 1.00 0.00 C ATOM 407 C ILE 140 30.480 46.542 28.277 1.00 0.00 C ATOM 408 O ILE 140 29.662 46.120 29.111 1.00 0.00 O ATOM 409 N VAL 141 31.520 45.847 27.865 1.00 0.00 N ATOM 410 CA VAL 141 31.890 44.595 28.502 1.00 0.00 C ATOM 411 C VAL 141 33.373 44.635 28.807 1.00 0.00 C ATOM 412 O VAL 141 34.186 44.964 27.934 1.00 0.00 O ATOM 413 N VAL 142 33.708 44.325 30.063 1.00 0.00 N ATOM 414 CA VAL 142 35.073 44.371 30.565 1.00 0.00 C ATOM 415 C VAL 142 35.475 42.961 30.984 1.00 0.00 C ATOM 416 O VAL 142 34.654 42.239 31.584 1.00 0.00 O ATOM 417 N GLU 143 36.720 42.576 30.705 1.00 0.00 N ATOM 418 CA GLU 143 37.268 41.319 31.212 1.00 0.00 C ATOM 419 C GLU 143 38.283 41.674 32.297 1.00 0.00 C ATOM 420 O GLU 143 39.211 42.491 32.081 1.00 0.00 O ATOM 421 N GLY 144 38.136 41.071 33.481 1.00 0.00 N ATOM 422 CA GLY 144 39.115 41.291 34.523 1.00 0.00 C ATOM 423 C GLY 144 39.683 39.936 34.947 1.00 0.00 C ATOM 424 O GLY 144 38.942 39.041 35.393 1.00 0.00 O ATOM 425 N LYS 145 41.007 39.786 34.813 1.00 0.00 N ATOM 426 CA LYS 145 41.682 38.577 35.269 1.00 0.00 C ATOM 427 C LYS 145 42.463 38.929 36.533 1.00 0.00 C ATOM 428 O LYS 145 43.103 39.992 36.608 1.00 0.00 O ATOM 429 N VAL 146 42.400 38.042 37.531 1.00 0.00 N ATOM 430 CA VAL 146 43.048 38.325 38.811 1.00 0.00 C ATOM 431 C VAL 146 44.104 37.273 39.034 1.00 0.00 C ATOM 432 O VAL 146 43.842 36.076 38.951 1.00 0.00 O ATOM 433 N TYR 147 45.318 37.729 39.321 1.00 0.00 N ATOM 434 CA TYR 147 46.510 36.882 39.439 1.00 0.00 C ATOM 435 C TYR 147 47.097 37.005 40.839 1.00 0.00 C ATOM 436 O TYR 147 46.997 38.043 41.499 1.00 0.00 O ATOM 437 N THR 148 47.738 35.942 41.296 1.00 0.00 N ATOM 438 CA THR 148 48.504 36.014 42.545 1.00 0.00 C ATOM 439 C THR 148 49.900 36.582 42.289 1.00 0.00 C ATOM 440 O THR 148 50.249 36.924 41.163 1.00 0.00 O ATOM 441 N ASP 149 50.713 36.678 43.352 1.00 0.00 N ATOM 442 CA ASP 149 52.036 37.307 43.242 1.00 0.00 C ATOM 443 C ASP 149 53.018 36.571 42.339 1.00 0.00 C ATOM 444 O ASP 149 53.992 37.169 41.852 1.00 0.00 O ATOM 445 N GLN 150 52.754 35.290 42.095 1.00 0.00 N ATOM 446 CA GLN 150 53.548 34.480 41.185 1.00 0.00 C ATOM 447 C GLN 150 53.045 34.523 39.743 1.00 0.00 C ATOM 448 O GLN 150 53.544 33.784 38.890 1.00 0.00 O ATOM 449 N GLY 151 52.025 35.349 39.480 1.00 0.00 N ATOM 450 CA GLY 151 51.521 35.523 38.134 1.00 0.00 C ATOM 451 C GLY 151 50.542 34.438 37.715 1.00 0.00 C ATOM 452 O GLY 151 50.209 34.306 36.538 1.00 0.00 O ATOM 453 N GLU 152 50.085 33.630 38.672 1.00 0.00 N ATOM 454 CA GLU 152 49.117 32.572 38.359 1.00 0.00 C ATOM 455 C GLU 152 47.680 33.103 38.399 1.00 0.00 C ATOM 456 O GLU 152 47.273 33.808 39.320 1.00 0.00 O ATOM 457 N THR 153 46.912 32.747 37.382 1.00 0.00 N ATOM 458 CA THR 153 45.509 33.141 37.308 1.00 0.00 C ATOM 459 C THR 153 44.723 32.511 38.435 1.00 0.00 C ATOM 460 O THR 153 44.773 31.295 38.638 1.00 0.00 O ATOM 461 N VAL 154 44.023 33.345 39.183 1.00 0.00 N ATOM 462 CA VAL 154 43.193 32.834 40.263 1.00 0.00 C ATOM 463 C VAL 154 41.700 33.014 39.987 1.00 0.00 C ATOM 464 O VAL 154 40.883 32.261 40.488 1.00 0.00 O ATOM 465 N ALA 155 41.324 34.067 39.263 1.00 0.00 N ATOM 466 CA ALA 155 39.907 34.301 38.994 1.00 0.00 C ATOM 467 C ALA 155 39.807 34.986 37.617 1.00 0.00 C ATOM 468 O ALA 155 40.581 35.892 37.322 1.00 0.00 O ATOM 469 N MET 156 38.840 34.570 36.789 1.00 0.00 N ATOM 470 CA MET 156 38.614 35.247 35.521 1.00 0.00 C ATOM 471 C MET 156 37.163 35.714 35.509 1.00 0.00 C ATOM 472 O MET 156 36.248 34.916 35.713 1.00 0.00 O ATOM 473 N GLY 157 36.949 36.994 35.257 1.00 0.00 N ATOM 474 CA GLY 157 35.648 37.614 35.408 1.00 0.00 C ATOM 475 C GLY 157 35.299 38.468 34.198 1.00 0.00 C ATOM 476 O GLY 157 36.184 38.899 33.442 1.00 0.00 O ATOM 477 N THR 158 34.001 38.665 34.001 1.00 0.00 N ATOM 478 CA THR 158 33.486 39.621 33.022 1.00 0.00 C ATOM 479 C THR 158 32.407 40.499 33.660 1.00 0.00 C ATOM 480 O THR 158 31.606 39.987 34.430 1.00 0.00 O ATOM 481 N GLY 159 32.385 41.808 33.334 1.00 0.00 N ATOM 482 CA GLY 159 31.412 42.770 33.809 1.00 0.00 C ATOM 483 C GLY 159 30.759 43.414 32.614 1.00 0.00 C ATOM 484 O GLY 159 31.457 43.884 31.709 1.00 0.00 O ATOM 485 N SER 160 29.428 43.431 32.602 1.00 0.00 N ATOM 486 CA SER 160 28.648 44.169 31.625 1.00 0.00 C ATOM 487 C SER 160 28.076 45.409 32.256 1.00 0.00 C ATOM 488 O SER 160 27.441 45.293 33.310 1.00 0.00 O ATOM 489 N PHE 161 28.262 46.572 31.606 1.00 0.00 N ATOM 490 CA PHE 161 27.682 47.834 32.096 1.00 0.00 C ATOM 491 C PHE 161 26.784 48.442 31.057 1.00 0.00 C ATOM 492 O PHE 161 26.905 48.162 29.861 1.00 0.00 O ATOM 493 N PHE 162 25.875 49.265 31.535 1.00 0.00 N ATOM 494 CA PHE 162 25.111 50.163 30.659 1.00 0.00 C ATOM 495 C PHE 162 25.608 51.592 30.835 1.00 0.00 C ATOM 496 O PHE 162 25.928 52.021 31.944 1.00 0.00 O ATOM 497 N VAL 163 25.639 52.323 29.727 1.00 0.00 N ATOM 498 CA VAL 163 25.966 53.738 29.781 1.00 0.00 C ATOM 499 C VAL 163 24.697 54.552 30.022 1.00 0.00 C ATOM 500 O VAL 163 23.674 54.295 29.400 1.00 0.00 O ATOM 501 N LEU 164 24.764 55.485 30.977 1.00 0.00 N ATOM 502 CA LEU 164 23.641 56.365 31.315 1.00 0.00 C ATOM 503 C LEU 164 23.999 57.800 30.962 1.00 0.00 C ATOM 504 O LEU 164 25.126 58.272 31.253 1.00 0.00 O END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 455 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 37.61 82.5 212 95.1 223 ARMSMC SECONDARY STRUCTURE . . 37.09 82.1 123 93.9 131 ARMSMC SURFACE . . . . . . . . 42.72 76.2 143 97.3 147 ARMSMC BURIED . . . . . . . . 23.74 95.7 69 90.8 76 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 79 ARMSSC1 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 68 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 48 ARMSSC1 SURFACE . . . . . . . . 0.00 0.0 0 0.0 56 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 23 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 37 ARMSSC2 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 26 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 21 ARMSSC2 SURFACE . . . . . . . . 0.00 0.0 0 0.0 28 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 9 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 10 ARMSSC3 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 7 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 6 ARMSSC3 SURFACE . . . . . . . . 0.00 0.0 0 0.0 8 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 2 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 0 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC4 SURFACE . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 1.28 (Number of atoms: 114) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 1.28 114 100.0 114 CRMSCA CRN = ALL/NP . . . . . 0.0112 CRMSCA SECONDARY STRUCTURE . . 1.00 67 100.0 67 CRMSCA SURFACE . . . . . . . . 1.39 75 100.0 75 CRMSCA BURIED . . . . . . . . 1.02 39 100.0 39 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 1.27 455 81.7 557 CRMSMC SECONDARY STRUCTURE . . 0.98 268 81.5 329 CRMSMC SURFACE . . . . . . . . 1.39 300 81.3 369 CRMSMC BURIED . . . . . . . . 0.98 155 82.4 188 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 0.00 0 0.0 406 CRMSSC RELIABLE SIDE CHAINS . 0.00 0 0.0 320 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 244 CRMSSC SURFACE . . . . . . . . 0.00 0 0.0 300 CRMSSC BURIED . . . . . . . . 0.00 0 0.0 106 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 1.27 455 52.8 861 CRMSALL SECONDARY STRUCTURE . . 0.98 268 52.3 512 CRMSALL SURFACE . . . . . . . . 1.39 300 50.0 600 CRMSALL BURIED . . . . . . . . 0.98 155 59.4 261 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.070 1.000 0.500 114 100.0 114 ERRCA SECONDARY STRUCTURE . . 0.923 1.000 0.500 67 100.0 67 ERRCA SURFACE . . . . . . . . 1.141 1.000 0.500 75 100.0 75 ERRCA BURIED . . . . . . . . 0.933 1.000 0.500 39 100.0 39 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.060 1.000 0.500 455 81.7 557 ERRMC SECONDARY STRUCTURE . . 0.899 1.000 0.500 268 81.5 329 ERRMC SURFACE . . . . . . . . 1.145 1.000 0.500 300 81.3 369 ERRMC BURIED . . . . . . . . 0.898 1.000 0.500 155 82.4 188 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 0.000 0.000 0.000 0 0.0 406 ERRSC RELIABLE SIDE CHAINS . 0.000 0.000 0.000 0 0.0 320 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 244 ERRSC SURFACE . . . . . . . . 0.000 0.000 0.000 0 0.0 300 ERRSC BURIED . . . . . . . . 0.000 0.000 0.000 0 0.0 106 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.060 1.000 0.500 455 52.8 861 ERRALL SECONDARY STRUCTURE . . 0.899 1.000 0.500 268 52.3 512 ERRALL SURFACE . . . . . . . . 1.145 1.000 0.500 300 50.0 600 ERRALL BURIED . . . . . . . . 0.898 1.000 0.500 155 59.4 261 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 69 105 110 114 114 114 114 DISTCA CA (P) 60.53 92.11 96.49 100.00 100.00 114 DISTCA CA (RMS) 0.71 0.97 1.09 1.28 1.28 DISTCA ALL (N) 269 424 441 454 455 455 861 DISTALL ALL (P) 31.24 49.25 51.22 52.73 52.85 861 DISTALL ALL (RMS) 0.71 0.99 1.08 1.24 1.27 DISTALL END of the results output